Citrus Sinensis ID: 022625

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290----
Protein Sequence
MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLCEQLK
Secondary Structure (PSIPRED)
cccccccccEEEcccccEEEccccccccccccccEEEccccEEEEEcccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEEcccccccccccccEEEEEEcccHHHHHHHHccccEEEEccccccccccccccccEEEEEEEEEcccccccHHHHHcHHHHHHHHHHHHHHHHccccEEEEccccccccccccccEEEcccccccccccHHHHHHHHHHHcccccccccEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEcccEEEccccccccccccccEEEccccEEEEEEcccccccHHHHHHHHHHcccHHHHHcccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEccHHHHHHHccccEEEEEEccccHHHHHHHHccccEEEEccccHHHHHHHHccccEEEEEEEEEcccccccccHcccHHHHHHHHHHHHHHHHccccEEEEEccccccccccccEEEEcccccccccccHHHHHHHHHHHHHccccccEEEEEEEcccccHccc
Coil and Loop (DISEMBL)
magtafpstlVIQTshisftsqkksfelanpsslifNFEKKVLFRCSAKKKISFVDQILDYIeggpklrkwygapdllpkdgsneedeekedefpeeardavlvtdgdsdigQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRsiicpsegfisnagslkgVQHVILLSQLSvyrgsggiqALMKGNARKLAEQDESMLmasgipytiirtgvlqntpggkqgfqfeegcaangslskEDAAFICVEALesipqtgliFEVCEISNLCEQLK
Flexible Loop (DISEMBL)
magtafpstlviqtSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEkedefpeeardavlvtdgdsdigQMVILSLIVKRTRIKALVKDKRNAMESFGTYvesmagdasnKKFLKTALRGVRSIICPSEGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLCEQLK
Low Complexity Region (SEG)
MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPDLLPKDGSNeedeekedefpeeARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLCEQLK
Disordered region (IsUnstruct)
*********LVIQTSHISFT*****FELANPSSLIFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAP**************************VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN**********MLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLC****
Disordered Region (DISOPRED)
****A*P*TLV*******************************************VDQILDYIEGGPKLRKW******************************VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA*ESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS*******
Disordered Region (DISEMBL)
MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPDLLPKD****************ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLCEQLK
Disordered Region (DISPRO)
****AFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPD********************EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLC****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLCEQLK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	294	2.2.26 [Sep-21-2011]
P49534	319	Uncharacterized protein y	N/A	no	0.622	0.573	0.244	9e-05

>sp|P49534|YCF39_ODOSI Uncharacterized protein ycf39 OS=Odontella sinensis GN=ycf39 PE=3 SV=1

 Score = 47.8 bits (112), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 46/229 (20%)

Query: 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NAMESFGTYVESMAGDASNKKFLK 158
           ++L+  G   +G+ V+L  + K  +++ LV++ R  N ++ +G   E + GD S  + + 
Sbjct: 2   SLLIIGGTGTLGRQVVLQALTKGYQVRCLVRNFRKANFLKEWGA--ELIYGDLSRPETIP 59

Query: 159 TALRGVRSIICPSEGFISNAGSLKGVQH-----VILLSQLS-----VYRGSGGIQALMKG 208
             L+G+ ++I  S    S+  +LK V       +I  +Q +     V+  S  ++  +  
Sbjct: 60  PCLQGITAVIDTSTSRPSDLDTLKQVDWDGKCALIEAAQAANVKHFVFCSSQNVEQFLNI 119

Query: 209 NARKLAEQDESMLMASGIPYTIIRTG-------------VLQNTPGGKQGFQFEEGCAAN 255
              ++    E+ L  S IPYT+ R               VL+N P        E  C + 
Sbjct: 120 PLMEMKFGIETKLQQSNIPYTVFRLAGFYQGLIEQYAIPVLENLPILVTN---ENTCVS- 175

Query: 256 GSLSKEDAAFICVEALESIPQT-----------GLIFEVCEISNLCEQL 293
             +  +D A  C+ +L+ +P+T           G +    EI NLCEQL
Sbjct: 176 -YMDTQDIAKFCLRSLQ-LPETKNRTFVLGGQKGWV--SSEIINLCEQL 220

Odontella sinensis (taxid: 2839)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	294
224073720	306	predicted protein [Populus trichocarpa]	0.965	0.928	0.718	1e-113
225442154	303	PREDICTED: uncharacterized protein LOC10	0.935	0.907	0.698	1e-107
255560651	302	conserved hypothetical protein [Ricinus	0.945	0.920	0.707	1e-105
356561047	312	PREDICTED: uncharacterized protein LOC10	0.959	0.903	0.660	1e-103
356522384	316	PREDICTED: uncharacterized protein LOC10	0.938	0.873	0.648	1e-100
79378061	312	Rossmann-fold NAD(P)-binding domain-cont	0.955	0.900	0.622	1e-94
37991868	310	expressed protein [Oryza sativa Japonica	0.846	0.803	0.670	7e-92
297842009	311	hypothetical protein ARALYDRAFT_476397 [	0.945	0.893	0.608	7e-92
218193028	308	hypothetical protein OsI_12007 [Oryza sa	0.843	0.805	0.669	1e-91
79321173	311	Rossmann-fold NAD(P)-binding domain-cont	0.959	0.906	0.613	3e-91

>gi|224073720|ref|XP_002304142.1| predicted protein [Populus trichocarpa] gi|222841574|gb|EEE79121.1| predicted protein [Populus trichocarpa]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 214/298 (71%), Positives = 242/298 (81%), Gaps = 14/298 (4%)

Query: 4   TAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILDYIE 63
           TA PST   QTS  +F SQ    ++ +PS LIF  +   L RCSAKKKISFVDQILDYIE
Sbjct: 3   TALPSTAFCQTS-FTFPSQNPC-KVKSPS-LIFRTKSHGLIRCSAKKKISFVDQILDYIE 59

Query: 64  GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFP----EEARDAVLVTDGDSDIGQMVILSL 119
           GGPKLRKWYGAPDLLPKDGS+ EDE   DE P     E RDAVLVTDGDS+IGQM+ILSL
Sbjct: 60  GGPKLRKWYGAPDLLPKDGSDTEDE---DELPGNALNEVRDAVLVTDGDSEIGQMIILSL 116

Query: 120 IVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAG 179
           IVK+ R+KALVKDKR AME+FGTYVESMAGDAS+K FLK ALRGVR+IICP+EGF+SN G
Sbjct: 117 IVKKARVKALVKDKRTAMEAFGTYVESMAGDASSKPFLKKALRGVRAIICPNEGFLSNGG 176

Query: 180 SLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT 239
            L+GV+HVILLSQLSVYRGSGGIQALMK NARKLAE+DES L+ASGIPYTIIR G+LQ+T
Sbjct: 177 DLQGVKHVILLSQLSVYRGSGGIQALMKNNARKLAEKDESTLVASGIPYTIIRVGMLQDT 236

Query: 240 PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVC----EISNLCEQL 293
           PGG QGF FE+G A  GSLSKEDAAFICVEAL+ +PQ G  FE      ++S+  E+L
Sbjct: 237 PGGTQGFSFEKGSAEKGSLSKEDAAFICVEALDVVPQIGFTFEAVNGEEKVSDWKERL 294

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442154|ref|XP_002274144.1| PREDICTED: uncharacterized protein LOC100246327 [Vitis vinifera] gi|297743019|emb|CBI35886.3| unnamed protein product [Vitis vinifera]

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 199/285 (69%), Positives = 233/285 (81%), Gaps = 10/285 (3%)

Query: 1   MAGTAFPSTLVIQTSHIS-FTSQKKSFELANPSSLIFNFEKK-VLFRCSAKKKISFVDQI 58
           MAG   P        H S F S + S  +   SS +F  ++   L  CSAKKK  FVDQI
Sbjct: 1   MAGYLLPY-------HTSLFLSSQNSHRITATSSFLFKIDRPGSLVCCSAKKKAGFVDQI 53

Query: 59  LDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVILS 118
           LDYIEGGPKLRKWYGAPDLLPKDGS+ E++++  E  EE RDAVLVTDGDS+IGQMVILS
Sbjct: 54  LDYIEGGPKLRKWYGAPDLLPKDGSSVEEDDESAEV-EEDRDAVLVTDGDSEIGQMVILS 112

Query: 119 LIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNA 178
           LIVKR+RIKALVKDKR AME+FGTYVESMAGDA++K F + ALRGVR+IICP+EG ISN 
Sbjct: 113 LIVKRSRIKALVKDKRAAMEAFGTYVESMAGDANDKSFQRKALRGVRTIICPNEGSISNF 172

Query: 179 GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 238
           GSL GVQH+ILLSQLS YRG+GGIQALM+GNARKLAE+DES++  SGIPYTIIR G+LQN
Sbjct: 173 GSLMGVQHIILLSQLSAYRGTGGIQALMQGNARKLAEKDESIVTGSGIPYTIIRAGLLQN 232

Query: 239 TPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEV 283
           +PGGK+GF F+EG AA G LSKEDAAFICVEA++++P+TGL+FEV
Sbjct: 233 SPGGKEGFSFKEGVAATGRLSKEDAAFICVEAVDTVPETGLVFEV 277

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560651|ref|XP_002521339.1| conserved hypothetical protein [Ricinus communis] gi|223539417|gb|EEF41007.1| conserved hypothetical protein [Ricinus communis]

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/284 (70%), Positives = 232/284 (81%), Gaps = 6/284 (2%)

Query: 1   MAGTAFPSTLVIQTS-HISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQIL 59
           MAGT F S L+ Q+   +S+ +Q KS +    S +      + L  CSAKKKI F+DQIL
Sbjct: 1   MAGT-FSSILLWQSCLSLSYQNQSKSLDF---SPIFHTTNNRSLVHCSAKKKIGFMDQIL 56

Query: 60  DYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVILSL 119
           DYIEGGPKLRKWYGAPDLLPKDGS  +DE++  E  EE RDA+LVTDGDS+IGQMVILSL
Sbjct: 57  DYIEGGPKLRKWYGAPDLLPKDGSTMQDEDEFSE-EEEVRDAILVTDGDSEIGQMVILSL 115

Query: 120 IVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAG 179
           IVKR ++KALVKDKR+AME+FGTYVESMAGD S+  F+K ALRGVR+IICP EGF+S+ G
Sbjct: 116 IVKRAKVKALVKDKRSAMEAFGTYVESMAGDTSSMLFIKKALRGVRAIICPKEGFLSSVG 175

Query: 180 SLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT 239
           SLKGV+HVILLSQLSVYRGS GI+A+MK NARKL EQDES L+ASGIP TIIR G+LQNT
Sbjct: 176 SLKGVKHVILLSQLSVYRGSSGIEAMMKSNARKLTEQDESALVASGIPCTIIRVGMLQNT 235

Query: 240 PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEV 283
           PGG QGF FE+GCA  GSLSKEDAAFICVEALE++PQ   IFEV
Sbjct: 236 PGGTQGFNFEKGCAEKGSLSKEDAAFICVEALETVPQAEFIFEV 279

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356561047|ref|XP_003548797.1| PREDICTED: uncharacterized protein LOC100806043 [Glycine max]

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/292 (66%), Positives = 230/292 (78%), Gaps = 10/292 (3%)

Query: 8   STLVIQTSHISFTSQKKSFELANPSSLIFNFEKKV----LFRCSAKKKISFVDQILDYIE 63
           STL  Q S +  TSQ+     A  SS  FN E       L  C AKKK+SF++QILDYIE
Sbjct: 11  STLPFQKS-VPLTSQRSG--TAFGSSFQFNRENGTVVTPLVVCHAKKKLSFMEQILDYIE 67

Query: 64  GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPE-EARDAVLVTDGDSDIGQMVILSLIVK 122
           GGPKLRKWYGAPD+L KDG+  ED   ED++PE E RDAVLVTDGDS++GQMVILSLIVK
Sbjct: 68  GGPKLRKWYGAPDILEKDGTAIED--NEDDYPEDEVRDAVLVTDGDSEMGQMVILSLIVK 125

Query: 123 RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAGSLK 182
           + R+K LVKDKR A+E+FG+YVESMAGD S+K+F+K ALRGVR+IICP+EGF+S+ GSL+
Sbjct: 126 KARVKTLVKDKRVALEAFGSYVESMAGDTSDKRFVKKALRGVRTIICPNEGFLSSVGSLQ 185

Query: 183 GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG 242
           GVQHVI+LS+LSVY G  G Q++MK NA+KLAEQDES+L  SGIPYTIIRTG LQ+TPGG
Sbjct: 186 GVQHVIVLSRLSVYGGQSGFQSMMKSNAKKLAEQDESVLKTSGIPYTIIRTGALQDTPGG 245

Query: 243 KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLCEQLK 294
           KQGF F+EGCAA+GS+SKEDAAF+CV A + +PQTG IFEV    N     K
Sbjct: 246 KQGFTFDEGCAASGSISKEDAAFVCVAAFDCVPQTGFIFEVANGDNKVSDWK 297

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522384|ref|XP_003529826.1| PREDICTED: uncharacterized protein LOC100801216 [Glycine max]

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/290 (64%), Positives = 226/290 (77%), Gaps = 14/290 (4%)

Query: 8   STLVIQTSHISFTSQKKSFELANPSSLIFNFEK----KVLFRCSAKKKISFVDQILDYIE 63
           STL  Q S +   SQ+        SS +F+ E       L  C AKKK+SF++QILDYIE
Sbjct: 11  STLSFQKS-VPLNSQRSGTSFG--SSFLFSRENGSVVPSLVVCHAKKKLSFMEQILDYIE 67

Query: 64  GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFP-----EEARDAVLVTDGDSDIGQMVILS 118
           GGPKLRKWYGAPD+L KDG+  ED+E  D++P     +E RDAVLVTDGDS+ GQMVILS
Sbjct: 68  GGPKLRKWYGAPDILEKDGTAIEDDE--DDYPGEQIEDEVRDAVLVTDGDSETGQMVILS 125

Query: 119 LIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNA 178
           LIVK+ R+K LVKDKR A+E+FG+YVESMAGD S+K+FLK ALRGVR+IICP+EGF+S+ 
Sbjct: 126 LIVKKARVKTLVKDKRVALEAFGSYVESMAGDTSDKRFLKKALRGVRTIICPNEGFLSSV 185

Query: 179 GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 238
           GSL+GVQHVI+LSQLSVY G  G Q++MK NA+KLAEQDES+L  SGIPYTIIRTG L +
Sbjct: 186 GSLQGVQHVIVLSQLSVYGGKSGFQSMMKSNAKKLAEQDESVLKTSGIPYTIIRTGALLD 245

Query: 239 TPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISN 288
            PGGK+GF F+EGCAA GS+SKEDAAF+CV AL+ +PQTG IFEV    N
Sbjct: 246 APGGKRGFTFDEGCAARGSISKEDAAFVCVAALDCVPQTGFIFEVANGDN 295

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79378061|ref|NP_177408.3| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|44917555|gb|AAS49102.1| At1g72640 [Arabidopsis thaliana] gi|332197230|gb|AEE35351.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  352 bits (903), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 180/289 (62%), Positives = 216/289 (74%), Gaps = 8/289 (2%)

Query: 1   MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
           MAGT+ PS L+ Q   + F+S  +  E AN   +     K+ L RC AKKKISFVDQILD
Sbjct: 1   MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59

Query: 61  YIEGGPKLRKWYGAPDLLPKDGSNEED------EEKEDEFPEEARDAVLVTDGDSDIGQM 114
           YIEGGPKLRKWYGAP+L PKDGS   D      EEKED+   E +D V VTDGDSD+GQM
Sbjct: 60  YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEAEEKEDDLDGE-KDVVFVTDGDSDLGQM 118

Query: 115 VILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174
           +IL LIVK TR+KALVKDKR A+E+FG+YVE   GDAS+++FLK A +GV ++I P+EGF
Sbjct: 119 IILQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGF 178

Query: 175 ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTG 234
           +S   S +GV+H +LLSQLSVY  SGGIQA+M   A+KLAEQDE+  ++S +PYTIIRTG
Sbjct: 179 LSIVKSFRGVKHAVLLSQLSVYESSGGIQAMMNSKAKKLAEQDENAAISSNVPYTIIRTG 238

Query: 235 VLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEV 283
            L+N+PGG QGF F  G AA GS+SKEDAA ICVEAL  IP TGLIFEV
Sbjct: 239 KLENSPGGSQGFNFSAGAAAKGSISKEDAARICVEALSVIPPTGLIFEV 287

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|37991868|gb|AAR06314.1| expressed protein [Oryza sativa Japonica Group] gi|108708765|gb|ABF96560.1| expressed protein [Oryza sativa Japonica Group]

 Score =  343 bits (879), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 169/252 (67%), Positives = 203/252 (80%), Gaps = 3/252 (1%)

Query: 35  IFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEF 94
           +FN    V+ R  +K + SF D+ILDYIEGGPKLR+WYGAPDLLPKDGS E+ E++  E 
Sbjct: 38  LFNAATAVVVRSRSKDEASFTDRILDYIEGGPKLRRWYGAPDLLPKDGSAEDGEDEPSEI 97

Query: 95  P-EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN 153
             EE RDAVLVT+GDS+IGQMVILSLI+KR RIKALVKD+R+  E+FGTYVE M G+  +
Sbjct: 98  DIEEPRDAVLVTNGDSEIGQMVILSLILKRARIKALVKDRRSTEEAFGTYVECMVGNMED 157

Query: 154 KKFLKTALRGVRSIICPSE-GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212
           K F K ALRGVR+IICP++ GF S+   LKGVQH++LLSQLSVYRGSGG+QA+M    RK
Sbjct: 158 KSFTKKALRGVRAIICPADDGFFSDL-DLKGVQHIVLLSQLSVYRGSGGLQAIMNSKLRK 216

Query: 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALE 272
           LAE+DE +++ASGIP TIIRTG +Q+TPGG +GF F EG AA G +SKEDAA ICVEAL+
Sbjct: 217 LAERDEEVVLASGIPSTIIRTGSMQSTPGGDRGFDFTEGAAAKGRMSKEDAATICVEALD 276

Query: 273 SIPQTGLIFEVC 284
           SIPQT LIFEV 
Sbjct: 277 SIPQTTLIFEVA 288

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842009|ref|XP_002888886.1| hypothetical protein ARALYDRAFT_476397 [Arabidopsis lyrata subsp. lyrata] gi|297334727|gb|EFH65145.1| hypothetical protein ARALYDRAFT_476397 [Arabidopsis lyrata subsp. lyrata]

 Score =  343 bits (879), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 177/291 (60%), Positives = 215/291 (73%), Gaps = 13/291 (4%)

Query: 1   MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
           MAGT+ PS L+ Q   + F S  +  E      +  +  K+   RC AKKKISFVDQILD
Sbjct: 1   MAGTSLPSCLLSQGPSLLFCSSNQVSE--TKCRIGISSGKRCRVRCLAKKKISFVDQILD 58

Query: 61  YIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEF-PEEARD-------AVLVTDGDSDIG 112
           YIEGGPKLRKWYGAP+L PKDGS   D+   DEF  EEA+D        V VTDGDSD+G
Sbjct: 59  YIEGGPKLRKWYGAPELRPKDGSLSGDD---DEFEAEEAKDDLDGENDVVFVTDGDSDLG 115

Query: 113 QMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172
           QM+IL LIVK TR+KALVKDKR A+E+FG+YVE  +GDAS+++FLK A +GV ++I P+E
Sbjct: 116 QMIILQLIVKGTRVKALVKDKRKALEAFGSYVELTSGDASDERFLKKAFKGVGAVISPTE 175

Query: 173 GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIR 232
           GF+ N  S +GV+H +LLSQLSVY  SGGIQA+M   A+KLAEQDE+ +++S +PYTIIR
Sbjct: 176 GFLPNVKSFRGVKHAVLLSQLSVYESSGGIQAMMNNKAKKLAEQDENAVISSNVPYTIIR 235

Query: 233 TGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEV 283
           TG L+N+PGG QGF F  G AA GS+SKEDAA ICVEAL  IP TGLIFEV
Sbjct: 236 TGKLENSPGGNQGFNFNAGAAAKGSISKEDAARICVEALSVIPPTGLIFEV 286

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218193028|gb|EEC75455.1| hypothetical protein OsI_12007 [Oryza sativa Indica Group]

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 168/251 (66%), Positives = 203/251 (80%), Gaps = 3/251 (1%)

Query: 35  IFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEF 94
           +FN    V+ R  +K + SF D+ILDYIEGGPKLR+WYGAPDLLPKDGS E+ E++  + 
Sbjct: 38  LFNAATAVVVRSRSKDEASFTDRILDYIEGGPKLRRWYGAPDLLPKDGSAEDGEDEPSDI 97

Query: 95  PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK 154
            EE RDAVLVT+GDS+IGQMVILSLI+KR RIKALVKD+R+  E+FGTYVE M G+  +K
Sbjct: 98  -EEPRDAVLVTNGDSEIGQMVILSLILKRARIKALVKDRRSTEEAFGTYVECMVGNMEDK 156

Query: 155 KFLKTALRGVRSIICPSE-GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213
            F K ALRGVR+IICP++ GF S+   LKGVQH++LLSQLSVYRGSGG+QA+M    RKL
Sbjct: 157 SFTKKALRGVRAIICPADDGFFSDL-DLKGVQHIVLLSQLSVYRGSGGLQAIMNSKLRKL 215

Query: 214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES 273
           AE+DE +++ASGIP TIIRTG +Q+TPGG +GF F EG AA G +SKEDAA ICVEAL+S
Sbjct: 216 AERDEEVVLASGIPSTIIRTGSMQSTPGGDRGFDFTEGAAAKGRMSKEDAATICVEALDS 275

Query: 274 IPQTGLIFEVC 284
           IPQT LIFEV 
Sbjct: 276 IPQTTLIFEVA 286

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79321173|ref|NP_001031269.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332197231|gb|AEE35352.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  340 bits (873), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 176/287 (61%), Positives = 218/287 (75%), Gaps = 5/287 (1%)

Query: 1   MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
           MAGT+ PS L+ Q   + F+S  +  E AN   +     K+ L RC AKKKISFVDQILD
Sbjct: 1   MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59

Query: 61  YIEGGPKLRKWYGAPDLLPKDGS----NEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVI 116
           YIEGGPKLRKWYGAP+L PKDGS    ++E EE++++  +  +D V VTDGDSD+GQM+I
Sbjct: 60  YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEEEKEDDLDGEKDVVFVTDGDSDLGQMII 119

Query: 117 LSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFIS 176
           L LIVK TR+KALVKDKR A+E+FG+YVE   GDAS+++FLK A +GV ++I P+EGF+S
Sbjct: 120 LQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFLS 179

Query: 177 NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236
              S +GV+H +LLSQLSVY  SGGIQA+M   A+KLAEQDE+  ++S +PYTIIRTG L
Sbjct: 180 IVKSFRGVKHAVLLSQLSVYESSGGIQAMMNSKAKKLAEQDENAAISSNVPYTIIRTGKL 239

Query: 237 QNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEV 283
           +N+PGG QGF F  G AA GS+SKEDAA ICVEAL  IP TGLIFEV
Sbjct: 240 ENSPGGSQGFNFSAGAAAKGSISKEDAARICVEALSVIPPTGLIFEV 286

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	294
TAIR|locus:2030270	312	AT1G72640 [Arabidopsis thalian	0.959	0.903	0.600	6.2e-85
TAIR|locus:2015651	598	HCF173 "high chlorophyll fluor	0.292	0.143	0.367	5.8e-06
TAIR|locus:2185228	253	AT5G02240 [Arabidopsis thalian	0.323	0.375	0.282	0.00031

TAIR|locus:2030270 AT1G72640 [Arabidopsis thaliana (taxid:3702)]

 Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
 Identities = 173/288 (60%), Positives = 209/288 (72%)

Query:     1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
             MAGT+ PS L+ Q   + F+S  +  E AN   +     K+ L RC AKKKISFVDQILD
Sbjct:     1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59

Query:    61 YIEGGPKLRKWYGAPDLLPKDGS-----NXXXXXXXXXXXXXARDAVLVTDGDSDIGQMV 115
             YIEGGPKLRKWYGAP+L PKDGS     +              +D V VTDGDSD+GQM+
Sbjct:    60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEAEEKEDDLDGEKDVVFVTDGDSDLGQMI 119

Query:   116 ILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFI 175
             IL LIVK TR+KALVKDKR A+E+FG+YVE   GDAS+++FLK A +GV ++I P+EGF+
Sbjct:   120 ILQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFL 179

Query:   176 SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGV 235
             S   S +GV+H +LLSQLSVY  SGGIQA+M   A+KLAEQDE+  ++S +PYTIIRTG 
Sbjct:   180 SIVKSFRGVKHAVLLSQLSVYESSGGIQAMMNSKAKKLAEQDENAAISSNVPYTIIRTGK 239

Query:   236 LQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEV 283
             L+N+PGG QGF F  G AA GS+SKEDAA ICVEAL  IP TGLIFEV
Sbjct:   240 LENSPGGSQGFNFSAGAAAKGSISKEDAARICVEALSVIPPTGLIFEV 287

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

TAIR|locus:2015651 HCF173 "high chlorophyll fluorescence phenotype 173" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 5.8e-06, P = 5.8e-06
 Identities = 32/87 (36%), Positives = 45/87 (51%)

Query:   198 GSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGS 257
             GSG ++A  +    K     E  L  SG+ YTIIR G L+  PGG++   F++G   +  
Sbjct:   476 GSG-VEANRREQVLKAKRAGEDSLRRSGLGYTIIRPGPLKEEPGGQRALIFDQGNRISQG 534

Query:   258 LSKEDAAFICVEALESIPQTGLIFEVC 284
             +S  D A ICV+AL         F+VC
Sbjct:   535 ISCADVADICVKALHDSTARNKSFDVC 561

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006413 "translational initiation" evidence=IMP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2185228 AT5G02240 [Arabidopsis thaliana (taxid:3702)]

 Score = 99 (39.9 bits), Expect = 0.00031, Sum P(2) = 0.00031
 Identities = 28/99 (28%), Positives = 46/99 (46%)

Query:   177 NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236
             +A  + GV+H++++  +        +  L  GN      + E  L  SG PYTIIR G L
Sbjct:   118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGL 177

Query:   237 QNTPGGKQ----GFQFEEGCAANGSLSKEDAAFICVEAL 271
              +  GG +    G   E       ++ + D A +C++AL
Sbjct:   178 LDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQAL 216

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.III.2689.1 hypothetical protein (262 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	294
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	1e-15
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	4e-14
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	1e-06
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	2e-06
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	5e-06
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-04
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	0.002

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 73.1 bits (180), Expect = 1e-15
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 18/185 (9%)

Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161
           + V       G+ ++  L+ +  ++ AL ++   A     T V+    D  +   L  AL
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKAPAPGVTPVQ---KDLFDLADLAEAL 57

Query: 162 RGVRSIIC--PSEGF-------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN--- 209
            GV +++    +          + +A +  GV+ ++++S   +YR   G   L       
Sbjct: 58  AGVDAVVDAFGARPDDSDGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTFRLDDAPLFP 117

Query: 210 --ARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFIC 267
             AR  A  +E +L ASG+ +TI+R G L +  G       E   A   S+S+ D A   
Sbjct: 118 PYARAKAAAEE-LLRASGLDWTIVRPGALFDEEGETYEIGTEGDPAGESSISRADVAAAL 176

Query: 268 VEALE 272
           ++ LE
Sbjct: 177 LDELE 181

Length = 182

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 69.2 bits (170), Expect = 4e-14
 Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 24/202 (11%)

Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161
           VLV      +G+ V+  L+ +  +++ALV+D   A +      E + GD ++ + L  AL
Sbjct: 2   VLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLAAAL 61

Query: 162 RGVRSIIC-----PSEG----FISNAGSLK--------GVQHVILLSQLSVYRGSGGIQA 204
            G+ ++I         G     +   G++         GV+  +L+S +   + S  ++A
Sbjct: 62  EGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSIGADKPSHPLEA 121

Query: 205 LMKG-NARKLAEQDESMLMASGIPYTIIR-TGVLQNTPGGKQGFQFEEGCAANGSLSKED 262
           L    +A++ AE     L ASG+ YTI+R  G+  +  G  +     +G   +G +S+ D
Sbjct: 122 LGPYLDAKRKAED---YLRASGLDYTIVRPGGLTDDPAGTGRVVLGGDGTRLDGPISRAD 178

Query: 263 AAFICVEALESIPQT-GLIFEV 283
            A +  EAL   P   G  FE+
Sbjct: 179 VAEVLAEAL-DTPAAIGKTFEL 199

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 51/172 (29%), Positives = 72/172 (41%), Gaps = 23/172 (13%)

Query: 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR 162
           LVT     +G  V+  L+ K   + ALV++   A       VE   GD  + + L+ A  
Sbjct: 2   LVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFAADGVEVRQGDYDDPETLERAFE 61

Query: 163 GVRS--IICPS---------EGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211
           GV    +I PS         + FI +A    GV+H++ LS       SG  +      AR
Sbjct: 62  GVDRLLLISPSDLEDRIQQHKNFI-DAAKQAGVKHIVYLS------ASGADEDSPFLLAR 114

Query: 212 KLAEQDESMLMASGIPYTIIRTGV-LQNTPGGKQGFQFEE---GCAANGSLS 259
                 E  L ASGIPYTI+R G  + N          E    G A +G ++
Sbjct: 115 DHG-ATEKYLEASGIPYTILRPGWFMDNLLEFLPSILEEGTIYGPAGDGKVA 165

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 48.0 bits (114), Expect = 2e-06
 Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 23/147 (15%)

Query: 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 160
            +LVT     +G  V+  L+ +   ++A V++   A    G  VE + GD  + K L   
Sbjct: 2   KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGG-VEVVLGDLRDPKSLVAG 60

Query: 161 LRGV------RSIICPSEGFISNAGSL---------KGVQHVILLSQLSVYRGSGGIQAL 205
            +GV        ++  S+ F +   +           GV+H + LS L     S    A 
Sbjct: 61  AKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAASPSALAR 120

Query: 206 MKGNARKLAEQDESMLMASGIPYTIIR 232
            K          E+ L +SGIPYT +R
Sbjct: 121 AKAAV-------EAALRSSGIPYTTLR 140

Length = 275

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 46.5 bits (111), Expect = 5e-06
 Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 29/187 (15%)

Query: 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN----AMESFGTYVESMAGDASNKKF 156
           +LV       G  V+ +L+     +++AL +D  +    A+ + G  VE + GD  + + 
Sbjct: 1   ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPG--VEVVQGDLDDPES 58

Query: 157 LKTALRGVRSIIC---PSEGFIS----------NAGSLKGVQHVILLSQLSVYRGSGGI- 202
           L+ AL+GV  +       E              +A    GVQH +  S   V + +  + 
Sbjct: 59  LEAALKGVYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAGVQHFVFSSVPDVEKLTLAVP 118

Query: 203 QALMKGNARKLAEQDESMLMASGIPYTIIRTGV-LQNTPGGKQGFQFEEGCAANGSLSKE 261
               K          E  + ASG+P TI+R    ++N        + E+G          
Sbjct: 119 HFDSKAEV-------EEYIRASGLPATILRPAFFMENFLTPPAPQKMEDGTLTLVLPLDP 171

Query: 262 DAAFICV 268
           D     +
Sbjct: 172 DTKLPMI 178

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 17/152 (11%)

Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161
           +L+      IG+ +   L+ +   +  LV++ +   +     V  + GD  +   L  A+
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVAVVEGDLRDLDSLSDAV 60

Query: 162 RGVRSIIC--------------PSEGFISNAGSLK--GVQHVILLSQLSVYRGSGGIQA- 204
           +GV  +I                 EG  +   + K  GV+H I +S L  Y         
Sbjct: 61  QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAYGDLHEETEP 120

Query: 205 LMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236
                   +  + E++L  + +PYTI+R GV+
Sbjct: 121 SPSSPYLAVKAKTEAVLREASLPYTIVRPGVI 152

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 55/218 (25%), Positives = 84/218 (38%), Gaps = 33/218 (15%)

Query: 85  EEDEEKEDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GT 142
           E  E  E++        V V       G+ ++  L+ K   +KA V+D   A  S     
Sbjct: 3   EGAEASEEDAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDP 62

Query: 143 YVESMAGDASN--KKFLKTALRGVRSIICPSEGF-----------ISNAGSLK------- 182
            ++ +  D +    K ++       ++IC + GF           + N G++        
Sbjct: 63  SLQIVRADVTEGSDKLVEAIGDDSDAVICAT-GFRRSFDPFAPWKVDNFGTVNLVEACRK 121

Query: 183 -GVQHVILLSQLSVYRGSGGIQALMKG----NARKLAE----QDESMLMASGIPYTIIRT 233
            GV   IL+S + V  G+   Q L       N   L      Q E  +  SGI YTI+R 
Sbjct: 122 AGVTRFILVSSILV-NGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRP 180

Query: 234 GVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEAL 271
           G L N P         E     GS+S++  A + VEAL
Sbjct: 181 GGLTNDPPTGNIVMEPEDTLYEGSISRDQVAEVAVEAL 218

Length = 251

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	294
CHL00194	317	ycf39 Ycf39; Provisional	99.94
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.93
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.91
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.91
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.9
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.89
PLN02427	386	UDP-apiose/xylose synthase	99.89
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.89
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.89
PLN03209	576	translocon at the inner envelope of chloroplast su	99.89
PLN02214	342	cinnamoyl-CoA reductase	99.89
PLN00016	378	RNA-binding protein; Provisional	99.88
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.88
PLN02572	442	UDP-sulfoquinovose synthase	99.87
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.87
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.87
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.87
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.87
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.86
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.85
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.85
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.85
PLN02650	351	dihydroflavonol-4-reductase	99.85
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.85
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.84
PLN00198	338	anthocyanidin reductase; Provisional	99.84
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.84
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.84
PLN02583	297	cinnamoyl-CoA reductase	99.84
PRK05865	854	hypothetical protein; Provisional	99.83
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.83
PLN02686	367	cinnamoyl-CoA reductase	99.83
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.83
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.82
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.82
PLN02260	668	probable rhamnose biosynthetic enzyme	99.81
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.81
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.81
PLN02206	442	UDP-glucuronate decarboxylase	99.8
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.8
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.8
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.8
PRK07201	657	short chain dehydrogenase; Provisional	99.79
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.79
PLN02653	340	GDP-mannose 4,6-dehydratase	99.79
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.79
PLN02240	352	UDP-glucose 4-epimerase	99.79
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.78
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
COG2910	211	Putative NADH-flavin reductase [General function p	99.78
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.78
PRK12828	239	short chain dehydrogenase; Provisional	99.77
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.77
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.77
PLN02996	491	fatty acyl-CoA reductase	99.76
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.76
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.76
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.76
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.76
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.75
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.75
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.75
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK07825	273	short chain dehydrogenase; Provisional	99.74
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.74
PRK05875	276	short chain dehydrogenase; Provisional	99.74
PRK09186	256	flagellin modification protein A; Provisional	99.74
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.74
PRK06182	273	short chain dehydrogenase; Validated	99.74
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.74
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.73
PRK06138	252	short chain dehydrogenase; Provisional	99.73
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.73
PRK06914	280	short chain dehydrogenase; Provisional	99.72
PRK07775	274	short chain dehydrogenase; Provisional	99.72
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.72
PRK12320	699	hypothetical protein; Provisional	99.72
PRK08263	275	short chain dehydrogenase; Provisional	99.72
PRK06482	276	short chain dehydrogenase; Provisional	99.72
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.72
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
PRK06180	277	short chain dehydrogenase; Provisional	99.72
PRK12829	264	short chain dehydrogenase; Provisional	99.71
PRK07326	237	short chain dehydrogenase; Provisional	99.71
PRK07454	241	short chain dehydrogenase; Provisional	99.71
PRK12939	250	short chain dehydrogenase; Provisional	99.71
PRK07067	257	sorbitol dehydrogenase; Provisional	99.71
PRK07060	245	short chain dehydrogenase; Provisional	99.71
PRK07806	248	short chain dehydrogenase; Provisional	99.71
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.7
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.7
PRK12746	254	short chain dehydrogenase; Provisional	99.7
PRK12827	249	short chain dehydrogenase; Provisional	99.7
PRK09291	257	short chain dehydrogenase; Provisional	99.7
PRK07904	253	short chain dehydrogenase; Provisional	99.7
PRK05993	277	short chain dehydrogenase; Provisional	99.7
PRK08219	227	short chain dehydrogenase; Provisional	99.7
PRK06841	255	short chain dehydrogenase; Provisional	99.69
PRK08339	263	short chain dehydrogenase; Provisional	99.69
PRK06179	270	short chain dehydrogenase; Provisional	99.69
PRK08628	258	short chain dehydrogenase; Provisional	99.69
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.69
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.69
PRK10538	248	malonic semialdehyde reductase; Provisional	99.68
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.68
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.68
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.68
PRK05876	275	short chain dehydrogenase; Provisional	99.68
PRK07063	260	short chain dehydrogenase; Provisional	99.68
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.68
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.68
PRK07577	234	short chain dehydrogenase; Provisional	99.68
PRK07074	257	short chain dehydrogenase; Provisional	99.68
PRK07478	254	short chain dehydrogenase; Provisional	99.68
PRK07890	258	short chain dehydrogenase; Provisional	99.67
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.67
PRK07774	250	short chain dehydrogenase; Provisional	99.67
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.67
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.67
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.67
PRK07024	257	short chain dehydrogenase; Provisional	99.67
PRK06523	260	short chain dehydrogenase; Provisional	99.66
PRK05650	270	short chain dehydrogenase; Provisional	99.66
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.66
PRK08265	261	short chain dehydrogenase; Provisional	99.66
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.66
PRK05866	293	short chain dehydrogenase; Provisional	99.65
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.65
PRK07102	243	short chain dehydrogenase; Provisional	99.65
PRK08017	256	oxidoreductase; Provisional	99.65
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.65
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.65
PRK06398	258	aldose dehydrogenase; Validated	99.65
PRK08264	238	short chain dehydrogenase; Validated	99.65
PRK08324	681	short chain dehydrogenase; Validated	99.65
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.65
PRK09135	249	pteridine reductase; Provisional	99.64
PRK06114	254	short chain dehydrogenase; Provisional	99.64
PRK06128	300	oxidoreductase; Provisional	99.64
PRK07856	252	short chain dehydrogenase; Provisional	99.64
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.64
PRK07109	334	short chain dehydrogenase; Provisional	99.64
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.64
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.64
PRK07035	252	short chain dehydrogenase; Provisional	99.64
PRK05867	253	short chain dehydrogenase; Provisional	99.64
PRK08267	260	short chain dehydrogenase; Provisional	99.64
PRK06172	253	short chain dehydrogenase; Provisional	99.64
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.63
PRK08589	272	short chain dehydrogenase; Validated	99.63
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.63
PRK07062	265	short chain dehydrogenase; Provisional	99.63
PRK08643	256	acetoin reductase; Validated	99.63
PRK12937	245	short chain dehydrogenase; Provisional	99.63
PLN02253	280	xanthoxin dehydrogenase	99.63
PRK06701	290	short chain dehydrogenase; Provisional	99.63
PRK09134	258	short chain dehydrogenase; Provisional	99.63
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.63
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.62
PRK12743	256	oxidoreductase; Provisional	99.62
PRK06181	263	short chain dehydrogenase; Provisional	99.62
PRK09072	263	short chain dehydrogenase; Provisional	99.62
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.62
PRK06139	330	short chain dehydrogenase; Provisional	99.62
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.62
PRK09242	257	tropinone reductase; Provisional	99.62
PRK07814	263	short chain dehydrogenase; Provisional	99.62
PRK07985	294	oxidoreductase; Provisional	99.61
PRK08251	248	short chain dehydrogenase; Provisional	99.61
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.61
PRK06949	258	short chain dehydrogenase; Provisional	99.61
PRK05693	274	short chain dehydrogenase; Provisional	99.61
PRK06196	315	oxidoreductase; Provisional	99.61
PRK05717	255	oxidoreductase; Validated	99.61
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.61
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.61
PRK06483	236	dihydromonapterin reductase; Provisional	99.61
PRK06101	240	short chain dehydrogenase; Provisional	99.6
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.6
PRK07576	264	short chain dehydrogenase; Provisional	99.6
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.6
PRK12742	237	oxidoreductase; Provisional	99.59
PRK06057	255	short chain dehydrogenase; Provisional	99.59
PRK06125	259	short chain dehydrogenase; Provisional	99.59
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.59
PRK06194	287	hypothetical protein; Provisional	99.58
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.58
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.58
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.58
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.58
PLN02503	605	fatty acyl-CoA reductase 2	99.58
PRK07041	230	short chain dehydrogenase; Provisional	99.58
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.58
PRK06500	249	short chain dehydrogenase; Provisional	99.57
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.57
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.57
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.57
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.57
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.57
PRK06123	248	short chain dehydrogenase; Provisional	99.56
PRK07831	262	short chain dehydrogenase; Provisional	99.56
PRK08226	263	short chain dehydrogenase; Provisional	99.56
PRK07677	252	short chain dehydrogenase; Provisional	99.56
PRK06924	251	short chain dehydrogenase; Provisional	99.56
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.56
PRK12747	252	short chain dehydrogenase; Provisional	99.56
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.56
PRK07832	272	short chain dehydrogenase; Provisional	99.56
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.55
PRK07023	243	short chain dehydrogenase; Provisional	99.55
PRK07069	251	short chain dehydrogenase; Validated	99.55
PRK08278	273	short chain dehydrogenase; Provisional	99.55
PRK08703	239	short chain dehydrogenase; Provisional	99.55
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.54
PRK06198	260	short chain dehydrogenase; Provisional	99.54
PRK06484	520	short chain dehydrogenase; Validated	99.54
PRK05872	296	short chain dehydrogenase; Provisional	99.53
PRK07201	657	short chain dehydrogenase; Provisional	99.53
PRK07791	286	short chain dehydrogenase; Provisional	99.53
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.52
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.51
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.51
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.51
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.51
PRK12744	257	short chain dehydrogenase; Provisional	99.51
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.5
PRK05855	582	short chain dehydrogenase; Validated	99.5
PRK05599	246	hypothetical protein; Provisional	99.5
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.5
PRK05884	223	short chain dehydrogenase; Provisional	99.49
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.49
PLN02778	298	3,5-epimerase/4-reductase	99.49
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.49
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.49
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.48
PLN02780	320	ketoreductase/ oxidoreductase	99.48
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.48
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.48
PRK07578	199	short chain dehydrogenase; Provisional	99.48
PRK06197	306	short chain dehydrogenase; Provisional	99.47
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.47
PRK06484	520	short chain dehydrogenase; Validated	99.45
PRK06940	275	short chain dehydrogenase; Provisional	99.44
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.44
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.44
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.43
PRK12367	245	short chain dehydrogenase; Provisional	99.43
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.43
PRK06953	222	short chain dehydrogenase; Provisional	99.42
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.42
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.42
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.41
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.41
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.4
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.39
PRK08862	227	short chain dehydrogenase; Provisional	99.38
PRK05854	313	short chain dehydrogenase; Provisional	99.37
PRK08303	305	short chain dehydrogenase; Provisional	99.37
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.36
PRK08177	225	short chain dehydrogenase; Provisional	99.35
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.3
PLN02260	668	probable rhamnose biosynthetic enzyme	99.28
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.28
KOG0725	270	consensus Reductases with broad range of substrate	99.28
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.28
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.27
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.26
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.26
PLN00015	308	protochlorophyllide reductase	99.26
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.22
KOG1208	314	consensus Dehydrogenases with different specificit	99.2
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.17
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.15
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.14
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.14
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.14
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.11
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.1
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.08
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.05
PRK08309	177	short chain dehydrogenase; Provisional	99.05
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.02
COG1028	251	FabG Dehydrogenases with different specificities (	99.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.87
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.86
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.74
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.68
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.61
PRK06720	169	hypothetical protein; Provisional	98.56
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.42
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.37
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.26
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.22
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.19
PRK09620	229	hypothetical protein; Provisional	98.1
PTZ00325	321	malate dehydrogenase; Provisional	98.07
KOG2774	366	consensus NAD dependent epimerase [General functio	98.05
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	98.01
PRK14982	340	acyl-ACP reductase; Provisional	97.98
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.98
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	97.96
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.95
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.95
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.93
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	97.9
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	97.87
PRK09496	453	trkA potassium transporter peripheral membrane com	97.85
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.78
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.77
PLN00106	323	malate dehydrogenase	97.76
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.74
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	97.74
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.69
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.68
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.68
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.66
PRK05086	312	malate dehydrogenase; Provisional	97.55
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.52
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.46
PRK04148	134	hypothetical protein; Provisional	97.46
PRK09496	453	trkA potassium transporter peripheral membrane com	97.43
COG3268	382	Uncharacterized conserved protein [Function unknow	97.4
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.37
PRK10669	558	putative cation:proton antiport protein; Provision	97.31
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.31
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.28
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.27
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.25
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.25
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.21
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.19
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.17
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.14
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.12
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.08
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.03
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.03
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.02
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.0
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.0
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.99
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.93
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.93
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.89
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.89
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.86
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.82
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.82
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.82
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.81
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	96.81
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.8
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.79
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.78
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.77
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.75
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.68
PRK08328	231	hypothetical protein; Provisional	96.67
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.66
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.66
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.62
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.62
PLN02383	344	aspartate semialdehyde dehydrogenase	96.61
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.6
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.59
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.58
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.55
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.52
PRK08223	287	hypothetical protein; Validated	96.52
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.52
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.51
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.51
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.51
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.5
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.49
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.46
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.42
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.41
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.41
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.4
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.4
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.39
PRK10537	393	voltage-gated potassium channel; Provisional	96.38
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.35
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.35
PLN02494	477	adenosylhomocysteinase	96.34
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.32
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.3
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.3
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.28
PRK07877	722	hypothetical protein; Provisional	96.26
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.25
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.25
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.21
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.2
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.17
PRK08655	437	prephenate dehydrogenase; Provisional	96.15
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.15
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.15
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.15
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.14
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.13
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.13
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.13
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.1
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	96.09
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.09
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.06
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.05
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.04
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.03
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.01
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.01
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.01
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.0
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	95.99
PLN02928	347	oxidoreductase family protein	95.96
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	95.94
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.94
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	95.91
PRK07411	390	hypothetical protein; Validated	95.9
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	95.86
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	95.76
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	95.75
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	95.74
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	95.74
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	95.74
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.74
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.71
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	95.71
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.71
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.71
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	95.71
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.69
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.69
PRK14852	989	hypothetical protein; Provisional	95.67
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	95.64
PLN00203	519	glutamyl-tRNA reductase	95.64
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.62
PRK13403	335	ketol-acid reductoisomerase; Provisional	95.59
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.59
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	95.55
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.54
PRK07574	385	formate dehydrogenase; Provisional	95.54
PLN02948	577	phosphoribosylaminoimidazole carboxylase	95.52
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.51
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.49
PRK06849	389	hypothetical protein; Provisional	95.48
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	95.48
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	95.44
PRK14851	679	hypothetical protein; Provisional	95.42
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	95.42
PRK07417	279	arogenate dehydrogenase; Reviewed	95.41
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.36
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	95.35
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	95.35
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.33
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.33
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.3
PRK12480	330	D-lactate dehydrogenase; Provisional	95.3
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	95.29
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	95.29
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	95.28
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.28
PRK13243	333	glyoxylate reductase; Reviewed	95.28
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	95.27
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	95.27
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.25
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	95.25
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.25
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.24
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	95.22
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.2
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.2
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.19
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	95.16
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.14
PLN03139	386	formate dehydrogenase; Provisional	95.09
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	95.08
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	95.05
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	95.03
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	95.03
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	95.01
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	94.98
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	94.96
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	94.94
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.92
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	94.87
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	94.85
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	94.84
PLN02740	381	Alcohol dehydrogenase-like	94.84
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	94.83
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	94.8
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	94.8
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	94.79
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	94.79

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.94  E-value=3.3e-25  Score=204.34  Aligned_cols=187  Identities=22%  Similarity=0.237  Sum_probs=145.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC-------
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-------  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~-------  172 (294)
                      |+|+||||||+||++++++|+++|++|++++|+.++.......+++++.+|++|++++.++++++|+|||+..       
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~   80 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY   80 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence            5899999999999999999999999999999997665433335799999999999999999999999999721       


Q ss_pred             c----------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecCCC-
Q 022625          173 G----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG-  241 (294)
Q Consensus       173 ~----------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~-  241 (294)
                      .          .+.+++++.|++|||++||.++.....  .+     ....+..+|.++++++++||++||+.++...- 
T Consensus        81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~~--~~-----~~~~K~~~e~~l~~~~l~~tilRp~~~~~~~~~  153 (317)
T CHL00194         81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYPY--IP-----LMKLKSDIEQKLKKSGIPYTIFRLAGFFQGLIS  153 (317)
T ss_pred             chhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccCC--Ch-----HHHHHHHHHHHHHHcCCCeEEEeecHHhhhhhh
Confidence            0          155778889999999999975432111  11     12346678999999999999999997653211 


Q ss_pred             -------CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cccccc
Q 022625          242 -------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       242 -------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                             ......+..+....++|+++|+|++++.++.++...+++|++++++ .+.+|+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el  213 (317)
T CHL00194        154 QYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEI  213 (317)
T ss_pred             hhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHH
Confidence                   1112223345566789999999999999998877789999999875 466654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.93  E-value=4.2e-24  Score=181.03  Aligned_cols=170  Identities=29%  Similarity=0.380  Sum_probs=136.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC---------
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE---------  172 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~---------  172 (294)
                      |+|+||||++|+.++++|+++|++|++++|++++...  ..+++++.+|+.|.+.+.++++++|+||++.+         
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~~   78 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDAA   78 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhhhccccccc
Confidence            7999999999999999999999999999999998776  67899999999999999999999999999932         


Q ss_pred             chHHhhhhhcCCCEEEEecccccccCCCCch-hccc---hhHHHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceee
Q 022625          173 GFISNAGSLKGVQHVILLSQLSVYRGSGGIQ-ALMK---GNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQF  248 (294)
Q Consensus       173 ~~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~-~~~~---~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~  248 (294)
                      ..+.+++++.+++|+|++|+.+++....... ....   ......++.+|+.+++++++|++|||+.+++..........
T Consensus        79 ~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~~~~~~~~~  158 (183)
T PF13460_consen   79 KNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIYGNPSRSYRLIK  158 (183)
T ss_dssp             HHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEEBTTSSSEEEES
T ss_pred             ccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeEeCCCcceeEEe
Confidence            1266678889999999999999887544321 1111   12334556788999999999999999999966644222222


Q ss_pred             ccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          249 EEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       249 ~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                      ..+....++|+++|+|++++++|++
T Consensus       159 ~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  159 EGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             STSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             ccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            2455667899999999999999874

...

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.91  E-value=2.1e-23  Score=189.51  Aligned_cols=193  Identities=16%  Similarity=0.163  Sum_probs=140.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc------hhhhc--CCCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN------AMESF--GTYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~------~~~~~--~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      .+++|+||||+||||++++++|+.+||+|++.+|+++.      +.++.  ++.++.+.+|+.|.+++.++++|||+|||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            57999999999999999999999999999999999986      22222  24689999999999999999999999999


Q ss_pred             cCCc---------------------hHHhhhhhcC-CCEEEEecccccccCCCCc-----------h-----------hc
Q 022625          170 PSEG---------------------FISNAGSLKG-VQHVILLSQLSVYRGSGGI-----------Q-----------AL  205 (294)
Q Consensus       170 ~~~~---------------------~~~~~~~~~g-v~r~V~vSs~~~~~~~~~~-----------~-----------~~  205 (294)
                      ++..                     .+.++|++.. |+|||++||..+......+           |           .|
T Consensus        85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y  164 (327)
T KOG1502|consen   85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY  164 (327)
T ss_pred             eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence            8211                     1455677777 9999999998875432111           0           11


Q ss_pred             cchhHHHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce--------eeccC------CCCCCCcCHHHHHHHHHHHh
Q 022625          206 MKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF--------QFEEG------CAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       206 ~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~--------~~~~g------~~~~~~Is~eDvA~~iv~aL  271 (294)
                      ..++.. ..++|.++..+.+++.+.|.|+.+. ||......        .+-.|      .....++|++|||.+.+.++
T Consensus       165 ~~sK~l-AEkaAw~fa~e~~~~lv~inP~lV~-GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~  242 (327)
T KOG1502|consen  165 ALSKTL-AEKAAWEFAKENGLDLVTINPGLVF-GPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLAL  242 (327)
T ss_pred             HHHHHH-HHHHHHHHHHhCCccEEEecCCceE-CCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHH
Confidence            111111 1235667777789999999999998 66522100        00111      22344799999999999999


Q ss_pred             hCCCCCCcEEEEecCCcccccc
Q 022625          272 ESIPQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       272 ~~~~~~g~~~~v~~g~~~~~ei  293 (294)
                      +++.+.| .|.+.+....++||
T Consensus       243 E~~~a~G-Ryic~~~~~~~~ei  263 (327)
T KOG1502|consen  243 EKPSAKG-RYICVGEVVSIKEI  263 (327)
T ss_pred             cCcccCc-eEEEecCcccHHHH
Confidence            9988875 66666665556654

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.91  E-value=2.3e-22  Score=179.30  Aligned_cols=195  Identities=25%  Similarity=0.312  Sum_probs=143.5

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCC-HHHHHHHh-cCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASN-KKFLKTAL-RGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d-~~~l~~~l-~~~d~Vi~~  170 (294)
                      +...+|+|+||||+|+||+.++++|+++|++|+++.|++++.....+  .+++++.+|++| .+.+.+.+ .++|+||++
T Consensus        13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~   92 (251)
T PLN00141         13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICA   92 (251)
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEEC
Confidence            34557899999999999999999999999999999999877544332  368999999998 46777777 689999988


Q ss_pred             CCc------------------hHHhhhhhcCCCEEEEecccccccCCCC--ch-hccchh----HHHHHHHHHHHHHhCC
Q 022625          171 SEG------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ-ALMKGN----ARKLAEQDESMLMASG  225 (294)
Q Consensus       171 ~~~------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~-~~~~~~----~~~~~~~ae~~l~~~g  225 (294)
                      .+.                  .+.+++.+.+++|||++||..++....+  .. .|...+    ....+..+|.++++++
T Consensus        93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~g  172 (251)
T PLN00141         93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSG  172 (251)
T ss_pred             CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcC
Confidence            210                  1455677788999999999887642211  11 111111    1223557788889999


Q ss_pred             CCEEEEEccceecCCCCCcceeeccC-CCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCccc
Q 022625          226 IPYTIIRTGVLQNTPGGKQGFQFEEG-CAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLC  290 (294)
Q Consensus       226 l~~tivRPg~l~~~~~~~~~~~~~~g-~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~~~  290 (294)
                      ++|++||||++++.+..+. .....+ ....++|+++|+|+++++++..+...+.++.+.+.++.+
T Consensus       173 i~~~iirpg~~~~~~~~~~-~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (251)
T PLN00141        173 INYTIVRPGGLTNDPPTGN-IVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAP  237 (251)
T ss_pred             CcEEEEECCCccCCCCCce-EEECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCC
Confidence            9999999999985543322 222122 123468999999999999999888778999999866654

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.90  E-value=1.4e-22  Score=189.16  Aligned_cols=198  Identities=11%  Similarity=-0.049  Sum_probs=139.9

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh----hc-------CCCcEEeecCCCCHHHHHHHhcC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SF-------GTYVESMAGDASNKKFLKTALRG  163 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~-------~~~v~~v~~D~~d~~~l~~~l~~  163 (294)
                      ....+|+|+||||+||||++|+++|+++|++|++++|.......    ..       ...++++.+|+.|.+.+.+++++
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~   90 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN   90 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhC
Confidence            45567999999999999999999999999999999986432111    10       12578899999999999999999


Q ss_pred             CcEEEEcCCc----------------------hHHhhhhhcCCCEEEEecccccccCCC--Cchh---ccchh-HHHHHH
Q 022625          164 VRSIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSG--GIQA---LMKGN-ARKLAE  215 (294)
Q Consensus       164 ~d~Vi~~~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~--~~~~---~~~~~-~~~~~~  215 (294)
                      +|+|||++..                      .+.+++++.++++|||+||..++....  ....   ..+.. +...|.
T Consensus        91 ~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~  170 (348)
T PRK15181         91 VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKY  170 (348)
T ss_pred             CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHH
Confidence            9999998320                      145677888999999999988775321  1000   00111 111233


Q ss_pred             HHHHHH----HhCCCCEEEEEccceecCCCC--------------------CcceeeccCCCCCCCcCHHHHHHHHHHHh
Q 022625          216 QDESML----MASGIPYTIIRTGVLQNTPGG--------------------KQGFQFEEGCAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       216 ~ae~~l----~~~gl~~tivRPg~l~~~~~~--------------------~~~~~~~~g~~~~~~Is~eDvA~~iv~aL  271 (294)
                      .+|.++    ...+++++++||+.++ ||+.                    .....++.|.+..+++|++|+|++++.++
T Consensus       171 ~~e~~~~~~~~~~~~~~~~lR~~~vy-Gp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~  249 (348)
T PRK15181        171 VNELYADVFARSYEFNAIGLRYFNVF-GRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSA  249 (348)
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeccee-CcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHH
Confidence            444443    3468999999999988 4421                    11122345667789999999999999877


Q ss_pred             hCCC--CCCcEEEEecCC-cccccc
Q 022625          272 ESIP--QTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       272 ~~~~--~~g~~~~v~~g~-~~~~ei  293 (294)
                      ..+.  ..+++||+++++ .+++|+
T Consensus       250 ~~~~~~~~~~~yni~~g~~~s~~e~  274 (348)
T PRK15181        250 TTNDLASKNKVYNVAVGDRTSLNEL  274 (348)
T ss_pred             hcccccCCCCEEEecCCCcEeHHHH
Confidence            6532  357899998874 466654

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.89  E-value=3.4e-22  Score=181.44  Aligned_cols=186  Identities=19%  Similarity=0.254  Sum_probs=135.7

Q ss_pred             EEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccchh--hhcCCCc-EEeecCCCCHHHHHHHhcCCcEEEEcCC-----
Q 022625          103 LVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFGTYV-ESMAGDASNKKFLKTALRGVRSIICPSE-----  172 (294)
Q Consensus       103 lVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~~--~~~~~~v-~~v~~D~~d~~~l~~~l~~~d~Vi~~~~-----  172 (294)
                      |||||+||+|++|+++|+++|  ++|+++++.+....  .....+. +++.+|++|.+++.++++++|+|||++.     
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~   80 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW   80 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence            699999999999999999999  79999988775432  1222233 4899999999999999999999999821     


Q ss_pred             c----------------hHHhhhhhcCCCEEEEecccccccC---CCCc------hhccc---hhHHHHHHHHHHHHHh-
Q 022625          173 G----------------FISNAGSLKGVQHVILLSQLSVYRG---SGGI------QALMK---GNARKLAEQDESMLMA-  223 (294)
Q Consensus       173 ~----------------~~~~~~~~~gv~r~V~vSs~~~~~~---~~~~------~~~~~---~~~~~~~~~ae~~l~~-  223 (294)
                      +                .+.++|++.+++||||+||.++..+   ...+      +++..   ..+...|..+|+++.+ 
T Consensus        81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a  160 (280)
T PF01073_consen   81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEA  160 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhh
Confidence            1                1667889999999999999987543   1111      11111   1122345677877655 


Q ss_pred             C--------CCCEEEEEccceecCCCCC--------------cceeeccCCCCCCCcCHHHHHHHHHHHhh---CC----
Q 022625          224 S--------GIPYTIIRTGVLQNTPGGK--------------QGFQFEEGCAANGSLSKEDAAFICVEALE---SI----  274 (294)
Q Consensus       224 ~--------gl~~tivRPg~l~~~~~~~--------------~~~~~~~g~~~~~~Is~eDvA~~iv~aL~---~~----  274 (294)
                      .        .+..++|||..++ ||++.              ....++.+....++++++|+|++++.+.+   ++    
T Consensus       161 ~~~~~~~g~~l~t~~lRP~~Iy-Gp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~  239 (280)
T PF01073_consen  161 NGSELKNGGRLRTCALRPAGIY-GPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPE  239 (280)
T ss_pred             cccccccccceeEEEEeccEEe-CcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccc
Confidence            2        2889999999998 65521              12334455666889999999999987754   22    


Q ss_pred             CCCCcEEEEecCCcc
Q 022625          275 PQTGLIFEVCEISNL  289 (294)
Q Consensus       275 ~~~g~~~~v~~g~~~  289 (294)
                      ...|+.|++++++..
T Consensus       240 ~~~G~~y~itd~~p~  254 (280)
T PF01073_consen  240 RVAGQAYFITDGEPV  254 (280)
T ss_pred             cCCCcEEEEECCCcc
Confidence            367999999998754

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02427 UDP-apiose/xylose synthase

Probab=99.89  E-value=5.5e-22  Score=187.55  Aligned_cols=195  Identities=15%  Similarity=0.135  Sum_probs=138.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCccchhhhc-------CCCcEEeecCCCCHHHHHHHhcCCcEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-------GTYVESMAGDASNKKFLKTALRGVRSII  168 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~-------~~~v~~v~~D~~d~~~l~~~l~~~d~Vi  168 (294)
                      ...|+||||||+||||++|+++|+++ |++|++++|+.++.....       ..+++++.+|+.|.+.+.++++++|+||
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi   91 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTI   91 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence            34578999999999999999999998 599999998765533221       2368999999999999999999999999


Q ss_pred             EcCC-----ch-----------------HHhhhhhcCCCEEEEecccccccCCCC--------chh--------------
Q 022625          169 CPSE-----GF-----------------ISNAGSLKGVQHVILLSQLSVYRGSGG--------IQA--------------  204 (294)
Q Consensus       169 ~~~~-----~~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~--------~~~--------------  204 (294)
                      |++.     ..                 +.+++++.+ ++||++||..+|.....        ..+              
T Consensus        92 HlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~  170 (386)
T PLN02427         92 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPC  170 (386)
T ss_pred             EcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccccc
Confidence            9832     00                 234556666 89999999887753210        000              


Q ss_pred             -cc-----chhHHHHHHHHHHHHHh----CCCCEEEEEccceecCCCCC--------------------------cc-ee
Q 022625          205 -LM-----KGNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPGGK--------------------------QG-FQ  247 (294)
Q Consensus       205 -~~-----~~~~~~~~~~ae~~l~~----~gl~~tivRPg~l~~~~~~~--------------------------~~-~~  247 (294)
                       +.     ...+...|..+|.++..    .+++++++||+.++ |++..                          .. ..
T Consensus       171 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vy-Gp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  249 (386)
T PLN02427        171 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWI-GPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKL  249 (386)
T ss_pred             ccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEeccccee-CCCCCccccccccccccchHHHHHHHHHhcCCCeEE
Confidence             00     00122235566766653    68999999999988 44310                          01 11


Q ss_pred             eccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcEEEEecC--Ccccccc
Q 022625          248 FEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVCEI--SNLCEQL  293 (294)
Q Consensus       248 ~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~~~v~~g--~~~~~ei  293 (294)
                      ++.|.+..++||++|+|++++.+++++. ..+++||++++  ..+++|+
T Consensus       250 ~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el  298 (386)
T PLN02427        250 VDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQL  298 (386)
T ss_pred             ECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHH
Confidence            2334556789999999999999998764 46789999986  4666664

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.89  E-value=4.1e-22  Score=180.59  Aligned_cols=178  Identities=15%  Similarity=0.146  Sum_probs=138.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHh------cC-CcEEEEcCCc
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL------RG-VRSIICPSEG  173 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l------~~-~d~Vi~~~~~  173 (294)
                      +|+||||||+||+.++++|+++|++|++++|++++..   ..+++.+.+|+.|.+++.+++      ++ +|.||++.+.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~   77 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP   77 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence            5899999999999999999999999999999987643   246778899999999999999      67 9999987321


Q ss_pred             ---------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhC-CCCEEEEEccceecCCC--
Q 022625          174 ---------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMAS-GIPYTIIRTGVLQNTPG--  241 (294)
Q Consensus       174 ---------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~-gl~~tivRPg~l~~~~~--  241 (294)
                               .+.+++++.|++|||++|+..+.....       .     +...+.++++. |++||++||+++++...  
T Consensus        78 ~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~~-------~-----~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~  145 (285)
T TIGR03649        78 IPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKGGP-------A-----MGQVHAHLDSLGGVEYTVLRPTWFMENFSEE  145 (285)
T ss_pred             CCChhHHHHHHHHHHHHcCCCEEEEeeccccCCCCc-------h-----HHHHHHHHHhccCCCEEEEeccHHhhhhccc
Confidence                     256778899999999999876542211       0     22356777775 99999999998764321  


Q ss_pred             -------CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecC-Ccccccc
Q 022625          242 -------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEI-SNLCEQL  293 (294)
Q Consensus       242 -------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g-~~~~~ei  293 (294)
                             ....+..+.++...++|+++|+|++++.+|.++...++.|++.++ ..+.+||
T Consensus       146 ~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~ei  205 (285)
T TIGR03649       146 FHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDV  205 (285)
T ss_pred             ccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHH
Confidence                   111123345677789999999999999999987777889999885 5555554

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.89  E-value=5.7e-22  Score=187.99  Aligned_cols=191  Identities=20%  Similarity=0.238  Sum_probs=142.7

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh------h--cCCCcEEeecCCCCHHHHHHHhc----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------S--FGTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~------~--~~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      ....+++|+||||+|+||++++++|+++|++|++++|+..+...      .  ...+++++.+|++|.+.+.++++    
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~  135 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD  135 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence            34567899999999999999999999999999999998754321      1  12468999999999999999988    


Q ss_pred             CCcEEEEcCC----c-------------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHh--
Q 022625          163 GVRSIICPSE----G-------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA--  223 (294)
Q Consensus       163 ~~d~Vi~~~~----~-------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~--  223 (294)
                      ++|+|||+..    .             .+.+++++.|++|||++||..++.+.   ..|     ...|...|.+++.  
T Consensus       136 ~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p~---~~~-----~~sK~~~E~~l~~~~  207 (390)
T PLN02657        136 PVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKPL---LEF-----QRAKLKFEAELQALD  207 (390)
T ss_pred             CCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCcc---hHH-----HHHHHHHHHHHHhcc
Confidence            5899999721    0             14566788899999999998776432   122     2235567777765  


Q ss_pred             CCCCEEEEEccceecCCC-------CCcc-eeeccCCCC-CCCcCHHHHHHHHHHHhhCCCCCCcEEEEecC--Cccccc
Q 022625          224 SGIPYTIIRTGVLQNTPG-------GKQG-FQFEEGCAA-NGSLSKEDAAFICVEALESIPQTGLIFEVCEI--SNLCEQ  292 (294)
Q Consensus       224 ~gl~~tivRPg~l~~~~~-------~~~~-~~~~~g~~~-~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g--~~~~~e  292 (294)
                      ++++|+||||+.+++...       .+.. ..++.|... ..+|+++|+|++++.++.++...+++|++.++  ..++.|
T Consensus       208 ~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~E  287 (390)
T PLN02657        208 SDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLE  287 (390)
T ss_pred             CCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHH
Confidence            899999999998773221       1111 223444443 35799999999999999887777899999874  456666


Q ss_pred             c
Q 022625          293 L  293 (294)
Q Consensus       293 i  293 (294)
                      +
T Consensus       288 i  288 (390)
T PLN02657        288 Q  288 (390)
T ss_pred             H
Confidence            5

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.89  E-value=2.5e-21  Score=188.40  Aligned_cols=191  Identities=20%  Similarity=0.260  Sum_probs=142.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---------------CCCcEEeecCCCCHHHHHHH
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---------------GTYVESMAGDASNKKFLKTA  160 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------------~~~v~~v~~D~~d~~~l~~~  160 (294)
                      ...+++|+||||+|+||++++++|+++|++|++++|+.+++....               ..+++++.+|++|.+.+.++
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            446789999999999999999999999999999999987654321               12478999999999999999


Q ss_pred             hcCCcEEEEcCCc--------------------hHHhhhhhcCCCEEEEecccccccCCCCchhcc-chhHHHHHHHHHH
Q 022625          161 LRGVRSIICPSEG--------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALM-KGNARKLAEQDES  219 (294)
Q Consensus       161 l~~~d~Vi~~~~~--------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~-~~~~~~~~~~ae~  219 (294)
                      +.++|+|||+.+.                    .+.+++...+++|||++||.++.........+. ......+++.+|.
T Consensus       157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~  236 (576)
T PLN03209        157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEE  236 (576)
T ss_pred             hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHHH
Confidence            9999999998321                    034556778999999999987642111111111 1123446778899


Q ss_pred             HHHhCCCCEEEEEccceecCCCCC----cceeecc-CCCCCCCcCHHHHHHHHHHHhhCCC-CCCcEEEEecCC
Q 022625          220 MLMASGIPYTIIRTGVLQNTPGGK----QGFQFEE-GCAANGSLSKEDAAFICVEALESIP-QTGLIFEVCEIS  287 (294)
Q Consensus       220 ~l~~~gl~~tivRPg~l~~~~~~~----~~~~~~~-g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~~~v~~g~  287 (294)
                      +|..+|++|++||||++.. +...    ....... +......++++|||+++++++.++. ..+++|.+.+++
T Consensus       237 ~L~~sGIrvTIVRPG~L~t-p~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~  309 (576)
T PLN03209        237 ALIASGLPYTIVRPGGMER-PTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAET  309 (576)
T ss_pred             HHHHcCCCEEEEECCeecC-CccccccccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeCC
Confidence            9999999999999999862 2211    1122222 2233456899999999999998765 778999999986

>PLN02214 cinnamoyl-CoA reductase

Probab=99.89  E-value=1.6e-21  Score=181.68  Aligned_cols=196  Identities=16%  Similarity=0.150  Sum_probs=138.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchh-----hhc--CCCcEEeecCCCCHHHHHHHhcCCcEEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESF--GTYVESMAGDASNKKFLKTALRGVRSII  168 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~-----~~~--~~~v~~v~~D~~d~~~l~~~l~~~d~Vi  168 (294)
                      .+++|+|+||||+||||++++++|+++|++|++++|+.++..     ...  ...++++.+|++|.+.+.++++++|+||
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   86 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVF   86 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence            346789999999999999999999999999999999865421     111  1257889999999999999999999999


Q ss_pred             EcCCc-----------------hHHhhhhhcCCCEEEEecccc-cccC-CC----Cchhc---------cchhHH-HHHH
Q 022625          169 CPSEG-----------------FISNAGSLKGVQHVILLSQLS-VYRG-SG----GIQAL---------MKGNAR-KLAE  215 (294)
Q Consensus       169 ~~~~~-----------------~~~~~~~~~gv~r~V~vSs~~-~~~~-~~----~~~~~---------~~~~~~-~~~~  215 (294)
                      |++..                 .+.+++.+.+++|||++||.. +|.. ..    ...+.         .+..++ ..|.
T Consensus        87 h~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~  166 (342)
T PLN02214         87 HTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKM  166 (342)
T ss_pred             EecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHH
Confidence            98321                 145567788999999999964 4431 11    01100         011112 2344


Q ss_pred             HHHHHHH----hCCCCEEEEEccceecCCCCCcc--------------eeeccCCCCCCCcCHHHHHHHHHHHhhCCCCC
Q 022625          216 QDESMLM----ASGIPYTIIRTGVLQNTPGGKQG--------------FQFEEGCAANGSLSKEDAAFICVEALESIPQT  277 (294)
Q Consensus       216 ~ae~~l~----~~gl~~tivRPg~l~~~~~~~~~--------------~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~  277 (294)
                      .+|.++.    +.+++++++||+.++ ||+....              .....+....++||++|+|++++.+++++.. 
T Consensus       167 ~aE~~~~~~~~~~g~~~v~lRp~~vy-Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~~-  244 (342)
T PLN02214        167 VAEQAAWETAKEKGVDLVVLNPVLVL-GPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSA-  244 (342)
T ss_pred             HHHHHHHHHHHHcCCcEEEEeCCceE-CCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCccc-
Confidence            5555543    469999999999998 5542110              0001123446899999999999999987644 


Q ss_pred             CcEEEEecCCcccccc
Q 022625          278 GLIFEVCEISNLCEQL  293 (294)
Q Consensus       278 g~~~~v~~g~~~~~ei  293 (294)
                      +..|+++++..+++|+
T Consensus       245 ~g~yn~~~~~~~~~el  260 (342)
T PLN02214        245 SGRYLLAESARHRGEV  260 (342)
T ss_pred             CCcEEEecCCCCHHHH
Confidence            4589998877777665

>PLN00016 RNA-binding protein; Provisional

Probab=99.88  E-value=6.1e-22  Score=186.91  Aligned_cols=196  Identities=16%  Similarity=0.167  Sum_probs=141.5

Q ss_pred             cCCCCeEEEE----cCCChHHHHHHHHHHHCCCeEEEEEcCccchhh-----------hcCCCcEEeecCCCCHHHHHHH
Q 022625           96 EEARDAVLVT----DGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----------SFGTYVESMAGDASNKKFLKTA  160 (294)
Q Consensus        96 ~~~~~~vlVt----GatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~-----------~~~~~v~~v~~D~~d~~~l~~~  160 (294)
                      ...+++||||    ||||+||++++++|+++||+|++++|+......           ....+++++.+|+.|.+.+. .
T Consensus        49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~  127 (378)
T PLN00016         49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-A  127 (378)
T ss_pred             ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-c
Confidence            3345899999    999999999999999999999999998754221           11235899999998733222 2


Q ss_pred             hcCCcEEEEcCCc------hHHhhhhhcCCCEEEEecccccccCCCC--chhccchhHHHHHHHHHHHHHhCCCCEEEEE
Q 022625          161 LRGVRSIICPSEG------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQALMKGNARKLAEQDESMLMASGIPYTIIR  232 (294)
Q Consensus       161 l~~~d~Vi~~~~~------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~~~~~~~~~~~~~~ae~~l~~~gl~~tivR  232 (294)
                      ..++|+|||+.+.      .+.+++++.|++||||+||.++|.....  ........+...+..+|.++++.+++|+++|
T Consensus       128 ~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~sK~~~E~~l~~~~l~~~ilR  207 (378)
T PLN00016        128 GAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGHLEVEAYLQKLGVNWTSFR  207 (378)
T ss_pred             cCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcchHHHHHHHHHHcCCCeEEEe
Confidence            2578999998431      3677888899999999999988764221  1110001111135678899999999999999


Q ss_pred             ccceecCCCCC--------------ccee-eccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cccccc
Q 022625          233 TGVLQNTPGGK--------------QGFQ-FEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       233 Pg~l~~~~~~~--------------~~~~-~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      |++++ ++...              .... ++.|.+..+++|++|+|++++.++.++...+++|++++++ .++.|+
T Consensus       208 p~~vy-G~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el  283 (378)
T PLN00016        208 PQYIY-GPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGM  283 (378)
T ss_pred             ceeEE-CCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHH
Confidence            99988 43211              1111 2345666789999999999999998877678999999875 566554

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.88  E-value=3.7e-21  Score=177.31  Aligned_cols=194  Identities=16%  Similarity=0.168  Sum_probs=133.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchh---hhc-----CCCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESF-----GTYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~-----~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      .+++|+||||+||||++++++|+++|++|++++|+.++..   ...     ...++++.+|++|.+.+.++++++|+|||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   83 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH   83 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence            4789999999999999999999999999999999876422   111     13688999999999999999999999999


Q ss_pred             cCCc-----------h----------HHhhhhhc-CCCEEEEecccccc--cCCC----C-c----h--hc----cchhH
Q 022625          170 PSEG-----------F----------ISNAGSLK-GVQHVILLSQLSVY--RGSG----G-I----Q--AL----MKGNA  210 (294)
Q Consensus       170 ~~~~-----------~----------~~~~~~~~-gv~r~V~vSs~~~~--~~~~----~-~----~--~~----~~~~~  210 (294)
                      +++.           .          +.+++++. +++|||++||..++  ....    . .    +  +.    ....+
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y  163 (322)
T PLN02986         84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWY  163 (322)
T ss_pred             eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccch
Confidence            8321           0          23445554 78999999998653  1110    0 0    0  00    00111


Q ss_pred             HHHHHHHH----HHHHhCCCCEEEEEccceecCCCCCcc--------eeecc-----CCCCCCCcCHHHHHHHHHHHhhC
Q 022625          211 RKLAEQDE----SMLMASGIPYTIIRTGVLQNTPGGKQG--------FQFEE-----GCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       211 ~~~~~~ae----~~l~~~gl~~tivRPg~l~~~~~~~~~--------~~~~~-----g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                      ...|..+|    .+.++.+++++++||+.++ +|.....        ..+..     +.+...+|+++|+|++++.++++
T Consensus       164 ~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~-Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~  242 (322)
T PLN02986        164 PLSKILAENAAWEFAKDNGIDMVVLNPGFIC-GPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKALET  242 (322)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeEEEEccccee-CCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcC
Confidence            11233344    4445579999999999988 4432110        00111     23345789999999999999988


Q ss_pred             CCCCCcEEEEecCCcccccc
Q 022625          274 IPQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       274 ~~~~g~~~~v~~g~~~~~ei  293 (294)
                      +... ..|++.++..+++|+
T Consensus       243 ~~~~-~~yni~~~~~s~~e~  261 (322)
T PLN02986        243 PSAN-GRYIIDGPIMSVNDI  261 (322)
T ss_pred             cccC-CcEEEecCCCCHHHH
Confidence            6554 489997766677665

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.87  E-value=4.5e-21  Score=184.61  Aligned_cols=200  Identities=19%  Similarity=0.180  Sum_probs=138.1

Q ss_pred             CCCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch-----------------hh------hcCCCcEEeec
Q 022625           93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----------------ME------SFGTYVESMAG  149 (294)
Q Consensus        93 ~~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~-----------------~~------~~~~~v~~v~~  149 (294)
                      .....++|+||||||+||||++|+++|+++|++|++++|.....                 ..      ....+++++.+
T Consensus        41 ~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~  120 (442)
T PLN02572         41 SSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVG  120 (442)
T ss_pred             CCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEEC
Confidence            44566789999999999999999999999999999986422100                 00      01235889999


Q ss_pred             CCCCHHHHHHHhcC--CcEEEEcCC----c----------h-----------HHhhhhhcCCC-EEEEecccccccCCCC
Q 022625          150 DASNKKFLKTALRG--VRSIICPSE----G----------F-----------ISNAGSLKGVQ-HVILLSQLSVYRGSGG  201 (294)
Q Consensus       150 D~~d~~~l~~~l~~--~d~Vi~~~~----~----------~-----------~~~~~~~~gv~-r~V~vSs~~~~~~~~~  201 (294)
                      |++|.+.+.+++++  +|+|||++.    .          .           +.+++++.+++ +||++||..+|.....
T Consensus       121 Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~  200 (442)
T PLN02572        121 DICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNI  200 (442)
T ss_pred             CCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCC
Confidence            99999999999984  799999831    0          0           34457778886 9999999988753210


Q ss_pred             ------c------------hhccchhHHH-HHHHHHHHH----HhCCCCEEEEEccceecCCCC----------------
Q 022625          202 ------I------------QALMKGNARK-LAEQDESML----MASGIPYTIIRTGVLQNTPGG----------------  242 (294)
Q Consensus       202 ------~------------~~~~~~~~~~-~~~~ae~~l----~~~gl~~tivRPg~l~~~~~~----------------  242 (294)
                            .            .+..+...+. .|..+|.++    ...|++++++||+.++ ||+.                
T Consensus       201 ~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vy-Gp~~~~~~~~~~li~~~~~~  279 (442)
T PLN02572        201 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVY-GVRTDETMMDEELINRLDYD  279 (442)
T ss_pred             CCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEeccccc-CCCCcccccccccccccCcc
Confidence                  0            0111111122 233344444    3469999999999988 4431                


Q ss_pred             ----------------Ccc-eeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCC--cEEEEecCCcccccc
Q 022625          243 ----------------KQG-FQFEEGCAANGSLSKEDAAFICVEALESIPQTG--LIFEVCEISNLCEQL  293 (294)
Q Consensus       243 ----------------~~~-~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g--~~~~v~~g~~~~~ei  293 (294)
                                      +.. ..++.|.+..++++++|+|++++.+++++...+  .+||++++..+++|+
T Consensus       280 ~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~~si~el  349 (442)
T PLN02572        280 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQFSVNEL  349 (442)
T ss_pred             cchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCceeHHHH
Confidence                            111 123456677899999999999999998654334  589998777777665

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.87  E-value=1e-21  Score=187.75  Aligned_cols=247  Identities=17%  Similarity=0.202  Sum_probs=184.0

Q ss_pred             eeecceeeeecCCcccccCCCcceeeeeCCeeEEEecCCcccchHHHHHHHHhcCccccccccCCCCCCCCCCCCccccc
Q 022625           11 VIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEK   90 (294)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~l~~~~~~~~~~~~   90 (294)
                      ..--||++.+..+.+...|++-.+.++.+|+.             +++.+   ....+|+ ..-.|+|.|++...+.   
T Consensus       182 iiAips~~~~~~~~i~~~l~~~~~~v~~lP~~-------------~~l~~---~~~~lre-I~ieDLLgR~pV~~d~---  241 (588)
T COG1086         182 LIAIPSASQEERRRILLRLARTGIAVRILPQL-------------TDLKD---LNGQLRE-IEIEDLLGRPPVALDT---  241 (588)
T ss_pred             EEecCCCCHHHHHHHHHHHHhcCCcEEecCcH-------------HHHHH---hcccccc-CCHHHHhCCCCCCCCH---
Confidence            34457888888888888899999999998775             33333   2233554 2234999999888776   


Q ss_pred             CCCCCcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhh-------hcC-CCcEEeecCCCCHHHHHHHh
Q 022625           91 EDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME-------SFG-TYVESMAGDASNKKFLKTAL  161 (294)
Q Consensus        91 ~~~~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~-------~~~-~~v~~v~~D~~d~~~l~~~l  161 (294)
                      ........+|+||||||+|.||+++|+|+++.+. +++++.|++-+...       .++ ..+.++.+|+.|.+.+.+++
T Consensus       242 ~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~  321 (588)
T COG1086         242 ELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAM  321 (588)
T ss_pred             HHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHH
Confidence            5566788999999999999999999999999986 77778888865322       233 47889999999999999999


Q ss_pred             cC--CcEEEEcCC-------------c---------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHH
Q 022625          162 RG--VRSIICPSE-------------G---------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQD  217 (294)
Q Consensus       162 ~~--~d~Vi~~~~-------------~---------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~a  217 (294)
                      ++  +|+|||++.             +         .++++|.+.|+++||++||+++.+|.+.++..        |+.+
T Consensus       322 ~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvmGaT--------Kr~a  393 (588)
T COG1086         322 EGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVMGAT--------KRLA  393 (588)
T ss_pred             hcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchHhhHH--------HHHH
Confidence            99  899999821             1         26788999999999999999999999888765        7788


Q ss_pred             HHHHHh-----C--CCCEEEEEccceecCCC-----------CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCc
Q 022625          218 ESMLMA-----S--GIPYTIIRTGVLQNTPG-----------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGL  279 (294)
Q Consensus       218 e~~l~~-----~--gl~~tivRPg~l~~~~~-----------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~  279 (294)
                      |.++++     +  +..++++|.|.+.+..+           .+....+...+-..-+.+.+|.++.++++... ...|.
T Consensus       394 E~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~-~~gGe  472 (588)
T COG1086         394 EKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAI-AKGGE  472 (588)
T ss_pred             HHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhh-cCCCc
Confidence            887765     2  48899999999885443           12222222233334456667777777776654 45566


Q ss_pred             EEEEecC
Q 022625          280 IFEVCEI  286 (294)
Q Consensus       280 ~~~v~~g  286 (294)
                      +|-+--|
T Consensus       473 ifvldMG  479 (588)
T COG1086         473 IFVLDMG  479 (588)
T ss_pred             EEEEcCC
Confidence            7766664

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.87  E-value=6e-21  Score=177.82  Aligned_cols=193  Identities=13%  Similarity=0.172  Sum_probs=136.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCccchhhhcC-CCcEEeecCCC-CHHHHHHHhcCCcEEEEcCC---
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDAS-NKKFLKTALRGVRSIICPSE---  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~-d~~~l~~~l~~~d~Vi~~~~---  172 (294)
                      +|+|+||||+||||++|+++|+++ |++|++++|+..+.....+ ..++++.+|+. +.+.+.++++++|+|||++.   
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~   80 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIAT   80 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCC
Confidence            478999999999999999999986 6999999997665443333 46899999997 77788888999999999721   


Q ss_pred             -c------------------hHHhhhhhcCCCEEEEecccccccCCCC--chh---------c-cch-hHHHHHHHHHHH
Q 022625          173 -G------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQA---------L-MKG-NARKLAEQDESM  220 (294)
Q Consensus       173 -~------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~~---------~-~~~-~~~~~~~~ae~~  220 (294)
                       .                  .+.+++++.+ ++||++||..++.....  ..+         . .+. .+...|..+|.+
T Consensus        81 ~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~  159 (347)
T PRK11908         81 PATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRV  159 (347)
T ss_pred             hHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHH
Confidence             0                  1355667777 79999999887753211  100         0 000 111234455555


Q ss_pred             HH----hCCCCEEEEEccceecCCCC-----------------------Ccc-eeeccCCCCCCCcCHHHHHHHHHHHhh
Q 022625          221 LM----ASGIPYTIIRTGVLQNTPGG-----------------------KQG-FQFEEGCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       221 l~----~~gl~~tivRPg~l~~~~~~-----------------------~~~-~~~~~g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                      ++    ..+++++++||+.++ +++.                       +.. ..+..|.+...+||++|++++++.++.
T Consensus       160 ~~~~~~~~~~~~~ilR~~~v~-Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~  238 (347)
T PRK11908        160 IWAYGMEEGLNFTLFRPFNWI-GPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIE  238 (347)
T ss_pred             HHHHHHHcCCCeEEEeeeeee-CCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHh
Confidence            43    479999999999887 3321                       011 122345667789999999999999998


Q ss_pred             CCC--CCCcEEEEecCC--cccccc
Q 022625          273 SIP--QTGLIFEVCEIS--NLCEQL  293 (294)
Q Consensus       273 ~~~--~~g~~~~v~~g~--~~~~ei  293 (294)
                      ++.  ..+++||++++.  .+++|+
T Consensus       239 ~~~~~~~g~~yni~~~~~~~s~~e~  263 (347)
T PRK11908        239 NKDGVASGKIYNIGNPKNNHSVREL  263 (347)
T ss_pred             CccccCCCCeEEeCCCCCCcCHHHH
Confidence            763  457899999863  566665

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.87  E-value=5.1e-21  Score=175.90  Aligned_cols=194  Identities=13%  Similarity=0.138  Sum_probs=133.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchh---hh--c---CCCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES--F---GTYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~---~~--~---~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      .+|+||||||+||||++++++|+++|++|++++|+.+...   ..  .   ...++++.+|+.|.+.+.++++++|+|||
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   82 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH   82 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence            4689999999999999999999999999999999865421   11  1   23688999999999999999999999999


Q ss_pred             cCCc-----------h----------HHhhhhhc-CCCEEEEeccccc--ccCCC-----Cch------hcc---chhHH
Q 022625          170 PSEG-----------F----------ISNAGSLK-GVQHVILLSQLSV--YRGSG-----GIQ------ALM---KGNAR  211 (294)
Q Consensus       170 ~~~~-----------~----------~~~~~~~~-gv~r~V~vSs~~~--~~~~~-----~~~------~~~---~~~~~  211 (294)
                      +++.           .          +.+++.+. +++|||++||.++  +....     ...      +..   ....+
T Consensus        83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y  162 (322)
T PLN02662         83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWY  162 (322)
T ss_pred             eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchH
Confidence            8320           0          33445555 8999999999763  32110     000      000   00011


Q ss_pred             -HHHHHHHHHH----HhCCCCEEEEEccceecCCCCCcc--e------ee-----ccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          212 -KLAEQDESML----MASGIPYTIIRTGVLQNTPGGKQG--F------QF-----EEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       212 -~~~~~ae~~l----~~~gl~~tivRPg~l~~~~~~~~~--~------~~-----~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                       ..|..+|.++    ++.+++++++||+.++ +|.....  .      .+     ..+....++||++|+|++++.++..
T Consensus       163 ~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~-Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  241 (322)
T PLN02662        163 VLSKTLAEEAAWKFAKENGIDMVTINPAMVI-GPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQAFEI  241 (322)
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCccc-CCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcC
Confidence             1233444443    4579999999999988 5432110  0      00     1123456789999999999999987


Q ss_pred             CCCCCcEEEEecCCcccccc
Q 022625          274 IPQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       274 ~~~~g~~~~v~~g~~~~~ei  293 (294)
                      +... ..|++.+...+++|+
T Consensus       242 ~~~~-~~~~~~g~~~s~~e~  260 (322)
T PLN02662        242 PSAS-GRYCLVERVVHYSEV  260 (322)
T ss_pred             cCcC-CcEEEeCCCCCHHHH
Confidence            6544 478888777777765

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.87  E-value=6.5e-21  Score=179.57  Aligned_cols=194  Identities=13%  Similarity=0.031  Sum_probs=137.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC----
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE----  172 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~----  172 (294)
                      ..+|+|+||||+||||++++++|+++|++|++++|............++++.+|++|.+.+.++++++|+|||+..    
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~   98 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGG   98 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEcccccCC
Confidence            3568999999999999999999999999999999865422111112367888999999999999999999999831    


Q ss_pred             -c------------------hHHhhhhhcCCCEEEEecccccccCCCC------ch-----hccch-hHHHHHHHHHHHH
Q 022625          173 -G------------------FISNAGSLKGVQHVILLSQLSVYRGSGG------IQ-----ALMKG-NARKLAEQDESML  221 (294)
Q Consensus       173 -~------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~------~~-----~~~~~-~~~~~~~~ae~~l  221 (294)
                       +                  .+.+++++.++++|||+||..+|.....      ..     +..+. .+...|..+|..+
T Consensus        99 ~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~  178 (370)
T PLN02695         99 MGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELC  178 (370)
T ss_pred             ccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHH
Confidence             0                  1445677889999999999877653211      00     11111 1222344555544


Q ss_pred             ----HhCCCCEEEEEccceecCCCCC--------------------cc-eeeccCCCCCCCcCHHHHHHHHHHHhhCCCC
Q 022625          222 ----MASGIPYTIIRTGVLQNTPGGK--------------------QG-FQFEEGCAANGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       222 ----~~~gl~~tivRPg~l~~~~~~~--------------------~~-~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                          ...+++++++||+.++ +|+..                    .. ..++.|.+..+++|++|++++++.++..+  
T Consensus       179 ~~~~~~~g~~~~ilR~~~vy-Gp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~--  255 (370)
T PLN02695        179 KHYTKDFGIECRIGRFHNIY-GPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD--  255 (370)
T ss_pred             HHHHHHhCCCEEEEEECCcc-CCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc--
Confidence                3479999999999988 44310                    11 12345667788999999999999987664  


Q ss_pred             CCcEEEEecCCc-ccccc
Q 022625          277 TGLIFEVCEISN-LCEQL  293 (294)
Q Consensus       277 ~g~~~~v~~g~~-~~~ei  293 (294)
                      .+++||+++++. +++|+
T Consensus       256 ~~~~~nv~~~~~~s~~el  273 (370)
T PLN02695        256 FREPVNIGSDEMVSMNEM  273 (370)
T ss_pred             CCCceEecCCCceeHHHH
Confidence            357999988744 55543

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.86  E-value=4.1e-21  Score=169.22  Aligned_cols=190  Identities=22%  Similarity=0.239  Sum_probs=137.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc--hhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC----c--
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE----G--  173 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~----~--  173 (294)
                      |+|+||||.+|+.+++.|++.+++|++++|++.+  .......+++++.+|+.|.+++.++|+++|+||++.+    .  
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~   80 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSEL   80 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCHH
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhhh
Confidence            7999999999999999999999999999999854  3333335789999999999999999999999999833    1  


Q ss_pred             ----hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecCC---------
Q 022625          174 ----FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTP---------  240 (294)
Q Consensus       174 ----~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~---------  240 (294)
                          .+.+++++.|++|||+.|....+.......+.  ......+...|+++++.+++||+||||++++..         
T Consensus        81 ~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p~--~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~~~~~~~  158 (233)
T PF05368_consen   81 EQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEPE--IPHFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPPFAPVVD  158 (233)
T ss_dssp             HHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTTH--HHHHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTTTHHTTC
T ss_pred             hhhhhHHHhhhccccceEEEEEeccccccccccccc--chhhhhhhhhhhhhhhccccceeccccchhhhhhhhhccccc
Confidence                27788999999999976554444322221111  112234567899999999999999999866421         


Q ss_pred             -CCC--cceeeccCCCCCCC-cCHHHHHHHHHHHhhCCCC--CCcEEEEecCCcccccc
Q 022625          241 -GGK--QGFQFEEGCAANGS-LSKEDAAFICVEALESIPQ--TGLIFEVCEISNLCEQL  293 (294)
Q Consensus       241 -~~~--~~~~~~~g~~~~~~-Is~eDvA~~iv~aL~~~~~--~g~~~~v~~g~~~~~ei  293 (294)
                       ...  .......++....+ ++.+|+|++++.+|.+|..  .++.+.+.++..+.+||
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~~~~t~~ei  217 (233)
T PF05368_consen  159 IKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAGETLTYNEI  217 (233)
T ss_dssp             SCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGGGEEEHHHH
T ss_pred             ccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCCCCCCHHHH
Confidence             011  11233344544555 4999999999999999875  47888888777777765

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.85  E-value=5e-20  Score=171.85  Aligned_cols=192  Identities=13%  Similarity=0.075  Sum_probs=129.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc---hhhh----cCCCcEEeecCCCCHHHHHHHhcC--CcEEEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---AMES----FGTYVESMAGDASNKKFLKTALRG--VRSIIC  169 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~---~~~~----~~~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~  169 (294)
                      +++||||||+||||++++++|+++|++++++.+...+   ....    ....++++.+|++|.+.+.+++++  +|+|||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            4789999999999999999999999986655443221   1111    112577889999999999999985  899999


Q ss_pred             cCCc---------h-------------HHhhhhh---------cCCCEEEEecccccccCCCC----ch---hccch-hH
Q 022625          170 PSEG---------F-------------ISNAGSL---------KGVQHVILLSQLSVYRGSGG----IQ---ALMKG-NA  210 (294)
Q Consensus       170 ~~~~---------~-------------~~~~~~~---------~gv~r~V~vSs~~~~~~~~~----~~---~~~~~-~~  210 (294)
                      +++.         .             +.+++.+         .++++||++||..+|.....    ..   +..+. .+
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y  160 (355)
T PRK10217         81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY  160 (355)
T ss_pred             CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChh
Confidence            8321         0             3344443         35789999999877652110    00   00011 11


Q ss_pred             HHHHHHHHHHH----HhCCCCEEEEEccceecCCCC---------------Cc-ceeeccCCCCCCCcCHHHHHHHHHHH
Q 022625          211 RKLAEQDESML----MASGIPYTIIRTGVLQNTPGG---------------KQ-GFQFEEGCAANGSLSKEDAAFICVEA  270 (294)
Q Consensus       211 ~~~~~~ae~~l----~~~gl~~tivRPg~l~~~~~~---------------~~-~~~~~~g~~~~~~Is~eDvA~~iv~a  270 (294)
                      ...|..+|.++    ++.+++++++||+.++ ||+.               +. ...++.|++..+++|++|++++++.+
T Consensus       161 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~-Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~  239 (355)
T PRK10217        161 SASKASSDHLVRAWLRTYGLPTLITNCSNNY-GPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCV  239 (355)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEeeeeee-CCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHH
Confidence            11233444433    4579999999999988 4442               11 12345667788999999999999999


Q ss_pred             hhCCCCCCcEEEEecCCc-cccc
Q 022625          271 LESIPQTGLIFEVCEISN-LCEQ  292 (294)
Q Consensus       271 L~~~~~~g~~~~v~~g~~-~~~e  292 (294)
                      +... ..+++||+++++. ++.|
T Consensus       240 ~~~~-~~~~~yni~~~~~~s~~~  261 (355)
T PRK10217        240 ATTG-KVGETYNIGGHNERKNLD  261 (355)
T ss_pred             HhcC-CCCCeEEeCCCCcccHHH
Confidence            8764 4578999999864 4444

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.85  E-value=1.2e-20  Score=165.14  Aligned_cols=183  Identities=22%  Similarity=0.227  Sum_probs=136.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-CCCcEEeecCCCCHHHHHHHhcCC--cEEEEcCCc-----
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGV--RSIICPSEG-----  173 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~l~~~l~~~--d~Vi~~~~~-----  173 (294)
                      ||||||+|+||++++++|+++|+.|+.+.|...+..... ...++++.+|+.|.+.+.++++..  |+|||+++.     
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE   80 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence            799999999999999999999999999999876543221 127899999999999999999877  999998221     


Q ss_pred             -----------------hHHhhhhhcCCCEEEEecccccccCCCCc--h---hccch-hHHHHHHHHHHHHH----hCCC
Q 022625          174 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--Q---ALMKG-NARKLAEQDESMLM----ASGI  226 (294)
Q Consensus       174 -----------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~--~---~~~~~-~~~~~~~~ae~~l~----~~gl  226 (294)
                                       .+.+++.+.++++||++||..++......  .   +..+. .....|...|++++    ..++
T Consensus        81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~  160 (236)
T PF01370_consen   81 SFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKYGL  160 (236)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                             04456788899999999998887644211  0   11111 11223444555544    3699


Q ss_pred             CEEEEEccceecCC----C-------------CCc-ceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 022625          227 PYTIIRTGVLQNTP----G-------------GKQ-GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVC  284 (294)
Q Consensus       227 ~~tivRPg~l~~~~----~-------------~~~-~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~  284 (294)
                      +++++||+.+++..    .             .+. ...++.+....++++++|+|++++.+++++...+++|||+
T Consensus       161 ~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yNig  236 (236)
T PF01370_consen  161 RVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIYNIG  236 (236)
T ss_dssp             EEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred             ccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999999988433    1             111 2344567788999999999999999999988789999984

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.85  E-value=5.8e-20  Score=169.43  Aligned_cols=194  Identities=15%  Similarity=0.170  Sum_probs=133.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh---hc-----CCCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF-----GTYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~-----~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      .+|+|+||||+||||++++++|+++|++|++++|+..+...   ..     ...++++.+|++|.+.+.++++++|+|||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            47899999999999999999999999999999988764321   11     13588899999999999999999999999


Q ss_pred             cCCc---------h-------------HHhhhhhc-CCCEEEEecccccccCCC-------Cchh---ccc-------hh
Q 022625          170 PSEG---------F-------------ISNAGSLK-GVQHVILLSQLSVYRGSG-------GIQA---LMK-------GN  209 (294)
Q Consensus       170 ~~~~---------~-------------~~~~~~~~-gv~r~V~vSs~~~~~~~~-------~~~~---~~~-------~~  209 (294)
                      +++.         .             +.+++.+. ++++||++||..++....       ...+   ..+       ..
T Consensus        84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~  163 (325)
T PLN02989         84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW  163 (325)
T ss_pred             eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence            8321         0             23344443 578999999986642210       0000   000       01


Q ss_pred             HHHHHHHHHHHHH----hCCCCEEEEEccceecCCCCCcc--e------eeccC-----CCCCCCcCHHHHHHHHHHHhh
Q 022625          210 ARKLAEQDESMLM----ASGIPYTIIRTGVLQNTPGGKQG--F------QFEEG-----CAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       210 ~~~~~~~ae~~l~----~~gl~~tivRPg~l~~~~~~~~~--~------~~~~g-----~~~~~~Is~eDvA~~iv~aL~  272 (294)
                      +...|..+|.++.    ..+++++++||+.++ +|+....  .      ....+     .....++|++|+|++++.+++
T Consensus       164 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vy-Gp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l~  242 (325)
T PLN02989        164 YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVT-GPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKALE  242 (325)
T ss_pred             hHHHHHHHHHHHHHHHHHcCCeEEEEcCCcee-CCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHhc
Confidence            1123445555543    469999999999988 5542110  0      00012     223578999999999999998


Q ss_pred             CCCCCCcEEEEecCCcccccc
Q 022625          273 SIPQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       273 ~~~~~g~~~~v~~g~~~~~ei  293 (294)
                      .+.. +.+||+.++..+++||
T Consensus       243 ~~~~-~~~~ni~~~~~s~~ei  262 (325)
T PLN02989        243 TPSA-NGRYIIDGPVVTIKDI  262 (325)
T ss_pred             Cccc-CceEEEecCCCCHHHH
Confidence            7654 4589997777777765

>PLN02650 dihydroflavonol-4-reductase

Probab=99.85  E-value=5e-20  Score=171.91  Aligned_cols=194  Identities=14%  Similarity=0.131  Sum_probs=131.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh---hc--C---CCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF--G---TYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~--~---~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      ..|+||||||+||||++++++|+++|++|++++|+.+....   ..  +   ..++++.+|++|.+.+.++++++|+|||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH   83 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH   83 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence            35799999999999999999999999999999998755322   11  1   2478899999999999999999999999


Q ss_pred             cCCc-----------h----------HHhhhhhcC-CCEEEEecccccccCCC---C-chhc------------cchhHH
Q 022625          170 PSEG-----------F----------ISNAGSLKG-VQHVILLSQLSVYRGSG---G-IQAL------------MKGNAR  211 (294)
Q Consensus       170 ~~~~-----------~----------~~~~~~~~g-v~r~V~vSs~~~~~~~~---~-~~~~------------~~~~~~  211 (294)
                      ++..           .          +.+++.+.+ ++|||++||..++....   + ..+.            .+..++
T Consensus        84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  163 (351)
T PLN02650         84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMY  163 (351)
T ss_pred             eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchH
Confidence            8210           0          344566666 78999999986543210   0 0000            000111


Q ss_pred             -HHHHHHHHHH----HhCCCCEEEEEccceecCCCCCccee---------------eccCCCCCCCcCHHHHHHHHHHHh
Q 022625          212 -KLAEQDESML----MASGIPYTIIRTGVLQNTPGGKQGFQ---------------FEEGCAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       212 -~~~~~ae~~l----~~~gl~~tivRPg~l~~~~~~~~~~~---------------~~~g~~~~~~Is~eDvA~~iv~aL  271 (294)
                       ..|..+|.++    ++.+++++++||+.++ +|+......               ........+++|++|+|++++.++
T Consensus       164 ~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~-Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l  242 (351)
T PLN02650        164 FVSKTLAEKAAWKYAAENGLDFISIIPTLVV-GPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLF  242 (351)
T ss_pred             HHHHHHHHHHHHHHHHHcCCeEEEECCCceE-CCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHHh
Confidence             1234455443    4479999999999988 554211000               000112358899999999999999


Q ss_pred             hCCCCCCcEEEEecCCcccccc
Q 022625          272 ESIPQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       272 ~~~~~~g~~~~v~~g~~~~~ei  293 (294)
                      +++... ..|++++.+.+++||
T Consensus       243 ~~~~~~-~~~i~~~~~~s~~el  263 (351)
T PLN02650        243 EHPAAE-GRYICSSHDATIHDL  263 (351)
T ss_pred             cCcCcC-ceEEecCCCcCHHHH
Confidence            875443 478655556677665

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.85  E-value=8.5e-20  Score=167.61  Aligned_cols=192  Identities=19%  Similarity=0.196  Sum_probs=135.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc------
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~------  173 (294)
                      |+|+||||+|+||+++++.|+++|++|+++.|++++.......+++++.+|++|.+++.++++++|+|||+...      
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~   80 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAP   80 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCCC
Confidence            57999999999999999999999999999999877654333346889999999999999999999999998311      


Q ss_pred             --------------hHHhhhhhcCCCEEEEecccccccCC-CC--chh---ccc----hhHHHHHHHHHHHHH----hCC
Q 022625          174 --------------FISNAGSLKGVQHVILLSQLSVYRGS-GG--IQA---LMK----GNARKLAEQDESMLM----ASG  225 (294)
Q Consensus       174 --------------~~~~~~~~~gv~r~V~vSs~~~~~~~-~~--~~~---~~~----~~~~~~~~~ae~~l~----~~g  225 (294)
                                    .+.+++.+.++++||++||..++... .+  ...   ..+    ..+...|..+|.+++    ..+
T Consensus        81 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~  160 (328)
T TIGR03466        81 DPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKG  160 (328)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhcC
Confidence                          03456677889999999998776531 10  000   000    011122334455444    368


Q ss_pred             CCEEEEEccceecCCCCCcc-----e--------eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCccccc
Q 022625          226 IPYTIIRTGVLQNTPGGKQG-----F--------QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLCEQ  292 (294)
Q Consensus       226 l~~tivRPg~l~~~~~~~~~-----~--------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~~~~e  292 (294)
                      ++++++||+.++ +++....     .        .....+...++++++|+|++++.+++++ ..+..|++.+...+++|
T Consensus       161 ~~~~ilR~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~-~~~~~~~~~~~~~s~~e  238 (328)
T TIGR03466       161 LPVVIVNPSTPI-GPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERG-RIGERYILGGENLTLKQ  238 (328)
T ss_pred             CCEEEEeCCccC-CCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCC-CCCceEEecCCCcCHHH
Confidence            999999999988 4432110     0        0011123457899999999999999874 45788998766666665


Q ss_pred             c
Q 022625          293 L  293 (294)
Q Consensus       293 i  293 (294)
                      +
T Consensus       239 ~  239 (328)
T TIGR03466       239 I  239 (328)
T ss_pred             H
Confidence            4

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.84  E-value=7.7e-20  Score=170.59  Aligned_cols=189  Identities=15%  Similarity=0.100  Sum_probs=133.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---c--CCCcEEeecCCCCHHHHHHHhcC--CcEEEEc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRG--VRSIICP  170 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~--~~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~~  170 (294)
                      ++|+|+||||+||||+++++.|+++|++|++++|+.......   .  ...++++.+|++|.+.+.+++++  +|+|||+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            478999999999999999999999999999999987643221   1  23577899999999999999886  5999998


Q ss_pred             CCc----------------------hHHhhhhhcC-CCEEEEecccccccCCC------------CchhccchhHHHHHH
Q 022625          171 SEG----------------------FISNAGSLKG-VQHVILLSQLSVYRGSG------------GIQALMKGNARKLAE  215 (294)
Q Consensus       171 ~~~----------------------~~~~~~~~~g-v~r~V~vSs~~~~~~~~------------~~~~~~~~~~~~~~~  215 (294)
                      +..                      .+.+++...+ +++||++||..+|....            +..+|..     .|.
T Consensus        83 A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~-----sK~  157 (349)
T TIGR02622        83 AAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSS-----SKA  157 (349)
T ss_pred             CcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchh-----HHH
Confidence            321                      0344555555 78999999987764211            1122222     233


Q ss_pred             HHHHHHHh-----------CCCCEEEEEccceecCCC----------------CCcceeeccCCCCCCCcCHHHHHHHHH
Q 022625          216 QDESMLMA-----------SGIPYTIIRTGVLQNTPG----------------GKQGFQFEEGCAANGSLSKEDAAFICV  268 (294)
Q Consensus       216 ~ae~~l~~-----------~gl~~tivRPg~l~~~~~----------------~~~~~~~~~g~~~~~~Is~eDvA~~iv  268 (294)
                      .+|.+++.           .+++++++||+.++ ||+                .+....++.|.+...++|++|++++++
T Consensus       158 ~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vy-Gp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~  236 (349)
T TIGR02622       158 CAELVIASYRSSFFGVANFHGIKIASARAGNVI-GGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYL  236 (349)
T ss_pred             HHHHHHHHHHHHhhcccccCCCcEEEEccCccc-CCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHH
Confidence            34444332           28999999999988 442                122234456677889999999999999


Q ss_pred             HHhhCC----CCCCcEEEEecC---Cccccc
Q 022625          269 EALESI----PQTGLIFEVCEI---SNLCEQ  292 (294)
Q Consensus       269 ~aL~~~----~~~g~~~~v~~g---~~~~~e  292 (294)
                      .++...    ...+++|||+++   ..++.|
T Consensus       237 ~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~  267 (349)
T TIGR02622       237 LLAEKLFTGQAEFAGAWNFGPRASDNARVVE  267 (349)
T ss_pred             HHHHHHhhcCccccceeeeCCCcccCcCHHH
Confidence            887642    233679999975   455544

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.84  E-value=1.1e-19  Score=168.57  Aligned_cols=194  Identities=13%  Similarity=0.144  Sum_probs=130.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh-----hcC--CCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----SFG--TYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~-----~~~--~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      .+++|+||||+||||++++++|+++|++|++++|+.+....     ...  ..++++.+|++|.+.+.++++++|+|||+
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   87 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHV   87 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEe
Confidence            36899999999999999999999999999999998654221     111  25889999999999999999999999998


Q ss_pred             CCc-----------h----------HHhhhhhc-CCCEEEEecccccccCCC------Cc----h--------hccchhH
Q 022625          171 SEG-----------F----------ISNAGSLK-GVQHVILLSQLSVYRGSG------GI----Q--------ALMKGNA  210 (294)
Q Consensus       171 ~~~-----------~----------~~~~~~~~-gv~r~V~vSs~~~~~~~~------~~----~--------~~~~~~~  210 (294)
                      ++.           +          +.+++.+. +++|||++||..++....      +.    +        ...+..+
T Consensus        88 A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~  167 (338)
T PLN00198         88 ATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWG  167 (338)
T ss_pred             CCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccch
Confidence            320           0          33345554 689999999987764211      00    0        0001111


Q ss_pred             H-HHHHHHHHHH----HhCCCCEEEEEccceecCCCCCc---c-------------eee-c-cCCC----CCCCcCHHHH
Q 022625          211 R-KLAEQDESML----MASGIPYTIIRTGVLQNTPGGKQ---G-------------FQF-E-EGCA----ANGSLSKEDA  263 (294)
Q Consensus       211 ~-~~~~~ae~~l----~~~gl~~tivRPg~l~~~~~~~~---~-------------~~~-~-~g~~----~~~~Is~eDv  263 (294)
                      + ..|..+|.++    ...+++++++||+.++ ||+...   .             ..+ + .+.+    ..+++|++|+
T Consensus       168 Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vy-Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~  246 (338)
T PLN00198        168 YPASKTLAEKAAWKFAEENNIDLITVIPTLMA-GPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDV  246 (338)
T ss_pred             hHHHHHHHHHHHHHHHHhcCceEEEEeCCceE-CCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHH
Confidence            1 1233455443    3469999999999988 554211   0             000 1 1111    2588999999


Q ss_pred             HHHHHHHhhCCCCCCcEEEEecCCcccccc
Q 022625          264 AFICVEALESIPQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       264 A~~iv~aL~~~~~~g~~~~v~~g~~~~~ei  293 (294)
                      |++++.+++.+.. +..|+.++...+++|+
T Consensus       247 a~a~~~~~~~~~~-~~~~~~~~~~~s~~el  275 (338)
T PLN00198        247 CRAHIFLAEKESA-SGRYICCAANTSVPEL  275 (338)
T ss_pred             HHHHHHHhhCcCc-CCcEEEecCCCCHHHH
Confidence            9999999987543 3467655556666664

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.84  E-value=9.6e-20  Score=168.59  Aligned_cols=186  Identities=20%  Similarity=0.264  Sum_probs=132.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccchhh---hc-CCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME---SF-GTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~~~---~~-~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      .+|+|+||||+|+||++++++|+++|  ++|++++|+..+...   .. ...++++.+|++|.+.+.++++++|+|||++
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A   82 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA   82 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence            47899999999999999999999986  789999987654321   11 2368899999999999999999999999972


Q ss_pred             Cc----------------------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHH-------H
Q 022625          172 EG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESML-------M  222 (294)
Q Consensus       172 ~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l-------~  222 (294)
                      +.                      .+.+++.+.++++||++||.....+.   .+|..+     |..+|.++       .
T Consensus        83 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~p~---~~Y~~s-----K~~~E~l~~~~~~~~~  154 (324)
T TIGR03589        83 ALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAANPI---NLYGAT-----KLASDKLFVAANNISG  154 (324)
T ss_pred             ccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCC---CHHHHH-----HHHHHHHHHHHHhhcc
Confidence            20                      14456777889999999997654332   234332     22334433       3


Q ss_pred             hCCCCEEEEEccceecCCCC------------Cc-ceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCcc
Q 022625          223 ASGIPYTIIRTGVLQNTPGG------------KQ-GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNL  289 (294)
Q Consensus       223 ~~gl~~tivRPg~l~~~~~~------------~~-~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~~  289 (294)
                      ..|++++++|||.++ +++.            +. ...+..+.....+++++|++++++.+++.. ..+++|+..+...+
T Consensus       155 ~~gi~~~~lR~g~v~-G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~-~~~~~~~~~~~~~s  232 (324)
T TIGR03589       155 SKGTRFSVVRYGNVV-GSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM-LGGEIFVPKIPSMK  232 (324)
T ss_pred             ccCcEEEEEeeccee-CCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC-CCCCEEccCCCcEE
Confidence            468999999999988 4431            11 123333445567899999999999999863 34678854444455


Q ss_pred             cccc
Q 022625          290 CEQL  293 (294)
Q Consensus       290 ~~ei  293 (294)
                      +.|+
T Consensus       233 v~el  236 (324)
T TIGR03589       233 ITDL  236 (324)
T ss_pred             HHHH
Confidence            5553

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.84  E-value=8.5e-20  Score=183.90  Aligned_cols=196  Identities=13%  Similarity=0.094  Sum_probs=138.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHH-HHHHhcCCcEEEEcCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDASNKKF-LKTALRGVRSIICPSE  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~-l~~~l~~~d~Vi~~~~  172 (294)
                      .-++|+|+||||+||||++|+++|+++ |++|++++|.......... .+++++.+|++|... ++++++++|+|||+++
T Consensus       312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa  391 (660)
T PRK08125        312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVA  391 (660)
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECcc
Confidence            346789999999999999999999986 7999999998754332222 368999999998655 5778899999999721


Q ss_pred             ---c-------------------hHHhhhhhcCCCEEEEecccccccCCC-C-ch---------hcc-c-hhHHHHHHHH
Q 022625          173 ---G-------------------FISNAGSLKGVQHVILLSQLSVYRGSG-G-IQ---------ALM-K-GNARKLAEQD  217 (294)
Q Consensus       173 ---~-------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~-~-~~---------~~~-~-~~~~~~~~~a  217 (294)
                         .                   .+.+++++.+ ++|||+||..+|.... . ..         +.. + ..+...|..+
T Consensus       392 ~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~  470 (660)
T PRK08125        392 IATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLL  470 (660)
T ss_pred             ccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHH
Confidence               0                   0345677777 8999999987775311 1 00         000 0 0122234456


Q ss_pred             HHHHH----hCCCCEEEEEccceecCCCC-----------------------Ccce-eeccCCCCCCCcCHHHHHHHHHH
Q 022625          218 ESMLM----ASGIPYTIIRTGVLQNTPGG-----------------------KQGF-QFEEGCAANGSLSKEDAAFICVE  269 (294)
Q Consensus       218 e~~l~----~~gl~~tivRPg~l~~~~~~-----------------------~~~~-~~~~g~~~~~~Is~eDvA~~iv~  269 (294)
                      |.+++    ..+++++++||+.++ ||+.                       +..+ .++.|.+..+++|++|++++++.
T Consensus       471 E~~~~~~~~~~g~~~~ilR~~~vy-Gp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~  549 (660)
T PRK08125        471 DRVIWAYGEKEGLRFTLFRPFNWM-GPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFR  549 (660)
T ss_pred             HHHHHHHHHhcCCceEEEEEceee-CCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHH
Confidence            66653    468999999999988 4431                       1111 23456677899999999999999


Q ss_pred             HhhCCC--CCCcEEEEecCC--cccccc
Q 022625          270 ALESIP--QTGLIFEVCEIS--NLCEQL  293 (294)
Q Consensus       270 aL~~~~--~~g~~~~v~~g~--~~~~ei  293 (294)
                      +++++.  ..+++||+++++  .+++|+
T Consensus       550 ~l~~~~~~~~g~iyni~~~~~~~s~~el  577 (660)
T PRK08125        550 IIENKDNRCDGQIINIGNPDNEASIREL  577 (660)
T ss_pred             HHhccccccCCeEEEcCCCCCceeHHHH
Confidence            998753  357899999974  576664

>PLN02583 cinnamoyl-CoA reductase

Probab=99.84  E-value=2.1e-19  Score=164.23  Aligned_cols=191  Identities=14%  Similarity=0.138  Sum_probs=130.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc--h----hhhc--CCCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--A----MESF--GTYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~--~----~~~~--~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      .+++|+||||+|+||++++++|+++|++|++++|+.++  .    ....  +.+++++.+|++|.+.+.+++.++|+|+|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~   84 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC   84 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            46899999999999999999999999999999996432  1    1111  23688899999999999999999999998


Q ss_pred             cCC---c-----------------hHHhhhhhc-CCCEEEEeccccccc--CC-C----Cch-------hccc--hhHHH
Q 022625          170 PSE---G-----------------FISNAGSLK-GVQHVILLSQLSVYR--GS-G----GIQ-------ALMK--GNARK  212 (294)
Q Consensus       170 ~~~---~-----------------~~~~~~~~~-gv~r~V~vSs~~~~~--~~-~----~~~-------~~~~--~~~~~  212 (294)
                      ...   .                 .+.+++.+. +++|||++||..++.  +. .    ...       .+..  ..++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  164 (297)
T PLN02583         85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA  164 (297)
T ss_pred             eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence            511   0                 034455554 689999999986532  11 0    000       0000  00121


Q ss_pred             -HHHHHHHHH----HhCCCCEEEEEccceecCCCCCcce------eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEE
Q 022625          213 -LAEQDESML----MASGIPYTIIRTGVLQNTPGGKQGF------QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIF  281 (294)
Q Consensus       213 -~~~~ae~~l----~~~gl~~tivRPg~l~~~~~~~~~~------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~  281 (294)
                       .|..+|+++    +..++++++|||+.++ +|......      ....+....++|+++|+|++++.+|+.+...+ .|
T Consensus       165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~-Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~~~~-r~  242 (297)
T PLN02583        165 LAKTLSEKTAWALAMDRGVNMVSINAGLLM-GPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVSSYG-RY  242 (297)
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEcCCccc-CCCCCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCcccCC-cE
Confidence             244555555    3469999999999988 55421110      01112234578999999999999999876655 78


Q ss_pred             EEecCCccc
Q 022625          282 EVCEISNLC  290 (294)
Q Consensus       282 ~v~~g~~~~  290 (294)
                      .+.++..+.
T Consensus       243 ~~~~~~~~~  251 (297)
T PLN02583        243 LCFNHIVNT  251 (297)
T ss_pred             EEecCCCcc
Confidence            888876543

>PRK05865 hypothetical protein; Provisional

Probab=99.83  E-value=1.5e-19  Score=183.78  Aligned_cols=171  Identities=13%  Similarity=0.154  Sum_probs=134.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc------
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~------  173 (294)
                      |+|+||||+|+||++++++|+++|++|++++|+....   ...+++++.+|++|.+.+.++++++|+|||++..      
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~~~   77 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---WPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRNDH   77 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---cccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccchHH
Confidence            5799999999999999999999999999999975432   2236889999999999999999999999998321      


Q ss_pred             -------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecCCCCCc--
Q 022625          174 -------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--  244 (294)
Q Consensus       174 -------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~--  244 (294)
                             .+.+++++.++++||++||..                   |..+|.++.+++++++++||+.++ +++...  
T Consensus        78 vNv~GT~nLLeAa~~~gvkr~V~iSS~~-------------------K~aaE~ll~~~gl~~vILRp~~VY-GP~~~~~i  137 (854)
T PRK05865         78 INIDGTANVLKAMAETGTGRIVFTSSGH-------------------QPRVEQMLADCGLEWVAVRCALIF-GRNVDNWV  137 (854)
T ss_pred             HHHHHHHHHHHHHHHcCCCeEEEECCcH-------------------HHHHHHHHHHcCCCEEEEEeceEe-CCChHHHH
Confidence                   145677888999999999863                   346788888899999999999998 543110  


Q ss_pred             -----ceeeccC--CCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cccccc
Q 022625          245 -----GFQFEEG--CAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       245 -----~~~~~~g--~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                           ...+..|  ....++||++|+|++++.++..+...+.+||+++++ .+++||
T Consensus       138 ~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EI  194 (854)
T PRK05865        138 QRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRI  194 (854)
T ss_pred             HHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHH
Confidence                 1112223  334579999999999999987655567899999875 555554

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.83  E-value=3.4e-19  Score=166.50  Aligned_cols=197  Identities=15%  Similarity=0.169  Sum_probs=133.3

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-----CCCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      ....+|+||||||+||||++++++|+++|++|++++|+.++.....     ...++++.+|++|.+.+.++++++|+|||
T Consensus         6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   85 (353)
T PLN02896          6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFH   85 (353)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEE
Confidence            4456789999999999999999999999999999999876533221     23588999999999999999999999999


Q ss_pred             cCC----ch-------------------------HHhhhhhc-CCCEEEEecccccccCCC-------Cchh-----c--
Q 022625          170 PSE----GF-------------------------ISNAGSLK-GVQHVILLSQLSVYRGSG-------GIQA-----L--  205 (294)
Q Consensus       170 ~~~----~~-------------------------~~~~~~~~-gv~r~V~vSs~~~~~~~~-------~~~~-----~--  205 (294)
                      ++.    ..                         +.+++.+. ++++||++||..++....       ...+     .  
T Consensus        86 ~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~  165 (353)
T PLN02896         86 VAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDH  165 (353)
T ss_pred             CCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHH
Confidence            821    00                         22345555 488999999987764211       0000     0  


Q ss_pred             -----cchhHHH-HHHHHHHHH----HhCCCCEEEEEccceecCCCCCcce----------------eec--cCCC----
Q 022625          206 -----MKGNARK-LAEQDESML----MASGIPYTIIRTGVLQNTPGGKQGF----------------QFE--EGCA----  253 (294)
Q Consensus       206 -----~~~~~~~-~~~~ae~~l----~~~gl~~tivRPg~l~~~~~~~~~~----------------~~~--~g~~----  253 (294)
                           .+...+. .|..+|.++    +..+++++++||+.++ ||+....+                .++  .+..    
T Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vy-Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  244 (353)
T PLN02896        166 VWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVA-GPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMG  244 (353)
T ss_pred             hhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccc-CCCcCCCCCchHHHHHHHhcCCccccccccccccccC
Confidence                 0000121 244455544    4479999999999988 55421100                000  0111    


Q ss_pred             CCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCcccccc
Q 022625          254 ANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       254 ~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~~~~ei  293 (294)
                      ..++||++|+|++++.+++.+.. +..|++++.+.+++|+
T Consensus       245 ~~dfi~v~Dva~a~~~~l~~~~~-~~~~~~~~~~~s~~el  283 (353)
T PLN02896        245 SIALVHIEDICDAHIFLMEQTKA-EGRYICCVDSYDMSEL  283 (353)
T ss_pred             ceeEEeHHHHHHHHHHHHhCCCc-CccEEecCCCCCHHHH
Confidence            23789999999999999987544 3468766666677664

>PLN02686 cinnamoyl-CoA reductase

Probab=99.83  E-value=2.3e-19  Score=168.87  Aligned_cols=199  Identities=16%  Similarity=0.104  Sum_probs=132.9

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh--c---------CCCcEEeecCCCCHHHHHHHhc
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--F---------GTYVESMAGDASNKKFLKTALR  162 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~---------~~~v~~v~~D~~d~~~l~~~l~  162 (294)
                      .....+|+||||||+||||++++++|+++|++|++++|+.++....  .         ...++++.+|++|.+.+.++++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            3456689999999999999999999999999999999986543221  0         1247889999999999999999


Q ss_pred             CCcEEEEcC-----Cc---h--------------HHhhhhhc-CCCEEEEecccc--cccC---CC-C--chh-------
Q 022625          163 GVRSIICPS-----EG---F--------------ISNAGSLK-GVQHVILLSQLS--VYRG---SG-G--IQA-------  204 (294)
Q Consensus       163 ~~d~Vi~~~-----~~---~--------------~~~~~~~~-gv~r~V~vSs~~--~~~~---~~-~--~~~-------  204 (294)
                      ++|+|||+.     .+   .              +.+++.+. +++|||++||..  ++..   .. +  ...       
T Consensus       128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~  207 (367)
T PLN02686        128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES  207 (367)
T ss_pred             hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence            999999971     11   0              44566665 799999999963  2321   10 0  000       


Q ss_pred             --ccchhHHH-HHHHHHHHH----HhCCCCEEEEEccceecCCCCCcc-----------eeeccCCCCCCCcCHHHHHHH
Q 022625          205 --LMKGNARK-LAEQDESML----MASGIPYTIIRTGVLQNTPGGKQG-----------FQFEEGCAANGSLSKEDAAFI  266 (294)
Q Consensus       205 --~~~~~~~~-~~~~ae~~l----~~~gl~~tivRPg~l~~~~~~~~~-----------~~~~~g~~~~~~Is~eDvA~~  266 (294)
                        ..+..++. .|..+|.++    +..|+++++|||+.++ +|+....           .....|+....+++++|+|++
T Consensus       208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vy-Gp~~~~~~~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A  286 (367)
T PLN02686        208 FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVT-GPGFFRRNSTATIAYLKGAQEMLADGLLATADVERLAEA  286 (367)
T ss_pred             hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceE-CCCCCCCCChhHHHHhcCCCccCCCCCcCeEEHHHHHHH
Confidence              00001111 244455554    3469999999999988 5542110           001113333468999999999


Q ss_pred             HHHHhhCC--CCCCcEEEEecCCcccccc
Q 022625          267 CVEALESI--PQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       267 iv~aL~~~--~~~g~~~~v~~g~~~~~ei  293 (294)
                      ++.+++.+  ...+.+|...+...+++|+
T Consensus       287 ~~~al~~~~~~~~~~~yi~~g~~~s~~e~  315 (367)
T PLN02686        287 HVCVYEAMGNKTAFGRYICFDHVVSREDE  315 (367)
T ss_pred             HHHHHhccCCCCCCCcEEEeCCCccHHHH
Confidence            99999853  3456678444445566554

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.83  E-value=2e-19  Score=160.36  Aligned_cols=188  Identities=19%  Similarity=0.200  Sum_probs=133.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCC-CcEEeecCCCCHHHHHHHhc--CCcEEEEcCC----
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALR--GVRSIICPSE----  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~----  172 (294)
                      |+||||||+|+||++.+.+|++.|++|++++.-.....+.... ..+++++|+.|.+.+.+.|+  .+|+|||.++    
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V   80 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV   80 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccccc
Confidence            6899999999999999999999999999987644332222222 26899999999999999997  4699999722    


Q ss_pred             --c----------------hHHhhhhhcCCCEEEEecccccccCC-----------CCchhccchhHHHHHHHHHHHHH-
Q 022625          173 --G----------------FISNAGSLKGVQHVILLSQLSVYRGS-----------GGIQALMKGNARKLAEQDESMLM-  222 (294)
Q Consensus       173 --~----------------~~~~~~~~~gv~r~V~vSs~~~~~~~-----------~~~~~~~~~~~~~~~~~ae~~l~-  222 (294)
                        .                .+.++|++.|+++|||-||..+|..+           .+.++|..+     |...|+.|+ 
T Consensus        81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~s-----Klm~E~iL~d  155 (329)
T COG1087          81 GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRS-----KLMSEEILRD  155 (329)
T ss_pred             chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhH-----HHHHHHHHHH
Confidence              1                16788999999999999999887632           222344333     334555554 


Q ss_pred             ---hCCCCEEEEEccceec---------CCC--------------C--Ccceee------ccCCCCCCCcCHHHHHHHHH
Q 022625          223 ---ASGIPYTIIRTGVLQN---------TPG--------------G--KQGFQF------EEGCAANGSLSKEDAAFICV  268 (294)
Q Consensus       223 ---~~gl~~tivRPg~l~~---------~~~--------------~--~~~~~~------~~g~~~~~~Is~eDvA~~iv  268 (294)
                         +.+++++++|--...+         .+.              .  .....|      ..|.....+||+.|+|++.+
T Consensus       156 ~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~  235 (329)
T COG1087         156 AAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHV  235 (329)
T ss_pred             HHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHH
Confidence               4789999999543321         111              0  111122      24555688999999999999


Q ss_pred             HHhhCC--CCCCcEEEEecC-Cccccc
Q 022625          269 EALESI--PQTGLIFEVCEI-SNLCEQ  292 (294)
Q Consensus       269 ~aL~~~--~~~g~~~~v~~g-~~~~~e  292 (294)
                      .+|+.=  .-...+||+.+| ..++.|
T Consensus       236 ~Al~~L~~~g~~~~~NLG~G~G~SV~e  262 (329)
T COG1087         236 LALKYLKEGGSNNIFNLGSGNGFSVLE  262 (329)
T ss_pred             HHHHHHHhCCceeEEEccCCCceeHHH
Confidence            988642  222369999998 455554

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.82  E-value=6.9e-19  Score=163.73  Aligned_cols=191  Identities=10%  Similarity=0.002  Sum_probs=130.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-----hhhhc-------CCCcEEeecCCCCHHHHHHHhcC--Cc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF-------GTYVESMAGDASNKKFLKTALRG--VR  165 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~-------~~~v~~v~~D~~d~~~l~~~l~~--~d  165 (294)
                      |+||||||+||||++++++|+++|++|++++|+.+.     .....       ...++++.+|++|.+.+.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999997642     11111       23588999999999999999985  59


Q ss_pred             EEEEcCCc----------------------hHHhhhhhcCCC---EEEEecccccccCCCC--c---hhccchhH-HHHH
Q 022625          166 SIICPSEG----------------------FISNAGSLKGVQ---HVILLSQLSVYRGSGG--I---QALMKGNA-RKLA  214 (294)
Q Consensus       166 ~Vi~~~~~----------------------~~~~~~~~~gv~---r~V~vSs~~~~~~~~~--~---~~~~~~~~-~~~~  214 (294)
                      +|||++..                      .+.+++.+.+++   +||++||..+|.....  .   .+..+... ...|
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK  160 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK  160 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence            99998320                      044556666764   8999999887753210  0   01111111 2234


Q ss_pred             HHHHHHHH----hCCCCEEEEEccceecCCC--C----------------Cc--ceeeccCCCCCCCcCHHHHHHHHHHH
Q 022625          215 EQDESMLM----ASGIPYTIIRTGVLQNTPG--G----------------KQ--GFQFEEGCAANGSLSKEDAAFICVEA  270 (294)
Q Consensus       215 ~~ae~~l~----~~gl~~tivRPg~l~~~~~--~----------------~~--~~~~~~g~~~~~~Is~eDvA~~iv~a  270 (294)
                      ..+|.+++    ..++++++.|+...+ +|+  .                +.  ...++.|.+..+++|++|+|++++.+
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~-gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~  239 (343)
T TIGR01472       161 LYAHWITVNYREAYGLFAVNGILFNHE-SPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLM  239 (343)
T ss_pred             HHHHHHHHHHHHHhCCceEEEeecccC-CCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHH
Confidence            45555553    358888888876544 221  0                11  12235567789999999999999999


Q ss_pred             hhCCCCCCcEEEEecC-Ccccccc
Q 022625          271 LESIPQTGLIFEVCEI-SNLCEQL  293 (294)
Q Consensus       271 L~~~~~~g~~~~v~~g-~~~~~ei  293 (294)
                      +.++.  +.+|||+++ ..+++|+
T Consensus       240 ~~~~~--~~~yni~~g~~~s~~e~  261 (343)
T TIGR01472       240 LQQDK--PDDYVIATGETHSVREF  261 (343)
T ss_pred             HhcCC--CccEEecCCCceeHHHH
Confidence            87643  368999987 4455543

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.82  E-value=5.8e-19  Score=160.93  Aligned_cols=189  Identities=22%  Similarity=0.272  Sum_probs=134.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCC-cEEEEcCC-------
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV-RSIICPSE-------  172 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~-d~Vi~~~~-------  172 (294)
                      .||||||+||||++|+++|+++|++|++++|...+..... ..++++.+|++|.+.+.+.+.++ |+|||+..       
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~~   80 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDS   80 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-cccceeeecccchHHHHHHHhcCCCEEEEccccCchhhh
Confidence            4999999999999999999999999999999877654333 56889999999998888889988 99999811       


Q ss_pred             --c----h----------HHhhhhhcCCCEEEEecccccccCC-C--Cch----hccchh-HHHHHHHHHHHHHh----C
Q 022625          173 --G----F----------ISNAGSLKGVQHVILLSQLSVYRGS-G--GIQ----ALMKGN-ARKLAEQDESMLMA----S  224 (294)
Q Consensus       173 --~----~----------~~~~~~~~gv~r~V~vSs~~~~~~~-~--~~~----~~~~~~-~~~~~~~ae~~l~~----~  224 (294)
                        .    +          +.+++++.++++|||.||..++... .  +..    +..+.. +...|..+|..+..    .
T Consensus        81 ~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~~  160 (314)
T COG0451          81 NASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLY  160 (314)
T ss_pred             hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence              0    1          3456777899999998886654422 1  111    111111 22235566776655    4


Q ss_pred             CCCEEEEEccceecCCCCCcc-----e---------------eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 022625          225 GIPYTIIRTGVLQNTPGGKQG-----F---------------QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVC  284 (294)
Q Consensus       225 gl~~tivRPg~l~~~~~~~~~-----~---------------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~  284 (294)
                      +++++++||+.++ +++....     .               ....+.....+++++|++++++.+++++...  +||++
T Consensus       161 ~~~~~ilR~~~vy-Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~--~~ni~  237 (314)
T COG0451         161 GLPVVILRPFNVY-GPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG--VFNIG  237 (314)
T ss_pred             CCCeEEEeeeeee-CCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc--EEEeC
Confidence            7999999999888 4442111     0               0012233346899999999999999986654  99999


Q ss_pred             cCC--cccccc
Q 022625          285 EIS--NLCEQL  293 (294)
Q Consensus       285 ~g~--~~~~ei  293 (294)
                      ++.  .+++||
T Consensus       238 ~~~~~~~~~e~  248 (314)
T COG0451         238 SGTAEITVREL  248 (314)
T ss_pred             CCCCcEEHHHH
Confidence            984  556554

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.81  E-value=1e-18  Score=176.30  Aligned_cols=193  Identities=19%  Similarity=0.209  Sum_probs=134.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCc--cchhhh----cCCCcEEeecCCCCHHHHHHHh--cCCcEEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDK--RNAMES----FGTYVESMAGDASNKKFLKTAL--RGVRSII  168 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~R~~--~~~~~~----~~~~v~~v~~D~~d~~~l~~~l--~~~d~Vi  168 (294)
                      .|+||||||+||||++++++|+++  +++|++++|..  +.....    ...+++++.+|++|.+.+..++  .++|+||
T Consensus         6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi   85 (668)
T PLN02260          6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM   85 (668)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence            589999999999999999999998  68999888743  121111    1246899999999998887765  5789999


Q ss_pred             EcCCc----------------------hHHhhhhhcC-CCEEEEecccccccCCCCc--------hhccchh-HHHHHHH
Q 022625          169 CPSEG----------------------FISNAGSLKG-VQHVILLSQLSVYRGSGGI--------QALMKGN-ARKLAEQ  216 (294)
Q Consensus       169 ~~~~~----------------------~~~~~~~~~g-v~r~V~vSs~~~~~~~~~~--------~~~~~~~-~~~~~~~  216 (294)
                      |++..                      .+.+++++.+ ++||||+||..+|......        .+..+.. +...|..
T Consensus        86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~  165 (668)
T PLN02260         86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAG  165 (668)
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHH
Confidence            98221                      1445677776 8999999998877532210        0011111 1223555


Q ss_pred             HHHHHH----hCCCCEEEEEccceecCCCCC---------------cc-eeeccCCCCCCCcCHHHHHHHHHHHhhCCCC
Q 022625          217 DESMLM----ASGIPYTIIRTGVLQNTPGGK---------------QG-FQFEEGCAANGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       217 ae~~l~----~~gl~~tivRPg~l~~~~~~~---------------~~-~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      +|.+++    +.+++++++||+.++ ++...               .. ..++.|.+..++||++|+|++++.+++.. .
T Consensus       166 aE~~v~~~~~~~~l~~vilR~~~Vy-Gp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~-~  243 (668)
T PLN02260        166 AEMLVMAYGRSYGLPVITTRGNNVY-GPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG-E  243 (668)
T ss_pred             HHHHHHHHHHHcCCCEEEECccccc-CcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcC-C
Confidence            666654    368999999999988 44321               11 12244566678999999999999988653 4


Q ss_pred             CCcEEEEecCC-cccccc
Q 022625          277 TGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       277 ~g~~~~v~~g~-~~~~ei  293 (294)
                      .+++||+++++ .++.|+
T Consensus       244 ~~~vyni~~~~~~s~~el  261 (668)
T PLN02260        244 VGHVYNIGTKKERRVIDV  261 (668)
T ss_pred             CCCEEEECCCCeeEHHHH
Confidence            57899999874 455554

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.81  E-value=1.8e-18  Score=156.43  Aligned_cols=176  Identities=16%  Similarity=0.204  Sum_probs=127.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCC--cEEEEcCCc-----
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPSEG-----  173 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~--d~Vi~~~~~-----  173 (294)
                      +|+||||+|+||++++++|+++|++|++++|.               .+|+.|.+.+.++++++  |+|||+.+.     
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~   65 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDG   65 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------ccCCCCHHHHHHHHHhCCCCEEEECCccccccc
Confidence            58999999999999999999999999999885               47999999999999876  999998210     


Q ss_pred             -----------------hHHhhhhhcCCCEEEEecccccccCCCC--chh---ccc-hhHHHHHHHHHHHHHhCCCCEEE
Q 022625          174 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQA---LMK-GNARKLAEQDESMLMASGIPYTI  230 (294)
Q Consensus       174 -----------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~~---~~~-~~~~~~~~~ae~~l~~~gl~~ti  230 (294)
                                       .+.+++++.+. +||++||..+|.....  ..+   ..+ ..+...|..+|.+++..++++++
T Consensus        66 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~~~~~~i  144 (287)
T TIGR01214        66 AESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAAGPNALI  144 (287)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHhCCCeEE
Confidence                             03344556664 8999999877643211  100   001 11223466789988888999999


Q ss_pred             EEccceecCCCCCcc-------------eeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cccccc
Q 022625          231 IRTGVLQNTPGGKQG-------------FQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       231 vRPg~l~~~~~~~~~-------------~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      +||+.++ ++.....             .....++...++++++|+|++++.++..+...+++||+++++ .+..|+
T Consensus       145 lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s~~e~  220 (287)
T TIGR01214       145 VRTSWLY-GGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCSWYEF  220 (287)
T ss_pred             EEeeecc-cCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcCHHHH
Confidence            9999988 3321100             011123445788999999999999998765668899999864 555443

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.81  E-value=2.2e-18  Score=153.16  Aligned_cols=186  Identities=18%  Similarity=0.161  Sum_probs=136.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCe--EEEEEc-----CccchhhhcC-CCcEEeecCCCCHHHHHHHhcC--CcEEEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTR--IKALVK-----DKRNAMESFG-TYVESMAGDASNKKFLKTALRG--VRSIIC  169 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~--V~~~~R-----~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~  169 (294)
                      |++|||||+||||+.++++++++..+  |+.++.     +.+.+..... +...++++|+.|.+.+.++++.  .|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            68999999999999999999998654  455543     2233333333 5899999999999999999984  799999


Q ss_pred             cC-C-----------ch----------HHhhhhhcCCC-EEEEecccccccCC-------------CCchhccchhHHHH
Q 022625          170 PS-E-----------GF----------ISNAGSLKGVQ-HVILLSQLSVYRGS-------------GGIQALMKGNARKL  213 (294)
Q Consensus       170 ~~-~-----------~~----------~~~~~~~~gv~-r~V~vSs~~~~~~~-------------~~~~~~~~~~~~~~  213 (294)
                      .+ +           .|          +.+++++...+ ||++|||+-+|+..             .+..+|..+|+...
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD  160 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD  160 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence            72 1           11          66777777654 99999999887531             12223333332221


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCC----------------CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCC
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPG----------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQT  277 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~----------------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~  277 (294)
                      . .+..+.+..|++++|.|++.-+ ||.                +.....++.|.+...|++++|-++++-.+|++ +..
T Consensus       161 ~-lVray~~TYglp~~ItrcSNNY-GPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~k-g~~  237 (340)
T COG1088         161 L-LVRAYVRTYGLPATITRCSNNY-GPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTK-GKI  237 (340)
T ss_pred             H-HHHHHHHHcCCceEEecCCCCc-CCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhc-CcC
Confidence            1 2344455689999999999866 543                33445667899999999999999999999987 555


Q ss_pred             CcEEEEecCCc
Q 022625          278 GLIFEVCEISN  288 (294)
Q Consensus       278 g~~~~v~~g~~  288 (294)
                      |++|||.++.+
T Consensus       238 GE~YNIgg~~E  248 (340)
T COG1088         238 GETYNIGGGNE  248 (340)
T ss_pred             CceEEeCCCcc
Confidence            99999998864

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.80  E-value=1.5e-18  Score=167.01  Aligned_cols=189  Identities=15%  Similarity=0.065  Sum_probs=128.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh----hc-CCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SF-GTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~-~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..++|+||||||+||||++|+++|+++|++|++++|......+    .+ ..+++++.+|+.+.     ++.++|+|||+
T Consensus       116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHl  190 (442)
T PLN02206        116 KRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHL  190 (442)
T ss_pred             ccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEe
Confidence            3356899999999999999999999999999999875322111    11 23678888998774     35679999998


Q ss_pred             CC-----c-----------------hHHhhhhhcCCCEEEEecccccccCCCC--c--------hhccc-hhHHHHHHHH
Q 022625          171 SE-----G-----------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I--------QALMK-GNARKLAEQD  217 (294)
Q Consensus       171 ~~-----~-----------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~--------~~~~~-~~~~~~~~~a  217 (294)
                      +.     .                 .+.++|++.++ +||++||..+|.....  .        .+... ..+...|..+
T Consensus       191 Aa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~a  269 (442)
T PLN02206        191 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTA  269 (442)
T ss_pred             eeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHH
Confidence            31     0                 14566777886 8999999988753210  0        01100 1112234455


Q ss_pred             HHHHH----hCCCCEEEEEccceecCCCC------------------CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          218 ESMLM----ASGIPYTIIRTGVLQNTPGG------------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       218 e~~l~----~~gl~~tivRPg~l~~~~~~------------------~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      |.++.    ..+++++++||+.++ +++.                  .....++.|.+..++++++|+|++++.+++.+ 
T Consensus       270 E~~~~~y~~~~g~~~~ilR~~~vy-Gp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~-  347 (442)
T PLN02206        270 ETLTMDYHRGANVEVRIARIFNTY-GPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-  347 (442)
T ss_pred             HHHHHHHHHHhCCCeEEEEecccc-CCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC-
Confidence            65553    468999999999888 4321                  11122345566678999999999999988754 


Q ss_pred             CCCcEEEEecCC-cccccc
Q 022625          276 QTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       276 ~~g~~~~v~~g~-~~~~ei  293 (294)
                       .+.+||+++++ .+++||
T Consensus       348 -~~g~yNIgs~~~~sl~El  365 (442)
T PLN02206        348 -HVGPFNLGNPGEFTMLEL  365 (442)
T ss_pred             -CCceEEEcCCCceeHHHH
Confidence             34589999864 566664

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.80  E-value=2.6e-18  Score=156.70  Aligned_cols=191  Identities=15%  Similarity=0.106  Sum_probs=128.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCcc-----chhhhc-CCCcEEeecCCCCHHHHHHHhcC--CcEEEEc
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR-----NAMESF-GTYVESMAGDASNKKFLKTALRG--VRSIICP  170 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~-----~~~~~~-~~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~~  170 (294)
                      +|+||||||+||++++++|+++|  ++|+++.|...     ...... ...++++.+|++|.+++.+++++  +|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            58999999999999999999987  78988876321     111111 23688899999999999999987  8999998


Q ss_pred             CCc----------------------hHHhhhhhcCCC-EEEEecccccccCCCCc---h---hccch-hHHHHHHHHHHH
Q 022625          171 SEG----------------------FISNAGSLKGVQ-HVILLSQLSVYRGSGGI---Q---ALMKG-NARKLAEQDESM  220 (294)
Q Consensus       171 ~~~----------------------~~~~~~~~~gv~-r~V~vSs~~~~~~~~~~---~---~~~~~-~~~~~~~~ae~~  220 (294)
                      ++.                      .+.+++.+.+.+ ++|++||..++......   .   +..+. .+-..|..+|.+
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  160 (317)
T TIGR01181        81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHL  160 (317)
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHH
Confidence            321                      133455565443 89999998765432110   0   00000 111123344444


Q ss_pred             H----HhCCCCEEEEEccceecCCCC---------------C-cceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcE
Q 022625          221 L----MASGIPYTIIRTGVLQNTPGG---------------K-QGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLI  280 (294)
Q Consensus       221 l----~~~gl~~tivRPg~l~~~~~~---------------~-~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~  280 (294)
                      +    .+.+++++++||+.++ ++..               + ....++.+....+++|++|+|+++..++++ ...+++
T Consensus       161 ~~~~~~~~~~~~~i~R~~~i~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~-~~~~~~  238 (317)
T TIGR01181       161 VRAYHRTYGLPALITRCSNNY-GPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEK-GRVGET  238 (317)
T ss_pred             HHHHHHHhCCCeEEEEecccc-CCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcC-CCCCce
Confidence            3    3578999999999988 4321               1 112234555667899999999999999875 445789


Q ss_pred             EEEecCC-cccccc
Q 022625          281 FEVCEIS-NLCEQL  293 (294)
Q Consensus       281 ~~v~~g~-~~~~ei  293 (294)
                      |++++++ .+..|+
T Consensus       239 ~~~~~~~~~s~~~~  252 (317)
T TIGR01181       239 YNIGGGNERTNLEV  252 (317)
T ss_pred             EEeCCCCceeHHHH
Confidence            9998874 454543

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.80  E-value=1.3e-18  Score=167.08  Aligned_cols=187  Identities=17%  Similarity=0.101  Sum_probs=127.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc----hhhhcC-CCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~----~~~~~~-~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      +.|+|+||||+||||++|+++|+++|++|++++|....    ...... ..++++.+|+.+.     .+.++|+|||++.
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlAa  193 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLAC  193 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECce
Confidence            45799999999999999999999999999999885322    111111 3578888898764     3568999999831


Q ss_pred             ---c-------------------hHHhhhhhcCCCEEEEecccccccCCCC--c--------hhccchh-HHHHHHHHHH
Q 022625          173 ---G-------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I--------QALMKGN-ARKLAEQDES  219 (294)
Q Consensus       173 ---~-------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~--------~~~~~~~-~~~~~~~ae~  219 (294)
                         .                   .+.++|++.++ +||++||..+|.....  .        .+..+.. +-..|..+|.
T Consensus       194 ~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~  272 (436)
T PLN02166        194 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET  272 (436)
T ss_pred             eccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHH
Confidence               0                   14556777775 8999999988753211  0        0111111 1122445555


Q ss_pred             HHH----hCCCCEEEEEccceecCCCC------------------CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCC
Q 022625          220 MLM----ASGIPYTIIRTGVLQNTPGG------------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQT  277 (294)
Q Consensus       220 ~l~----~~gl~~tivRPg~l~~~~~~------------------~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~  277 (294)
                      +++    ..+++++++||+.++ |++.                  .....++.+.+..++++++|++++++.+++.+  .
T Consensus       273 ~~~~y~~~~~l~~~ilR~~~vY-Gp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~--~  349 (436)
T PLN02166        273 LAMDYHRGAGVEVRIARIFNTY-GPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGE--H  349 (436)
T ss_pred             HHHHHHHHhCCCeEEEEEcccc-CCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC--C
Confidence            543    468999999999988 4431                  11122345566788999999999999988754  2


Q ss_pred             CcEEEEecCC-cccccc
Q 022625          278 GLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       278 g~~~~v~~g~-~~~~ei  293 (294)
                      +.+||+++++ .+++|+
T Consensus       350 ~giyNIgs~~~~Si~el  366 (436)
T PLN02166        350 VGPFNLGNPGEFTMLEL  366 (436)
T ss_pred             CceEEeCCCCcEeHHHH
Confidence            4699998864 566654

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.80  E-value=4.8e-18  Score=157.27  Aligned_cols=194  Identities=18%  Similarity=0.149  Sum_probs=129.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh-------hcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR--GVRSIICP  170 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~  170 (294)
                      |+|+||||+|+||++++++|+++|++|+++.|..+....       .....+.++.+|++|.+.+.++++  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            589999999999999999999999999998765332111       112357788999999999998886  58999998


Q ss_pred             CCc----------------------hHHhhhhhcCCCEEEEecccccccCCCC--ch---hc-c-chhHHHHHHHHHHHH
Q 022625          171 SEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ---AL-M-KGNARKLAEQDESML  221 (294)
Q Consensus       171 ~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~---~~-~-~~~~~~~~~~ae~~l  221 (294)
                      ++.                      .+.+++++.++++||++||..++.....  ..   +. . ...+...|..+|.++
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~  160 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence            210                      1445677789999999999877642210  00   00 0 111112344556555


Q ss_pred             Hh-----CCCCEEEEEccceecC-------CCC-----------------Cc-ce-ee------ccCCCCCCCcCHHHHH
Q 022625          222 MA-----SGIPYTIIRTGVLQNT-------PGG-----------------KQ-GF-QF------EEGCAANGSLSKEDAA  264 (294)
Q Consensus       222 ~~-----~gl~~tivRPg~l~~~-------~~~-----------------~~-~~-~~------~~g~~~~~~Is~eDvA  264 (294)
                      +.     .+++++++|++.++..       +..                 .. .+ .+      +.|.+..++++++|+|
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a  240 (338)
T PRK10675        161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA  240 (338)
T ss_pred             HHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHH
Confidence            42     4789999998665521       100                 00 01 11      1244457899999999


Q ss_pred             HHHHHHhhCC--CCCCcEEEEecCC-cccccc
Q 022625          265 FICVEALESI--PQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       265 ~~iv~aL~~~--~~~g~~~~v~~g~-~~~~ei  293 (294)
                      ++++.+++..  ...+++||+++++ .+++||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~  272 (338)
T PRK10675        241 DGHVAAMEKLANKPGVHIYNLGAGVGSSVLDV  272 (338)
T ss_pred             HHHHHHHHhhhccCCCceEEecCCCceeHHHH
Confidence            9999999752  2345899999775 566664

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3.1e-18  Score=172.15  Aligned_cols=193  Identities=12%  Similarity=0.146  Sum_probs=133.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHH--HCCCeEEEEEcCccc--hhhh---cC-CCcEEeecCCCCH------HHHHHHhcCCc
Q 022625          100 DAVLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRN--AMES---FG-TYVESMAGDASNK------KFLKTALRGVR  165 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~--~~g~~V~~~~R~~~~--~~~~---~~-~~v~~v~~D~~d~------~~l~~~l~~~d  165 (294)
                      |+|||||||||||++++++|+  ..|++|++++|+...  ....   .. .+++++.+|++|+      +.++++ +++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            589999999999999999999  589999999997532  1111   11 4689999999983      455555 8999


Q ss_pred             EEEEcCCc-------------------hHHhhhhhcCCCEEEEecccccccCCCCch--------hccchhHHHHHHHHH
Q 022625          166 SIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ--------ALMKGNARKLAEQDE  218 (294)
Q Consensus       166 ~Vi~~~~~-------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~--------~~~~~~~~~~~~~ae  218 (294)
                      +|||+++.                   .+.+++.+.++++||++||..++.......        ......+...|..+|
T Consensus        80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  159 (657)
T PRK07201         80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAE  159 (657)
T ss_pred             EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHH
Confidence            99998321                   145667888899999999988764321100        000011223466788


Q ss_pred             HHHHh-CCCCEEEEEccceecCCCCCcc-----------------------eeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          219 SMLMA-SGIPYTIIRTGVLQNTPGGKQG-----------------------FQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       219 ~~l~~-~gl~~tivRPg~l~~~~~~~~~-----------------------~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      .++++ .+++++++||+.+++....+..                       ..+..+....++++++|++++++.++..+
T Consensus       160 ~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~  239 (657)
T PRK07201        160 KLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHKD  239 (657)
T ss_pred             HHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcCc
Confidence            88874 7899999999998842111000                       00112233457899999999999998877


Q ss_pred             CCCCcEEEEecC-Ccccccc
Q 022625          275 PQTGLIFEVCEI-SNLCEQL  293 (294)
Q Consensus       275 ~~~g~~~~v~~g-~~~~~ei  293 (294)
                      ...+++||++++ ..++.|+
T Consensus       240 ~~~g~~~ni~~~~~~s~~el  259 (657)
T PRK07201        240 GRDGQTFHLTDPKPQRVGDI  259 (657)
T ss_pred             CCCCCEEEeCCCCCCcHHHH
Confidence            777899999986 4455543

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.79  E-value=4.7e-18  Score=158.37  Aligned_cols=191  Identities=14%  Similarity=0.097  Sum_probs=127.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCc--cc---hhhhc-CCCcEEeecCCCCHHHHHHHhcC--CcEEEEc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK--RN---AMESF-GTYVESMAGDASNKKFLKTALRG--VRSIICP  170 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~-V~~~~R~~--~~---~~~~~-~~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~~  170 (294)
                      |+|+||||+||||++++++|+++|++ |+++.+..  ..   ..... ...++++.+|++|.+++.+++++  +|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            57999999999999999999999976 44444422  11   11111 23577899999999999999974  7999998


Q ss_pred             CCc----------------------hHHhhhhhc---------CCCEEEEecccccccCCC-----------C-c---hh
Q 022625          171 SEG----------------------FISNAGSLK---------GVQHVILLSQLSVYRGSG-----------G-I---QA  204 (294)
Q Consensus       171 ~~~----------------------~~~~~~~~~---------gv~r~V~vSs~~~~~~~~-----------~-~---~~  204 (294)
                      ++.                      .+.++|.+.         ++++||++||..++....           + .   .+
T Consensus        81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~  160 (352)
T PRK10084         81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTA  160 (352)
T ss_pred             CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCC
Confidence            321                      033445442         567999999987765310           0 0   01


Q ss_pred             ccchhHH-HHHHHHHHHH----HhCCCCEEEEEccceecCCCC---------------Ccc-eeeccCCCCCCCcCHHHH
Q 022625          205 LMKGNAR-KLAEQDESML----MASGIPYTIIRTGVLQNTPGG---------------KQG-FQFEEGCAANGSLSKEDA  263 (294)
Q Consensus       205 ~~~~~~~-~~~~~ae~~l----~~~gl~~tivRPg~l~~~~~~---------------~~~-~~~~~g~~~~~~Is~eDv  263 (294)
                      +.+...+ ..|..+|.++    +..+++++++||+.++ ||..               +.. ..++.|++..++++++|+
T Consensus       161 ~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~-Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~  239 (352)
T PRK10084        161 YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNY-GPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (352)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccee-CCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHH
Confidence            1111111 1244455444    3468999999999988 4432               111 233556777899999999


Q ss_pred             HHHHHHHhhCCCCCCcEEEEecCCc-cccc
Q 022625          264 AFICVEALESIPQTGLIFEVCEISN-LCEQ  292 (294)
Q Consensus       264 A~~iv~aL~~~~~~g~~~~v~~g~~-~~~e  292 (294)
                      |++++.+++. ...+++||+++++. ++.|
T Consensus       240 a~a~~~~l~~-~~~~~~yni~~~~~~s~~~  268 (352)
T PRK10084        240 ARALYKVVTE-GKAGETYNIGGHNEKKNLD  268 (352)
T ss_pred             HHHHHHHHhc-CCCCceEEeCCCCcCcHHH
Confidence            9999998876 34578999998754 4444

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.79  E-value=8.6e-18  Score=156.10  Aligned_cols=194  Identities=12%  Similarity=0.008  Sum_probs=130.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-----hhhh------cCCCcEEeecCCCCHHHHHHHhcC--
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES------FGTYVESMAGDASNKKFLKTALRG--  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~------~~~~v~~v~~D~~d~~~l~~~l~~--  163 (294)
                      ..+|+||||||+||||++++++|+++|++|+++.|..+.     +...      .+..++++.+|++|.+++.++++.  
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   83 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK   83 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence            347899999999999999999999999999999987542     1111      123578999999999999999885  


Q ss_pred             CcEEEEcCCc----------------------hHHhhhhhcCCC-----EEEEecccccccCCCCc----hhccchhH-H
Q 022625          164 VRSIICPSEG----------------------FISNAGSLKGVQ-----HVILLSQLSVYRGSGGI----QALMKGNA-R  211 (294)
Q Consensus       164 ~d~Vi~~~~~----------------------~~~~~~~~~gv~-----r~V~vSs~~~~~~~~~~----~~~~~~~~-~  211 (294)
                      +|+|||++..                      .+.+++.+.+++     +||++||..+|......    .+..+... .
T Consensus        84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~  163 (340)
T PLN02653         84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYA  163 (340)
T ss_pred             CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhH
Confidence            5999998321                      034456666765     89999998777532210    00111111 1


Q ss_pred             HHHHHHHHHHH----hCCCCEEEEEccceecCCCC------------------Cc--ceeeccCCCCCCCcCHHHHHHHH
Q 022625          212 KLAEQDESMLM----ASGIPYTIIRTGVLQNTPGG------------------KQ--GFQFEEGCAANGSLSKEDAAFIC  267 (294)
Q Consensus       212 ~~~~~ae~~l~----~~gl~~tivRPg~l~~~~~~------------------~~--~~~~~~g~~~~~~Is~eDvA~~i  267 (294)
                      ..|..+|.+++    +.++.++..|+...+ +|+.                  +.  ...++.|.+..++++++|+|+++
T Consensus       164 ~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~-gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~  242 (340)
T PLN02653        164 VAKVAAHWYTVNYREAYGLFACNGILFNHE-SPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAM  242 (340)
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEeeecccc-CCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHH
Confidence            22445555543    367777777765544 2211                  11  11235567778999999999999


Q ss_pred             HHHhhCCCCCCcEEEEecCC-cccccc
Q 022625          268 VEALESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       268 v~aL~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      +.++....  +..||+++++ .+++|+
T Consensus       243 ~~~~~~~~--~~~yni~~g~~~s~~e~  267 (340)
T PLN02653        243 WLMLQQEK--PDDYVVATEESHTVEEF  267 (340)
T ss_pred             HHHHhcCC--CCcEEecCCCceeHHHH
Confidence            99997642  4689999874 455554

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.79  E-value=1.2e-18  Score=157.16  Aligned_cols=182  Identities=17%  Similarity=0.211  Sum_probs=126.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhh---c----C-CCcE----EeecCCCCHHHHHHHhc--CCcE
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---F----G-TYVE----SMAGDASNKKFLKTALR--GVRS  166 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---~----~-~~v~----~v~~D~~d~~~l~~~l~--~~d~  166 (294)
                      ||||||+|+||++||++|++.+. ++++++|++.++...   +    + ..++    .+.+|+.|.+.+.++++  +.|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            79999999999999999999985 799999998764322   2    2 2344    45899999999999999  7899


Q ss_pred             EEEcCC--------c--------------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHh-
Q 022625          167 IICPSE--------G--------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA-  223 (294)
Q Consensus       167 Vi~~~~--------~--------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~-  223 (294)
                      |||++.        .              .++++|.++++++||++||+++.+|.+.++..        |+.+|.++.. 
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~PtnvmGat--------KrlaE~l~~~~  152 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTNVMGAT--------KRLAEKLVQAA  152 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--SHHHHH--------HHHHHHHHHHH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCcHHHHH--------HHHHHHHHHHH
Confidence            999822        0              16778899999999999999999988877765        7888998875 


Q ss_pred             ------CCCCEEEEEccceecCCC-----------CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecC
Q 022625          224 ------SGIPYTIIRTGVLQNTPG-----------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEI  286 (294)
Q Consensus       224 ------~gl~~tivRPg~l~~~~~-----------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g  286 (294)
                            .+.++++||.|.+.+..+           .+..+.+...+...-++++++.++.+++++.. ...|++|.+--|
T Consensus       153 ~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~-~~~geifvl~mg  231 (293)
T PF02719_consen  153 NQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAAL-AKGGEIFVLDMG  231 (293)
T ss_dssp             CCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH---TTEEEEE---
T ss_pred             hhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhh-CCCCcEEEecCC
Confidence                  247899999999885444           23334444445556678999999999998866 445788888774


Q ss_pred             -Cccccc
Q 022625          287 -SNLCEQ  292 (294)
Q Consensus       287 -~~~~~e  292 (294)
                       +..+.|
T Consensus       232 ~~v~I~d  238 (293)
T PF02719_consen  232 EPVKILD  238 (293)
T ss_dssp             TCEECCC
T ss_pred             CCcCHHH
Confidence             444444

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02240 UDP-glucose 4-epimerase

Probab=99.79  E-value=1.1e-17  Score=155.74  Aligned_cols=197  Identities=15%  Similarity=0.142  Sum_probs=132.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch-------hhh---cCCCcEEeecCCCCHHHHHHHhc--CC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------MES---FGTYVESMAGDASNKKFLKTALR--GV  164 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~-------~~~---~~~~v~~v~~D~~d~~~l~~~l~--~~  164 (294)
                      +.+++|+||||+|+||++++++|+++|++|++++|.....       ...   ...+++++.+|++|.+.+.++++  ++
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~   82 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF   82 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence            4578999999999999999999999999999998753221       111   12358899999999999998886  57


Q ss_pred             cEEEEcCCc----------------------hHHhhhhhcCCCEEEEecccccccCCCC--ch---hccch-hHHHHHHH
Q 022625          165 RSIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ---ALMKG-NARKLAEQ  216 (294)
Q Consensus       165 d~Vi~~~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~---~~~~~-~~~~~~~~  216 (294)
                      |+|||+++.                      .+.+++++.++++||++||..++.....  ..   +..+. .+...|..
T Consensus        83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~  162 (352)
T PLN02240         83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLF  162 (352)
T ss_pred             CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHH
Confidence            999998320                      1445677788999999999877642211  00   01011 11223446


Q ss_pred             HHHHHHh-----CCCCEEEEEccceecC---------CCC--------------Cc--ce-ee------ccCCCCCCCcC
Q 022625          217 DESMLMA-----SGIPYTIIRTGVLQNT---------PGG--------------KQ--GF-QF------EEGCAANGSLS  259 (294)
Q Consensus       217 ae~~l~~-----~gl~~tivRPg~l~~~---------~~~--------------~~--~~-~~------~~g~~~~~~Is  259 (294)
                      +|.+++.     .+++++++|++.+++.         +..              +.  .+ .+      +.|.+..++|+
T Consensus       163 ~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~  242 (352)
T PLN02240        163 IEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIH  242 (352)
T ss_pred             HHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEE
Confidence            6666542     4688999998765521         100              00  01 11      13455578899


Q ss_pred             HHHHHHHHHHHhhCC----CCCCcEEEEecCC-cccccc
Q 022625          260 KEDAAFICVEALESI----PQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       260 ~eDvA~~iv~aL~~~----~~~g~~~~v~~g~-~~~~ei  293 (294)
                      ++|+|++++.++...    ...+++||+++++ .+++|+
T Consensus       243 v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el  281 (352)
T PLN02240        243 VMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEM  281 (352)
T ss_pred             HHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHH
Confidence            999999999888642    3446899998875 455554

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.78  E-value=5.7e-18  Score=154.99  Aligned_cols=179  Identities=18%  Similarity=0.169  Sum_probs=118.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEcCCc----
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG----  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~~----  173 (294)
                      |+||||||+||||++++++|+++| +|+++.|...           .+.+|++|.+.+.++++  ++|+|||++..    
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~   68 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVD   68 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCcc
Confidence            589999999999999999999999 7888887532           34689999999999998  47999998210    


Q ss_pred             ------------------hHHhhhhhcCCCEEEEecccccccCCC--Cc---hhccchhHH-HHHHHHHHHHHhCCCCEE
Q 022625          174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSG--GI---QALMKGNAR-KLAEQDESMLMASGIPYT  229 (294)
Q Consensus       174 ------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~--~~---~~~~~~~~~-~~~~~ae~~l~~~gl~~t  229 (294)
                                        .++++|++.|+ +||++||..+|....  +.   .+..+...+ ..|..+|.++.....+++
T Consensus        69 ~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~~~  147 (299)
T PRK09987         69 KAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEHCAKHL  147 (299)
T ss_pred             hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEE
Confidence                              14556777785 799999988874321  11   011111222 346678898888777899


Q ss_pred             EEEccceecCCCCC-------------ccee-ecc--CCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-ccccc
Q 022625          230 IIRTGVLQNTPGGK-------------QGFQ-FEE--GCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-NLCEQ  292 (294)
Q Consensus       230 ivRPg~l~~~~~~~-------------~~~~-~~~--g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-~~~~e  292 (294)
                      ++||+.++ +|+..             ..+. ++.  |.........+|++.++..++..+.. +.+||+++++ .++.|
T Consensus       148 ilR~~~vy-Gp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~-~giyni~~~~~~s~~e  225 (299)
T PRK09987        148 IFRTSWVY-AGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV-AGLYHLVASGTTTWHD  225 (299)
T ss_pred             EEecceec-CCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC-CCeEEeeCCCCccHHH
Confidence            99999998 44311             1111 111  11111222345566667666654333 3699999865 55555


Q ss_pred             c
Q 022625          293 L  293 (294)
Q Consensus       293 i  293 (294)
                      +
T Consensus       226 ~  226 (299)
T PRK09987        226 Y  226 (299)
T ss_pred             H
Confidence            4

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=1.7e-17  Score=145.80  Aligned_cols=191  Identities=16%  Similarity=0.153  Sum_probs=130.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh-------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .++|+|+||||+|+||++++++|+++|++|+++.|...+..+       ..+.+++++.+|++|.+++.++++       
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            356899999999999999999999999999888876653211       123468899999999998887764       


Q ss_pred             CCcEEEEcCC-----ch---------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          163 GVRSIICPSE-----GF---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       163 ~~d~Vi~~~~-----~~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      ++|+|||+.+     .+                     +.+    .+++.+.++||++||...+.+......|..++.. 
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~  163 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGL  163 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHH
Confidence            5699999732     10                     111    2345678999999998876554444445443321 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce--eecc--CCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF--QFEE--GCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~--~~~~--g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                       .+.+.....+...+++++++|||.+++........  ....  ......+++.+|+++++.+++....  ..|++|++.
T Consensus       164 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~  243 (249)
T PRK12825        164 VGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSDASDYITGQVIEVT  243 (249)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeC
Confidence             12222333344579999999999988433211100  0111  2233457899999999999997653  468999999


Q ss_pred             cCC
Q 022625          285 EIS  287 (294)
Q Consensus       285 ~g~  287 (294)
                      +|.
T Consensus       244 ~g~  246 (249)
T PRK12825        244 GGV  246 (249)
T ss_pred             CCE
Confidence            874

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.78  E-value=1.4e-17  Score=138.61  Aligned_cols=180  Identities=16%  Similarity=0.217  Sum_probs=133.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC----c--
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE----G--  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~----~--  173 (294)
                      |+|.|.||||.+|+++++.+..+||+|++++|++++....  +.+.+++.|+.|+.++.+.+.+.|+||.+-.    +  
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~   78 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDND   78 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--ccceeecccccChhhhHhhhcCCceEEEeccCCCCChh
Confidence            6899999999999999999999999999999999987654  5688999999999999999999999999811    1  


Q ss_pred             --------hHHhhhhhcCCCEEEEecccccc---cC------CCCchhccchhHHHHHHHHHHHHH-hCCCCEEEEEccc
Q 022625          174 --------FISNAGSLKGVQHVILLSQLSVY---RG------SGGIQALMKGNARKLAEQDESMLM-ASGIPYTIIRTGV  235 (294)
Q Consensus       174 --------~~~~~~~~~gv~r~V~vSs~~~~---~~------~~~~~~~~~~~~~~~~~~ae~~l~-~~gl~~tivRPg~  235 (294)
                              .+.+..+.+++.|++.+...+..   ..      +..+.+|.+ .++...+.. +.|+ +..++||.|.|..
T Consensus        79 ~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~-~A~~~ae~L-~~Lr~~~~l~WTfvSPaa  156 (211)
T COG2910          79 ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKP-EALAQAEFL-DSLRAEKSLDWTFVSPAA  156 (211)
T ss_pred             HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHH-HHHHHHHHH-HHHhhccCcceEEeCcHH
Confidence                    14556677799999999765432   11      111222211 111122222 3344 3569999999998


Q ss_pred             eecCCCCCcc-e-----eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 022625          236 LQNTPGGKQG-F-----QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVC  284 (294)
Q Consensus       236 l~~~~~~~~~-~-----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~  284 (294)
                      ++ .|+...+ +     .+..+..+.++||.+|.|-+++..++++.+.++.|.+.
T Consensus       157 ~f-~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv~  210 (211)
T COG2910         157 FF-EPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQHIRQRFTVA  210 (211)
T ss_pred             hc-CCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence            76 3442222 1     22234556789999999999999999999999999875

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.78  E-value=1.3e-17  Score=148.02  Aligned_cols=190  Identities=16%  Similarity=0.125  Sum_probs=131.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      .+++++||||+|+||++++++|+++|++|+++.|++++....      .+..++++.+|++|.+++.++++       .+
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999999988764332      13468889999999998877765       57


Q ss_pred             cEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--H
Q 022625          165 RSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K  212 (294)
Q Consensus       165 d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~  212 (294)
                      |+|||+++.     .                         +...+++.+.++||++||...+.+..+...|...+..  .
T Consensus        83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~  162 (258)
T PRK12429         83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIG  162 (258)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHHH
Confidence            999997321     0                         1223455678999999998776555555555443321  1


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCCC--------cce--------eeccCCCCCCCcCHHHHHHHHHHHhhCCC-
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGF--------QFEEGCAANGSLSKEDAAFICVEALESIP-  275 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~--------~~~--------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-  275 (294)
                      +.+.....+...+++++++|||.+.......        ...        .+........+++.+|+|++++.++..+. 
T Consensus       163 ~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~  242 (258)
T PRK12429        163 LTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAK  242 (258)
T ss_pred             HHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCcccc
Confidence            1122222234478999999999876311100        000        11122334678999999999999987643 


Q ss_pred             -CCCcEEEEecCC
Q 022625          276 -QTGLIFEVCEIS  287 (294)
Q Consensus       276 -~~g~~~~v~~g~  287 (294)
                       ..|+.|++.+|-
T Consensus       243 ~~~g~~~~~~~g~  255 (258)
T PRK12429        243 GVTGQAWVVDGGW  255 (258)
T ss_pred             CccCCeEEeCCCE
Confidence             458999998773

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.77  E-value=3.3e-17  Score=143.48  Aligned_cols=187  Identities=14%  Similarity=0.147  Sum_probs=130.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh----hcCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      +++|+++||||+|+||+.++++|+++|++|+++.|++++..+    ......+++.+|+.|.+++.++++       ++|
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD   84 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence            457999999999999999999999999999999998765332    223457888899999988877665       579


Q ss_pred             EEEEcCCch--------------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH--HH
Q 022625          166 SIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL  213 (294)
Q Consensus       166 ~Vi~~~~~~--------------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~  213 (294)
                      +|||+.+..                          +.+    .+...+.++||++||...+.+......|...+..  .+
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~  164 (239)
T PRK12828         85 ALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARL  164 (239)
T ss_pred             EEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHHHH
Confidence            999973210                          111    1234578899999999877665555455433321  11


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      .+.....+...++++++||||.+... ......   .......+++++|+|+++..++.+..  ..|+.+.+.++.
T Consensus       165 ~~~~a~~~~~~~i~~~~i~pg~v~~~-~~~~~~---~~~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~~  236 (239)
T PRK12828        165 TEALAAELLDRGITVNAVLPSIIDTP-PNRADM---PDADFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDGGV  236 (239)
T ss_pred             HHHHHHHhhhcCeEEEEEecCcccCc-chhhcC---CchhhhcCCCHHHHHHHHHHHhCcccccccceEEEecCCE
Confidence            22222334457899999999998732 211111   11122447899999999999998653  468999998875

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.77  E-value=3.1e-17  Score=144.87  Aligned_cols=194  Identities=16%  Similarity=0.135  Sum_probs=131.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +.+|+|+||||+|+||++++++|+++|++|++++|+.++....      ....+.++.+|++|.+++.++++       .
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4578999999999999999999999999999999986543321      12358889999999998888775       5


Q ss_pred             CcEEEEcCCc-------------h-------------HHhh----hhhcCCCEEEEecccccc-cCCCCchhccchhHH-
Q 022625          164 VRSIICPSEG-------------F-------------ISNA----GSLKGVQHVILLSQLSVY-RGSGGIQALMKGNAR-  211 (294)
Q Consensus       164 ~d~Vi~~~~~-------------~-------------~~~~----~~~~gv~r~V~vSs~~~~-~~~~~~~~~~~~~~~-  211 (294)
                      +|+|||+.+.             +             +.+.    +.+.+.++||++||..++ .+......|..++.. 
T Consensus        84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~  163 (251)
T PRK12826         84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGL  163 (251)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHHH
Confidence            7999998311             0             1111    245567899999998776 333333344333321 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce-----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF-----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~-----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                       .+.+.....+...+++++++|||.+.+........     .+........+++.+|+|.+++.++..+.  ..|++|++
T Consensus       164 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~  243 (251)
T PRK12826        164 VGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTLPV  243 (251)
T ss_pred             HHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcEEEE
Confidence             12223333344579999999999987321111100     11112222367899999999999886654  36899999


Q ss_pred             ecCCccc
Q 022625          284 CEISNLC  290 (294)
Q Consensus       284 ~~g~~~~  290 (294)
                      .+|....
T Consensus       244 ~~g~~~~  250 (251)
T PRK12826        244 DGGATLP  250 (251)
T ss_pred             CCCccCC
Confidence            8876543

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.77  E-value=1.7e-17  Score=147.68  Aligned_cols=190  Identities=16%  Similarity=0.077  Sum_probs=129.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhcC-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALRG-------  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~~-------  163 (294)
                      +.+++++||||+|+||++++++|+++|++|+++.|++++..+.      .+..+.++.+|++|.+++.++++.       
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4579999999999999999999999999999999988653322      123577899999999988777653       


Q ss_pred             CcEEEEcCCc-------------h-----------------HHhhh-hhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          164 VRSIICPSEG-------------F-----------------ISNAG-SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       164 ~d~Vi~~~~~-------------~-----------------~~~~~-~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      +|+|||+.+.             +                 +.+.+ +..+.++||++||............|..++.. 
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~  164 (262)
T PRK13394         85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGL  164 (262)
T ss_pred             CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHHH
Confidence            7999998221             0                 12234 55678899999998766544444445443321 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc--------ce--------eeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--------GF--------QFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~--------~~--------~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                       .+.+.....+...++++++||||.+........        ..        .+..+.....+++++|++++++.++..+
T Consensus       165 ~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~  244 (262)
T PRK13394        165 LGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFP  244 (262)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCcc
Confidence             111111222334689999999998763211000        00        0112334467899999999999999765


Q ss_pred             C--CCCcEEEEecC
Q 022625          275 P--QTGLIFEVCEI  286 (294)
Q Consensus       275 ~--~~g~~~~v~~g  286 (294)
                      .  ..|+.|++.+|
T Consensus       245 ~~~~~g~~~~~~~g  258 (262)
T PRK13394        245 SAALTGQSFVVSHG  258 (262)
T ss_pred             ccCCcCCEEeeCCc
Confidence            3  35788988876

>PLN02996 fatty acyl-CoA reductase

Probab=99.76  E-value=1.1e-17  Score=162.88  Aligned_cols=197  Identities=14%  Similarity=0.179  Sum_probs=134.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEEcCccc------hh-hh-----c---------------CCCcE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRN------AM-ES-----F---------------GTYVE  145 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~R~~~~------~~-~~-----~---------------~~~v~  145 (294)
                      -..+|+|+|||||||+|+.++.+|++.+.   +|++++|....      .. +.     +               ..+++
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            34689999999999999999999998653   67899996632      11 10     1               14688


Q ss_pred             EeecCCC-------CHHHHHHHhcCCcEEEEcCCc-------------------hHHhhhhhc-CCCEEEEecccccccC
Q 022625          146 SMAGDAS-------NKKFLKTALRGVRSIICPSEG-------------------FISNAGSLK-GVQHVILLSQLSVYRG  198 (294)
Q Consensus       146 ~v~~D~~-------d~~~l~~~l~~~d~Vi~~~~~-------------------~~~~~~~~~-gv~r~V~vSs~~~~~~  198 (294)
                      ++.+|++       +.+.++++++++|+|||++..                   .+.+++++. ++++||++||..++..
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~  167 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGE  167 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecC
Confidence            9999998       455577888999999998321                   044556664 7899999999987643


Q ss_pred             CCCc-----hh----c------------------------------------------------cchhHHHHHHHHHHHH
Q 022625          199 SGGI-----QA----L------------------------------------------------MKGNARKLAEQDESML  221 (294)
Q Consensus       199 ~~~~-----~~----~------------------------------------------------~~~~~~~~~~~ae~~l  221 (294)
                      ..+.     .+    +                                                .+..+...|..+|.++
T Consensus       168 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv  247 (491)
T PLN02996        168 KSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLL  247 (491)
T ss_pred             CCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHH
Confidence            1100     00    0                                                0011222455778877


Q ss_pred             Hh--CCCCEEEEEccceecCCCCC--------------------cc---eeeccCCCCCCCcCHHHHHHHHHHHhhCC--
Q 022625          222 MA--SGIPYTIIRTGVLQNTPGGK--------------------QG---FQFEEGCAANGSLSKEDAAFICVEALESI--  274 (294)
Q Consensus       222 ~~--~gl~~tivRPg~l~~~~~~~--------------------~~---~~~~~g~~~~~~Is~eDvA~~iv~aL~~~--  274 (294)
                      .+  .+++++++||+.+++ +...                    .+   ..++.|+....+++++|++++++.++...  
T Consensus       248 ~~~~~~lpv~i~RP~~V~G-~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~  326 (491)
T PLN02996        248 GNFKENLPLVIIRPTMITS-TYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAG  326 (491)
T ss_pred             HHhcCCCCEEEECCCEecc-CCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhc
Confidence            65  589999999999873 2210                    01   12345667789999999999999998753  


Q ss_pred             C-CCCcEEEEecC---Ccccccc
Q 022625          275 P-QTGLIFEVCEI---SNLCEQL  293 (294)
Q Consensus       275 ~-~~g~~~~v~~g---~~~~~ei  293 (294)
                      . ..+.+||++++   +.++.|+
T Consensus       327 ~~~~~~vYNi~s~~~~~~s~~ei  349 (491)
T PLN02996        327 GQGSEIIYHVGSSLKNPVKFSNL  349 (491)
T ss_pred             cCCCCcEEEecCCCCCcccHHHH
Confidence            2 34689999988   3455543

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.76  E-value=1e-17  Score=153.36  Aligned_cols=184  Identities=14%  Similarity=0.062  Sum_probs=117.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HH-HHHHhc-----CCcEEEEcCC
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KF-LKTALR-----GVRSIICPSE  172 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~-l~~~l~-----~~d~Vi~~~~  172 (294)
                      |+||||+||||++|+++|+++|++++++.|+.......    ..+..+|+.|.   +. ++++++     ++|+|||+++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~   77 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF----VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGA   77 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH----HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECce
Confidence            79999999999999999999999888887765432111    12234555543   33 333432     6899999731


Q ss_pred             --------c------------hHHhhhhhcCCCEEEEecccccccCCCC--chh---ccc-hhHHHHHHHHHHHHH----
Q 022625          173 --------G------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQA---LMK-GNARKLAEQDESMLM----  222 (294)
Q Consensus       173 --------~------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~~---~~~-~~~~~~~~~ae~~l~----  222 (294)
                              .            .+.++|++.++ +||++||..+|.....  ...   ..+ +.+...|..+|++++    
T Consensus        78 ~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~  156 (308)
T PRK11150         78 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILP  156 (308)
T ss_pred             ecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence                    0            14566778887 6999999987753211  100   011 111112334454443    


Q ss_pred             hCCCCEEEEEccceecCCCCCc-------------------ce-ee-ccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEE
Q 022625          223 ASGIPYTIIRTGVLQNTPGGKQ-------------------GF-QF-EEGCAANGSLSKEDAAFICVEALESIPQTGLIF  281 (294)
Q Consensus       223 ~~gl~~tivRPg~l~~~~~~~~-------------------~~-~~-~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~  281 (294)
                      +.+++++++||+.++ +++...                   .. .+ +.+....+++|++|+|++++.+++..  .+.+|
T Consensus       157 ~~~~~~~~lR~~~vy-G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~--~~~~y  233 (308)
T PRK11150        157 EANSQICGFRYFNVY-GPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENG--VSGIF  233 (308)
T ss_pred             HcCCCEEEEeeeeec-CCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcC--CCCeE
Confidence            468999999999988 443110                   00 11 11233468899999999999988764  25699


Q ss_pred             EEecCC-cccccc
Q 022625          282 EVCEIS-NLCEQL  293 (294)
Q Consensus       282 ~v~~g~-~~~~ei  293 (294)
                      |++++. .+++|+
T Consensus       234 ni~~~~~~s~~el  246 (308)
T PRK11150        234 NCGTGRAESFQAV  246 (308)
T ss_pred             EcCCCCceeHHHH
Confidence            999885 466665

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.76  E-value=1.6e-17  Score=151.36  Aligned_cols=175  Identities=13%  Similarity=0.040  Sum_probs=120.6

Q ss_pred             EEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcC--CcEEEEcCCc-------
Q 022625          103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG-------  173 (294)
Q Consensus       103 lVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~~~~~-------  173 (294)
                      |||||+||||++|+++|+++|++|+++.+.              ..+|++|.+.+.++++.  +|+|||+++.       
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~   66 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHAN   66 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchh
Confidence            699999999999999999999998866432              14899999999998874  6999998310       


Q ss_pred             ----------------hHHhhhhhcCCCEEEEecccccccCCCC--ch-------hccc-hh-HHHHHHHHH----HHHH
Q 022625          174 ----------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ-------ALMK-GN-ARKLAEQDE----SMLM  222 (294)
Q Consensus       174 ----------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~-------~~~~-~~-~~~~~~~ae----~~l~  222 (294)
                                      .+.+++++.+++|||++||..+|.+...  ..       +..+ .. +...|..+|    .+.+
T Consensus        67 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~  146 (306)
T PLN02725         67 MTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRI  146 (306)
T ss_pred             hhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence                            0455678889999999999888753211  00       0001 11 111233333    3445


Q ss_pred             hCCCCEEEEEccceecCCCCC-----------------------ccee--eccCCCCCCCcCHHHHHHHHHHHhhCCCCC
Q 022625          223 ASGIPYTIIRTGVLQNTPGGK-----------------------QGFQ--FEEGCAANGSLSKEDAAFICVEALESIPQT  277 (294)
Q Consensus       223 ~~gl~~tivRPg~l~~~~~~~-----------------------~~~~--~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~  277 (294)
                      ..+++++++||+.++ |++..                       ....  ++.|.+..+++|++|++++++.+++... .
T Consensus       147 ~~~~~~~~~R~~~vy-G~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~-~  224 (306)
T PLN02725        147 QYGWDAISGMPTNLY-GPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYS-G  224 (306)
T ss_pred             HhCCCEEEEEeccee-CCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhccc-c
Confidence            579999999999988 44321                       0011  2345666789999999999999998643 3


Q ss_pred             CcEEEEecCC-cccccc
Q 022625          278 GLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       278 g~~~~v~~g~-~~~~ei  293 (294)
                      ...||++++. .+++|+
T Consensus       225 ~~~~ni~~~~~~s~~e~  241 (306)
T PLN02725        225 AEHVNVGSGDEVTIKEL  241 (306)
T ss_pred             CcceEeCCCCcccHHHH
Confidence            4678998764 355553

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.76  E-value=2.3e-17  Score=147.09  Aligned_cols=179  Identities=17%  Similarity=0.129  Sum_probs=133.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-------CCcEEeecCCCCHHHHHHHhc------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-------TYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-------~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      ...+++++|||||++||.+++++|+++|++|+++.|+.+++.++..       -.++++.+|+++++.+.+..+      
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            3467899999999999999999999999999999999998665432       257889999999988877653      


Q ss_pred             -CCcEEEEcCC-----ch-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 -GVRSIICPSE-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 -~~d~Vi~~~~-----~~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                       .+|++|++++     .|                         +..-+.+.+-.+||+++|..++.+.+.+..|..+|+.
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~  162 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAF  162 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHH
Confidence             4799999832     11                         1122556677899999999999888777777666642


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                        .+-+.....|+..|+.++.|.||.+....................+++.+|+|+..+..+.+.
T Consensus       163 v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~  227 (265)
T COG0300         163 VLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKALEKG  227 (265)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEEecCccccccccccccccccccchhhccCHHHHHHHHHHHHhcC
Confidence              334455666777999999999998763332211111112223456789999999999999773

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=5e-17  Score=143.65  Aligned_cols=190  Identities=15%  Similarity=0.088  Sum_probs=130.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-----CCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      ..+++++||||+|+||++++++|+++|++|++++|++++.....     +..+.++.+|++|.+++.++++       .+
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            45789999999999999999999999999999999986644321     1357789999999999987765       46


Q ss_pred             cEEEEcCCc------h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH-
Q 022625          165 RSIICPSEG------F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-  212 (294)
Q Consensus       165 d~Vi~~~~~------~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~-  212 (294)
                      |+|||+.+.      +                         +...+.+.+.++||++||..++.+......|..++... 
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~  162 (251)
T PRK07231         83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVI  162 (251)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHHH
Confidence            999998321      0                         11223446778999999998877666655564444221 


Q ss_pred             -HHHHHHHHHHhCCCCEEEEEccceecCCCCC--------cceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       213 -~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~--------~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                       +.+.....+...+++++.++||++.......        ....+........+++++|+|.+++.++..+.  ..|..+
T Consensus       163 ~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~  242 (251)
T PRK07231        163 TLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGVTL  242 (251)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCCCCeE
Confidence             1122222233458999999999875321110        00011122334567899999999999997654  347778


Q ss_pred             EEecC
Q 022625          282 EVCEI  286 (294)
Q Consensus       282 ~v~~g  286 (294)
                      .+.+|
T Consensus       243 ~~~gg  247 (251)
T PRK07231        243 VVDGG  247 (251)
T ss_pred             EECCC
Confidence            88665

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.76  E-value=3e-17  Score=145.41  Aligned_cols=190  Identities=15%  Similarity=0.104  Sum_probs=127.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHh-------cCCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------RGVR  165 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l-------~~~d  165 (294)
                      ++++|||||+|+||++++++|+++|++|+++.|+.++....      .+.+++++.+|+.|.+++.+++       .+.|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            47899999999999999999999999999999987654322      1246888999999998665544       4579


Q ss_pred             EEEEcCCc-------------h-------------HH----hhhhhcCCCEEEEecccccccCCCCchhccchhHH--HH
Q 022625          166 SIICPSEG-------------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL  213 (294)
Q Consensus       166 ~Vi~~~~~-------------~-------------~~----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~  213 (294)
                      +|||+.+.             +             +.    +.+++.++++||++||...+.+......|..++..  .+
T Consensus        81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~  160 (255)
T TIGR01963        81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGL  160 (255)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHHH
Confidence            99997210             0             11    12355678899999998765544444444443321  11


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCC--------CCcce--------eeccCCCCCCCcCHHHHHHHHHHHhhCCC--
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPG--------GKQGF--------QFEEGCAANGSLSKEDAAFICVEALESIP--  275 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~--------~~~~~--------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--  275 (294)
                      .+.....+...+++++++||+.++....        .....        .+..+.....+++++|+|++++.++..+.  
T Consensus       161 ~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~  240 (255)
T TIGR01963       161 TKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAG  240 (255)
T ss_pred             HHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccC
Confidence            1112222334689999999998763210        00000        01123344578999999999999997643  


Q ss_pred             CCCcEEEEecCCc
Q 022625          276 QTGLIFEVCEISN  288 (294)
Q Consensus       276 ~~g~~~~v~~g~~  288 (294)
                      ..++.|++.+|..
T Consensus       241 ~~g~~~~~~~g~~  253 (255)
T TIGR01963       241 ITGQAIVLDGGWT  253 (255)
T ss_pred             ccceEEEEcCccc
Confidence            4688999987643

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.75  E-value=2.1e-17  Score=145.90  Aligned_cols=183  Identities=15%  Similarity=0.082  Sum_probs=142.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cC--CCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~--~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      +|-.+-|+|||||+|+.++.+|.+.|.+|++-.|..+.-...   .+  .++-+...|+.|+++++++++..++||+..+
T Consensus        60 sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIG  139 (391)
T KOG2865|consen   60 SGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIG  139 (391)
T ss_pred             cceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeec
Confidence            478899999999999999999999999999999976532221   22  2688899999999999999999999999721


Q ss_pred             ------c------------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEcc
Q 022625          173 ------G------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTG  234 (294)
Q Consensus       173 ------~------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg  234 (294)
                            .            .++..|++.|+.|||++|+.++.-       -.++.....|...|..+++.--..||+||.
T Consensus       140 rd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv-------~s~Sr~LrsK~~gE~aVrdafPeAtIirPa  212 (391)
T KOG2865|consen  140 RDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANV-------KSPSRMLRSKAAGEEAVRDAFPEATIIRPA  212 (391)
T ss_pred             cccccCCcccccccchHHHHHHHHHHhhChhheeehhhccccc-------cChHHHHHhhhhhHHHHHhhCCcceeechh
Confidence                  1            167789999999999999988541       122344455667888888877789999999


Q ss_pred             ceecCCC----------C--CcceeeccCC-CCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 022625          235 VLQNTPG----------G--KQGFQFEEGC-AANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       235 ~l~~~~~----------~--~~~~~~~~g~-~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                      .+++...          .  +....+..|+ .....+++-|||.+|+.++.+|...|++|+..++.
T Consensus       213 ~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~  278 (391)
T KOG2865|consen  213 DIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPD  278 (391)
T ss_pred             hhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCc
Confidence            9884332          1  1112233442 34677899999999999999999999999998874

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.75  E-value=6.7e-17  Score=147.92  Aligned_cols=193  Identities=19%  Similarity=0.221  Sum_probs=127.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-----CCcEEeecCCCCHHHHHHHhc--CCcEEEEcCCc
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALR--GVRSIICPSEG  173 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~~  173 (294)
                      +|+||||+|+||+.++++|+++|++|+++.|..........     ..++++.+|+++.+.+.++++  ++|+|||+.+.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            58999999999999999999999999988654322111111     146788999999999999886  58999998321


Q ss_pred             ----------------------hHHhhhhhcCCCEEEEecccccccCCCC--ch---hccc-hhHHHHHHHHHHHHH---
Q 022625          174 ----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ---ALMK-GNARKLAEQDESMLM---  222 (294)
Q Consensus       174 ----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~---~~~~-~~~~~~~~~ae~~l~---  222 (294)
                                            .+.+++.+.++++||++||..++.....  ..   +..+ ..+...|..+|.+++   
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~  160 (328)
T TIGR01179        81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLS  160 (328)
T ss_pred             cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHH
Confidence                                  0345567788899999999876542211  00   0000 111123444555443   


Q ss_pred             -h-CCCCEEEEEccceecCCCC----------C--------------ccee-------eccCCCCCCCcCHHHHHHHHHH
Q 022625          223 -A-SGIPYTIIRTGVLQNTPGG----------K--------------QGFQ-------FEEGCAANGSLSKEDAAFICVE  269 (294)
Q Consensus       223 -~-~gl~~tivRPg~l~~~~~~----------~--------------~~~~-------~~~g~~~~~~Is~eDvA~~iv~  269 (294)
                       + .+++++++||+.+++....          .              ..+.       ...|....++|+++|+|++++.
T Consensus       161 ~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~  240 (328)
T TIGR01179       161 KADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLA  240 (328)
T ss_pred             HhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHH
Confidence             3 6899999999887732110          0              0000       0123344678999999999999


Q ss_pred             HhhCC--CCCCcEEEEecC-Ccccccc
Q 022625          270 ALESI--PQTGLIFEVCEI-SNLCEQL  293 (294)
Q Consensus       270 aL~~~--~~~g~~~~v~~g-~~~~~ei  293 (294)
                      ++...  ...+++||++++ ..+.+||
T Consensus       241 ~~~~~~~~~~~~~~n~~~~~~~s~~ei  267 (328)
T TIGR01179       241 ALEYLLNGGESHVYNLGYGQGFSVLEV  267 (328)
T ss_pred             HHhhhhcCCCcceEEcCCCCcccHHHH
Confidence            98753  245789999876 4566554

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.75  E-value=8.8e-17  Score=149.23  Aligned_cols=192  Identities=16%  Similarity=0.187  Sum_probs=128.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccch------hhhc----------C-CCcEEeecCCCC------HH
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA------MESF----------G-TYVESMAGDASN------KK  155 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~------~~~~----------~-~~v~~v~~D~~d------~~  155 (294)
                      +|+||||||+||++++++|+++|  ++|++++|+.+..      .+..          . .+++++.+|+++      .+
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  6799999986521      1110          1 468899999875      35


Q ss_pred             HHHHHhcCCcEEEEcCCc-------------------hHHhhhhhcCCCEEEEecccccccCCCCc-----h----hc--
Q 022625          156 FLKTALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----Q----AL--  205 (294)
Q Consensus       156 ~l~~~l~~~d~Vi~~~~~-------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~-----~----~~--  205 (294)
                      .+..+..++|+|||+...                   .+.+++.+.++++||++||.+++......     .    ..  
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~  160 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPG  160 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccc
Confidence            677778899999998321                   14456777888999999999876432110     0    00  


Q ss_pred             cchhHHHHHHHHHHHHHh---CCCCEEEEEccceecCCCCCc----c------------eeeccCCC-CCCCcCHHHHHH
Q 022625          206 MKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQ----G------------FQFEEGCA-ANGSLSKEDAAF  265 (294)
Q Consensus       206 ~~~~~~~~~~~ae~~l~~---~gl~~tivRPg~l~~~~~~~~----~------------~~~~~g~~-~~~~Is~eDvA~  265 (294)
                      ....+...|..+|.+++.   .|++++++|||.+++....+.    .            ..++.... ..++++++|+|+
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva~  240 (367)
T TIGR01746       161 LAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVAR  240 (367)
T ss_pred             cCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHHH
Confidence            000111223345555543   599999999999884322110    0            01122222 356899999999


Q ss_pred             HHHHHhhCCCC--CCcEEEEecC-Cccccc
Q 022625          266 ICVEALESIPQ--TGLIFEVCEI-SNLCEQ  292 (294)
Q Consensus       266 ~iv~aL~~~~~--~g~~~~v~~g-~~~~~e  292 (294)
                      +++.++..+..  .+++|+++++ ..+++|
T Consensus       241 ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e  270 (367)
T TIGR01746       241 AIVALSSQPAASAGGPVFHVVNPEPVSLDE  270 (367)
T ss_pred             HHHHHHhCCCcccCCceEEecCCCCCCHHH
Confidence            99999877653  2789999985 344443

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.75  E-value=8.9e-17  Score=141.17  Aligned_cols=191  Identities=13%  Similarity=0.096  Sum_probs=128.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhcC-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALRG-------  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~~-------  163 (294)
                      +++++|+||||+|+||++++++|+++|++|+++.|++.+....      .+.+++++.+|++|++++.+++++       
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA   82 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3568999999999999999999999999999999998664322      124688899999999888776654       


Q ss_pred             CcEEEEcCCch--------------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          164 VRSIICPSEGF--------------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       164 ~d~Vi~~~~~~--------------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      +|+|||+.+..                          +.+    .+.+.++++||++||.....+......|..++..  
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~  162 (246)
T PRK05653         83 LDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVI  162 (246)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHHH
Confidence            59999983210                          111    1245677899999998665444444445433321  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCC-cce---eeccCCCCCCCcCHHHHHHHHHHHhhCC--CCCCcEEEEec
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGF---QFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVCE  285 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-~~~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~--~~~g~~~~v~~  285 (294)
                      .+.+.....+...+++++++|||.+....... ...   .+........+++++|+++++..++...  ...+++|++.+
T Consensus       163 ~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g  242 (246)
T PRK05653        163 GFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVIPVNG  242 (246)
T ss_pred             HHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence            11222223344578999999999876322211 000   0111122355688899999999998653  34689999988


Q ss_pred             CC
Q 022625          286 IS  287 (294)
Q Consensus       286 g~  287 (294)
                      |.
T Consensus       243 g~  244 (246)
T PRK05653        243 GM  244 (246)
T ss_pred             Ce
Confidence            75

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.74  E-value=8.2e-17  Score=144.79  Aligned_cols=174  Identities=15%  Similarity=0.133  Sum_probs=124.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHHhc-------CCcEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRSI  167 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~-------~~d~V  167 (294)
                      +.+++++||||+|+||++++++|+++|++|+++.|+++++.+...  ..++++.+|++|.+++.++++       ++|++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   82 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVL   82 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            357899999999999999999999999999999999877544321  247889999999988766553       46999


Q ss_pred             EEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHH
Q 022625          168 ICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE  215 (294)
Q Consensus       168 i~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~  215 (294)
                      ||+.+.     +                         +...+.+.+..+||++||..+..+......|..+|..  .+.+
T Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  162 (273)
T PRK07825         83 VNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTD  162 (273)
T ss_pred             EECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHHHH
Confidence            998321     0                         1223456677899999998877666555566554431  2333


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      ..+..+...|+++++|+||++........     .+......++++|+|+.++.++.++.
T Consensus       163 ~l~~el~~~gi~v~~v~Pg~v~t~~~~~~-----~~~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        163 AARLELRGTGVHVSVVLPSFVNTELIAGT-----GGAKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHhhccCcEEEEEeCCcCcchhhccc-----ccccCCCCCCHHHHHHHHHHHHhCCC
Confidence            44445667899999999998763321111     11223457899999999999998754

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.74  E-value=4.7e-17  Score=146.97  Aligned_cols=185  Identities=17%  Similarity=0.104  Sum_probs=117.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc--------
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG--------  173 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~--------  173 (294)
                      ||||||+|+||++++++|+++|++|++++|++.+........    ..|+.. ..+.+.+.++|+|||+++.        
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~~   75 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG----YKPWAP-LAESEALEGADAVINLAGEPIADKRWT   75 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee----eecccc-cchhhhcCCCCEEEECCCCCcccccCC
Confidence            689999999999999999999999999999887643222111    112222 4456678899999998321        


Q ss_pred             ----------------hHHhhhhhcCCC--EEEEecccccccCCC--Cchhcc---ch-hHHHHHHHHHHH---HHhCCC
Q 022625          174 ----------------FISNAGSLKGVQ--HVILLSQLSVYRGSG--GIQALM---KG-NARKLAEQDESM---LMASGI  226 (294)
Q Consensus       174 ----------------~~~~~~~~~gv~--r~V~vSs~~~~~~~~--~~~~~~---~~-~~~~~~~~ae~~---l~~~gl  226 (294)
                                      .+.+++++.+++  +||+.|+...+....  ......   +. .....+...|..   +++.++
T Consensus        76 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  155 (292)
T TIGR01777        76 EERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQAAEDLGT  155 (292)
T ss_pred             HHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhhchhcCC
Confidence                            034456777764  566666655554221  110100   00 011112222332   344689


Q ss_pred             CEEEEEccceecCCCCC------------cceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cccccc
Q 022625          227 PYTIIRTGVLQNTPGGK------------QGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       227 ~~tivRPg~l~~~~~~~------------~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      +++++||+.++ ++...            ....++.++...++|+++|+|+++..++.++.. +.+|++++++ .+..||
T Consensus       156 ~~~ilR~~~v~-G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~~~~~~~~s~~di  233 (292)
T TIGR01777       156 RVVLLRTGIVL-GPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASI-SGPVNATAPEPVRNKEF  233 (292)
T ss_pred             ceEEEeeeeEE-CCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCccc-CCceEecCCCccCHHHH
Confidence            99999999998 44321            011233456678999999999999999987554 4689998764 455554

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.2e-16  Score=143.89  Aligned_cols=192  Identities=15%  Similarity=0.125  Sum_probs=128.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--------CCCcEEeecCCCCHHHHHHHhc------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|++++.....        ..++.++.+|++|.+++.++++      
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45799999999999999999999999999999999876533211        2357888999999988887765      


Q ss_pred             -CCcEEEEcCCc------h---------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 -GVRSIICPSEG------F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 -~~d~Vi~~~~~------~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                       .+|++||+.+.      +                     +..    .+.+.+..+||++||.....+......|..+|.
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~  164 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKS  164 (276)
T ss_pred             CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHHH
Confidence             57999998321      0                     111    122234569999999887765555555544433


Q ss_pred             HH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCc----ce--eeccCCCCCCCcCHHHHHHHHHHHhhCCCC--CCcE
Q 022625          211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF--QFEEGCAANGSLSKEDAAFICVEALESIPQ--TGLI  280 (294)
Q Consensus       211 ~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~--~g~~  280 (294)
                      ..  +.+.....+..+++++++||||.+........    ..  .+........+++++|+|+++++++.++..  .+++
T Consensus       165 a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~  244 (276)
T PRK05875        165 AVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQV  244 (276)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCCCE
Confidence            11  11222222334689999999998753221100    00  011122223456899999999999987653  5899


Q ss_pred             EEEecCCc
Q 022625          281 FEVCEISN  288 (294)
Q Consensus       281 ~~v~~g~~  288 (294)
                      |++.+|..
T Consensus       245 ~~~~~g~~  252 (276)
T PRK05875        245 INVDGGHM  252 (276)
T ss_pred             EEECCCee
Confidence            99988754

>PRK09186 flagellin modification protein A; Provisional

Probab=99.74  E-value=6.6e-17  Score=143.60  Aligned_cols=191  Identities=15%  Similarity=0.111  Sum_probs=124.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------c-CCCcEEeecCCCCHHHHHHHhcC-----
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALRG-----  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~l~~~l~~-----  163 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+++++.+.       . ...+.++.+|++|++++.++++.     
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            3579999999999999999999999999999999987764322       1 12456779999999988887763     


Q ss_pred             --CcEEEEcCCc----------------h-----------------HHhhhhhcCCCEEEEecccccccCCC--------
Q 022625          164 --VRSIICPSEG----------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSG--------  200 (294)
Q Consensus       164 --~d~Vi~~~~~----------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~--------  200 (294)
                        +|+|||++..                +                 +...+++.+.++||++||..+.....        
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  161 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTS  161 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccc
Confidence              6999998310                0                 11224456778999999976542211        


Q ss_pred             --CchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC-
Q 022625          201 --GIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-  275 (294)
Q Consensus       201 --~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-  275 (294)
                        ....|..+|..  .+.+.....+...++++++|+||.+.+.........+.........++++|+|+++++++.+.. 
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  241 (256)
T PRK09186        162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKGMLDPDDICGTLVFLLSDQSK  241 (256)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHhcCCccCCCCHHHhhhhHhheeccccc
Confidence              11123222211  1112222223347899999999987633211100011111223457899999999999997654 


Q ss_pred             -CCCcEEEEecCC
Q 022625          276 -QTGLIFEVCEIS  287 (294)
Q Consensus       276 -~~g~~~~v~~g~  287 (294)
                       ..|+.+.+.+|.
T Consensus       242 ~~~g~~~~~~~g~  254 (256)
T PRK09186        242 YITGQNIIVDDGF  254 (256)
T ss_pred             cccCceEEecCCc
Confidence             357888887763

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.74  E-value=1e-16  Score=148.53  Aligned_cols=189  Identities=19%  Similarity=0.220  Sum_probs=136.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccc--h-hhhc---CCCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN--A-MESF---GTYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~--~-~~~~---~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      .+.+++||||+||+|++++++|++++  .+|++++..+..  . .+..   +..++.+.+|+.|...+.++++++ .|+|
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh   81 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH   81 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence            56899999999999999999999998  899999887642  1 1112   457899999999999999999999 7776


Q ss_pred             cC-C---c------------------hHHhhhhhcCCCEEEEecccccccCCCC------chhccch---hHHHHHHHHH
Q 022625          170 PS-E---G------------------FISNAGSLKGVQHVILLSQLSVYRGSGG------IQALMKG---NARKLAEQDE  218 (294)
Q Consensus       170 ~~-~---~------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~------~~~~~~~---~~~~~~~~ae  218 (294)
                      ++ .   +                  .+.++|++.|++++||+||..+..+...      ..+|...   .+-..|..+|
T Consensus        82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE  161 (361)
T KOG1430|consen   82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE  161 (361)
T ss_pred             eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence            51 1   1                  1667899999999999999987432111      0111100   1122356788


Q ss_pred             HHHHh-C---CCCEEEEEccceecCCCCCc--------------ceeeccCCCCCCCcCHHHHHHHHHHHhh-----CCC
Q 022625          219 SMLMA-S---GIPYTIIRTGVLQNTPGGKQ--------------GFQFEEGCAANGSLSKEDAAFICVEALE-----SIP  275 (294)
Q Consensus       219 ~~l~~-~---gl~~tivRPg~l~~~~~~~~--------------~~~~~~g~~~~~~Is~eDvA~~iv~aL~-----~~~  275 (294)
                      .++.+ .   ++..+++||..++ ||++..              ....+.+.....+++.+.+|.+.+.+..     .+.
T Consensus       162 ~~Vl~an~~~~l~T~aLR~~~IY-Gpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~  240 (361)
T KOG1430|consen  162 KLVLEANGSDDLYTCALRPPGIY-GPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPS  240 (361)
T ss_pred             HHHHHhcCCCCeeEEEEcccccc-CCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCc
Confidence            88766 2   3889999999999 776322              2334455566778888888888775442     344


Q ss_pred             CCCcEEEEecCCc
Q 022625          276 QTGLIFEVCEISN  288 (294)
Q Consensus       276 ~~g~~~~v~~g~~  288 (294)
                      ..|+.|.+.++..
T Consensus       241 ~~Gq~yfI~d~~p  253 (361)
T KOG1430|consen  241 VNGQFYFITDDTP  253 (361)
T ss_pred             cCceEEEEeCCCc
Confidence            6899999999864

>PRK06182 short chain dehydrogenase; Validated

Probab=99.74  E-value=1.7e-16  Score=142.79  Aligned_cols=186  Identities=11%  Similarity=0.057  Sum_probs=124.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-------CCcEEEEc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICP  170 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi~~  170 (294)
                      .+++++||||+|+||++++++|+++|++|+++.|+++++.+....+++++.+|++|.+++.++++       ++|++||+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~   81 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN   81 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            46899999999999999999999999999999999887665544568999999999999888776       67999998


Q ss_pred             CCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HHHHHH
Q 022625          171 SEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDE  218 (294)
Q Consensus       171 ~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~ae  218 (294)
                      .+.     +                         +...+++.+.++||++||..+..+......|..+|..-  +.+...
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~  161 (273)
T PRK06182         82 AGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALR  161 (273)
T ss_pred             CCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHHHH
Confidence            320     0                         12234566778999999986544333333343333211  112222


Q ss_pred             HHHHhCCCCEEEEEccceecCCCCC--cce-------e-----------eccCCCCCCCcCHHHHHHHHHHHhhCCCCCC
Q 022625          219 SMLMASGIPYTIIRTGVLQNTPGGK--QGF-------Q-----------FEEGCAANGSLSKEDAAFICVEALESIPQTG  278 (294)
Q Consensus       219 ~~l~~~gl~~tivRPg~l~~~~~~~--~~~-------~-----------~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g  278 (294)
                      ..+...|+++++||||.+.......  ...       .           +..........+++|+|+++++++.... ..
T Consensus       162 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~~-~~  240 (273)
T PRK06182        162 LEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTARR-PK  240 (273)
T ss_pred             HHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhCCC-CC
Confidence            2344579999999999886321100  000       0           0000112345689999999999997532 23


Q ss_pred             cEEEEe
Q 022625          279 LIFEVC  284 (294)
Q Consensus       279 ~~~~v~  284 (294)
                      ..|.+.
T Consensus       241 ~~~~~g  246 (273)
T PRK06182        241 TRYAVG  246 (273)
T ss_pred             ceeecC
Confidence            455543

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.74  E-value=1.2e-16  Score=149.72  Aligned_cols=196  Identities=24%  Similarity=0.311  Sum_probs=136.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-C----CcEEeecCCCCH-HHHHHHhcC----C
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-T----YVESMAGDASNK-KFLKTALRG----V  164 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~----~v~~v~~D~~d~-~~l~~~l~~----~  164 (294)
                      .....++|+|+||||.+|+.+++.|+++|+.|++++|+.+++...+. .    ....+..+.... +.+......    .
T Consensus        75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~  154 (411)
T KOG1203|consen   75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGV  154 (411)
T ss_pred             CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccc
Confidence            45566899999999999999999999999999999999988776654 1    333444444333 222333322    2


Q ss_pred             cEEEEcC----Cc---------------hHHhhhhhcCCCEEEEecccccccCCCCchhcc-chhHHHHHHHHHHHHHhC
Q 022625          165 RSIICPS----EG---------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALM-KGNARKLAEQDESMLMAS  224 (294)
Q Consensus       165 d~Vi~~~----~~---------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~-~~~~~~~~~~ae~~l~~~  224 (294)
                      .+++.+.    +.               .+.++|+..|++|||++|+.+........+.+. ......+++.+|++++++
T Consensus       155 ~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~~~S  234 (411)
T KOG1203|consen  155 VIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFLQDS  234 (411)
T ss_pred             eeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHHHhc
Confidence            3444441    11               166789999999999999998876555544443 344566788999999999


Q ss_pred             CCCEEEEEccceecCCCCCccee------eccCCCCCCCcCHHHHHHHHHHHhhCCCCCC-cEEEEecCCccc
Q 022625          225 GIPYTIIRTGVLQNTPGGKQGFQ------FEEGCAANGSLSKEDAAFICVEALESIPQTG-LIFEVCEISNLC  290 (294)
Q Consensus       225 gl~~tivRPg~l~~~~~~~~~~~------~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g-~~~~v~~g~~~~  290 (294)
                      |++|+||||+.+..+.+......      ...+......+++.|+|+.+++++.++...+ ++.+++......
T Consensus       235 gl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~~v~~~~gp  307 (411)
T KOG1203|consen  235 GLPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATFKKVVELVLKPEGP  307 (411)
T ss_pred             CCCcEEEeccccccCCCCcceecccCccccccccccceeeehhhHHHHHHHHHhhhhhccceeEEeecCCCCC
Confidence            99999999998775443222111      1122222347999999999999999988665 666666654443

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=2.4e-16  Score=139.46  Aligned_cols=191  Identities=16%  Similarity=0.144  Sum_probs=126.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~-~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      .+++++||||+|+||++++++|+++|++|++ ..|+.++..+.      .+.++.++.+|++|++++.++++       .
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999877 46776543321      23467889999999998887775       4


Q ss_pred             CcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH-
Q 022625          164 VRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-  212 (294)
Q Consensus       164 ~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~-  212 (294)
                      +|+|||+.+.     +                         +.+.+.+.+.++||++||.....+......|..+|... 
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~  162 (250)
T PRK08063         83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALE  162 (250)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHH
Confidence            6999998321     0                         11123445677999999987665544444554433211 


Q ss_pred             -HHHHHHHHHHhCCCCEEEEEccceecCCCCC----cce--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       213 -~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----~~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                       +.+.....+...++++++|+||++.......    ...  ...........++++|+|++++.++.++.  ..|+.|++
T Consensus       163 ~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~  242 (250)
T PRK08063        163 ALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIV  242 (250)
T ss_pred             HHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEE
Confidence             1122222234478999999999876321110    000  00011122347899999999999997654  35899998


Q ss_pred             ecCCc
Q 022625          284 CEISN  288 (294)
Q Consensus       284 ~~g~~  288 (294)
                      .+|..
T Consensus       243 ~gg~~  247 (250)
T PRK08063        243 DGGRS  247 (250)
T ss_pred             CCCee
Confidence            87754

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.73  E-value=2e-16  Score=141.57  Aligned_cols=179  Identities=25%  Similarity=0.315  Sum_probs=140.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC-----c-
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-----G-  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~-----~-  173 (294)
                      ++|+||||||++|++++++|+++|++|++++|+++++.... .++++..+|+.++..+..++++++.++++..     . 
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~~~~   79 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGSDA   79 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEecccccccc
Confidence            58999999999999999999999999999999999887766 7899999999999999999999999988722     0 


Q ss_pred             h-------HHhhhhhc--CCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecCCCCC-
Q 022625          174 F-------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-  243 (294)
Q Consensus       174 ~-------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-  243 (294)
                      +       +.+.++..  ++++++++|...+.....       ......+...|..+.++|++|+++|+..++.+.... 
T Consensus        80 ~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~~-------~~~~~~~~~~e~~l~~sg~~~t~lr~~~~~~~~~~~~  152 (275)
T COG0702          80 FRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAASP-------SALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGAAF  152 (275)
T ss_pred             hhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCCc-------cHHHHHHHHHHHHHHhcCCCeEEEecCeeeeccchhH
Confidence            1       23344443  488999999887654221       112334678899999999999999977655333211 


Q ss_pred             -------cceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecC
Q 022625          244 -------QGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEI  286 (294)
Q Consensus       244 -------~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g  286 (294)
                             .......+....+.+..+|++.++...+..+...+++|++.++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~  202 (275)
T COG0702         153 IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGP  202 (275)
T ss_pred             HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCC
Confidence                   1112223333678899999999999999998888999999987

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.73  E-value=3.6e-16  Score=138.35  Aligned_cols=190  Identities=14%  Similarity=0.074  Sum_probs=127.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-----CCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+.+......     +..++++.+|++|.++++++++       .+
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999999876543221     2357889999999998887765       57


Q ss_pred             cEEEEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--
Q 022625          165 RSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--  212 (294)
Q Consensus       165 d~Vi~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--  212 (294)
                      |+|||+.+.             +                 +..++++.+.++||++||.....+......|..++...  
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~  162 (252)
T PRK06138         83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIAS  162 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHH
Confidence            999998221             0                 11234456778999999987655444444554444321  


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCCCc------ce---eeccCCCC-CCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ------GF---QFEEGCAA-NGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~------~~---~~~~g~~~-~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      +.+.....+...+++++++|||.+........      ..   ........ ..+++++|+|+++++++.++.  ..|..
T Consensus       163 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~  242 (252)
T PRK06138        163 LTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATGTT  242 (252)
T ss_pred             HHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCE
Confidence            11122222344689999999998863211100      00   00011112 237899999999999998764  35778


Q ss_pred             EEEecC
Q 022625          281 FEVCEI  286 (294)
Q Consensus       281 ~~v~~g  286 (294)
                      +.+.+|
T Consensus       243 ~~~~~g  248 (252)
T PRK06138        243 LVVDGG  248 (252)
T ss_pred             EEECCC
Confidence            888665

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.73  E-value=1.4e-16  Score=145.72  Aligned_cols=187  Identities=14%  Similarity=0.082  Sum_probs=122.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc----CCcEEEEcCCc---
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPSEG---  173 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~----~~d~Vi~~~~~---  173 (294)
                      ||||||+|+||++++++|+++|+ +|+++.|...... ........+..|+.+.+.++.+.+    ++|+|||+++.   
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~   79 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK-FLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDT   79 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh-hhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccCc
Confidence            69999999999999999999998 7887776543211 111112456778888877776654    78999998320   


Q ss_pred             -----------------hHHhhhhhcCCCEEEEecccccccCCCC-chh----ccch-hHHHHHHHHHHHHHh------C
Q 022625          174 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGG-IQA----LMKG-NARKLAEQDESMLMA------S  224 (294)
Q Consensus       174 -----------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~-~~~----~~~~-~~~~~~~~ae~~l~~------~  224 (294)
                                       .+.+++.+.++ +||++||..+|..... ...    ..+. .+-..|..+|.++++      .
T Consensus        80 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~  158 (314)
T TIGR02197        80 TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEAL  158 (314)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhcc
Confidence                             03455667776 7999999887753211 000    0011 111234456665543      3


Q ss_pred             CCCEEEEEccceecCCCCCc-------------------cee-------eccCCCCCCCcCHHHHHHHHHHHhhCCCCCC
Q 022625          225 GIPYTIIRTGVLQNTPGGKQ-------------------GFQ-------FEEGCAANGSLSKEDAAFICVEALESIPQTG  278 (294)
Q Consensus       225 gl~~tivRPg~l~~~~~~~~-------------------~~~-------~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g  278 (294)
                      +++++++||+.++ +++...                   ...       ++.|.+..+++|++|++++++.++..  ..+
T Consensus       159 ~~~~~~lR~~~vy-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~--~~~  235 (314)
T TIGR02197       159 SAQVVGLRYFNVY-GPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN--GVS  235 (314)
T ss_pred             CCceEEEEEeecc-CCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc--ccC
Confidence            5799999999988 443110                   011       12345557899999999999999987  346


Q ss_pred             cEEEEecC-Ccccccc
Q 022625          279 LIFEVCEI-SNLCEQL  293 (294)
Q Consensus       279 ~~~~v~~g-~~~~~ei  293 (294)
                      .+||++++ ..+++|+
T Consensus       236 ~~yni~~~~~~s~~e~  251 (314)
T TIGR02197       236 GIFNLGTGRARSFNDL  251 (314)
T ss_pred             ceEEcCCCCCccHHHH
Confidence            79999987 4455543

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.4e-16  Score=142.20  Aligned_cols=188  Identities=16%  Similarity=0.139  Sum_probs=123.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--------CCCcEEeecCCCCHHHHHHHh-------c
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTAL-------R  162 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~l-------~  162 (294)
                      .+++++||||+|+||+.++++|+++|++|++++|+++...+..        ...++++.+|++|.+++++ +       .
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            4688999999999999999999999999999999876543221        2368889999999988765 3       3


Q ss_pred             CCcEEEEcCCc----h--------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          163 GVRSIICPSEG----F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       163 ~~d~Vi~~~~~----~--------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      .+|+|||+++.    .                          +.+.+++.+.++||++||.....+..+...|..++.. 
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~  160 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYAL  160 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHH
Confidence            46999998221    0                          1112455677899999998665555455555443321 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCC-c-c--eeec---------------cCCCCCCCcCHHHHHHHHHHHh
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-Q-G--FQFE---------------EGCAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-~-~--~~~~---------------~g~~~~~~Is~eDvA~~iv~aL  271 (294)
                       .+.+.....+...+++++++|||.+....... . .  ....               .......+++++|+|++++.++
T Consensus       161 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~  240 (280)
T PRK06914        161 EGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEIA  240 (280)
T ss_pred             HHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHH
Confidence             11122222234469999999999876321110 0 0  0000               0011234679999999999999


Q ss_pred             hCCCCCCcEEEEecCC
Q 022625          272 ESIPQTGLIFEVCEIS  287 (294)
Q Consensus       272 ~~~~~~g~~~~v~~g~  287 (294)
                      +++... ..|++.++.
T Consensus       241 ~~~~~~-~~~~~~~~~  255 (280)
T PRK06914        241 ESKRPK-LRYPIGKGV  255 (280)
T ss_pred             cCCCCC-cccccCCch
Confidence            886543 568876543

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.72  E-value=3.7e-16  Score=140.95  Aligned_cols=188  Identities=13%  Similarity=0.087  Sum_probs=123.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      ..+|+++||||+|+||++++++|+++|++|++++|+.+...+.      .+.+++++.+|++|.+++.++++       .
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4568999999999999999999999999999999987654322      12357788999999998887765       4


Q ss_pred             CcEEEEcCCc-------------h-------------HH----hhhhhcCCCEEEEecccccccCCCCchhccchhHHH-
Q 022625          164 VRSIICPSEG-------------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-  212 (294)
Q Consensus       164 ~d~Vi~~~~~-------------~-------------~~----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~-  212 (294)
                      +|++||+++.             +             +.    ..+.+.+..+||++||...+.+......|..+|... 
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  167 (274)
T PRK07775         88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLE  167 (274)
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHHH
Confidence            6999998321             0             11    112334567899999987776554444454433211 


Q ss_pred             -HHHHHHHHHHhCCCCEEEEEccceecCCCCCc--c-e-------eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEE
Q 022625          213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--G-F-------QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIF  281 (294)
Q Consensus       213 -~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~--~-~-------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~  281 (294)
                       +.+.....+...|+++++||||.+..+.+...  . .       ..........+++++|+|++++.+++.+. .+.+|
T Consensus       168 ~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~-~~~~~  246 (274)
T PRK07775        168 AMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETPR-GAHVV  246 (274)
T ss_pred             HHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCCC-CCCee
Confidence             11111112233589999999998753322110  0 0       00012223558999999999999998753 35677


Q ss_pred             EEec
Q 022625          282 EVCE  285 (294)
Q Consensus       282 ~v~~  285 (294)
                      ++.=
T Consensus       247 ~~~~  250 (274)
T PRK07775        247 NMEV  250 (274)
T ss_pred             EEee
Confidence            7653

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.72  E-value=3.3e-16  Score=139.38  Aligned_cols=192  Identities=14%  Similarity=0.153  Sum_probs=129.0

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhcC------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALRG------  163 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~~------  163 (294)
                      ...+|+++||||+|+||++++++|+++|++|+++.|++++..+..      +..+.++.+|++|.++++++++.      
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            356899999999999999999999999999999999876543321      22477889999999988887753      


Q ss_pred             -CcEEEEcCCc-----h---------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          164 -VRSIICPSEG-----F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       164 -~d~Vi~~~~~-----~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                       .|++||+.+.     +                     +.+    .+.+.+.++||++||.....+......|..+|.. 
T Consensus        87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~  166 (255)
T PRK07523         87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAV  166 (255)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHH
Confidence             6999998321     0                     111    2234467899999998766554444455444321 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCC----cce--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEE
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE  282 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----~~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~  282 (294)
                       .+.+.....+...|+++++||||.+.......    ...  .+........+..++|+|.++++++.+..  ..|+.++
T Consensus       167 ~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~  246 (255)
T PRK07523        167 GNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNGHVLY  246 (255)
T ss_pred             HHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEE
Confidence             12222223334579999999999876321110    000  01111222346679999999999987643  3689999


Q ss_pred             EecCC
Q 022625          283 VCEIS  287 (294)
Q Consensus       283 v~~g~  287 (294)
                      +.+|.
T Consensus       247 ~~gg~  251 (255)
T PRK07523        247 VDGGI  251 (255)
T ss_pred             ECCCe
Confidence            98774

>PRK12320 hypothetical protein; Provisional

Probab=99.72  E-value=2.4e-16  Score=157.63  Aligned_cols=167  Identities=17%  Similarity=0.186  Sum_probs=122.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC----c--
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE----G--  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~----~--  173 (294)
                      |+||||||+||||++++++|+++|++|++++|.+...   ...+++++.+|++|.. +.+++.++|+|||+..    .  
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~~~~   76 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTSAPG   76 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCccchh
Confidence            5899999999999999999999999999999876432   2246889999999984 7888899999999832    0  


Q ss_pred             --------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc
Q 022625          174 --------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG  245 (294)
Q Consensus       174 --------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~  245 (294)
                              .+.++|++.|+ ++||+||....  ..   .+         ..+|.++...+++++++|++.++ |+.....
T Consensus        77 ~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~G~--~~---~~---------~~aE~ll~~~~~p~~ILR~~nVY-Gp~~~~~  140 (699)
T PRK12320         77 GVGITGLAHVANAAARAGA-RLLFVSQAAGR--PE---LY---------RQAETLVSTGWAPSLVIRIAPPV-GRQLDWM  140 (699)
T ss_pred             hHHHHHHHHHHHHHHHcCC-eEEEEECCCCC--Cc---cc---------cHHHHHHHhcCCCEEEEeCceec-CCCCccc
Confidence                    15667888887 79999986321  10   11         14677777788999999999998 5532211


Q ss_pred             ----e-eec---cCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCc
Q 022625          246 ----F-QFE---EGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISN  288 (294)
Q Consensus       246 ----~-~~~---~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~  288 (294)
                          + .+.   ...+....||++|++++++.+++.+.  +.+||+++++.
T Consensus       141 ~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~~--~GiyNIG~~~~  189 (699)
T PRK12320        141 VCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDR--NGVVDLATPDT  189 (699)
T ss_pred             HhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCCC--CCEEEEeCCCe
Confidence                0 000   11223334699999999999987632  34999999843

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.4e-16  Score=143.67  Aligned_cols=187  Identities=12%  Similarity=0.106  Sum_probs=125.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI  167 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~V  167 (294)
                      .+|+|+||||+|+||++++++|+++|++|++++|+++++.+.   .+..+..+.+|++|.+++.++++       .+|+|
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            368999999999999999999999999999999998765432   23467888999999988877654       46999


Q ss_pred             EEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HHH
Q 022625          168 ICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAE  215 (294)
Q Consensus       168 i~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~  215 (294)
                      ||+.+.             +                 +...+++.+.+++|++||..+..+......|..+|...  +.+
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~  161 (275)
T PRK08263         82 VNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSE  161 (275)
T ss_pred             EECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHH
Confidence            998321             0                 11123456778999999988776655555554444321  122


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCCC-Cc----ce--------eeccCCCCCCC-cCHHHHHHHHHHHhhCCCCCCcEE
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPGG-KQ----GF--------QFEEGCAANGS-LSKEDAAFICVEALESIPQTGLIF  281 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~~-~~----~~--------~~~~g~~~~~~-Is~eDvA~~iv~aL~~~~~~g~~~  281 (294)
                      .....+...|+++++||||.+...... ..    ..        .+........+ ++++|+|++++.+++.+...++.|
T Consensus       162 ~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~~~~~~~~  241 (275)
T PRK08263        162 ALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAENPPLRLF  241 (275)
T ss_pred             HHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCCCCCeEEE
Confidence            222334457999999999987532110 00    00        00011122334 889999999999998876666655


Q ss_pred             EEe
Q 022625          282 EVC  284 (294)
Q Consensus       282 ~v~  284 (294)
                      +..
T Consensus       242 ~~~  244 (275)
T PRK08263        242 LGS  244 (275)
T ss_pred             eCc
Confidence            443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.72  E-value=3.9e-16  Score=140.56  Aligned_cols=188  Identities=11%  Similarity=0.127  Sum_probs=124.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcEEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSII  168 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi  168 (294)
                      .|+++||||+|+||++++++|+++|++|+++.|+++.....   .+.++.++.+|++|.+++.++++       ++|+||
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            47899999999999999999999999999999998665432   23468899999999988877664       469999


Q ss_pred             EcCCc-------------h-------------HHhh----hhhcCCCEEEEecccccccCCCCchhccchhHHH--HHHH
Q 022625          169 CPSEG-------------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQ  216 (294)
Q Consensus       169 ~~~~~-------------~-------------~~~~----~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~  216 (294)
                      |+++.             +             +.++    +++.+.++||++||..+..+......|..+|...  +.+.
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~  161 (276)
T PRK06482         82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEA  161 (276)
T ss_pred             ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHH
Confidence            98221             0             1222    3556778999999987654444444554443311  1112


Q ss_pred             HHHHHHhCCCCEEEEEccceecCCCC--Cc--ceeec------------cCCCCCCCcCHHHHHHHHHHHhhCCCCCCcE
Q 022625          217 DESMLMASGIPYTIIRTGVLQNTPGG--KQ--GFQFE------------EGCAANGSLSKEDAAFICVEALESIPQTGLI  280 (294)
Q Consensus       217 ae~~l~~~gl~~tivRPg~l~~~~~~--~~--~~~~~------------~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~  280 (294)
                      ....+...|++++++|||.+....+.  ..  .....            .........+++|++++++.++..+.. +..
T Consensus       162 l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~~~~-~~~  240 (276)
T PRK06482        162 VAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQTPA-PRR  240 (276)
T ss_pred             HHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcCCCC-CeE
Confidence            22223346999999999986422111  00  00000            000111235899999999999876533 567


Q ss_pred             EEEecCC
Q 022625          281 FEVCEIS  287 (294)
Q Consensus       281 ~~v~~g~  287 (294)
                      |++.+++
T Consensus       241 ~~~g~~~  247 (276)
T PRK06482        241 LTLGSDA  247 (276)
T ss_pred             EecChHH
Confidence            9988874

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.72  E-value=2.9e-16  Score=138.82  Aligned_cols=190  Identities=13%  Similarity=0.133  Sum_probs=128.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      .+++++||||+|+||++++++|+++|++|+++.|+.++..+.      .+..++++.+|++|.++++++++       .+
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999999987654332      12368899999999988887765       57


Q ss_pred             cEEEEcCC-----ch-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--H
Q 022625          165 RSIICPSE-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K  212 (294)
Q Consensus       165 d~Vi~~~~-----~~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~  212 (294)
                      |++||+.+     .+                         +.+.+.+.+.++||++||..++.+......|..++..  .
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~  161 (250)
T TIGR03206        82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVA  161 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHHH
Confidence            99999832     10                         1122335667899999998877655544455444321  1


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCC------Ccc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGG------KQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~------~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      +.+.....+...+++++++|||.+.+....      ...    ..+..........+++|+|+++..++..+.  ..|++
T Consensus       162 ~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~  241 (250)
T TIGR03206       162 FSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQV  241 (250)
T ss_pred             HHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcCcE
Confidence            222222223346899999999987632110      000    001111222345689999999999887653  36899


Q ss_pred             EEEecCC
Q 022625          281 FEVCEIS  287 (294)
Q Consensus       281 ~~v~~g~  287 (294)
                      +.+.+|.
T Consensus       242 ~~~~~g~  248 (250)
T TIGR03206       242 LSVSGGL  248 (250)
T ss_pred             EEeCCCc
Confidence            9997763

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.72  E-value=7.1e-16  Score=135.81  Aligned_cols=175  Identities=17%  Similarity=0.174  Sum_probs=122.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      ..+++++||||+|+||+.++++|+++|++|++++|++++..+.      .+.++.++.+|+++.+++.++++       +
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3468999999999999999999999999999999987654322      12367889999999998888775       6


Q ss_pred             CcEEEEcCCc-----h---------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          164 VRSIICPSEG-----F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       164 ~d~Vi~~~~~-----~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      +|+|||+.+.     +                     +..    .+.+.+.+++|++||.....+......|..++..  
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~  164 (239)
T PRK07666         85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVL  164 (239)
T ss_pred             ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHH
Confidence            7999998221     0                     111    2234567899999998776555544455444431  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      .+.+.....+...|+++++||||.+..........   ........++++|+|+++++++..+
T Consensus       165 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        165 GLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGL---TDGNPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCcccCcchhhccc---cccCCCCCCCHHHHHHHHHHHHhCC
Confidence            12222333345579999999999987443221111   1122345689999999999999875

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.72  E-value=6.7e-16  Score=139.39  Aligned_cols=179  Identities=12%  Similarity=0.114  Sum_probs=120.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---CCCcEEeecCCCCHHHHHHHhc-------CCcEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALR-------GVRSI  167 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~l~-------~~d~V  167 (294)
                      .+++++||||+|+||++++++|+++|++|++++|++++.....   +..+.++.+|++|.+++.++++       ++|+|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3688999999999999999999999999999999987654332   2367889999999988877765       47999


Q ss_pred             EEcCCc-------------h-------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHH
Q 022625          168 ICPSEG-------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE  215 (294)
Q Consensus       168 i~~~~~-------------~-------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~  215 (294)
                      ||+.+.             +             +.+    .+++.+.++||++||..+..+..+...|..+|..  .+.+
T Consensus        83 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~  162 (277)
T PRK06180         83 VNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISE  162 (277)
T ss_pred             EECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHHHH
Confidence            998221             0             111    1334566799999998776655555555444331  1112


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCCCC-c---ceeec-------------cCCCCCCCcCHHHHHHHHHHHhhCCCC
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPGGK-Q---GFQFE-------------EGCAANGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~~~-~---~~~~~-------------~g~~~~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      .....+...|+++++||||.+....... .   .....             .......+.+++|+|++++.+++.+..
T Consensus       163 ~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~~  240 (277)
T PRK06180        163 SLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESDEP  240 (277)
T ss_pred             HHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCCCC
Confidence            2222234469999999999875321100 0   00000             011223457899999999999987544

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.71  E-value=3.8e-16  Score=139.20  Aligned_cols=192  Identities=17%  Similarity=0.134  Sum_probs=126.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---C-CCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G-TYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~-~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      .+++++++||||+|+||+.++++|+++|++|+++.|+.+...+..   + ..++++.+|++|++++.++++       ++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            356799999999999999999999999999999999876543321   1 146889999999988877664       67


Q ss_pred             cEEEEcCCch---------------------------HHh----hhhhcCC-CEEEEecccccccCCCCchhccchhHH-
Q 022625          165 RSIICPSEGF---------------------------ISN----AGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       165 d~Vi~~~~~~---------------------------~~~----~~~~~gv-~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      |+|||+.+..                           +.+    .+...+. ++|+++||.....+......|...+.. 
T Consensus        88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~  167 (264)
T PRK12829         88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAV  167 (264)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHH
Confidence            9999983210                           111    1233444 678888887654443333344333321 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc---------e---e----eccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---------F---Q----FEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~---------~---~----~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                       .+.+.....+...+++++++|||++. ++.....         .   .    .........+++++|+|+++..++...
T Consensus       168 ~~~~~~l~~~~~~~~i~~~~l~pg~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~  246 (264)
T PRK12829        168 VGLVKSLAIELGPLGIRVNAILPGIVR-GPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPA  246 (264)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEecCCcC-ChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence             11122222234468999999999986 2221000         0   0    001112235799999999999988643


Q ss_pred             --CCCCcEEEEecCCc
Q 022625          275 --PQTGLIFEVCEISN  288 (294)
Q Consensus       275 --~~~g~~~~v~~g~~  288 (294)
                        ...++.|++.+|..
T Consensus       247 ~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        247 ARYITGQAISVDGNVE  262 (264)
T ss_pred             ccCccCcEEEeCCCcc
Confidence              34689999999865

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.71  E-value=9.1e-16  Score=134.72  Aligned_cols=188  Identities=19%  Similarity=0.185  Sum_probs=125.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---C--CCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G--TYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~--~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      ..+++++||||+|+||+.++++|+++|++|++++|++++..+..   .  ..++++.+|++|.+++.++++       ++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            34689999999999999999999999999999999886643321   1  468889999999988877665       67


Q ss_pred             cEEEEcCCc-------------h-------------HHhhhh---hcCCCEEEEecccccccCCCCchhccchhH--HHH
Q 022625          165 RSIICPSEG-------------F-------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL  213 (294)
Q Consensus       165 d~Vi~~~~~-------------~-------------~~~~~~---~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~  213 (294)
                      |+|||+.+.             +             +.+++.   +.+.++||++||.....+......|..++.  ..+
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~  163 (237)
T PRK07326         84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGF  163 (237)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHHHHHH
Confidence            999998321             0             111111   235578999999876554444444433332  111


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcEEEEecCCcc
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVCEISNL  289 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~~~v~~g~~~  289 (294)
                      .+.....+...|+++++||||.+.+......     ........++.+|+|+.+++++..+. .....+.+..+.++
T Consensus       164 ~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-----~~~~~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~~~~~~~~  235 (237)
T PRK07326        164 SEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-----PSEKDAWKIQPEDIAQLVLDLLKMPPRTLPSKIEVRPSRPP  235 (237)
T ss_pred             HHHHHHHhcccCcEEEEEeeccccCcccccc-----cchhhhccCCHHHHHHHHHHHHhCCccccccceEEecCCCC
Confidence            2222223445799999999999863322111     01111224899999999999998775 44566666655544

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.71  E-value=6.1e-16  Score=136.41  Aligned_cols=176  Identities=14%  Similarity=0.099  Sum_probs=120.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      .+|+++||||+|+||+.++++|+++|++|++++|++++..+..      +.++.++.+|++|.+++.++++       .+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999886543321      2368889999999988877665       47


Q ss_pred             cEEEEcCCch------------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--
Q 022625          165 RSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--  212 (294)
Q Consensus       165 d~Vi~~~~~~------------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--  212 (294)
                      |++||+.+..                              +.+.+.+.+..+||++||...+.+......|..+|...  
T Consensus        85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~  164 (241)
T PRK07454         85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAA  164 (241)
T ss_pred             CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHHH
Confidence            9999983210                              11223445568999999988776555555554443211  


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      +.+.....+...|+++++||||.+.........  ..........++++|+|+++++++.++.
T Consensus       165 ~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~--~~~~~~~~~~~~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        165 FTKCLAEEERSHGIRVCTITLGAVNTPLWDTET--VQADFDRSAMLSPEQVAQTILHLAQLPP  225 (241)
T ss_pred             HHHHHHHHhhhhCCEEEEEecCcccCCcccccc--cccccccccCCCHHHHHHHHHHHHcCCc
Confidence            112222233457999999999997632211111  1111122346899999999999998764

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.71  E-value=9.1e-16  Score=135.50  Aligned_cols=191  Identities=16%  Similarity=0.120  Sum_probs=128.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|++++.....      ..+++++.+|++|.+++.++++       +
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            45799999999999999999999999999999999877543321      2358889999999998887764       5


Q ss_pred             CcEEEEcCCc-------------h-------------HHhh----hhhcCCCEEEEecccccccCCCCchhccchhHHH-
Q 022625          164 VRSIICPSEG-------------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-  212 (294)
Q Consensus       164 ~d~Vi~~~~~-------------~-------------~~~~----~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~-  212 (294)
                      +|+|||+.+.             +             +.+.    +.+.+..+||++||.....+......|..++... 
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~  164 (250)
T PRK12939         85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVI  164 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHH
Confidence            7999998321             0             1111    2334456999999987665544444454433211 


Q ss_pred             -HHHHHHHHHHhCCCCEEEEEccceecCCCCC-c----ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-Q----GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       213 -~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-~----~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                       +.+.....+...+++++.|+||.+....... .    ...+........+++++|+|++++.++..+.  ..|+.+.+.
T Consensus       165 ~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~  244 (250)
T PRK12939        165 GMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVN  244 (250)
T ss_pred             HHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence             1122222234478999999999875221110 0    0011122334557899999999999997653  478999988


Q ss_pred             cCC
Q 022625          285 EIS  287 (294)
Q Consensus       285 ~g~  287 (294)
                      +|.
T Consensus       245 gg~  247 (250)
T PRK12939        245 GGF  247 (250)
T ss_pred             CCc
Confidence            764

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.71  E-value=5.1e-16  Score=138.32  Aligned_cols=191  Identities=14%  Similarity=0.117  Sum_probs=128.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      +.+++++||||+|+||++++++|+++|++|+++.|+.++....   ....++++.+|++|.++++++++       .+|+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4568999999999999999999999999999999998764432   23468889999999988877765       4699


Q ss_pred             EEEcCCc-------------h-------------HHhhh----hhcC-CCEEEEecccccccCCCCchhccchhHH--HH
Q 022625          167 IICPSEG-------------F-------------ISNAG----SLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--KL  213 (294)
Q Consensus       167 Vi~~~~~-------------~-------------~~~~~----~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~  213 (294)
                      +||+.+.             +             +.+++    .+.+ -.+||++||.....+..+...|..+|..  .+
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  163 (257)
T PRK07067         84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISY  163 (257)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHHH
Confidence            9997221             0             11112    1222 2589999997655444444455444331  12


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCCc---------------ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--C
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQ---------------GFQFEEGCAANGSLSKEDAAFICVEALESIP--Q  276 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~---------------~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~  276 (294)
                      .+.....+...|+++++|+||.+........               ...+..+.....+.+++|+|+++++++..+.  .
T Consensus       164 ~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  243 (257)
T PRK07067        164 TQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADYI  243 (257)
T ss_pred             HHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccc
Confidence            2222233345799999999998763211100               0011123334567899999999999997654  4


Q ss_pred             CCcEEEEecCC
Q 022625          277 TGLIFEVCEIS  287 (294)
Q Consensus       277 ~g~~~~v~~g~  287 (294)
                      .|++|++.+|.
T Consensus       244 ~g~~~~v~gg~  254 (257)
T PRK07067        244 VAQTYNVDGGN  254 (257)
T ss_pred             cCcEEeecCCE
Confidence            68999998774

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.71  E-value=5.4e-16  Score=136.70  Aligned_cols=191  Identities=16%  Similarity=0.121  Sum_probs=128.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHHhc---CCcEEEEcC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR---GVRSIICPS  171 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l~---~~d~Vi~~~  171 (294)
                      ...+++++||||+|+||+.+++.|+++|++|+++.|+.++..+... .+.+++.+|++|.+.+.++++   .+|+|||+.
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~a   85 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCA   85 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECC
Confidence            3567899999999999999999999999999999998876544322 246788999999988888776   479999983


Q ss_pred             Cc-------------h-------------HHhh----hhhcC-CCEEEEecccccccCCCCchhccchhHHH--HHHHHH
Q 022625          172 EG-------------F-------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDE  218 (294)
Q Consensus       172 ~~-------------~-------------~~~~----~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~ae  218 (294)
                      +.             +             +.++    +.+.+ .++||++||...+.+......|..+|...  +.+...
T Consensus        86 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~a  165 (245)
T PRK07060         86 GIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLC  165 (245)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHHH
Confidence            21             0             1111    22222 47999999987766555555554444311  111122


Q ss_pred             HHHHhCCCCEEEEEccceecCCCCCc--c----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          219 SMLMASGIPYTIIRTGVLQNTPGGKQ--G----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       219 ~~l~~~gl~~tivRPg~l~~~~~~~~--~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      ..+...+++++.+|||.+........  .    ..+........+++.+|+|++++.++..+.  ..|+.+++.+|
T Consensus       166 ~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK07060        166 VELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGG  241 (245)
T ss_pred             HHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCcEEeECCC
Confidence            22334689999999998763221100  0    001111223557899999999999997654  45899988765

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.71  E-value=8e-16  Score=136.09  Aligned_cols=188  Identities=13%  Similarity=0.140  Sum_probs=123.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhh------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~------~~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+++++||||+|+||++++++|+++|++|+++.|+.++ ...      ..+..+.++.+|++|.+.+.++++       
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999999999997643 111      112357889999999998877665       


Q ss_pred             CCcEEEEcCCc--------------------hHHhhhhhc--CCCEEEEecccccc-cCC----CCchhccchhHHHHHH
Q 022625          163 GVRSIICPSEG--------------------FISNAGSLK--GVQHVILLSQLSVY-RGS----GGIQALMKGNARKLAE  215 (294)
Q Consensus       163 ~~d~Vi~~~~~--------------------~~~~~~~~~--gv~r~V~vSs~~~~-~~~----~~~~~~~~~~~~~~~~  215 (294)
                      ++|+|||+.+.                    .+.+.+...  ...+||++||..+. .+.    .....|..+     |.
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~s-----K~  158 (248)
T PRK07806         84 GLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARS-----KR  158 (248)
T ss_pred             CCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHH-----HH
Confidence            57999998321                    022333321  23589999986542 111    111223222     22


Q ss_pred             HHHHHH-------HhCCCCEEEEEccceecCCCCCc----ce--ee-ccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEE
Q 022625          216 QDESML-------MASGIPYTIIRTGVLQNTPGGKQ----GF--QF-EEGCAANGSLSKEDAAFICVEALESIPQTGLIF  281 (294)
Q Consensus       216 ~ae~~l-------~~~gl~~tivRPg~l~~~~~~~~----~~--~~-~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~  281 (294)
                      ..|.++       ...++++++|+|+.+.. +....    ..  .. ........+++++|+|++++.+++.+...|++|
T Consensus       159 a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~g~~~  237 (248)
T PRK07806        159 AGEDALRALRPELAEKGIGFVVVSGDMIEG-TVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVTAPVPSGHIE  237 (248)
T ss_pred             HHHHHHHHHHHHhhccCeEEEEeCCccccC-chhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhhccccCccEE
Confidence            333333       23689999999987652 21100    00  00 000112367899999999999998766789999


Q ss_pred             EEecCCccc
Q 022625          282 EVCEISNLC  290 (294)
Q Consensus       282 ~v~~g~~~~  290 (294)
                      ++.+++...
T Consensus       238 ~i~~~~~~~  246 (248)
T PRK07806        238 YVGGADYFL  246 (248)
T ss_pred             EecCcccee
Confidence            999987654

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.70  E-value=5.4e-16  Score=135.22  Aligned_cols=182  Identities=15%  Similarity=0.131  Sum_probs=127.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---C-CCcEEeecCCCCHHHHHHHh-------cCCc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G-TYVESMAGDASNKKFLKTAL-------RGVR  165 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~-~~v~~v~~D~~d~~~l~~~l-------~~~d  165 (294)
                      ..+|.++||||+++||.++++.|++.|++|++..|..++++++.   + ..+..+..|++|.+++++++       ..+|
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence            35689999999999999999999999999999999999876653   2 25788999999998865554       3569


Q ss_pred             EEEEcCC----ch--------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHH
Q 022625          166 SIICPSE----GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL  213 (294)
Q Consensus       166 ~Vi~~~~----~~--------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~  213 (294)
                      ++||+++    +.                          +...+.+.+-.+||++||.++..+..+...|...|+  +.+
T Consensus        84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~f  163 (246)
T COG4221          84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAF  163 (246)
T ss_pred             EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHH
Confidence            9999832    10                          122355556669999999987665555555544443  122


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCC-----CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCC
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPG-----GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTG  278 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~-----~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g  278 (294)
                      .+..+..+...++++|.|.||.+.+...     .+.......-......++.+|+|+.+.++++.|.+.+
T Consensus       164 s~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~vn  233 (246)
T COG4221         164 SLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQHVN  233 (246)
T ss_pred             HHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCccc
Confidence            2333444455899999999999853211     1000111111134567899999999999999997543

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.70  E-value=1.3e-15  Score=133.91  Aligned_cols=191  Identities=14%  Similarity=0.120  Sum_probs=124.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch-hh------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-ME------SFGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~-~~------~~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+++++||||+|+||+++++.|+++|++|+++.|+..+. ..      .....+.++.+|++|.+++.++++       
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3568999999999999999999999999998888876531 11      122467888999999988877665       


Q ss_pred             CCcEEEEcCCc-------------h-------------HH----hhhhhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          163 GVRSIICPSEG-------------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       163 ~~d~Vi~~~~~-------------~-------------~~----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      .+|+|||+.+.             +             +.    +.+.+.+.++||++||.....+......|..++.. 
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~  162 (248)
T PRK05557         83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGV  162 (248)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHH
Confidence            57999998321             0             11    12334567799999998655444344444333321 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhC--CCCCCcEEEEe
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALES--IPQTGLIFEVC  284 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~--~~~~g~~~~v~  284 (294)
                       .+.+.....+...+++++++|||.+.........    ..+........+.+++|+|.++..++..  ....|+.|++.
T Consensus       163 ~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~  242 (248)
T PRK05557        163 IGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQTLHVN  242 (248)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccccEEEec
Confidence             1122222333457899999999987532211100    0111122234467999999999988765  33568999998


Q ss_pred             cCC
Q 022625          285 EIS  287 (294)
Q Consensus       285 ~g~  287 (294)
                      +|-
T Consensus       243 ~~~  245 (248)
T PRK05557        243 GGM  245 (248)
T ss_pred             CCc
Confidence            763

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.2e-15  Score=135.47  Aligned_cols=190  Identities=18%  Similarity=0.103  Sum_probs=124.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~-~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+++++||||+|+||++++++|+++|++|+++ .|+.++..+.      .+..++++.+|++|.+++.++++       
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            456899999999999999999999999999875 5766543221      12357889999999998877765       


Q ss_pred             ------CCcEEEEcCCc----h----------------------HHhhhhh--cCCCEEEEecccccccCCCCchhccch
Q 022625          163 ------GVRSIICPSEG----F----------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       163 ------~~d~Vi~~~~~----~----------------------~~~~~~~--~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                            ++|++||+.+.    .                      +.+.+..  .+.++||++||..++.+..+...|..+
T Consensus        84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y~~s  163 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLS  163 (254)
T ss_pred             cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcchHhh
Confidence                  47999998321    0                      1111111  123589999998877655555556444


Q ss_pred             hHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCC----cc-eeec-cCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QG-FQFE-EGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       209 ~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----~~-~~~~-~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      |...  +.+.....+...++++++++||.+.......    .. ..+. ........++++|+|+++..++.++.  ..|
T Consensus       164 K~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g  243 (254)
T PRK12746        164 KGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRWVTG  243 (254)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCcCC
Confidence            4321  1122222233478999999999876322110    00 0011 11122445689999999998887653  368


Q ss_pred             cEEEEecC
Q 022625          279 LIFEVCEI  286 (294)
Q Consensus       279 ~~~~v~~g  286 (294)
                      ++|++.++
T Consensus       244 ~~~~i~~~  251 (254)
T PRK12746        244 QIIDVSGG  251 (254)
T ss_pred             CEEEeCCC
Confidence            89999766

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.6e-15  Score=133.66  Aligned_cols=191  Identities=15%  Similarity=0.155  Sum_probs=124.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc----chhhh------cCCCcEEeecCCCCHHHHHHHhc----
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----NAMES------FGTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~----~~~~~------~~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|...    .....      .+..++++.+|++|.++++++++    
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999776432    21111      12367899999999988877763    


Q ss_pred             ---CCcEEEEcCCc-----h---------------------HHhhhh-----hcCCCEEEEecccccccCCCCchhccch
Q 022625          163 ---GVRSIICPSEG-----F---------------------ISNAGS-----LKGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       163 ---~~d~Vi~~~~~-----~---------------------~~~~~~-----~~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                         ++|+|||+.+.     +                     +.+++.     +.+.++||++||...+.+......|..+
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s  163 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAAS  163 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHH
Confidence               57999998321     0                     222233     4567899999998876555444455444


Q ss_pred             hHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce-ee-ccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEE
Q 022625          209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF-QF-EEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE  282 (294)
Q Consensus       209 ~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~-~~-~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~  282 (294)
                      +..  .+.+.....+...+++++++|||.+.......... .. ..........+++|+|++++.++.+..  ..|+.++
T Consensus       164 K~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~  243 (249)
T PRK12827        164 KAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALVAFLVSDAASYVTGQVIP  243 (249)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcCHHHHHHHHHHHcCcccCCccCcEEE
Confidence            331  11122222234468999999999987432111110 00 011111234589999999999886543  3578999


Q ss_pred             EecCC
Q 022625          283 VCEIS  287 (294)
Q Consensus       283 v~~g~  287 (294)
                      +.+|.
T Consensus       244 ~~~g~  248 (249)
T PRK12827        244 VDGGF  248 (249)
T ss_pred             eCCCC
Confidence            87663

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.70  E-value=3.6e-16  Score=138.92  Aligned_cols=178  Identities=15%  Similarity=0.067  Sum_probs=120.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-CCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-GVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-~~d~Vi~~~  171 (294)
                      +++++||||+|+||++++++|+++|++|++++|++.+..+.      ....+.++.+|++|.+++.+++. ++|+|||+.
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            57899999999999999999999999999999987654322      22358889999999999998887 789999973


Q ss_pred             Cc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HHHHHHH
Q 022625          172 EG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDES  219 (294)
Q Consensus       172 ~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~ae~  219 (294)
                      +.             +                 +...+.+.+.++||++||..+..+......|..+|...  +.+..+.
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~  161 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHA  161 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHHH
Confidence            20             0                 11223456678999999987655444444554433211  1222333


Q ss_pred             HHHhCCCCEEEEEccceecCCCCCc---c----------eeeccCCCCCCCcCHHHHHHHHHHHhhCCCC
Q 022625          220 MLMASGIPYTIIRTGVLQNTPGGKQ---G----------FQFEEGCAANGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       220 ~l~~~gl~~tivRPg~l~~~~~~~~---~----------~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      .+...|+++++||||.+........   .          .....+....+.++.+|++..++..+..+..
T Consensus       162 ~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  231 (257)
T PRK09291        162 ELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPADTG  231 (257)
T ss_pred             HHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcCCCC
Confidence            4556899999999998753211000   0          0001112234557899999999998876543

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.5e-15  Score=135.63  Aligned_cols=171  Identities=16%  Similarity=0.124  Sum_probs=119.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccc-hhhh-------cCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN-AMES-------FGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~-~~~~-------~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      .++++|+||||+|+||++++++|+++| ++|+++.|++++ +.+.       ...+++++.+|++|.++++++++     
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence            457899999999999999999999995 999999998775 3221       11368899999999887655443     


Q ss_pred             -CCcEEEEcCCc-----------------h-------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 -GVRSIICPSEG-----------------F-------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 -~~d~Vi~~~~~-----------------~-------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                       +.|++|++.+.                 +             +.+.+.+.+..+||++||..+..+......|..+|+.
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa  165 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAG  165 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHH
Confidence             57999986210                 0             2234556677899999998765544444445444432


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                        .+.+.....+..+++++++++||.+........       ......++++|+|+.++..+.++
T Consensus       166 ~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~-------~~~~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        166 LDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA-------KEAPLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC-------CCCCCCCCHHHHHHHHHHHHHcC
Confidence              122344555677899999999999874221111       11123589999999999999875

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.70  E-value=6.1e-16  Score=139.75  Aligned_cols=178  Identities=15%  Similarity=0.126  Sum_probs=122.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--------CCcEEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--------GVRSIIC  169 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--------~~d~Vi~  169 (294)
                      .+++|+||||+|+||++++++|+++|++|++++|+++++.+....+++++.+|++|.++++++++        .+|++||
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~   82 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN   82 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence            36899999999999999999999999999999999887665544578899999999988776654        3699999


Q ss_pred             cCC----c--------------------------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHHHH
Q 022625          170 PSE----G--------------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQD  217 (294)
Q Consensus       170 ~~~----~--------------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~a  217 (294)
                      +++    +                          .+.+.+++.+.++||++||..+..+......|..+|..  .+.+..
T Consensus        83 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l  162 (277)
T PRK05993         83 NGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTL  162 (277)
T ss_pred             CCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHHHH
Confidence            721    0                          02234556778899999998776655555555444431  122223


Q ss_pred             HHHHHhCCCCEEEEEccceecCCCCCcce------e---------e-------cc-CCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          218 ESMLMASGIPYTIIRTGVLQNTPGGKQGF------Q---------F-------EE-GCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       218 e~~l~~~gl~~tivRPg~l~~~~~~~~~~------~---------~-------~~-g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      ...+...|+++++|+||.+..........      .         +       .. .......++++++|+.+++++..+
T Consensus       163 ~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~~  242 (277)
T PRK05993        163 RMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHALTAP  242 (277)
T ss_pred             HHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHcCC
Confidence            33345689999999999876321110000      0         0       00 001122468999999999999865


Q ss_pred             C
Q 022625          275 P  275 (294)
Q Consensus       275 ~  275 (294)
                      .
T Consensus       243 ~  243 (277)
T PRK05993        243 R  243 (277)
T ss_pred             C
Confidence            3

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.1e-15  Score=133.01  Aligned_cols=185  Identities=14%  Similarity=0.085  Sum_probs=122.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--CCCcEEeecCCCCHHHHHHHhc---CCcEEEEcCCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPSEG  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~l~---~~d~Vi~~~~~  173 (294)
                      +|+++||||+|+||+.++++|+++ ++|+++.|+.++..+..  ...++++.+|++|.+++.++++   ++|+|||+.+.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   81 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV   81 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            579999999999999999999999 99999999976644322  1368899999999999998887   47999998221


Q ss_pred             -------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHh
Q 022625          174 -------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA  223 (294)
Q Consensus       174 -------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~  223 (294)
                                   +                 +.+.+++ +.+++|++||..++.+..+...|...+.. .....+.+..+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~v~~ss~~~~~~~~~~~~y~~~K~a-~~~~~~~~~~~  159 (227)
T PRK08219         82 ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA-AHGHVVFINSGAGLRANPGWGSYAASKFA-LRALADALREE  159 (227)
T ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCeEEEEcchHhcCcCCCCchHHHHHHH-HHHHHHHHHHH
Confidence                         0                 1111222 35789999998776655544455443321 11111111111


Q ss_pred             -CC-CCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 022625          224 -SG-IPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       224 -~g-l~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                       .+ ++++.|+||.+....................+++++|+|++++.+++.+ ..+.+|++.-.+
T Consensus       160 ~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~-~~~~~~~~~~~~  224 (227)
T PRK08219        160 EPGNVRVTSVHPGRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFAVDAP-PDAHITEVVVRP  224 (227)
T ss_pred             hcCCceEEEEecCCccchHhhhhhhhhccccCCCCCCCHHHHHHHHHHHHcCC-CCCccceEEEec
Confidence             34 9999999998653211111000011112345799999999999999774 346777776543

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.8e-15  Score=134.36  Aligned_cols=192  Identities=16%  Similarity=0.100  Sum_probs=128.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh---hcCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      ...+++++||||+|+||++++++|+++|++|+++.|+.+....   .....+..+.+|+++.+++.++++       .+|
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   91 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRID   91 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            4568999999999999999999999999999999998753221   122356789999999988877664       569


Q ss_pred             EEEEcCCc-----h---------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH--HH
Q 022625          166 SIICPSEG-----F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL  213 (294)
Q Consensus       166 ~Vi~~~~~-----~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~  213 (294)
                      ++||+.+.     +                     +..    .+.+.+.++||++||.....+......|..+|..  .+
T Consensus        92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  171 (255)
T PRK06841         92 ILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGM  171 (255)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHH
Confidence            99998321     0                     111    1334467899999998765444444455444321  11


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCCc-----ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-----GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-----~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      .+.....+...|++++.|+||.+........     ...+........+.+++|+|+.++.++..+.  ..|+++.+.+|
T Consensus       172 ~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg  251 (255)
T PRK06841        172 TKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENLVIDGG  251 (255)
T ss_pred             HHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence            2222223344789999999998863321110     0011112223456799999999999997654  36888888766


Q ss_pred             C
Q 022625          287 S  287 (294)
Q Consensus       287 ~  287 (294)
                      .
T Consensus       252 ~  252 (255)
T PRK06841        252 Y  252 (255)
T ss_pred             c
Confidence            3

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.2e-15  Score=136.90  Aligned_cols=191  Identities=14%  Similarity=0.131  Sum_probs=129.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCHHHHHHHhc------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l~------~  163 (294)
                      +.+|+++||||+++||++++++|+++|++|+++.|+.+++.+.       .+.++.++.+|++|.++++++++      .
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~   85 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE   85 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence            5689999999999999999999999999999999987654322       13367889999999988887765      4


Q ss_pred             CcEEEEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--H
Q 022625          164 VRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R  211 (294)
Q Consensus       164 ~d~Vi~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~  211 (294)
                      +|++||+.+.             +                 +...+++.+..++|++||..+..+......|...|.  .
T Consensus        86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~  165 (263)
T PRK08339         86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMA  165 (263)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHH
Confidence            6999998321             0                 122345566689999999887655444444533332  1


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCC--------cc----e---eeccCCCCCCCcCHHHHHHHHHHHhhCCC-
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QG----F---QFEEGCAANGSLSKEDAAFICVEALESIP-  275 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~--------~~----~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-  275 (294)
                      .+.+.....+...|++++.|.||.+.......        ..    .   .+...........++|+|.++++++.... 
T Consensus       166 ~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~  245 (263)
T PRK08339        166 GLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGS  245 (263)
T ss_pred             HHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhcchhc
Confidence            22333344455689999999999875221000        00    0   00011122345679999999999887643 


Q ss_pred             -CCCcEEEEecCC
Q 022625          276 -QTGLIFEVCEIS  287 (294)
Q Consensus       276 -~~g~~~~v~~g~  287 (294)
                       ..|+++.+.+|.
T Consensus       246 ~itG~~~~vdgG~  258 (263)
T PRK08339        246 YINGAMIPVDGGR  258 (263)
T ss_pred             CccCceEEECCCc
Confidence             467888886653

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.3e-15  Score=136.55  Aligned_cols=182  Identities=13%  Similarity=0.078  Sum_probs=123.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcC-------CcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~-------~d~Vi~~~  171 (294)
                      +++++||||+|+||++++++|+++|++|++++|++++...  ..+++++.+|++|.++++++++.       +|++||+.
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~a   81 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--IPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNA   81 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence            5789999999999999999999999999999998766442  24688999999999998888764       59999983


Q ss_pred             Cc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHHHHHH
Q 022625          172 EG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDES  219 (294)
Q Consensus       172 ~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~ae~  219 (294)
                      +.             +                 +.+.+++.+.++||++||..+..+......|..+|..  .+.+....
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~  161 (270)
T PRK06179         82 GVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDH  161 (270)
T ss_pred             CCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence            21             0                 1122456788999999998776655444455444331  12223333


Q ss_pred             HHHhCCCCEEEEEccceecCCCCCcc---eeec------------cCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEE
Q 022625          220 MLMASGIPYTIIRTGVLQNTPGGKQG---FQFE------------EGCAANGSLSKEDAAFICVEALESIPQTGLIFEV  283 (294)
Q Consensus       220 ~l~~~gl~~tivRPg~l~~~~~~~~~---~~~~------------~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v  283 (294)
                      .+...|+++++|+||++.........   ....            .........+.+|+|+.++.++..+.. ...|..
T Consensus       162 el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~-~~~~~~  239 (270)
T PRK06179        162 EVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGPWP-KMRYTA  239 (270)
T ss_pred             HHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCCCC-CeeEec
Confidence            45568999999999987632211100   0000            001112346789999999999876542 344543

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.8e-15  Score=134.66  Aligned_cols=197  Identities=14%  Similarity=0.122  Sum_probs=133.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh-----hcCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----SFGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~-----~~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      .+.+++++||||+|+||++++++|+++|++|+++.|++++...     ....+++++.+|+++.+++.++++       +
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGR   83 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            4668999999999999999999999999999999998865411     123468899999999998887775       4


Q ss_pred             CcEEEEcCCc------------h-------------HHhhh---hhcCCCEEEEecccccccCCCCchhccchhHHH--H
Q 022625          164 VRSIICPSEG------------F-------------ISNAG---SLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--L  213 (294)
Q Consensus       164 ~d~Vi~~~~~------------~-------------~~~~~---~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~  213 (294)
                      +|+|||+.+.            +             +...+   .+.+.++||++||..+..+......|..+|...  +
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~  163 (258)
T PRK08628         84 IDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLAL  163 (258)
T ss_pred             CCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHHHHHHH
Confidence            6999998321            0             11111   122347899999988776555555565444321  2


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCCc-------ce-e---eccCCC-CCCCcCHHHHHHHHHHHhhCCC--CCCc
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-------GF-Q---FEEGCA-ANGSLSKEDAAFICVEALESIP--QTGL  279 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-------~~-~---~~~g~~-~~~~Is~eDvA~~iv~aL~~~~--~~g~  279 (294)
                      .+.....+...+++++.|+||.+.. +....       .. .   ...... ...+++++|+|+++++++....  ..|+
T Consensus       164 ~~~l~~e~~~~~i~v~~v~pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~  242 (258)
T PRK08628        164 TREWAVALAKDGVRVNAVIPAEVMT-PLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQ  242 (258)
T ss_pred             HHHHHHHHhhcCeEEEEEecCccCC-HHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhccccCc
Confidence            2222233445789999999998763 21100       00 0   000001 1246789999999999997653  5688


Q ss_pred             EEEEecCCcccccc
Q 022625          280 IFEVCEISNLCEQL  293 (294)
Q Consensus       280 ~~~v~~g~~~~~ei  293 (294)
                      .|.+.++....++.
T Consensus       243 ~~~~~gg~~~~~~~  256 (258)
T PRK08628        243 WLFVDGGYVHLDRA  256 (258)
T ss_pred             eEEecCCccccccc
Confidence            99998887777664

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.69  E-value=1.1e-15  Score=136.15  Aligned_cols=191  Identities=15%  Similarity=0.119  Sum_probs=127.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cC-CCcEEeecCCCCHHHHHHHhc-------C
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~-~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +++|+||||+|+||+++++.|+++|++|+++.|+..+....       .+ ..++++.+|++|.+.+.++++       .
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999999987543221       11 358889999999988876654       4


Q ss_pred             CcEEEEcCCc-------------h-----------------HHhhhhhcC-CCEEEEecccccccCCCCchhccchhHH-
Q 022625          164 VRSIICPSEG-------------F-----------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       164 ~d~Vi~~~~~-------------~-----------------~~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      .|++||+++.             +                 +...+.+.+ -.+||++||.....+......|..+|.. 
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~  161 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG  161 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHH
Confidence            6999998320             0                 111233345 3699999997654333333445444331 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----------------eeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----------------FQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----------------~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                       .+.+.....+...|+++++||||.+++.+.....                ..+..+.....+++++|++.+++.++.+.
T Consensus       162 ~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~  241 (259)
T PRK12384        162 VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK  241 (259)
T ss_pred             HHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcc
Confidence             1222223334458999999999976532211000                00112333456789999999999988754


Q ss_pred             C--CCCcEEEEecCCcc
Q 022625          275 P--QTGLIFEVCEISNL  289 (294)
Q Consensus       275 ~--~~g~~~~v~~g~~~  289 (294)
                      .  ..|++|++.+|.+.
T Consensus       242 ~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        242 ASYCTGQSINVTGGQVM  258 (259)
T ss_pred             cccccCceEEEcCCEEe
Confidence            3  36899999988753

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=1.7e-15  Score=133.42  Aligned_cols=191  Identities=13%  Similarity=0.065  Sum_probs=127.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~-~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+++++||||+|+||++++++|+++|++|+++ .|+.++....      .+..+.++.+|++|.+++.++++       
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            457899999999999999999999999999998 8877654322      12358889999999998877765       


Q ss_pred             CCcEEEEcCCc-------------h-------------HH----hhhhhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          163 GVRSIICPSEG-------------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       163 ~~d~Vi~~~~~-------------~-------------~~----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      ++|+|||+.+.             +             +.    ..+.+.+.++||++||.....+......|..++.. 
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~  162 (247)
T PRK05565         83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAV  162 (247)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHHH
Confidence            68999997321             0             11    12334567889999998765544333344333321 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                       .+.+.....+...|++++++|||.+.........    ..+..........+++|+|++++.++....  ..|+.+++.
T Consensus       163 ~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~  242 (247)
T PRK05565        163 NAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQIITVD  242 (247)
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEec
Confidence             1112222234457999999999987633221110    001111222345789999999999987644  468899888


Q ss_pred             cCC
Q 022625          285 EIS  287 (294)
Q Consensus       285 ~g~  287 (294)
                      ++.
T Consensus       243 ~~~  245 (247)
T PRK05565        243 GGW  245 (247)
T ss_pred             CCc
Confidence            764

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.68  E-value=1.9e-15  Score=134.10  Aligned_cols=177  Identities=14%  Similarity=0.084  Sum_probs=118.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcEEEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSIIC  169 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi~  169 (294)
                      |+|+||||+|+||.+++++|+++|++|+++.|+++++...   .+.+++++.+|++|.+++.++++       ++|+|||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5899999999999999999999999999999998765443   23468889999999988877664       6799999


Q ss_pred             cCCc------h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HHHH
Q 022625          170 PSEG------F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQ  216 (294)
Q Consensus       170 ~~~~------~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~  216 (294)
                      +.+.      +                         +...+.+.+.++||++||.....+..+...|..++...  +.+.
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~  160 (248)
T PRK10538         81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN  160 (248)
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHH
Confidence            8321      0                         11224456778999999987665444444554433211  1111


Q ss_pred             HHHHHHhCCCCEEEEEccceecCCCCC-----cceeeccCCCCCCCcCHHHHHHHHHHHhhCCCC
Q 022625          217 DESMLMASGIPYTIIRTGVLQNTPGGK-----QGFQFEEGCAANGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       217 ae~~l~~~gl~~tivRPg~l~~~~~~~-----~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      ....+...++.+++|+||.+.+.+...     .............+++++|+|+++++++..+..
T Consensus       161 l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~  225 (248)
T PRK10538        161 LRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVATLPAH  225 (248)
T ss_pred             HHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHHhcCCCc
Confidence            222233468999999999986222110     000000001123467999999999999987654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.68  E-value=3.3e-15  Score=132.10  Aligned_cols=191  Identities=14%  Similarity=0.079  Sum_probs=126.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-ccchhhh------cCCCcEEeecCCCCHHHHHHHhcC------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES------FGTYVESMAGDASNKKFLKTALRG------  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~-~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~~------  163 (294)
                      ..+++++||||+|+||++++++|+++|++|+++.+. ++...+.      .+..+.++.+|++|.+++.++++.      
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999999999876553 3332221      123588899999999988877765      


Q ss_pred             -CcEEEEcCCc-----h---------------------HHhh----hhhcCCCEEEEecccccccCCCCchhccchhHHH
Q 022625          164 -VRSIICPSEG-----F---------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK  212 (294)
Q Consensus       164 -~d~Vi~~~~~-----~---------------------~~~~----~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~  212 (294)
                       +|+|||+++.     +                     +.++    +.+.+.++||++||..+..+..+...|..++..-
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  163 (247)
T PRK12935         84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGM  163 (247)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHH
Confidence             6999998321     0                     1111    2234557999999987665544555565444311


Q ss_pred             --HHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcEEEEec
Q 022625          213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVCE  285 (294)
Q Consensus       213 --~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~~~v~~  285 (294)
                        +.+.....+...++++++++||.+.........    ..+........+.+++|++++++.++.... ..|+.|++.+
T Consensus       164 ~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~  243 (247)
T PRK12935        164 LGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRDGAYITGQQLNING  243 (247)
T ss_pred             HHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCC
Confidence              111112222346899999999987632211100    011123344567899999999999886543 5689999988


Q ss_pred             CC
Q 022625          286 IS  287 (294)
Q Consensus       286 g~  287 (294)
                      +.
T Consensus       244 g~  245 (247)
T PRK12935        244 GL  245 (247)
T ss_pred             Cc
Confidence            74

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.68  E-value=2.8e-15  Score=133.69  Aligned_cols=189  Identities=13%  Similarity=0.081  Sum_probs=122.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch--hhh---cCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--MES---FGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~--~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|++...  .+.   .+..+.++.+|++|.+++.++++       .+
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            4579999999999999999999999999999999975321  111   12357788999999887776654       56


Q ss_pred             cEEEEcCCc------h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          165 RSIICPSEG------F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       165 d~Vi~~~~~------~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      |++||+++.      +                         +...+.+.+..+||++||...+..  ...+|..+|..  
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~Y~~sK~a~~  163 (260)
T PRK12823         86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI--NRVPYSAAKGGVN  163 (260)
T ss_pred             eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC--CCCccHHHHHHHH
Confidence            999998421      0                         122244556779999999876532  22244333321  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCC--------cc-ee--------eccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QG-FQ--------FEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~--------~~-~~--------~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      .+.+.....+...|+++++|+||.+.......        .. ..        ...+....-+.+++|+|+++++++...
T Consensus       164 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  243 (260)
T PRK12823        164 ALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLASDE  243 (260)
T ss_pred             HHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCcc
Confidence            11222222233469999999999987321100        00 00        001111123457899999999988764


Q ss_pred             C--CCCcEEEEecCC
Q 022625          275 P--QTGLIFEVCEIS  287 (294)
Q Consensus       275 ~--~~g~~~~v~~g~  287 (294)
                      .  ..|+.|++.+|+
T Consensus       244 ~~~~~g~~~~v~gg~  258 (260)
T PRK12823        244 ASYITGTVLPVGGGD  258 (260)
T ss_pred             cccccCcEEeecCCC
Confidence            3  468999998775

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.68  E-value=3.2e-15  Score=132.43  Aligned_cols=187  Identities=13%  Similarity=0.044  Sum_probs=126.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcC-------CcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~-------~d~Vi~  169 (294)
                      +.+|+++||||+|+||+.++++|+++|++|+++.|+..   ...+..++++.+|++|.+++.++++.       +|++||
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL---TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN   82 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh---hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            56799999999999999999999999999999999871   12234688899999999988887753       699999


Q ss_pred             cCCc-----h---------------------HHhh----hhhcCCCEEEEecccccccCCCCchhccchhHH--HHHHHH
Q 022625          170 PSEG-----F---------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQD  217 (294)
Q Consensus       170 ~~~~-----~---------------------~~~~----~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~a  217 (294)
                      +.+.     +                     +.++    +++.+..+||++||.....+......|..+|..  .+.+..
T Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l  162 (252)
T PRK08220         83 AAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCV  162 (252)
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHHHH
Confidence            8221     0                     1111    234456799999998776555555555444431  122222


Q ss_pred             HHHHHhCCCCEEEEEccceecCCCCC--------cc------eeeccCCCCCCCcCHHHHHHHHHHHhhCC--CCCCcEE
Q 022625          218 ESMLMASGIPYTIIRTGVLQNTPGGK--------QG------FQFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIF  281 (294)
Q Consensus       218 e~~l~~~gl~~tivRPg~l~~~~~~~--------~~------~~~~~g~~~~~~Is~eDvA~~iv~aL~~~--~~~g~~~  281 (294)
                      ...+...++++++++||.+.......        ..      ..+..+.....+++++|+|+++++++...  ...++++
T Consensus       163 a~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i  242 (252)
T PRK08220        163 GLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDLASHITLQDI  242 (252)
T ss_pred             HHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcchhcCccCcEE
Confidence            33334578999999999876321100        00      00111222345789999999999988754  3467888


Q ss_pred             EEecC
Q 022625          282 EVCEI  286 (294)
Q Consensus       282 ~v~~g  286 (294)
                      .+.+|
T Consensus       243 ~~~gg  247 (252)
T PRK08220        243 VVDGG  247 (252)
T ss_pred             EECCC
Confidence            87776

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.7e-15  Score=135.70  Aligned_cols=178  Identities=16%  Similarity=0.135  Sum_probs=120.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+.+.+.+..      +..+.++.+|++|.+++.++++       .
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999999999876544321      2357788999999998887765       3


Q ss_pred             CcEEEEcCC----c-h---------------------HHh----hhhhcC-CCEEEEecccccccCCCCchhccchhHH-
Q 022625          164 VRSIICPSE----G-F---------------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       164 ~d~Vi~~~~----~-~---------------------~~~----~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      +|++||+.+    + +                     +..    .+.+.+ ..+||++||..++.+..+...|..+|.. 
T Consensus        84 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  163 (275)
T PRK05876         84 VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGV  163 (275)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHH
Confidence            699999732    1 0                     111    123344 4789999998877666555566544431 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----e---------eeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----F---------QFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~---------~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                       .+.+.....+...|+++++|+||.+.........    .         .++........++++|+|+.++.++.+.
T Consensus       164 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~  240 (275)
T PRK05876        164 VGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN  240 (275)
T ss_pred             HHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHcC
Confidence             1222222233457999999999987643211100    0         0111112345789999999999999763

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.6e-15  Score=134.01  Aligned_cols=191  Identities=11%  Similarity=0.045  Sum_probs=127.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh--------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|++++..+.        .+..+.++.+|++|.+++.++++      
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999999999987654332        12357789999999988877765      


Q ss_pred             -CCcEEEEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 -GVRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 -~~d~Vi~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                       .+|++||+.+.             +                 +...+++.+..+||++||.....+......|..+|..
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa  164 (260)
T PRK07063         85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHG  164 (260)
T ss_pred             CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHH
Confidence             57999998321             0                 1112334556799999998776655555555444431


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-----c-e----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-----G-F----QFEEGCAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-----~-~----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                        .+.+.....+...|++++.|+||.+........     . .    ....-.....+..++|+|.++++++.+..  ..
T Consensus       165 ~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~~it  244 (260)
T PRK07063        165 LLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPFIN  244 (260)
T ss_pred             HHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccccC
Confidence              122222223344789999999998753211100     0 0    00000111235689999999999887654  46


Q ss_pred             CcEEEEecCC
Q 022625          278 GLIFEVCEIS  287 (294)
Q Consensus       278 g~~~~v~~g~  287 (294)
                      |+.+.+.+|.
T Consensus       245 G~~i~vdgg~  254 (260)
T PRK07063        245 ATCITIDGGR  254 (260)
T ss_pred             CcEEEECCCe
Confidence            7888886663

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.68  E-value=7.5e-16  Score=136.06  Aligned_cols=177  Identities=19%  Similarity=0.187  Sum_probs=120.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-CCcEEEEcCCc------h
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSIICPSEG------F  174 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-~~d~Vi~~~~~------~  174 (294)
                      |+||||||+||++|+.+|.+.||+|++++|++.+....+...+.       ..+.+.+... ++|+|||.++.      +
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~-------~~~~~~~~~~~~~DavINLAG~~I~~rrW   73 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVT-------LWEGLADALTLGIDAVINLAGEPIAERRW   73 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCcccc-------ccchhhhcccCCCCEEEECCCCccccccC
Confidence            68999999999999999999999999999999887655443322       1233344444 79999998331      0


Q ss_pred             ------------------HHhhh--hhcCCCEEEEecccccccCCCCc---------hhccchhHHHHHHHHHHHHHhCC
Q 022625          175 ------------------ISNAG--SLKGVQHVILLSQLSVYRGSGGI---------QALMKGNARKLAEQDESMLMASG  225 (294)
Q Consensus       175 ------------------~~~~~--~~~gv~r~V~vSs~~~~~~~~~~---------~~~~~~~~~~~~~~ae~~l~~~g  225 (294)
                                        +.++.  .+.+++.++.-|.++.|......         ..+...-.+.|..++ ......|
T Consensus        74 t~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a-~~a~~~g  152 (297)
T COG1090          74 TEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEA-LQAQQLG  152 (297)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHH-hhhhhcC
Confidence                              22333  35567777777777777643211         111111123333222 2234479


Q ss_pred             CCEEEEEccceecCCC-----------CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 022625          226 IPYTIIRTGVLQNTPG-----------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       226 l~~tivRPg~l~~~~~-----------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                      .+++++|.|.+....+           .+-+-.++.|.+..+|||+||+.+++.+++++++.. ..||++++.
T Consensus       153 tRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~ls-Gp~N~taP~  224 (297)
T COG1090         153 TRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLS-GPFNLTAPN  224 (297)
T ss_pred             ceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCC-CcccccCCC
Confidence            9999999999884333           122345678899999999999999999999997665 488988763

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.68  E-value=3.1e-15  Score=132.31  Aligned_cols=190  Identities=15%  Similarity=0.138  Sum_probs=123.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhh---hcCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME---SFGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~---~~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+... ..+   ..+..+.++.+|+++.+++.++++       .+|
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            467999999999999999999999999999999997532 111   123468899999999988876654       479


Q ss_pred             EEEEcCCc-----h---------------------HHhh----hhhcC-CCEEEEecccccccCCCCchhccchhHHH--
Q 022625          166 SIICPSEG-----F---------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARK--  212 (294)
Q Consensus       166 ~Vi~~~~~-----~---------------------~~~~----~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~~--  212 (294)
                      ++||+.+.     +                     +.+.    +.+.+ ..++|++||...+.+......|..+|..-  
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  162 (248)
T TIGR01832        83 ILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAG  162 (248)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHH
Confidence            99998221     0                     1111    22333 46999999987765544444554443311  


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCCC-cc--e---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG--F---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-~~--~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                      +.+.....+...|+++++|+||++....... ..  .   .+........+++++|+|++++.++....  ..|.++.+.
T Consensus       163 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d  242 (248)
T TIGR01832       163 LTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTLAVD  242 (248)
T ss_pred             HHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCcEEEeC
Confidence            1122222223368999999999876332110 00  0   00011223567899999999999997644  357777776


Q ss_pred             cC
Q 022625          285 EI  286 (294)
Q Consensus       285 ~g  286 (294)
                      +|
T Consensus       243 gg  244 (248)
T TIGR01832       243 GG  244 (248)
T ss_pred             CC
Confidence            55

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.68  E-value=6e-15  Score=129.24  Aligned_cols=184  Identities=14%  Similarity=0.098  Sum_probs=122.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc------CCcEEEEcC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICPS  171 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~------~~d~Vi~~~  171 (294)
                      .+|+++||||+|+||++++++|+++|++|+++.|+.++.   .  ..+++.+|++|.++++++++      ++|++||+.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a   76 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---F--PGELFACDLADIEQTAATLAQINEIHPVDAIVNNV   76 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---c--CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence            368999999999999999999999999999999987651   1  23678999999988877765      579999972


Q ss_pred             Cc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHHHHHH
Q 022625          172 EG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDES  219 (294)
Q Consensus       172 ~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~ae~  219 (294)
                      +.     +                         +...+++.+.++||++||...+. ......|..++..  .+.+....
T Consensus        77 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~~~Y~~sK~a~~~~~~~~a~  155 (234)
T PRK07577         77 GIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFG-ALDRTSYSAAKSALVGCTRTWAL  155 (234)
T ss_pred             CCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccC-CCCchHHHHHHHHHHHHHHHHHH
Confidence            21     0                         12234556788999999986543 2233345443321  12222223


Q ss_pred             HHHhCCCCEEEEEccceecCCCCCcce-------eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          220 MLMASGIPYTIIRTGVLQNTPGGKQGF-------QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       220 ~l~~~gl~~tivRPg~l~~~~~~~~~~-------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      .+...|+++++||||.+..........       .............++|+|.+++.++..+.  ..|..+.+.++.
T Consensus       156 e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        156 ELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             HHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEEecCCc
Confidence            344579999999999876322110000       00001111223478999999999987653  468888887664

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.68  E-value=3.3e-15  Score=132.98  Aligned_cols=190  Identities=15%  Similarity=0.102  Sum_probs=125.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc----CCCcEEeecCCCCHHHHHHHhc-------CCcEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF----GTYVESMAGDASNKKFLKTALR-------GVRSI  167 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~v~~v~~D~~d~~~l~~~l~-------~~d~V  167 (294)
                      +++++||||+|+||+.++++|+++|++|++++|++++.....    ...++++.+|+.|.+++.++++       ++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            578999999999999999999999999999999887643321    2368889999999998887775       47999


Q ss_pred             EEcCCc-----h---------------------HH----hhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHH
Q 022625          168 ICPSEG-----F---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE  215 (294)
Q Consensus       168 i~~~~~-----~---------------------~~----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~  215 (294)
                      ||+.+.     +                     +.    ..+.+.+.++||++||....... +...|..++..  .+.+
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~~~~y~~sK~a~~~~~~  160 (257)
T PRK07074         82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-GHPAYSAAKAGLIHYTK  160 (257)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-CCcccHHHHHHHHHHHH
Confidence            998321     0                     11    12344566899999997544322 22234333321  1112


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCCCCc---ceee----ccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPGGKQ---GFQF----EEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~~~~---~~~~----~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      .....+...+++++++|||++........   ...+    ........+++++|++++++.++.+..  ..|+.+++.+|
T Consensus       161 ~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  240 (257)
T PRK07074        161 LLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGG  240 (257)
T ss_pred             HHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCC
Confidence            22222334689999999998763211110   0000    112234678999999999999996543  45889988887


Q ss_pred             Ccc
Q 022625          287 SNL  289 (294)
Q Consensus       287 ~~~  289 (294)
                      ...
T Consensus       241 ~~~  243 (257)
T PRK07074        241 LTA  243 (257)
T ss_pred             cCc
Confidence            544

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.5e-15  Score=133.57  Aligned_cols=191  Identities=17%  Similarity=0.145  Sum_probs=127.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      ..+|+++||||+|+||.+++++|+++|++|++++|+++++.+..      +..+.++.+|++|.++++++++       .
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            45789999999999999999999999999999999887644321      2357889999999988877765       5


Q ss_pred             CcEEEEcCC------ch-------------------------HHhhhhhcCCCEEEEeccccccc-CCCCchhccchhHH
Q 022625          164 VRSIICPSE------GF-------------------------ISNAGSLKGVQHVILLSQLSVYR-GSGGIQALMKGNAR  211 (294)
Q Consensus       164 ~d~Vi~~~~------~~-------------------------~~~~~~~~gv~r~V~vSs~~~~~-~~~~~~~~~~~~~~  211 (294)
                      +|++||+.+      .+                         +...+++.+..+||++||..+.. +......|..+|..
T Consensus        84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a  163 (254)
T PRK07478         84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAG  163 (254)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHH
Confidence            699999832      10                         11224455667999999987653 33344455444432


Q ss_pred             H--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcce-----eeccC-CCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF-----QFEEG-CAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       212 ~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~-----~~~~g-~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                      .  +.+.....+...|+++++|+||++..........     .+... .......+++|+|+.+++++.++.  ..|+++
T Consensus       164 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~  243 (254)
T PRK07478        164 LIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGTAL  243 (254)
T ss_pred             HHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCeE
Confidence            1  2222223334468999999999976331111000     00011 112335689999999999887654  468888


Q ss_pred             EEecCC
Q 022625          282 EVCEIS  287 (294)
Q Consensus       282 ~v~~g~  287 (294)
                      .+.+|.
T Consensus       244 ~~dgg~  249 (254)
T PRK07478        244 LVDGGV  249 (254)
T ss_pred             EeCCch
Confidence            887653

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.1e-15  Score=134.13  Aligned_cols=190  Identities=10%  Similarity=0.094  Sum_probs=124.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|++++..+..      +..++++.+|++|.++++++++       .
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            35799999999999999999999999999999999886543321      2357889999999988876664       4


Q ss_pred             CcEEEEcCCc------h---------------------HHhhhhh---cCCCEEEEecccccccCCCCchhccchhHHH-
Q 022625          164 VRSIICPSEG------F---------------------ISNAGSL---KGVQHVILLSQLSVYRGSGGIQALMKGNARK-  212 (294)
Q Consensus       164 ~d~Vi~~~~~------~---------------------~~~~~~~---~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~-  212 (294)
                      +|++||+.+.      +                     +.+++..   ...++||++||.....+..+...|..++... 
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~  162 (258)
T PRK07890         83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALL  162 (258)
T ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHHHH
Confidence            6999998321      0                     1112211   1235999999987766554444554433211 


Q ss_pred             -HHHHHHHHHHhCCCCEEEEEccceecCCCCCc---------ce-------eeccCCCCCCCcCHHHHHHHHHHHhhCC-
Q 022625          213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ---------GF-------QFEEGCAANGSLSKEDAAFICVEALESI-  274 (294)
Q Consensus       213 -~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~---------~~-------~~~~g~~~~~~Is~eDvA~~iv~aL~~~-  274 (294)
                       +.+.....+...+++++++|||.+.. +....         ..       .+........+.+++|+|++++.++... 
T Consensus       163 ~l~~~~a~~~~~~~i~v~~v~pg~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~  241 (258)
T PRK07890        163 AASQSLATELGPQGIRVNSVAPGYIWG-DPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLA  241 (258)
T ss_pred             HHHHHHHHHHhhcCcEEEEEeCCccCc-HHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHhh
Confidence             11222222344689999999998763 21100         00       0001122234678899999999988753 


Q ss_pred             -CCCCcEEEEecCC
Q 022625          275 -PQTGLIFEVCEIS  287 (294)
Q Consensus       275 -~~~g~~~~v~~g~  287 (294)
                       ...|+++.+.+|.
T Consensus       242 ~~~~G~~i~~~gg~  255 (258)
T PRK07890        242 RAITGQTLDVNCGE  255 (258)
T ss_pred             hCccCcEEEeCCcc
Confidence             3467888776664

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.67  E-value=3.7e-16  Score=142.31  Aligned_cols=172  Identities=15%  Similarity=0.108  Sum_probs=115.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcC--CcEEEEcCCc----
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG----  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~~~~~----  173 (294)
                      |+||||||+|++|+++.++|.++|++|+.+.|+               ..|++|.+.+.+.++.  .|+|||+++-    
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~   65 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVD   65 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------CS-TTSHHHHHHHHHHH--SEEEE------HH
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------hcCCCCHHHHHHHHHHhCCCeEeccceeecHH
Confidence            689999999999999999999999999998776               5789999999999875  5999998320    


Q ss_pred             ------------------hHHhhhhhcCCCEEEEecccccccCCCCc--hh---ccc-hhHHHHHHHHHHHHHhCCCCEE
Q 022625          174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--QA---LMK-GNARKLAEQDESMLMASGIPYT  229 (294)
Q Consensus       174 ------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~--~~---~~~-~~~~~~~~~ae~~l~~~gl~~t  229 (294)
                                        .++++|.+.|. ++||+||..++......  .+   ..+ +.+-..|.++|+.+++..-++.
T Consensus        66 ~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~~~~~  144 (286)
T PF04321_consen   66 ACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAACPNAL  144 (286)
T ss_dssp             HHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-SSEE
T ss_pred             hhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhcCCEE
Confidence                              15556777775 89999999887543111  11   111 2223356788999988555999


Q ss_pred             EEEccceecCCCC------------CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC---CCCcEEEEecCCc
Q 022625          230 IIRTGVLQNTPGG------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIP---QTGLIFEVCEISN  288 (294)
Q Consensus       230 ivRPg~l~~~~~~------------~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~---~~g~~~~v~~g~~  288 (294)
                      |+|++++++....            +..+. ...+...++++++|+|+++..++++..   ....+||+++++.
T Consensus       145 IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~-~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~  217 (286)
T PF04321_consen  145 ILRTSWVYGPSGRNFLRWLLRRLRQGEPIK-LFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPER  217 (286)
T ss_dssp             EEEE-SEESSSSSSHHHHHHHHHHCTSEEE-EESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-
T ss_pred             EEecceecccCCCchhhhHHHHHhcCCeeE-eeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCcc
Confidence            9999998844221            11111 133555788999999999999998753   2468999999863

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.67  E-value=4.3e-15  Score=131.44  Aligned_cols=189  Identities=16%  Similarity=0.100  Sum_probs=123.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      ..+|+++||||+|+||++++++|+++|++|+++.|+++.....      ....+.++.+|++|.++++++++       .
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG   83 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4578999999999999999999999999999999987643221      12357788999999988776654       5


Q ss_pred             CcEEEEcCCc--------h---------------------HH----hhhhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          164 VRSIICPSEG--------F---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       164 ~d~Vi~~~~~--------~---------------------~~----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                      +|+|||+++.        +                     +.    ..+.+.+.++||++||..++.+.   ..|..+|.
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---~~Y~~sK~  160 (250)
T PRK07774         84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS---NFYGLAKV  160 (250)
T ss_pred             CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCc---cccHHHHH
Confidence            7999998321        0                     11    11233456799999998776433   23433322


Q ss_pred             HH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCc-c-e---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G-F---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       211 ~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~-~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                      ..  +.+.....+...++++++++||.+........ . .   ....+.......+++|+|++++.++..+.  ..|++|
T Consensus       161 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~  240 (250)
T PRK07774        161 GLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQIF  240 (250)
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcCCCEE
Confidence            11  11111122233689999999998763321110 0 0   01112222335689999999999887643  468999


Q ss_pred             EEecCCc
Q 022625          282 EVCEISN  288 (294)
Q Consensus       282 ~v~~g~~  288 (294)
                      ++.+|..
T Consensus       241 ~v~~g~~  247 (250)
T PRK07774        241 NVDGGQI  247 (250)
T ss_pred             EECCCee
Confidence            9988753

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.67  E-value=6e-15  Score=131.56  Aligned_cols=191  Identities=14%  Similarity=0.128  Sum_probs=127.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc--chhhh---cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NAMES---FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~--~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      .+.+++++||||+|+||+.++++|+++|++|+++.|+..  ++.+.   .+..+.++.+|++|.+++.++++       .
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK   91 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            456899999999999999999999999999999998832  12111   23468899999999988887765       5


Q ss_pred             CcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          164 VRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       164 ~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      +|++||+.+.     +                         +...+.+.+.+++|++||..++.+......|..+|..  
T Consensus        92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  171 (258)
T PRK06935         92 IDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVA  171 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHH
Confidence            6999997221     0                         1122445566799999998876655444455444321  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCC----cc--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----~~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                      .+.+.....+...|+++++|+||.+.......    ..  ...........+..++|+|..+.+++....  ..|.++.+
T Consensus       172 ~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~  251 (258)
T PRK06935        172 GLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNGHILAV  251 (258)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEE
Confidence            12222223334578999999999876321100    00  001111223456789999999999887543  46888888


Q ss_pred             ecC
Q 022625          284 CEI  286 (294)
Q Consensus       284 ~~g  286 (294)
                      .+|
T Consensus       252 dgg  254 (258)
T PRK06935        252 DGG  254 (258)
T ss_pred             CCC
Confidence            776

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.67  E-value=7e-15  Score=130.77  Aligned_cols=193  Identities=12%  Similarity=0.081  Sum_probs=129.8

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      .....+|+++||||+|+||+.++++|+++|++|+++.|+++++.+.      .+..+.++.+|++|.+++.++++     
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            3446789999999999999999999999999999999987654322      23358899999999988877665     


Q ss_pred             --CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 --GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 --~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                        .+|++||+.+.     +                         +.+.+.+.+.++||++||..+..+......|..++.
T Consensus        86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~  165 (256)
T PRK06124         86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQ  165 (256)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHH
Confidence              34899998221     0                         112334456789999999877655444445544432


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc----ce--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      .  .+.+.....+...+++++.|+||.+........    ..  .+........+++++|++.+++.++.++.  ..|+.
T Consensus       166 a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~  245 (256)
T PRK06124        166 GLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHV  245 (256)
T ss_pred             HHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCCE
Confidence            1  112222222344689999999998773221100    00  01111123457899999999999998754  35788


Q ss_pred             EEEecC
Q 022625          281 FEVCEI  286 (294)
Q Consensus       281 ~~v~~g  286 (294)
                      +.+.+|
T Consensus       246 i~~dgg  251 (256)
T PRK06124        246 LAVDGG  251 (256)
T ss_pred             EEECCC
Confidence            877665

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.67  E-value=5.4e-15  Score=130.17  Aligned_cols=192  Identities=13%  Similarity=0.098  Sum_probs=126.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      +.+++++||||+|+||++++++|+++|+.|++..|+.+++...   .+.+++++.+|++|.++++++++       .+|+
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4578999999999999999999999999999888887665432   23468889999999988877653       5799


Q ss_pred             EEEcCCc-------------h-------------HHhh----hhhcCCCEEEEecccccccCCCCchhccchhH--HHHH
Q 022625          167 IICPSEG-------------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA  214 (294)
Q Consensus       167 Vi~~~~~-------------~-------------~~~~----~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~  214 (294)
                      |||+++.             +             +.++    +.+.+.++||++||.....+......|..++.  ..+.
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~  163 (245)
T PRK12936         84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFS  163 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHHHH
Confidence            9998321             0             1111    22346689999999866544333344544332  1122


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCCCCCcce----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGF----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      +.....+...++++++++||++..........    .+..........+.+|+++++.+++..+.  ..|+.|++.+|..
T Consensus       164 ~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~~  243 (245)
T PRK12936        164 KSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGGMA  243 (245)
T ss_pred             HHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCcc
Confidence            22223344578999999999875321111000    00011122335578999999998886544  3689999988754

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.67  E-value=3.6e-15  Score=133.00  Aligned_cols=170  Identities=14%  Similarity=0.100  Sum_probs=117.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-----CCcEEeecCCCCHHHHHHHhcC-------CcE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALRG-------VRS  166 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----~~v~~v~~D~~d~~~l~~~l~~-------~d~  166 (294)
                      +|+|+||||+|+||++++++|+++|++|+++.|+.+++.+...     ..++++.+|++|.+++.++++.       +|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            5799999999999999999999999999999998876543211     1578899999999988777643       599


Q ss_pred             EEEcCCc-----------h--------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--H
Q 022625          167 IICPSEG-----------F--------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--L  213 (294)
Q Consensus       167 Vi~~~~~-----------~--------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~  213 (294)
                      +||+.+.           .                    +...+++.+..+||++||.....+......|..+|...  +
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  161 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKY  161 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHHH
Confidence            9997210           0                    11234556678999999987765544444554443311  1


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      .+.....+...|+++++||||++........      .......++++++|+.++.++.+.
T Consensus       162 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~~~~~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        162 LESLRVELRPAGVRVVTIAPGYIRTPMTAHN------PYPMPFLMDADRFAARAARAIARG  216 (257)
T ss_pred             HHHHHHHhhccCcEEEEEecCCCcCchhhcC------CCCCCCccCHHHHHHHHHHHHhCC
Confidence            2222233455799999999999873211111      001112468999999999999764

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.66  E-value=5.8e-15  Score=131.61  Aligned_cols=190  Identities=16%  Similarity=0.172  Sum_probs=126.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHh-------cCCcEEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSII  168 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l-------~~~d~Vi  168 (294)
                      ...+|+++||||+|+||++++++|+++|++|+++.|+.+..   .+..+.++.+|++|.+++.+++       ..+|+||
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   82 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILV   82 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45689999999999999999999999999999999987542   2346888999999998776554       3569999


Q ss_pred             EcCCc-------h-------------------------HHhhhhhcCCCEEEEecccccccCCC-CchhccchhHH--HH
Q 022625          169 CPSEG-------F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSG-GIQALMKGNAR--KL  213 (294)
Q Consensus       169 ~~~~~-------~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~-~~~~~~~~~~~--~~  213 (294)
                      |+.+.       +                         +...+++.+..+||++||.....+.. ....|..+|..  .+
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~~l  162 (260)
T PRK06523         83 HVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTY  162 (260)
T ss_pred             ECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHHHHHH
Confidence            97321       0                         11223445667899999987765422 34455443321  12


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCCc--------ceee----------ccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--------GFQF----------EEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~--------~~~~----------~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      .+.....+...|+++++|+||.+........        ...+          ..+.........+|+|+++++++..+.
T Consensus       163 ~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~~~  242 (260)
T PRK06523        163 SKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASDRA  242 (260)
T ss_pred             HHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCccc
Confidence            2222333445789999999998763211000        0000          001122334678999999999997643


Q ss_pred             --CCCcEEEEecCCc
Q 022625          276 --QTGLIFEVCEISN  288 (294)
Q Consensus       276 --~~g~~~~v~~g~~  288 (294)
                        ..|+.+.+.+|..
T Consensus       243 ~~~~G~~~~vdgg~~  257 (260)
T PRK06523        243 ASITGTEYVIDGGTV  257 (260)
T ss_pred             ccccCceEEecCCcc
Confidence              5689999988743

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.66  E-value=3.9e-15  Score=133.78  Aligned_cols=175  Identities=12%  Similarity=0.071  Sum_probs=119.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      |+|+||||+|+||++++++|+++|++|+++.|+.+++.+.      .+..+.++.+|++|.+++.++++       .+|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5799999999999999999999999999999988664432      12467889999999988877664       5799


Q ss_pred             EEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHH
Q 022625          167 IICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA  214 (294)
Q Consensus       167 Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~  214 (294)
                      +||+.+.     +                         +.+.+++.+..+||++||..+..+......|..++..  .+.
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~  160 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALS  160 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHH
Confidence            9998221     0                         1222455677899999998877665555555444331  122


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCCCCCcc---eee---ccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQG---FQF---EEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~---~~~---~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      +.....+...|+++++|+||.+.........   ...   .........++++|+|+.++.++.+.
T Consensus       161 ~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        161 ETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence            2233334447999999999998632211100   000   00011234689999999999999864

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.66  E-value=1.1e-14  Score=128.77  Aligned_cols=196  Identities=15%  Similarity=0.120  Sum_probs=127.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc-cchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~-~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      ..+++++||||+|+||++++++|+++|++|++..|.. +.....      .+..+.++.+|+++.+++.++++       
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            3468999999999999999999999999998877643 222111      12356788899999988776654       


Q ss_pred             CCcEEEEcCCc-----h---------------------HHhhhhh--cCCCEEEEecccccccCCCCchhccchhHHHHH
Q 022625          163 GVRSIICPSEG-----F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKLA  214 (294)
Q Consensus       163 ~~d~Vi~~~~~-----~---------------------~~~~~~~--~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~  214 (294)
                      .+|+|||+.+.     +                     +.+++..  ...++||++||..++.+..+...|..++... .
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~-~  162 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAV-I  162 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHHHHH-H
Confidence            56999998321     0                     1111111  1235899999988876665555564443311 1


Q ss_pred             HHHHHHHHh--CCCCEEEEEccceecCCCCCcce--e-----ec-cCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 022625          215 EQDESMLMA--SGIPYTIIRTGVLQNTPGGKQGF--Q-----FE-EGCAANGSLSKEDAAFICVEALESIPQTGLIFEVC  284 (294)
Q Consensus       215 ~~ae~~l~~--~gl~~tivRPg~l~~~~~~~~~~--~-----~~-~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~  284 (294)
                      ..++.+.++  .++.+.+++||.+..........  .     +. .......+++++|+|++++.++..+...+++|++.
T Consensus       163 ~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~  242 (252)
T PRK06077        163 NLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIESITGQVFVLD  242 (252)
T ss_pred             HHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCccccCCCeEEec
Confidence            122222222  37999999999876321110000  0     00 01122357999999999999998776779999999


Q ss_pred             cCCcccccc
Q 022625          285 EISNLCEQL  293 (294)
Q Consensus       285 ~g~~~~~ei  293 (294)
                      +|..---+|
T Consensus       243 ~g~~~~~~~  251 (252)
T PRK06077        243 SGESLKGGI  251 (252)
T ss_pred             CCeeccCCC
Confidence            986554444

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.66  E-value=5.8e-15  Score=132.17  Aligned_cols=189  Identities=16%  Similarity=0.122  Sum_probs=125.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      +.+++++||||+|+||++++++|+++|++|+++.|+.++..+.   .+..+.++.+|++|.++++++++       .+|+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4579999999999999999999999999999999987654332   23468889999999988877665       4699


Q ss_pred             EEEcCCc-----h--------------------H----HhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHH
Q 022625          167 IICPSEG-----F--------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE  215 (294)
Q Consensus       167 Vi~~~~~-----~--------------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~  215 (294)
                      +||+.+.     .                    +    ...++ .+-.+||++||.....+......|..+|..  .+.+
T Consensus        84 lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~  162 (261)
T PRK08265         84 LVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTR  162 (261)
T ss_pred             EEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHH
Confidence            9998321     0                    1    11122 334689999998776555444555444431  1222


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCCC----Ccce---eecc-CCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPGG----KQGF---QFEE-GCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~~----~~~~---~~~~-g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                      .....+...|+++++|+||++......    ....   .+.. ........+.+|+|+++++++..+.  ..|..+.+.+
T Consensus       163 ~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdg  242 (261)
T PRK08265        163 SMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDG  242 (261)
T ss_pred             HHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCccCcEEEECC
Confidence            222333447899999999986522110    0000   0000 0111234578999999999997643  4688888876


Q ss_pred             C
Q 022625          286 I  286 (294)
Q Consensus       286 g  286 (294)
                      |
T Consensus       243 g  243 (261)
T PRK08265        243 G  243 (261)
T ss_pred             C
Confidence            6

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.66  E-value=5.2e-15  Score=132.80  Aligned_cols=166  Identities=16%  Similarity=0.159  Sum_probs=127.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCC--cEEEEcCC-----
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPSE-----  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~--d~Vi~~~~-----  172 (294)
                      |+|||||++|.+|.+|+++|. .+++|+.+.|..               +|++|.+.+.+.++..  |+|||++.     
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD   64 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE---------------LDITDPDAVLEVIRETRPDVVINAAAYTAVD   64 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------ccccChHHHHHHHHhhCCCEEEECccccccc
Confidence            349999999999999999999 779999988776               7999999999999866  99999821     


Q ss_pred             -----------------chHHhhhhhcCCCEEEEecccccccCCC-----------CchhccchhHHHHHHHHHHHHHhC
Q 022625          173 -----------------GFISNAGSLKGVQHVILLSQLSVYRGSG-----------GIQALMKGNARKLAEQDESMLMAS  224 (294)
Q Consensus       173 -----------------~~~~~~~~~~gv~r~V~vSs~~~~~~~~-----------~~~~~~~~~~~~~~~~ae~~l~~~  224 (294)
                                       ..++++|.+.|. ++||+||+.+.....           +...|.     ..|...|..+++.
T Consensus        65 ~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG-----~sKl~GE~~v~~~  138 (281)
T COG1091          65 KAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYG-----RSKLAGEEAVRAA  138 (281)
T ss_pred             cccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhh-----HHHHHHHHHHHHh
Confidence                             116667888885 799999998854322           222232     2356789999999


Q ss_pred             CCCEEEEEccceecCCCCCc-----------ceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCc
Q 022625          225 GIPYTIIRTGVLQNTPGGKQ-----------GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISN  288 (294)
Q Consensus       225 gl~~tivRPg~l~~~~~~~~-----------~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~  288 (294)
                      +-++.|||.++++...+..+           .......++..++++.+|+|+++.+++..... +.+|++++...
T Consensus       139 ~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~-~~~yH~~~~g~  212 (281)
T COG1091         139 GPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKE-GGVYHLVNSGE  212 (281)
T ss_pred             CCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhcccc-CcEEEEeCCCc
Confidence            89999999999985544211           12223456678899999999999998877544 34999999765

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.65  E-value=1e-14  Score=133.11  Aligned_cols=176  Identities=15%  Similarity=0.111  Sum_probs=119.3

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc-----
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      .....+++++||||+|+||++++++|+++|++|++++|+.+++.+..      +..+.++.+|++|.+++.++++     
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34556799999999999999999999999999999999986644321      2356789999999998888776     


Q ss_pred             --CCcEEEEcCCc------------h--------------------HHhhhhhcCCCEEEEecccccccC-CCCchhccc
Q 022625          163 --GVRSIICPSEG------------F--------------------ISNAGSLKGVQHVILLSQLSVYRG-SGGIQALMK  207 (294)
Q Consensus       163 --~~d~Vi~~~~~------------~--------------------~~~~~~~~gv~r~V~vSs~~~~~~-~~~~~~~~~  207 (294)
                        .+|++||+++.            +                    +...+++.+..+||++||.++... ......|..
T Consensus       115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~a  194 (293)
T PRK05866        115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNA  194 (293)
T ss_pred             cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHH
Confidence              67999998321            0                    111234566789999999765532 233334433


Q ss_pred             hhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          208 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       208 ~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      +|..  .+.+.....+...++++++|+||.+...... ....    ......++++++|+.++.++.+.
T Consensus       195 sKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~-~~~~----~~~~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        195 SKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA-PTKA----YDGLPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccc-cccc----ccCCCCCCHHHHHHHHHHHHhcC
Confidence            3321  1122223334457999999999976522211 1000    11123579999999999999864

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.65  E-value=1.7e-14  Score=128.08  Aligned_cols=190  Identities=15%  Similarity=0.113  Sum_probs=122.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhh------hcCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~------~~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      .|+++||||+|+||++++++|+++|++|+++.|+... ...      .....+.++.+|++|.+++.++++       .+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            4789999999999999999999999999999986532 111      122368899999999988776654       56


Q ss_pred             cEEEEcCCc-------h---------------------HHhh----hhhc-C-----CCEEEEecccccccCCCCchhcc
Q 022625          165 RSIICPSEG-------F---------------------ISNA----GSLK-G-----VQHVILLSQLSVYRGSGGIQALM  206 (294)
Q Consensus       165 d~Vi~~~~~-------~---------------------~~~~----~~~~-g-----v~r~V~vSs~~~~~~~~~~~~~~  206 (294)
                      |++||+.+.       +                     +.++    +.+. +     +.+||++||..+..+......|.
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            999998320       0                     1111    1111 1     57899999987765554445554


Q ss_pred             chhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCccee----eccC-CCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          207 KGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ----FEEG-CAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       207 ~~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~----~~~g-~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                      .+|...  +.+.....+...|+++++||||.+...........    +..+ .....+.+++|+++++..++....  ..
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~~  241 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAALASGDLPYST  241 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCcccccC
Confidence            444321  12222233345789999999998763211100000    0011 112345689999999998886532  46


Q ss_pred             CcEEEEecCCc
Q 022625          278 GLIFEVCEISN  288 (294)
Q Consensus       278 g~~~~v~~g~~  288 (294)
                      |++|++.++..
T Consensus       242 G~~~~i~gg~~  252 (256)
T PRK12745        242 GQAIHVDGGLS  252 (256)
T ss_pred             CCEEEECCCee
Confidence            89999988743

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.65  E-value=7.2e-15  Score=129.79  Aligned_cols=170  Identities=14%  Similarity=0.107  Sum_probs=117.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-------CCCcEEeecCCCCHHHHHHHhcC----CcEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GTYVESMAGDASNKKFLKTALRG----VRSI  167 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~v~~v~~D~~d~~~l~~~l~~----~d~V  167 (294)
                      +|+++||||+|+||.+++++|+++|++|++++|++++.....       ..+++++.+|++|.++++++++.    +|++
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v   80 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV   80 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence            479999999999999999999999999999999987543321       23688999999999888877654    5999


Q ss_pred             EEcCCch------------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHH
Q 022625          168 ICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE  215 (294)
Q Consensus       168 i~~~~~~------------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~  215 (294)
                      ||+.+..                              +...+.+.+.++||++||.....+......|..+|..  .+.+
T Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  160 (243)
T PRK07102         81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLS  160 (243)
T ss_pred             EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHHH
Confidence            9972210                              1112334567899999998765544444445443321  1222


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      .....+...|+++++|+||.+........      .......++++|+|+.+++.+.++
T Consensus       161 ~l~~el~~~gi~v~~v~pg~v~t~~~~~~------~~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        161 GLRNRLFKSGVHVLTVKPGFVRTPMTAGL------KLPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHhhccCcEEEEEecCcccChhhhcc------CCCccccCCHHHHHHHHHHHHhCC
Confidence            22233456799999999999873321111      011234678999999999999864

>PRK08017 oxidoreductase; Provisional

Probab=99.65  E-value=4.9e-15  Score=131.57  Aligned_cols=178  Identities=18%  Similarity=0.131  Sum_probs=119.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--------CCcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--------GVRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--------~~d~Vi~~  170 (294)
                      .++++||||+|+||+++++.|+++|++|+++.|+.++.......+++.+.+|++|.+++.++++        .+|.+||+
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            3689999999999999999999999999999999877654443468889999999988766553        34788887


Q ss_pred             CC-----ch-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HHHHHH
Q 022625          171 SE-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDE  218 (294)
Q Consensus       171 ~~-----~~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~ae  218 (294)
                      .+     .+                         +.+.+++.+.+++|++||..+..+......|..++...  +.+...
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~l~  161 (256)
T PRK08017         82 AGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALR  161 (256)
T ss_pred             CCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHHHH
Confidence            22     00                         13345566778999999986665544444554433211  112222


Q ss_pred             HHHHhCCCCEEEEEccceecCCCC-----C-cceeeccCCCCCCCcCHHHHHHHHHHHhhCCCC
Q 022625          219 SMLMASGIPYTIIRTGVLQNTPGG-----K-QGFQFEEGCAANGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       219 ~~l~~~gl~~tivRPg~l~~~~~~-----~-~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      .++...+++++++|||.+......     . .......+.....+++++|++++++.+++++..
T Consensus       162 ~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~  225 (256)
T PRK08017        162 MELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKP  225 (256)
T ss_pred             HHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence            334557899999999986522110     0 000111122223568999999999999987653

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.65  E-value=1.2e-14  Score=129.25  Aligned_cols=193  Identities=13%  Similarity=0.074  Sum_probs=128.0

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|++++..+..      +..+..+.+|++|.+++.++++       
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG   85 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            356899999999999999999999999999999999876543321      2356788899999988877664       


Q ss_pred             CCcEEEEcCCc-----h---------------------H----HhhhhhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          163 GVRSIICPSEG-----F---------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       163 ~~d~Vi~~~~~-----~---------------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      .+|++||+.+.     +                     +    ...+...+..+||++||.....+......|..+|.. 
T Consensus        86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  165 (254)
T PRK08085         86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAV  165 (254)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHH
Confidence            46999998321     0                     1    112233456799999998765544444455444431 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCC----cce-ee-ccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEE
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF-QF-EEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE  282 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----~~~-~~-~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~  282 (294)
                       .+.+.....+...|+++++|+||++.......    ... .+ ........+.+.+|+|.++.+++....  ..|.+..
T Consensus       166 ~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~  245 (254)
T PRK08085        166 KMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLF  245 (254)
T ss_pred             HHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEE
Confidence             12222333344579999999999876332110    000 01 011122345689999999999887543  4688888


Q ss_pred             EecCCc
Q 022625          283 VCEISN  288 (294)
Q Consensus       283 v~~g~~  288 (294)
                      +.+|..
T Consensus       246 ~dgg~~  251 (254)
T PRK08085        246 VDGGML  251 (254)
T ss_pred             ECCCee
Confidence            877643

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.65  E-value=1.1e-14  Score=129.77  Aligned_cols=191  Identities=13%  Similarity=0.121  Sum_probs=126.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhh---hcCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME---SFGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~---~~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      .+.+|+++||||+++||++++++|+++|++|+++.|+... ..+   ..+.++.++.+|++|.+++.++++       .+
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI   84 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence            3568999999999999999999999999999999886532 111   123467889999999988887765       46


Q ss_pred             cEEEEcCCc-------------h-----------------HHhhhhhcC-CCEEEEecccccccCCCCchhccchhHH--
Q 022625          165 RSIICPSEG-------------F-----------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       165 d~Vi~~~~~-------------~-----------------~~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      |++||+.+.             +                 +...+.+.+ -.+||++||...+.+......|..+|..  
T Consensus        85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~  164 (251)
T PRK12481         85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVM  164 (251)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHH
Confidence            999998321             0                 111223333 3699999998776654444455444431  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc---ce---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ---GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~---~~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                      .+.+.....+...|++++.|+||.+........   ..   .+........+..++|+|.++++++....  ..|+.+.+
T Consensus       165 ~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~G~~i~v  244 (251)
T PRK12481        165 GLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGYTLAV  244 (251)
T ss_pred             HHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCceEEE
Confidence            122333334456799999999999763211100   00   00011112345789999999999987543  56788888


Q ss_pred             ecC
Q 022625          284 CEI  286 (294)
Q Consensus       284 ~~g  286 (294)
                      .+|
T Consensus       245 dgg  247 (251)
T PRK12481        245 DGG  247 (251)
T ss_pred             CCC
Confidence            665

>PRK06398 aldose dehydrogenase; Validated

Probab=99.65  E-value=1.2e-14  Score=129.94  Aligned_cols=186  Identities=12%  Similarity=0.085  Sum_probs=124.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-------CCcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi~  169 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+....     ..++++.+|++|.+++.++++       .+|++||
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~   78 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN   78 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5679999999999999999999999999999999987543     257889999999988877664       5799999


Q ss_pred             cCCc-------------h-------------H----HhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HHHHH
Q 022625          170 PSEG-------------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD  217 (294)
Q Consensus       170 ~~~~-------------~-------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~a  217 (294)
                      +++.             +             +    ...+++.+..+||++||..+..+......|..+|..-  +.+..
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~l  158 (258)
T PRK06398         79 NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSI  158 (258)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHHH
Confidence            7220             0             1    1123345668999999988776655555665544321  11111


Q ss_pred             HHHHHhCCCCEEEEEccceecCCCCC--------cce-------eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          218 ESMLMASGIPYTIIRTGVLQNTPGGK--------QGF-------QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       218 e~~l~~~gl~~tivRPg~l~~~~~~~--------~~~-------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      ...+. ..++++.|+||.+.......        ...       .+...........++|+|+++++++....  ..|..
T Consensus       159 a~e~~-~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~  237 (258)
T PRK06398        159 AVDYA-PTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGEC  237 (258)
T ss_pred             HHHhC-CCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcccCCCCCcE
Confidence            11122 34999999999875221100        000       00011112334589999999999887543  47888


Q ss_pred             EEEecCCc
Q 022625          281 FEVCEISN  288 (294)
Q Consensus       281 ~~v~~g~~  288 (294)
                      +.+.+|..
T Consensus       238 i~~dgg~~  245 (258)
T PRK06398        238 VTVDGGLR  245 (258)
T ss_pred             EEECCccc
Confidence            88887743

>PRK08264 short chain dehydrogenase; Validated

Probab=99.65  E-value=1.3e-14  Score=127.61  Aligned_cols=168  Identities=15%  Similarity=0.192  Sum_probs=118.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcC---CcEEEEcCC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG---VRSIICPSE  172 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~---~d~Vi~~~~  172 (294)
                      ..+++++||||+|+||++++++|+++|+ +|+++.|+.++..+ ....++++.+|+.|.+++.++++.   +|+|||+.+
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   82 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG   82 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            4578999999999999999999999999 99999999877654 445788999999999998887764   699999832


Q ss_pred             c------h---------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHHH--HHHHHHH
Q 022625          173 G------F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDES  219 (294)
Q Consensus       173 ~------~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~ae~  219 (294)
                      .      +                     +.+    .++..+..+||++||...+.+......|...+...  +.+....
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~  162 (238)
T PRK08264         83 IFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRA  162 (238)
T ss_pred             cCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHHHHH
Confidence            1      0                     111    13345678999999987766555555554443221  1112222


Q ss_pred             HHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          220 MLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       220 ~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      .+...+++++++|||.+.......         .....++.+|+++.++..+...
T Consensus       163 ~~~~~~i~~~~v~pg~v~t~~~~~---------~~~~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        163 ELAPQGTRVLGVHPGPIDTDMAAG---------LDAPKASPADVARQILDALEAG  208 (238)
T ss_pred             HhhhcCeEEEEEeCCccccccccc---------CCcCCCCHHHHHHHHHHHHhCC
Confidence            233468999999999886322111         1112688899999999888753

>PRK08324 short chain dehydrogenase; Validated

Probab=99.65  E-value=6.3e-15  Score=149.15  Aligned_cols=193  Identities=17%  Similarity=0.173  Sum_probs=131.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---C--CCcEEeecCCCCHHHHHHHhc-------C
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G--TYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~--~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      ...+++++||||+|+||+.++++|+++|++|++++|+.++.....   .  ..+.++.+|++|.+++.++++       +
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~  498 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGG  498 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            346799999999999999999999999999999999987644321   2  267889999999988877765       5


Q ss_pred             CcEEEEcCCc-------------h-------------H----HhhhhhcCC-CEEEEecccccccCCCCchhccchhHHH
Q 022625          164 VRSIICPSEG-------------F-------------I----SNAGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNARK  212 (294)
Q Consensus       164 ~d~Vi~~~~~-------------~-------------~----~~~~~~~gv-~r~V~vSs~~~~~~~~~~~~~~~~~~~~  212 (294)
                      +|+|||+++.             +             +    ...+++.+. .+||++||..+..+..+...|..+|...
T Consensus       499 iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~  578 (681)
T PRK08324        499 VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAE  578 (681)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHH
Confidence            7999998330             0             1    122344454 7999999987766555555554443321


Q ss_pred             --HHHHHHHHHHhCCCCEEEEEccceecCCC--CCc---------ce-------eeccCCCCCCCcCHHHHHHHHHHHhh
Q 022625          213 --LAEQDESMLMASGIPYTIIRTGVLQNTPG--GKQ---------GF-------QFEEGCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       213 --~~~~ae~~l~~~gl~~tivRPg~l~~~~~--~~~---------~~-------~~~~g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                        +.+.....+...|+++++|+|+.++.+.+  ...         +.       .+..+.....+++.+|+|++++.++.
T Consensus       579 ~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s  658 (681)
T PRK08324        579 LHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLAS  658 (681)
T ss_pred             HHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhC
Confidence              11111111223679999999999852211  000         00       12223344567999999999999884


Q ss_pred             --CCCCCCcEEEEecCCc
Q 022625          273 --SIPQTGLIFEVCEISN  288 (294)
Q Consensus       273 --~~~~~g~~~~v~~g~~  288 (294)
                        .....|.+|++.+|..
T Consensus       659 ~~~~~~tG~~i~vdgG~~  676 (681)
T PRK08324        659 GLLSKTTGAIITVDGGNA  676 (681)
T ss_pred             ccccCCcCCEEEECCCch
Confidence              3345789999988753

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.65  E-value=1.9e-14  Score=129.73  Aligned_cols=194  Identities=14%  Similarity=0.130  Sum_probs=129.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.+......      +.++.++.+|++|.+++.++++       
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            346799999999999999999999999999999999876543221      2357889999999988876654       


Q ss_pred             CCcEEEEcCCc--------------------h-------------------------HHhhhhhcCCCEEEEeccccccc
Q 022625          163 GVRSIICPSEG--------------------F-------------------------ISNAGSLKGVQHVILLSQLSVYR  197 (294)
Q Consensus       163 ~~d~Vi~~~~~--------------------~-------------------------~~~~~~~~gv~r~V~vSs~~~~~  197 (294)
                      .+|++||+++.                    +                         +...+.+.+..+||++||..++.
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~  166 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT  166 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence            57999998320                    0                         11123445567999999998877


Q ss_pred             CCCCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-----ce------eeccCCCCCCCcCHHHHH
Q 022625          198 GSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-----GF------QFEEGCAANGSLSKEDAA  264 (294)
Q Consensus       198 ~~~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-----~~------~~~~g~~~~~~Is~eDvA  264 (294)
                      +......|..+|..  .+.+.....+...|++++.|+||.+........     ..      .+........+...+|+|
T Consensus       167 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva  246 (278)
T PRK08277        167 PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELL  246 (278)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHHH
Confidence            66555556444431  122222223344689999999998763211100     00      000111223345799999


Q ss_pred             HHHHHHhhC-CC--CCCcEEEEecCCcc
Q 022625          265 FICVEALES-IP--QTGLIFEVCEISNL  289 (294)
Q Consensus       265 ~~iv~aL~~-~~--~~g~~~~v~~g~~~  289 (294)
                      +++++++.. ..  ..|..+.+.+|-..
T Consensus       247 ~~~~~l~s~~~~~~~tG~~i~vdgG~~~  274 (278)
T PRK08277        247 GTLLWLADEKASSFVTGVVLPVDGGFSA  274 (278)
T ss_pred             HHHHHHcCccccCCcCCCEEEECCCeec
Confidence            999998876 33  46889988877543

>PRK09135 pteridine reductase; Provisional

Probab=99.64  E-value=1.7e-14  Score=127.12  Aligned_cols=189  Identities=15%  Similarity=0.133  Sum_probs=119.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhh-------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME-------SFGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~-------~~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+++|+||||+|+||++++++|+++|++|+++.|+..+ ...       ..+..+.++.+|++|.+++.++++       
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45899999999999999999999999999999986432 211       112357889999999998888776       


Q ss_pred             CCcEEEEcCCc-----h---------------------HHhhhhh---cCCCEEEEecccccccCCCCchhccchhHHHH
Q 022625          163 GVRSIICPSEG-----F---------------------ISNAGSL---KGVQHVILLSQLSVYRGSGGIQALMKGNARKL  213 (294)
Q Consensus       163 ~~d~Vi~~~~~-----~---------------------~~~~~~~---~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~  213 (294)
                      .+|+|||+++.     +                     +.+++..   ..-.+++++++.....+..+...|..+|....
T Consensus        85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~  164 (249)
T PRK09135         85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALE  164 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHHHHH
Confidence            46999998321     0                     1222211   12246777777655555444455544433111


Q ss_pred             HHHHHHHHHh--CCCCEEEEEccceecCCCCCccee------eccCCCCCCCcCHHHHHHHHHHHhhCC-CCCCcEEEEe
Q 022625          214 AEQDESMLMA--SGIPYTIIRTGVLQNTPGGKQGFQ------FEEGCAANGSLSKEDAAFICVEALESI-PQTGLIFEVC  284 (294)
Q Consensus       214 ~~~ae~~l~~--~gl~~tivRPg~l~~~~~~~~~~~------~~~g~~~~~~Is~eDvA~~iv~aL~~~-~~~g~~~~v~  284 (294)
                       ..+..+..+  .+++++++|||.++ ++.....+.      ...+.......+++|+|+++..++... ...|++|++.
T Consensus       165 -~~~~~l~~~~~~~i~~~~v~pg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~g~~~~i~  242 (249)
T PRK09135        165 -MLTRSLALELAPEVRVNAVAPGAIL-WPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLADASFITGQILAVD  242 (249)
T ss_pred             -HHHHHHHHHHCCCCeEEEEEecccc-CccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCccccccCcEEEEC
Confidence             111111112  36999999999887 333211110      001112223357899999997766543 3578999999


Q ss_pred             cCCc
Q 022625          285 EISN  288 (294)
Q Consensus       285 ~g~~  288 (294)
                      +|..
T Consensus       243 ~g~~  246 (249)
T PRK09135        243 GGRS  246 (249)
T ss_pred             CCee
Confidence            9864

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.9e-14  Score=128.07  Aligned_cols=192  Identities=17%  Similarity=0.122  Sum_probs=124.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch-hhh------cCCCcEEeecCCCCHHHHHHHhcC-----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MES------FGTYVESMAGDASNKKFLKTALRG-----  163 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~-~~~------~~~~v~~v~~D~~d~~~l~~~l~~-----  163 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.++. .+.      .+..+..+.+|++|.+++.++++.     
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   84 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL   84 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35679999999999999999999999999999999976431 111      123577899999999888776653     


Q ss_pred             --CcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCC--chhccchh
Q 022625          164 --VRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGG--IQALMKGN  209 (294)
Q Consensus       164 --~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~~~~~~~  209 (294)
                        .|++||+.+.     +                         +...+.+.+..+||++||.........  ...|..+|
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK  164 (254)
T PRK06114         85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASK  164 (254)
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHH
Confidence              5999998321     0                         111234455679999999876533221  23443333


Q ss_pred             HH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce-----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          210 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF-----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       210 ~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~-----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      ..  .+.+.....+...|+++++|+||.+..........     .+...........++|+|..+++++.+..  ..|++
T Consensus       165 aa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~tG~~  244 (254)
T PRK06114        165 AGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASFCTGVD  244 (254)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCce
Confidence            21  12222223344578999999999875322111100     01111122345678999999999887643  46888


Q ss_pred             EEEecCC
Q 022625          281 FEVCEIS  287 (294)
Q Consensus       281 ~~v~~g~  287 (294)
                      +.+.+|-
T Consensus       245 i~~dgg~  251 (254)
T PRK06114        245 LLVDGGF  251 (254)
T ss_pred             EEECcCE
Confidence            8887764

>PRK06128 oxidoreductase; Provisional

Probab=99.64  E-value=2.4e-14  Score=130.95  Aligned_cols=192  Identities=16%  Similarity=0.162  Sum_probs=127.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc--hhh---h---cCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AME---S---FGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~--~~~---~---~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      .+.+|++|||||+|+||++++++|+++|++|++..++.+.  ..+   .   .+..+.++.+|++|.++++++++     
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            4567999999999999999999999999999988775432  111   1   23457789999999988877664     


Q ss_pred             --CCcEEEEcCCc------h---------------------HHhhhhh--cCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 --GVRSIICPSEG------F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 --~~d~Vi~~~~~------~---------------------~~~~~~~--~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                        ++|++||+.+.      +                     +.+++..  ..-.+||++||..++.+......|..+|..
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a  211 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAA  211 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHHH
Confidence              57999998321      0                     1112221  122589999999887766555566544431


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc---e---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---F---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~---~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                        .+.+.....+...|+++++|+||.+.........   .   .+..........+.+|+|.++++++....  ..|++|
T Consensus       212 ~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G~~~  291 (300)
T PRK06128        212 IVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTGEVF  291 (300)
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCccCcEE
Confidence              1222233334457999999999997632111100   0   11122223345689999999999887644  368999


Q ss_pred             EEecCC
Q 022625          282 EVCEIS  287 (294)
Q Consensus       282 ~v~~g~  287 (294)
                      ++.+|.
T Consensus       292 ~v~gg~  297 (300)
T PRK06128        292 GVTGGL  297 (300)
T ss_pred             eeCCCE
Confidence            998874

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.1e-14  Score=129.40  Aligned_cols=190  Identities=15%  Similarity=0.183  Sum_probs=124.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcC-------CcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~-------~d~Vi~  169 (294)
                      ..+|+++||||+|+||++++++|+++|++|++++|+.++  ...+..++++.+|++|.++++++++.       +|+|||
T Consensus         4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   81 (252)
T PRK07856          4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN   81 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            467999999999999999999999999999999998765  12234688999999999888877654       499999


Q ss_pred             cCCc-----h---------------------HHhh----hhh-cCCCEEEEecccccccCCCCchhccchhHHHHHHHHH
Q 022625          170 PSEG-----F---------------------ISNA----GSL-KGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE  218 (294)
Q Consensus       170 ~~~~-----~---------------------~~~~----~~~-~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae  218 (294)
                      +.+.     +                     +.+.    +.+ .+..+||++||.....+......|..+|... ...++
T Consensus        82 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~-~~l~~  160 (252)
T PRK07856         82 NAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGL-LNLTR  160 (252)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHH-HHHHH
Confidence            7321     0                     1111    222 2447899999988776555555554443311 11112


Q ss_pred             HHHHh--CCCCEEEEEccceecCCCCC-----cce-eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          219 SMLMA--SGIPYTIIRTGVLQNTPGGK-----QGF-QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       219 ~~l~~--~gl~~tivRPg~l~~~~~~~-----~~~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      .+..+  ..++++.|+||.+.......     ... .+..........+++|+|+.+++++..+.  ..|..+.+.+|..
T Consensus       161 ~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~~  240 (252)
T PRK07856        161 SLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSGANLEVHGGGE  240 (252)
T ss_pred             HHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCCEEEECCCcc
Confidence            21111  23899999999875221110     000 01111122345689999999999887643  4789999987754


Q ss_pred             c
Q 022625          289 L  289 (294)
Q Consensus       289 ~  289 (294)
                      .
T Consensus       241 ~  241 (252)
T PRK07856        241 R  241 (252)
T ss_pred             h
Confidence            3

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.64  E-value=1.9e-14  Score=128.10  Aligned_cols=191  Identities=15%  Similarity=0.093  Sum_probs=124.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchh-hhcCCCcEEeecCCCCHHHHHHHhc-------CCcEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALR-------GVRSII  168 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi  168 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+.+... .....++.++.+|++|.+++.++++       .+|++|
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45799999999999999999999999999998877654322 2222357889999999998887765       469999


Q ss_pred             EcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccC-CCCchhccchhHH--HHHH
Q 022625          169 CPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRG-SGGIQALMKGNAR--KLAE  215 (294)
Q Consensus       169 ~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~-~~~~~~~~~~~~~--~~~~  215 (294)
                      |+.+.     +                         +...+++.+..+||++||..++.+ ......|..+|..  .+.+
T Consensus        85 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~  164 (255)
T PRK06463         85 NNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTR  164 (255)
T ss_pred             ECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHH
Confidence            98321     0                         112234455679999999876642 2233345433321  1222


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCCCC--cce-------eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPGGK--QGF-------QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~~~--~~~-------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                      .....+...|+++++|+||++.......  ...       .+..........+++|+|+++++++..+.  ..|..+.+.
T Consensus       165 ~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~d  244 (255)
T PRK06463        165 RLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYITGQVIVAD  244 (255)
T ss_pred             HHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCCCCCEEEEC
Confidence            2222334478999999999875322110  000       00011122335689999999999987654  468899887


Q ss_pred             cCC
Q 022625          285 EIS  287 (294)
Q Consensus       285 ~g~  287 (294)
                      +|.
T Consensus       245 gg~  247 (255)
T PRK06463        245 GGR  247 (255)
T ss_pred             CCe
Confidence            764

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.5e-14  Score=134.48  Aligned_cols=185  Identities=11%  Similarity=0.075  Sum_probs=123.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +.+++|+||||+|+||++++++|+++|++|+++.|+++++.+.      .+..+.++.+|++|.++++++++       .
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~   85 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP   85 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            4578999999999999999999999999999999988764432      13467889999999998887754       5


Q ss_pred             CcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          164 VRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       164 ~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      +|++||+.+.     +                         +...+++.+..+||++||..++.+......|..+|..  
T Consensus        86 iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~  165 (334)
T PRK07109         86 IDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIR  165 (334)
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHH
Confidence            7999998321     0                         1223445566899999999887665555556444431  


Q ss_pred             HHHHHHHHHHH--hCCCCEEEEEccceecCCCCCcceeecc-CCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 022625          212 KLAEQDESMLM--ASGIPYTIIRTGVLQNTPGGKQGFQFEE-GCAANGSLSKEDAAFICVEALESIPQTGLIFEVC  284 (294)
Q Consensus       212 ~~~~~ae~~l~--~~gl~~tivRPg~l~~~~~~~~~~~~~~-g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~  284 (294)
                      .+.+.....+.  ..++.+++|+||.+.............. ........+++|+|+++++++.++   .+.+.+.
T Consensus       166 ~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~i~~~~~~~---~~~~~vg  238 (334)
T PRK07109        166 GFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVEPQPVPPIYQPEVVADAILYAAEHP---RRELWVG  238 (334)
T ss_pred             HHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhccccccCCCCCCCHHHHHHHHHHHHhCC---CcEEEeC
Confidence            12222222222  2579999999998762211100000111 111234578999999999999875   3445543

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.64  E-value=1.2e-14  Score=127.68  Aligned_cols=187  Identities=13%  Similarity=0.110  Sum_probs=121.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---C--CCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G--TYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~--~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      +.+++|+||||+|+||..+++.|+++|++|++++|++++.....   .  .+++++.+|+++.++++++++       .+
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            45789999999999999999999999999999999887653321   1  257889999999988876654       35


Q ss_pred             cEEEEcCCch----------------------------HHhhhhhcCCCEEEEecccccc-cCCCCchhccchhHHH--H
Q 022625          165 RSIICPSEGF----------------------------ISNAGSLKGVQHVILLSQLSVY-RGSGGIQALMKGNARK--L  213 (294)
Q Consensus       165 d~Vi~~~~~~----------------------------~~~~~~~~gv~r~V~vSs~~~~-~~~~~~~~~~~~~~~~--~  213 (294)
                      |.+|++.+..                            +...++  .-.+||++||.... .+......|..++...  +
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~  160 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLK--EGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKA  160 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHh--cCCEEEEEecchhcccCCCCchHHHHHHHHHHHH
Confidence            8999873311                            001111  12589999987653 2333333454444311  1


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      .+.....+...++++++||||++.+.......... ........++.+|+++++++++..+.  ..|+.+.+.++
T Consensus       161 ~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~~~-~~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~~  234 (238)
T PRK05786        161 VEILASELLGRGIRVNGIAPTTISGDFEPERNWKK-LRKLGDDMAPPEDFAKVIIWLLTDEADWVDGVVIPVDGG  234 (238)
T ss_pred             HHHHHHHHhhcCeEEEEEecCccCCCCCchhhhhh-hccccCCCCCHHHHHHHHHHHhcccccCccCCEEEECCc
Confidence            12222333457999999999998743211110000 00112246899999999999997654  36777777543

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.64  E-value=1.7e-14  Score=129.31  Aligned_cols=192  Identities=14%  Similarity=0.070  Sum_probs=129.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      ...+|+++||||+++||++++++|+++|++|+++.|++++..+.      .+.++.++.+|++|.++++++++       
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG   86 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            44679999999999999999999999999999999987654332      12368889999999999887775       


Q ss_pred             CCcEEEEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          163 GVRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       163 ~~d~Vi~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      .+|++||+.+.             +                 +...+++.+..+||++||.....+......|..++.. 
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal  166 (265)
T PRK07097         87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGL  166 (265)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHH
Confidence            36999998321             0                 1122344567899999997665444444555444431 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCC-c-------ceee----ccCCCCCCCcCHHHHHHHHHHHhhCCC--C
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-Q-------GFQF----EEGCAANGSLSKEDAAFICVEALESIP--Q  276 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-~-------~~~~----~~g~~~~~~Is~eDvA~~iv~aL~~~~--~  276 (294)
                       .+.+.....+...|++++.|+||.+....... .       ...+    ........+...+|+|..++.++....  .
T Consensus       167 ~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  246 (265)
T PRK07097        167 KMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASNFV  246 (265)
T ss_pred             HHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCcccCCC
Confidence             12223333344579999999999986321100 0       0000    001112345678999999999997643  4


Q ss_pred             CCcEEEEecCC
Q 022625          277 TGLIFEVCEIS  287 (294)
Q Consensus       277 ~g~~~~v~~g~  287 (294)
                      .|+.+.+.+|.
T Consensus       247 ~g~~~~~~gg~  257 (265)
T PRK07097        247 NGHILYVDGGI  257 (265)
T ss_pred             CCCEEEECCCc
Confidence            68888887764

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.4e-14  Score=128.58  Aligned_cols=192  Identities=10%  Similarity=0.048  Sum_probs=126.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+.+++++||||+|+||.+++++|+++|++|+++.|+.++.....      +..++++.+|++|.+++.++++       
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG   84 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            456799999999999999999999999999999999876543321      2357788999999988776654       


Q ss_pred             CCcEEEEcCCc--------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 GVRSIICPSEG--------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 ~~d~Vi~~~~~--------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      .+|++||+.+.              +                 +.+.+++.+..++|++||.....+..+...|..+|..
T Consensus        85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  164 (252)
T PRK07035         85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAA  164 (252)
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHH
Confidence            46999997321              0                 1122345567899999998766554444455443321


Q ss_pred             H--HHHHHHHHHHhCCCCEEEEEccceecCCCCCc----ce--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       212 ~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                      .  +.+.....+...|++++.|+||.+........    ..  ............+++|+|+.+.+++.+..  ..|+++
T Consensus       165 l~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~  244 (252)
T PRK07035        165 VISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECL  244 (252)
T ss_pred             HHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccCCEE
Confidence            1  11122222334689999999998763221100    00  00011122345689999999999887654  468888


Q ss_pred             EEecCC
Q 022625          282 EVCEIS  287 (294)
Q Consensus       282 ~v~~g~  287 (294)
                      .+.+|-
T Consensus       245 ~~dgg~  250 (252)
T PRK07035        245 NVDGGY  250 (252)
T ss_pred             EeCCCc
Confidence            887663

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2e-14  Score=127.76  Aligned_cols=191  Identities=14%  Similarity=0.084  Sum_probs=125.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      ..+|+++||||+|+||++++++|+++|++|+++.|+.+++.+..      +.++.++.+|++|.+++.++++       .
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG   86 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            46799999999999999999999999999999999876543321      2357788999999988877664       6


Q ss_pred             CcEEEEcCCc-----h---------------------HHh----hhhhcC-CCEEEEecccccccC--CCCchhccchhH
Q 022625          164 VRSIICPSEG-----F---------------------ISN----AGSLKG-VQHVILLSQLSVYRG--SGGIQALMKGNA  210 (294)
Q Consensus       164 ~d~Vi~~~~~-----~---------------------~~~----~~~~~g-v~r~V~vSs~~~~~~--~~~~~~~~~~~~  210 (294)
                      +|++||+.+.     +                     +..    .+.+.+ -.++|++||..+...  ......|..+|.
T Consensus        87 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKa  166 (253)
T PRK05867         87 IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKA  166 (253)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHH
Confidence            7999998221     0                     111    122332 357999998765422  122334544432


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-c--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                      .  .+.+.....+...|++++.|+||.+........ .  ..+........+.+++|+|+++++++....  ..|+++.+
T Consensus       167 al~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~v  246 (253)
T PRK05867        167 AVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTGSDIVI  246 (253)
T ss_pred             HHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcCCCeEEE
Confidence            1  122233333445799999999999863221110 0  011111222446789999999999887543  46888988


Q ss_pred             ecCC
Q 022625          284 CEIS  287 (294)
Q Consensus       284 ~~g~  287 (294)
                      .+|.
T Consensus       247 dgG~  250 (253)
T PRK05867        247 DGGY  250 (253)
T ss_pred             CCCc
Confidence            7763

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.64  E-value=6.1e-15  Score=131.55  Aligned_cols=176  Identities=15%  Similarity=0.053  Sum_probs=116.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc----CCCcEEeecCCCCHHHHHHHhc--------CCcE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF----GTYVESMAGDASNKKFLKTALR--------GVRS  166 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~v~~v~~D~~d~~~l~~~l~--------~~d~  166 (294)
                      +|+++||||+|+||++++++|+++|++|+++.|++++..+..    +..++++.+|++|.+++.++++        .+|+
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            478999999999999999999999999999999987654332    2468899999999988877654        4599


Q ss_pred             EEEcCCc-----h---------------------HH----hhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HH
Q 022625          167 IICPSEG-----F---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA  214 (294)
Q Consensus       167 Vi~~~~~-----~---------------------~~----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~  214 (294)
                      |||+++.     +                     +.    ..++..+..+||++||..+..+......|..++...  +.
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~  160 (260)
T PRK08267         81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLT  160 (260)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHHH
Confidence            9998321     0                     11    122344568999999986655444444554433311  11


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCCCCC--cceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTPGGK--QGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~~~~--~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      +.....+...++++++|+||.+.......  .......-......++.+|+|+++++++..+
T Consensus       161 ~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        161 EALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             HHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHHHhCC
Confidence            22222234468999999999976432211  0000000011223478899999999999654

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1e-14  Score=129.51  Aligned_cols=192  Identities=13%  Similarity=0.063  Sum_probs=128.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+.++..+.      .+..++++.+|++|.+++.++++       .
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4579999999999999999999999999999999987654322      12368889999999988877665       3


Q ss_pred             CcEEEEcCC-----c-h---------------------H----HhhhhhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          164 VRSIICPSE-----G-F---------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       164 ~d~Vi~~~~-----~-~---------------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      +|++||+.+     . +                     +    ...+.+.+..++|++||..+..+......|..+|.. 
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~  164 (253)
T PRK06172         85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAV  164 (253)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHH
Confidence            599999822     1 1                     0    111234456799999998877665555555444431 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCC----cce---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----~~~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                       .+.+.....+...|++++.|+||.+.......    ...   .+..........+++|+|+.+++++.+..  ..|+.+
T Consensus       165 ~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i  244 (253)
T PRK06172        165 IGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHAL  244 (253)
T ss_pred             HHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcCCcEE
Confidence             11222222233468999999999875221110    000   00011122345689999999999987643  478999


Q ss_pred             EEecCCc
Q 022625          282 EVCEISN  288 (294)
Q Consensus       282 ~v~~g~~  288 (294)
                      .+.+|..
T Consensus       245 ~~dgg~~  251 (253)
T PRK06172        245 MVDGGAT  251 (253)
T ss_pred             EECCCcc
Confidence            9888753

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.63  E-value=2.4e-14  Score=126.07  Aligned_cols=189  Identities=17%  Similarity=0.110  Sum_probs=126.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhhh------cCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES------FGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      .++++||||+|+||++++++|+++|++|+++.|+... ..+.      .+..+.++.+|++|.+++.++++       .+
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3689999999999999999999999999999998532 1111      12358899999999988877664       46


Q ss_pred             cEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--H
Q 022625          165 RSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K  212 (294)
Q Consensus       165 d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~  212 (294)
                      |++||+.+.     +                         +.+.+++.+..+||++||...+.+......|..++..  .
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  161 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG  161 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence            999998321     0                         1223455567899999998777655444455444321  1


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCCCccee----eccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ----FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~----~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      +.+.....+...++++++++||.+...........    +..........+.+|+++++..++....  ..|+.+++.+|
T Consensus       162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12824        162 FTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISINGG  241 (245)
T ss_pred             HHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEECCC
Confidence            22222333455789999999999863221111000    1111223446689999999998886533  46899999887


Q ss_pred             C
Q 022625          287 S  287 (294)
Q Consensus       287 ~  287 (294)
                      .
T Consensus       242 ~  242 (245)
T PRK12824        242 L  242 (245)
T ss_pred             e
Confidence            4

>PRK08589 short chain dehydrogenase; Validated

Probab=99.63  E-value=2.1e-14  Score=129.34  Aligned_cols=189  Identities=15%  Similarity=0.084  Sum_probs=124.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +.+|+++||||+++||++++++|+++|++|+++.|+ +++.+.      .+.++.++.+|++|.+++.++++       .
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999999999999999999998 443221      12357889999999988876664       4


Q ss_pred             CcEEEEcCC-----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          164 VRSIICPSE-----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       164 ~d~Vi~~~~-----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      +|++||+.+     + +                         +...+++.+ .+||++||.....+......|..+|.. 
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaal  161 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAV  161 (272)
T ss_pred             cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHHH
Confidence            699999821     1 0                         111233444 799999998776654444455444321 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCC----cc----eeecc----CCCCCCCcCHHHHHHHHHHHhhCCC--C
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QG----FQFEE----GCAANGSLSKEDAAFICVEALESIP--Q  276 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----~~----~~~~~----g~~~~~~Is~eDvA~~iv~aL~~~~--~  276 (294)
                       .+.+.....+...|++++.|+||.+.......    ..    ..+..    ......+.+++|+|+++++++..+.  .
T Consensus       162 ~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  241 (272)
T PRK08589        162 INFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFI  241 (272)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence             12222223344578999999999876221110    00    00000    0111234689999999999887543  4


Q ss_pred             CCcEEEEecCC
Q 022625          277 TGLIFEVCEIS  287 (294)
Q Consensus       277 ~g~~~~v~~g~  287 (294)
                      .|+.+.+.+|.
T Consensus       242 ~G~~i~vdgg~  252 (272)
T PRK08589        242 TGETIRIDGGV  252 (272)
T ss_pred             CCCEEEECCCc
Confidence            68888887764

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=2.6e-14  Score=126.56  Aligned_cols=191  Identities=13%  Similarity=0.116  Sum_probs=124.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-ccchhhh---cCCCcEEeecCCCCHHHHHHHhcC--------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES---FGTYVESMAGDASNKKFLKTALRG--------V  164 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~-~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~~--------~  164 (294)
                      +.+|+++||||+|+||+++++.|+++|++|+++.++ .++....   .+.++.++.+|++|.+++.++++.        +
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i   82 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI   82 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            356899999999999999999999999999887654 3332221   234688899999999888877653        7


Q ss_pred             cEEEEcCCc-----------h---------------------HHhh----hhhcCCCEEEEecccccccCCCCchhccch
Q 022625          165 RSIICPSEG-----------F---------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       165 d~Vi~~~~~-----------~---------------------~~~~----~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                      |++||+.+.           +                     +.++    +.+.+..+||++||.....+..+...|..+
T Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  162 (253)
T PRK08642         83 TTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTA  162 (253)
T ss_pred             eEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHH
Confidence            999997310           0                     1111    234556799999987655444444455444


Q ss_pred             hHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCc--ce---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCc
Q 022625          209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL  279 (294)
Q Consensus       209 ~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~--~~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~  279 (294)
                      |...  +.+.....+...+++++.|+||++........  ..   .+........+.+.+|+|++++.++..+.  ..|.
T Consensus       163 K~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  242 (253)
T PRK08642        163 KAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQ  242 (253)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcCccCC
Confidence            3311  11222222234689999999998763211110  00   01111222457899999999999997543  5789


Q ss_pred             EEEEecCC
Q 022625          280 IFEVCEIS  287 (294)
Q Consensus       280 ~~~v~~g~  287 (294)
                      .+.+.+|.
T Consensus       243 ~~~vdgg~  250 (253)
T PRK08642        243 NLVVDGGL  250 (253)
T ss_pred             EEEeCCCe
Confidence            99888763

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.63  E-value=1.8e-14  Score=128.96  Aligned_cols=191  Identities=15%  Similarity=0.166  Sum_probs=126.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------c-CCCcEEeecCCCCHHHHHHHhc-----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      .+.+|+++||||+++||++++++|+++|++|+++.|+++++.+.       . +..+..+.+|++|.+++.++++     
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            35679999999999999999999999999999999988654322       1 1257788999999988876553     


Q ss_pred             --CCcEEEEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 --GVRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 --~~d~Vi~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                        .+|++||+.+.             +                 +...+++.+..+||++||..+..+......|..++.
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKa  164 (265)
T PRK07062         85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARA  164 (265)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHH
Confidence              46999998321             0                 112234455679999999877655444444433332


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCCCC-------cceeec---------cCCCCCCCcCHHHHHHHHHHHhh
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-------QGFQFE---------EGCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-------~~~~~~---------~g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                      .  .+.+.....+...|++++.|+||++.......       ....+.         .......+..++|+|.++++++.
T Consensus       165 al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s  244 (265)
T PRK07062        165 GLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLAS  244 (265)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhC
Confidence            1  12222333344579999999999876321100       000000         11112235688999999999887


Q ss_pred             CCC--CCCcEEEEecC
Q 022625          273 SIP--QTGLIFEVCEI  286 (294)
Q Consensus       273 ~~~--~~g~~~~v~~g  286 (294)
                      ...  ..|+++.+.+|
T Consensus       245 ~~~~~~tG~~i~vdgg  260 (265)
T PRK07062        245 PLSSYTTGSHIDVSGG  260 (265)
T ss_pred             chhcccccceEEEcCc
Confidence            533  46888888766

>PRK08643 acetoin reductase; Validated

Probab=99.63  E-value=1.6e-14  Score=128.53  Aligned_cols=188  Identities=15%  Similarity=0.099  Sum_probs=122.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      +|+++||||+|+||++++++|+++|++|+++.|+.++....      .+..+.++.+|++|++++.++++       ++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999999987653322      12357789999999988777664       569


Q ss_pred             EEEEcCCc-----h-------------------------HHhhhhhcC-CCEEEEecccccccCCCCchhccchhHH--H
Q 022625          166 SIICPSEG-----F-------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--K  212 (294)
Q Consensus       166 ~Vi~~~~~-----~-------------------------~~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~--~  212 (294)
                      ++||+.+.     +                         +.+.+.+.+ ..+||++||.....+......|..+|..  .
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  161 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRG  161 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHHH
Confidence            99998321     0                         011122222 3689999998765554444455444331  1


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCC----------Cccee-----eccCCCCCCCcCHHHHHHHHHHHhhCCC--
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGG----------KQGFQ-----FEEGCAANGSLSKEDAAFICVEALESIP--  275 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~----------~~~~~-----~~~g~~~~~~Is~eDvA~~iv~aL~~~~--  275 (294)
                      +.+.....+...|++++.|+||++......          .....     +........+.+.+|+|.++.+++....  
T Consensus       162 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~~  241 (256)
T PRK08643        162 LTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSDY  241 (256)
T ss_pred             HHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            122222233457899999999987521100          00000     0011122345689999999999887543  


Q ss_pred             CCCcEEEEecC
Q 022625          276 QTGLIFEVCEI  286 (294)
Q Consensus       276 ~~g~~~~v~~g  286 (294)
                      ..|.++.+.+|
T Consensus       242 ~~G~~i~vdgg  252 (256)
T PRK08643        242 ITGQTIIVDGG  252 (256)
T ss_pred             ccCcEEEeCCC
Confidence            57888888665

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.63  E-value=2.4e-14  Score=126.14  Aligned_cols=190  Identities=13%  Similarity=0.069  Sum_probs=122.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch-hh------hcCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-ME------SFGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~-~~------~~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .++++++||||+|+||++++++|+++|++|+++.|+.+.. .+      ....++.++.+|++|.+++.++++       
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4579999999999999999999999999998887764321 11      123468889999999988888776       


Q ss_pred             CCcEEEEcCCc-----h---------------------HHhhhhhc--CCCEEEEecccccccCCCCchhccchhHHH--
Q 022625          163 GVRSIICPSEG-----F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARK--  212 (294)
Q Consensus       163 ~~d~Vi~~~~~-----~---------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--  212 (294)
                      ++|++||+.+.     +                     +...+...  ...+||++||.....+......|..++...  
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~  162 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEG  162 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHHHHH
Confidence            57999998321     0                     11112111  235899999987765554445554443311  


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCC-C-Ccce---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPG-G-KQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~-~-~~~~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                      +.+.....+...++++++++||.+..... . ....   .+........+.+++|+|+.++.++..+.  ..|.++++.+
T Consensus       163 ~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  242 (245)
T PRK12937        163 LVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNG  242 (245)
T ss_pred             HHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccccEEEeCC
Confidence            11222222344689999999998753211 0 0000   01111222345689999999999887654  4578888876


Q ss_pred             C
Q 022625          286 I  286 (294)
Q Consensus       286 g  286 (294)
                      +
T Consensus       243 g  243 (245)
T PRK12937        243 G  243 (245)
T ss_pred             C
Confidence            5

>PLN02253 xanthoxin dehydrogenase

Probab=99.63  E-value=1.9e-14  Score=129.90  Aligned_cols=192  Identities=12%  Similarity=0.062  Sum_probs=124.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---c--CCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~--~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.+...+.   .  ..+++++.+|++|.+++.++++       .
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~   94 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT   94 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            45679999999999999999999999999999999986543321   1  1358899999999999888776       5


Q ss_pred             CcEEEEcCC------c-h---------------------HHhh----hhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          164 VRSIICPSE------G-F---------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       164 ~d~Vi~~~~------~-~---------------------~~~~----~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      +|++||+.+      . +                     +.++    +.+.+..++|++||..+..+......|..+|..
T Consensus        95 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
T PLN02253         95 LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHA  174 (280)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHH
Confidence            799999821      0 0                     1111    122344689999887764433333345444331


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCC------CCccee-------e-ccCCCC-CCCcCHHHHHHHHHHHhhCC
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPG------GKQGFQ-------F-EEGCAA-NGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~------~~~~~~-------~-~~g~~~-~~~Is~eDvA~~iv~aL~~~  274 (294)
                        .+.+.....+...++++++++||.+.....      ......       + ...... ...++++|+|.++++++..+
T Consensus       175 ~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~  254 (280)
T PLN02253        175 VLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASDE  254 (280)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCcc
Confidence              112222223334689999999998763211      000000       0 001111 23478999999999988764


Q ss_pred             C--CCCcEEEEecCC
Q 022625          275 P--QTGLIFEVCEIS  287 (294)
Q Consensus       275 ~--~~g~~~~v~~g~  287 (294)
                      .  ..|..+.+.+|.
T Consensus       255 ~~~i~G~~i~vdgG~  269 (280)
T PLN02253        255 ARYISGLNLMIDGGF  269 (280)
T ss_pred             cccccCcEEEECCch
Confidence            4  368899998774

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.63  E-value=3.6e-14  Score=129.30  Aligned_cols=193  Identities=18%  Similarity=0.182  Sum_probs=126.7

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch-hh---h---cCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-ME---S---FGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~-~~---~---~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ..+.+|+++||||+|+||.+++++|+++|++|+++.|+.... ..   .   .+..+.++.+|++|.+.+.++++     
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            456689999999999999999999999999999999876431 11   1   12357789999999988877664     


Q ss_pred             --CCcEEEEcCCc------h---------------------HHhhhhh--cCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 --GVRSIICPSEG------F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 --~~d~Vi~~~~~------~---------------------~~~~~~~--~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                        .+|+|||+.+.      +                     +..++..  ....+||++||..++.+......|..+|..
T Consensus       122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a  201 (290)
T PRK06701        122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGA  201 (290)
T ss_pred             cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHHH
Confidence              46999998321      0                     1111211  123589999998877655444455443321


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc--c---eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEE
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--G---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE  282 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~--~---~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~  282 (294)
                        .+.+.....+...|++++.|+||.+........  .   ..+........+.+.+|+|+++++++....  ..|.++.
T Consensus       202 ~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~  281 (290)
T PRK06701        202 IHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQMLH  281 (290)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEE
Confidence              122222222334689999999998763211100  0   001112223456889999999999998654  4688999


Q ss_pred             EecCC
Q 022625          283 VCEIS  287 (294)
Q Consensus       283 v~~g~  287 (294)
                      +.+|.
T Consensus       282 idgg~  286 (290)
T PRK06701        282 VNGGV  286 (290)
T ss_pred             eCCCc
Confidence            98764

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.63  E-value=2.5e-14  Score=127.52  Aligned_cols=189  Identities=14%  Similarity=0.118  Sum_probs=121.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc-cchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~-~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      .+|+++||||+|+||++++++|+++|++|+++.+.. +.....      .+..++++.+|++|.+++.++++       .
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999998877643 322111      13468889999999988887765       3


Q ss_pred             CcEEEEcCCc-----h---------------------HHhh----hhhcCCCEEEEecccccccCCCCchhccchhHHHH
Q 022625          164 VRSIICPSEG-----F---------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL  213 (294)
Q Consensus       164 ~d~Vi~~~~~-----~---------------------~~~~----~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~  213 (294)
                      +|+|||+.+.     +                     +.+.    +...+-+++|+++|.....+......|..+|... 
T Consensus        88 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~-  166 (258)
T PRK09134         88 ITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAAL-  166 (258)
T ss_pred             CCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHH-
Confidence            6999998321     0                     1111    2223446889998876554444444554443311 


Q ss_pred             HHHHHHHHHh--CCCCEEEEEccceecCCCCCcc-e-eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 022625          214 AEQDESMLMA--SGIPYTIIRTGVLQNTPGGKQG-F-QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       214 ~~~ae~~l~~--~gl~~tivRPg~l~~~~~~~~~-~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                      ...++.+.++  .+++++.|+||.+......... . ............+++|+|++++.+++.+...|+.|.+.+|.
T Consensus       167 ~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~  244 (258)
T PRK09134        167 WTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTPEEIAAAVRYLLDAPSVTGQMIAVDGGQ  244 (258)
T ss_pred             HHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCCcCCCEEEECCCe
Confidence            1111111111  3499999999987633211100 0 00011122335789999999999999877788999998875

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=3.7e-14  Score=124.43  Aligned_cols=186  Identities=14%  Similarity=0.132  Sum_probs=123.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH-HHHHHHhcCCcEEEEcCC---
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTALRGVRSIICPSE---  172 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~-~~l~~~l~~~d~Vi~~~~---  172 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|++....   ..++.++.+|++++ +.+.+.+..+|++||+.+   
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~   79 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL---SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILD   79 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc---CCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCC
Confidence            45789999999999999999999999999999999865421   34678899999987 555555567899999832   


Q ss_pred             --c-h---------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHHHHHHHHH
Q 022625          173 --G-F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESMLM  222 (294)
Q Consensus       173 --~-~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~ae~~l~  222 (294)
                        . +                     +..    .+.+.+..+||++||.....+......|...|..  .+.+.....+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~  159 (235)
T PRK06550         80 DYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYA  159 (235)
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHHHHHhh
Confidence              1 0                     111    1233455789999998776554444455444321  12222222234


Q ss_pred             hCCCCEEEEEccceecCCCCCccee-------eccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          223 ASGIPYTIIRTGVLQNTPGGKQGFQ-------FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       223 ~~gl~~tivRPg~l~~~~~~~~~~~-------~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      ..|+++++|+||.+.. +.......       +........+.+.+|+|+++++++.+..  ..|.++.+.+|
T Consensus       160 ~~gi~v~~v~pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg  231 (235)
T PRK06550        160 KDGIQVFGIAPGAVKT-PMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTIVPIDGG  231 (235)
T ss_pred             hcCeEEEEEeeCCccC-cccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCCCcEEEECCc
Confidence            4789999999998752 21111000       0011222346789999999999986543  46788887665

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.62  E-value=2.9e-14  Score=127.13  Aligned_cols=192  Identities=15%  Similarity=0.100  Sum_probs=122.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      ...+++++||||+|+||++++++|+++|++|++++|+.++.....      +..+.++.+|++|.++++++++       
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~   88 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG   88 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            356799999999999999999999999999999999876543221      2357789999999988866553       


Q ss_pred             CCcEEEEcCCc-------------h-------------HHhhh-----hhcCCCEEEEecccccccCCCC----chhccc
Q 022625          163 GVRSIICPSEG-------------F-------------ISNAG-----SLKGVQHVILLSQLSVYRGSGG----IQALMK  207 (294)
Q Consensus       163 ~~d~Vi~~~~~-------------~-------------~~~~~-----~~~gv~r~V~vSs~~~~~~~~~----~~~~~~  207 (294)
                      ..|+|||+++.             +             +.+++     ...+.++||++||...+.+...    ...|..
T Consensus        89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~  168 (259)
T PRK08213         89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNT  168 (259)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHH
Confidence            46999998321             0             12222     2236679999999765433221    123332


Q ss_pred             hhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcce----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCc
Q 022625          208 GNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL  279 (294)
Q Consensus       208 ~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~  279 (294)
                      +|...  +.+.....+...++++++++||.+..........    ..........+...+|+|..+..++....  ..|+
T Consensus       169 sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~  248 (259)
T PRK08213        169 SKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAALLLASDASKHITGQ  248 (259)
T ss_pred             HHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCC
Confidence            22211  1111222233468999999999876322111000    01111122234478999999998886654  4688


Q ss_pred             EEEEecCC
Q 022625          280 IFEVCEIS  287 (294)
Q Consensus       280 ~~~v~~g~  287 (294)
                      .+.+.++-
T Consensus       249 ~~~~~~~~  256 (259)
T PRK08213        249 ILAVDGGV  256 (259)
T ss_pred             EEEECCCe
Confidence            88887764

>PRK12743 oxidoreductase; Provisional

Probab=99.62  E-value=3.7e-14  Score=126.40  Aligned_cols=189  Identities=18%  Similarity=0.123  Sum_probs=122.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc-cchhhh------cCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES------FGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~-~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      +++++||||+|+||++++++|+++|++|+++.|.. +.....      .+..++++.+|++|.++++++++       .+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999886543 332211      23468899999999988777664       46


Q ss_pred             cEEEEcCCc-----h---------------------HHhh----hhhcC-CCEEEEecccccccCCCCchhccchhHH--
Q 022625          165 RSIICPSEG-----F---------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       165 d~Vi~~~~~-----~---------------------~~~~----~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      |++||+.+.     +                     +.++    +.+.+ -++||++||.....+..+...|...|..  
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  161 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALG  161 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHHH
Confidence            999998321     0                     1111    22222 3689999998776655555555444331  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-ce---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                      .+.+.....+...+++++.|+||.+........ ..   ....+.......+.+|+|.++..++....  ..|.++.+.+
T Consensus       162 ~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg  241 (256)
T PRK12743        162 GLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSLIVDG  241 (256)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence            112222233445789999999998773211100 00   00111222345689999999999887654  4688888877


Q ss_pred             CC
Q 022625          286 IS  287 (294)
Q Consensus       286 g~  287 (294)
                      |.
T Consensus       242 g~  243 (256)
T PRK12743        242 GF  243 (256)
T ss_pred             Cc
Confidence            63

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.62  E-value=2.5e-14  Score=127.66  Aligned_cols=175  Identities=13%  Similarity=0.173  Sum_probs=117.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      +++++||||+|+||++++++|+++|++|++++|++.+....      .+..+.++.+|++|.+++.++++       ++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999987654322      13467889999999998887765       579


Q ss_pred             EEEEcCCc-----h----------------------HHhhhh---hcCCCEEEEecccccccCCCCchhccchhHHH--H
Q 022625          166 SIICPSEG-----F----------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNARK--L  213 (294)
Q Consensus       166 ~Vi~~~~~-----~----------------------~~~~~~---~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~  213 (294)
                      +|||+.+.     +                      +.+.+.   ..+.+++|++||..++.+..+...|..+|..-  +
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~  160 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGF  160 (263)
T ss_pred             EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHHHHH
Confidence            99998221     0                      111121   22457899999988776655555554443211  1


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCC----Cccee-eccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGFQ-FEEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~----~~~~~-~~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                      .+.....+...++++++++||.+......    ..... ...+.....+++++|+|++++++++.
T Consensus       161 ~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        161 FDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             HHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhhC
Confidence            11112223447899999999987633211    00111 11112223679999999999999975

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.7e-14  Score=129.06  Aligned_cols=177  Identities=14%  Similarity=0.108  Sum_probs=117.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-----CCCcEEeecCCCCHHHHHHHhc------CCc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALR------GVR  165 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~v~~v~~D~~d~~~l~~~l~------~~d  165 (294)
                      +.+++++||||+|+||++++++|+++|++|++++|++++..+..     +.+++++.+|++|.+++.++++      .+|
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            35789999999999999999999999999999999987644332     3468899999999988876654      469


Q ss_pred             EEEEcCCc-----h---------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH--HH
Q 022625          166 SIICPSEG-----F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL  213 (294)
Q Consensus       166 ~Vi~~~~~-----~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~  213 (294)
                      ++||+++.     +                     +.+    .+.+.+..++|++||..+..+......|..++..  .+
T Consensus        83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  162 (263)
T PRK09072         83 VLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGF  162 (263)
T ss_pred             EEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHHHH
Confidence            99998321     0                     111    1233445789999987665444444445444331  11


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      .+.....+...++.++.+.||.+........ .............+++|+|+.+++++++.
T Consensus       163 ~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        163 SEALRRELADTGVRVLYLAPRATRTAMNSEA-VQALNRALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHhcccCcEEEEEecCcccccchhhh-cccccccccCCCCCHHHHHHHHHHHHhCC
Confidence            2222222334789999999998753221111 00001111124578999999999999874

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.62  E-value=3.6e-14  Score=124.68  Aligned_cols=188  Identities=16%  Similarity=0.122  Sum_probs=123.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-Cccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R-~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      |+++||||+|+||++++++|+++|++|+++.| +++...+.      ...++.++.+|++|.+.+.++++       .+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            68999999999999999999999999999988 44332221      12368899999999988776654       469


Q ss_pred             EEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HH
Q 022625          166 SIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL  213 (294)
Q Consensus       166 ~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~  213 (294)
                      +|||+.+.     +                         +...+++.+.++||++||.....+..+...|..++..  .+
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~  160 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGF  160 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHHH
Confidence            99998321     0                         1123455677899999997665444444444333321  12


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCCcc---e-eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---F-QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~---~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      .+.....+...+++++.++||++.+.......   . .+........+...+|++.++..++.++.  ..|+.+.+.+|.
T Consensus       161 ~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       161 TKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSINGGL  240 (242)
T ss_pred             HHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence            22222334457999999999997733211100   0 01112222345678999999988776543  568999998875

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.62  E-value=3.9e-14  Score=131.56  Aligned_cols=178  Identities=15%  Similarity=0.138  Sum_probs=120.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      ..+++|+||||+|+||++++++|+++|++|+++.|+++++.+.      .+..+.++.+|++|.++++++++       .
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR   84 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4578999999999999999999999999999999998765432      23457788999999998887763       5


Q ss_pred             CcEEEEcCC----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          164 VRSIICPSE----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       164 ~d~Vi~~~~----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      +|++||+.+    + +                         +...+++.+..+||++||...+.+......|..+|..  
T Consensus        85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~  164 (330)
T PRK06139         85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLR  164 (330)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHH
Confidence            799999832    0 0                         1112344556789999998776655555555444431  


Q ss_pred             HHHHHHHHHHHh-CCCCEEEEEccceecCCCCCcceeec--cCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          212 KLAEQDESMLMA-SGIPYTIIRTGVLQNTPGGKQGFQFE--EGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       212 ~~~~~ae~~l~~-~gl~~tivRPg~l~~~~~~~~~~~~~--~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      .+.+.....+.. .++.++.|.||.+. .+.......+.  ........++++|+|++++.++.++.
T Consensus       165 ~~~~sL~~El~~~~gI~V~~v~Pg~v~-T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        165 GFSEALRGELADHPDIHVCDVYPAFMD-TPGFRHGANYTGRRLTPPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEecCCcc-CcccccccccccccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence            122222222334 48999999999876 32211101110  11122346799999999999997753

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.62  E-value=5.3e-15  Score=131.90  Aligned_cols=164  Identities=18%  Similarity=0.172  Sum_probs=91.1

Q ss_pred             EEcCCChHHHHHHHHHHHCCC--eEEEEEcCccc--hhhh-----------------cCCCcEEeecCCCCH------HH
Q 022625          104 VTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN--AMES-----------------FGTYVESMAGDASNK------KF  156 (294)
Q Consensus       104 VtGatG~IG~~l~~~L~~~g~--~V~~~~R~~~~--~~~~-----------------~~~~v~~v~~D~~d~------~~  156 (294)
                      |||||||+|++++.+|++++.  +|++++|..+.  +.+.                 ...+++++.+|++++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999886  89999998632  1110                 156899999999874      56


Q ss_pred             HHHHhcCCcEEEEcCCc-------------------hHHhhhhhcCCCEEEEecccccccCCCC-c--------------
Q 022625          157 LKTALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGSGG-I--------------  202 (294)
Q Consensus       157 l~~~l~~~d~Vi~~~~~-------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~-~--------------  202 (294)
                      +..+.+.+|+|||++..                   .+.++|...+.++|+|+||..+...... .              
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~  160 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP  160 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred             hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence            77777899999998321                   1556677666779999999433221110 0              


Q ss_pred             hhccchhHHHHHHHHHHHHHh----CCCCEEEEEccceecCCCCCc----c--e----------ee----ccCCCCCCCc
Q 022625          203 QALMKGNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPGGKQ----G--F----------QF----EEGCAANGSL  258 (294)
Q Consensus       203 ~~~~~~~~~~~~~~ae~~l~~----~gl~~tivRPg~l~~~~~~~~----~--~----------~~----~~g~~~~~~I  258 (294)
                      .......+...|-.+|.++++    .|++++|+|||.+.+.+..+.    .  .          .+    .......+++
T Consensus       161 ~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~v  240 (249)
T PF07993_consen  161 PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLV  240 (249)
T ss_dssp             -TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EE
T ss_pred             hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEE
Confidence            000111122335567777765    399999999999885443211    0  0          01    1122346778


Q ss_pred             CHHHHHHHH
Q 022625          259 SKEDAAFIC  267 (294)
Q Consensus       259 s~eDvA~~i  267 (294)
                      +++.+|++|
T Consensus       241 PVD~va~aI  249 (249)
T PF07993_consen  241 PVDYVARAI  249 (249)
T ss_dssp             EHHHHHHHH
T ss_pred             CHHHHHhhC
Confidence            888888875

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK09242 tropinone reductase; Provisional

Probab=99.62  E-value=5.3e-14  Score=125.28  Aligned_cols=192  Identities=13%  Similarity=0.077  Sum_probs=126.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--------CCCcEEeecCCCCHHHHHHHhc------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      +.+|+++||||+|+||++++++|+++|++|++++|+.+...+..        +..+.++.+|+++.+++.++++      
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW   86 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46799999999999999999999999999999999876543321        2357788999999987766554      


Q ss_pred             -CCcEEEEcCCc-----h---------------------HH----hhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 -GVRSIICPSEG-----F---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~---------------------~~----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                       .+|++||+.+.     .                     +.    ..+++.+.++||++||.....+......|..++..
T Consensus        87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a  166 (257)
T PRK09242         87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAA  166 (257)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHHH
Confidence             56999998321     0                     11    12334566899999998776655444455443321


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc----ce--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                        .+.+.....+...+++++.|+||++........    ..  .+.......-..+.+|++.++..++....  ..|+.+
T Consensus       167 ~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i  246 (257)
T PRK09242        167 LLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYITGQCI  246 (257)
T ss_pred             HHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEE
Confidence              112222222345789999999998763211100    00  00011111234478999999999886543  357888


Q ss_pred             EEecCCc
Q 022625          282 EVCEISN  288 (294)
Q Consensus       282 ~v~~g~~  288 (294)
                      .+.+|..
T Consensus       247 ~~~gg~~  253 (257)
T PRK09242        247 AVDGGFL  253 (257)
T ss_pred             EECCCeE
Confidence            8876643

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.62  E-value=3.9e-14  Score=126.84  Aligned_cols=191  Identities=15%  Similarity=0.104  Sum_probs=124.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      ..+++++||||+|+||.+++++|+++|++|++++|++++..+.      .+..++++.+|+++.+++.++++       .
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR   87 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999999999999999999987654332      13467889999999998877664       5


Q ss_pred             CcEEEEcCCc-----h---------------------HHhhh----hh-cCCCEEEEecccccccCCCCchhccchhHHH
Q 022625          164 VRSIICPSEG-----F---------------------ISNAG----SL-KGVQHVILLSQLSVYRGSGGIQALMKGNARK  212 (294)
Q Consensus       164 ~d~Vi~~~~~-----~---------------------~~~~~----~~-~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~  212 (294)
                      +|+|||+++.     +                     +.+++    .+ .+.++||++||..+..+..+...|..+|..-
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~  167 (263)
T PRK07814         88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAAL  167 (263)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHHHH
Confidence            7999997321     0                     11112    12 4567999999987665555555554443311


Q ss_pred             HHHHHHHHHH--hCCCCEEEEEccceecCCCC----Ccce--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEE
Q 022625          213 LAEQDESMLM--ASGIPYTIIRTGVLQNTPGG----KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE  282 (294)
Q Consensus       213 ~~~~ae~~l~--~~gl~~tivRPg~l~~~~~~----~~~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~  282 (294)
                      . ..++.+..  ..+++++.|+||.+......    ....  .+..........+.+|+|+++++++....  ..++.+.
T Consensus       168 ~-~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~  246 (263)
T PRK07814        168 A-HYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLE  246 (263)
T ss_pred             H-HHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEE
Confidence            0 11111111  13689999999987532111    0000  00001112234588999999999887542  4688888


Q ss_pred             EecCCc
Q 022625          283 VCEISN  288 (294)
Q Consensus       283 v~~g~~  288 (294)
                      +.++..
T Consensus       247 ~~~~~~  252 (263)
T PRK07814        247 VDGGLT  252 (263)
T ss_pred             ECCCcc
Confidence            876643

>PRK07985 oxidoreductase; Provisional

Probab=99.61  E-value=5.8e-14  Score=128.22  Aligned_cols=192  Identities=17%  Similarity=0.181  Sum_probs=124.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc--chhhh------cCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NAMES------FGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~--~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.+  ...+.      .+..+.++.+|++|.+++.++++     
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            467789999999999999999999999999998876532  21111      12357789999999988776654     


Q ss_pred             --CCcEEEEcCCc------h---------------------HHhhhhh--cCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 --GVRSIICPSEG------F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 --~~d~Vi~~~~~------~---------------------~~~~~~~--~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                        .+|++||+.+.      +                     +..++..  ..-.+||++||..++.+......|..+|..
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKaa  205 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAA  205 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHHH
Confidence              46999997321      0                     1111211  112589999999887665555556544431


Q ss_pred             H--HHHHHHHHHHhCCCCEEEEEccceecCCCC--C-c-ce--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGG--K-Q-GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       212 ~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~--~-~-~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                      -  +.+.....+...|+++++|+||.+......  . . ..  .+...........++|+|.++++++....  ..|.++
T Consensus       206 l~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~itG~~i  285 (294)
T PRK07985        206 ILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVH  285 (294)
T ss_pred             HHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCccccEE
Confidence            1  122222233457999999999998632110  0 0 00  01111122335689999999999987644  468888


Q ss_pred             EEecCC
Q 022625          282 EVCEIS  287 (294)
Q Consensus       282 ~v~~g~  287 (294)
                      .+.+|.
T Consensus       286 ~vdgG~  291 (294)
T PRK07985        286 GVCGGE  291 (294)
T ss_pred             eeCCCe
Confidence            887764

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.61  E-value=4.7e-14  Score=124.78  Aligned_cols=169  Identities=20%  Similarity=0.221  Sum_probs=114.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--------CCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +++++||||+|+||++++++|+++|++|+++.|++++..+..        +..++++.+|++|.+++.++++       +
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            589999999999999999999999999999999886543321        2357889999999988776554       5


Q ss_pred             CcEEEEcCC----c------h--------------------HHhhhhhcCCCEEEEecccccccCCC-CchhccchhHHH
Q 022625          164 VRSIICPSE----G------F--------------------ISNAGSLKGVQHVILLSQLSVYRGSG-GIQALMKGNARK  212 (294)
Q Consensus       164 ~d~Vi~~~~----~------~--------------------~~~~~~~~gv~r~V~vSs~~~~~~~~-~~~~~~~~~~~~  212 (294)
                      +|++||+.+    .      .                    +.+.+++.+.++||++||..+..+.. ....|..++..-
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~  161 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGV  161 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHHH
Confidence            799999732    0      0                    11223456778999999977654332 233454443211


Q ss_pred             --HHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       213 --~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                        +.+.....+...++++++|+||++.........       .....++.+|.|+.++++++..
T Consensus       162 ~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~-------~~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        162 ASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAK-------STPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCcCcchhhhccc-------cCCccCCHHHHHHHHHHHHhcC
Confidence              111111222346899999999998732211110       1123578999999999999763

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.61  E-value=3.8e-14  Score=125.22  Aligned_cols=190  Identities=13%  Similarity=0.105  Sum_probs=122.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-Cccchhh----h--cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME----S--FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R-~~~~~~~----~--~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      .+|+++||||+|+||+.++++|+++|++|+++.+ +.....+    .  ....+..+.+|++|.+++.++++       .
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999988654 3222111    1  12356678899999988877664       5


Q ss_pred             CcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          164 VRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       164 ~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      +|+|||+.+.     +                         +...+.+.+.++||++||.....+......|..++..  
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~  161 (246)
T PRK12938         82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIH  161 (246)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHH
Confidence            7999998321     0                         1122445677899999997665544444455443331  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-ce---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                      .+.+.....+...+++++.|+||.+........ ..   .+..........+.+|++.++.+++..+.  ..|..+.+.+
T Consensus       162 ~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~  241 (246)
T PRK12938        162 GFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNG  241 (246)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEEEECC
Confidence            112222223345789999999998773221110 00   01111222345689999999999886643  4688888876


Q ss_pred             CC
Q 022625          286 IS  287 (294)
Q Consensus       286 g~  287 (294)
                      +.
T Consensus       242 g~  243 (246)
T PRK12938        242 GL  243 (246)
T ss_pred             cc
Confidence            63

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.61  E-value=3.4e-14  Score=126.30  Aligned_cols=189  Identities=13%  Similarity=0.074  Sum_probs=123.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+++++....      ..+++++.+|+++.+++.++++       .
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            46799999999999999999999999999999999987654321      2357889999999988887765       4


Q ss_pred             CcEEEEcCCc-----h---------------------HHh----hhhhcC--------CCEEEEecccccccCCCCchhc
Q 022625          164 VRSIICPSEG-----F---------------------ISN----AGSLKG--------VQHVILLSQLSVYRGSGGIQAL  205 (294)
Q Consensus       164 ~d~Vi~~~~~-----~---------------------~~~----~~~~~g--------v~r~V~vSs~~~~~~~~~~~~~  205 (294)
                      +|++||+.+.     +                     +.+    .+.+..        ..++|++||.....+.....+|
T Consensus        87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y  166 (258)
T PRK06949         87 IDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLY  166 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHH
Confidence            7999998321     0                     001    111121        3589999998776554444455


Q ss_pred             cchhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcce------eeccCCCCCCCcCHHHHHHHHHHHhhCCC--
Q 022625          206 MKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF------QFEEGCAANGSLSKEDAAFICVEALESIP--  275 (294)
Q Consensus       206 ~~~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--  275 (294)
                      ..+|...  +.+.....+...++++++|+||.+. .+......      .+..-.....+..++|+|..+++++..+.  
T Consensus       167 ~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~  245 (258)
T PRK06949        167 CMSKAAVVHMTRAMALEWGRHGINVNAICPGYID-TEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADESQF  245 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCc-CCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcC
Confidence            4433211  1111111223468999999999986 33211100      00000112345568999999999887544  


Q ss_pred             CCCcEEEEecC
Q 022625          276 QTGLIFEVCEI  286 (294)
Q Consensus       276 ~~g~~~~v~~g  286 (294)
                      ..|..+.+.+|
T Consensus       246 ~~G~~i~~dgg  256 (258)
T PRK06949        246 INGAIISADDG  256 (258)
T ss_pred             CCCcEEEeCCC
Confidence            46777777665

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.61  E-value=4.8e-14  Score=126.93  Aligned_cols=178  Identities=14%  Similarity=0.127  Sum_probs=116.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-------CCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi~~~  171 (294)
                      +|+++||||+|+||++++++|+++|++|++++|+.++.......+++++.+|++|.++++++++       .+|+|||+.
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            4789999999999999999999999999999999876655444567889999999988877663       569999983


Q ss_pred             C----c-h---------------------HHhhh---hhcCCCEEEEecccccccCCCCchhccchhHH--HHHHHHHHH
Q 022625          172 E----G-F---------------------ISNAG---SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESM  220 (294)
Q Consensus       172 ~----~-~---------------------~~~~~---~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~ae~~  220 (294)
                      +    + +                     +...+   .+.+..++|++||..+..+......|..++..  .+.+.....
T Consensus        81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e  160 (274)
T PRK05693         81 GYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLE  160 (274)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence            2    1 0                     11111   11244789999997765544444455443321  122222233


Q ss_pred             HHhCCCCEEEEEccceecCCCCCcc----eeeccCC---------------CCCCCcCHHHHHHHHHHHhhCCCC
Q 022625          221 LMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGC---------------AANGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       221 l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~---------------~~~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      +...|+++++|+||.+.........    .......               ......+.+|+|+.++.++.++..
T Consensus       161 ~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~~  235 (274)
T PRK05693        161 LAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQSPR  235 (274)
T ss_pred             hhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhCCCC
Confidence            4457999999999987532211100    0000000               012246899999999999986543

>PRK06196 oxidoreductase; Provisional

Probab=99.61  E-value=3e-14  Score=131.20  Aligned_cols=187  Identities=15%  Similarity=0.097  Sum_probs=117.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      .+.+|+|+||||+|+||++++++|+++|++|++++|++++..+...  ..++++.+|++|.++++++++       ++|+
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence            3467999999999999999999999999999999999876544322  247899999999998877663       5799


Q ss_pred             EEEcCC-----------ch-----------------HHhhhhhcCCCEEEEecccccccCC------------CCchhcc
Q 022625          167 IICPSE-----------GF-----------------ISNAGSLKGVQHVILLSQLSVYRGS------------GGIQALM  206 (294)
Q Consensus       167 Vi~~~~-----------~~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~------------~~~~~~~  206 (294)
                      +||+++           ++                 +...+++.+..+||++||.......            .....|.
T Consensus       103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~  182 (315)
T PRK06196        103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYG  182 (315)
T ss_pred             EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHH
Confidence            999732           11                 1223445556799999997543211            1112232


Q ss_pred             chhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcce------eecc-CCCCC--CCcCHHHHHHHHHHHhhCCC
Q 022625          207 KGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF------QFEE-GCAAN--GSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       207 ~~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~------~~~~-g~~~~--~~Is~eDvA~~iv~aL~~~~  275 (294)
                      .+|...  +.+.....+...|+++++|+||.+..........      .+.. .....  ...+++|+|..+++++..+.
T Consensus       183 ~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  262 (315)
T PRK06196        183 QSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAATSPQ  262 (315)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCCc
Confidence            222211  1111222234478999999999986322111000      0000 00000  24578999999999997654


Q ss_pred             C--CCcEEE
Q 022625          276 Q--TGLIFE  282 (294)
Q Consensus       276 ~--~g~~~~  282 (294)
                      .  .+..|.
T Consensus       263 ~~~~~g~~~  271 (315)
T PRK06196        263 LAGMGGLYC  271 (315)
T ss_pred             cCCCCCeEe
Confidence            2  344443

>PRK05717 oxidoreductase; Validated

Probab=99.61  E-value=6.8e-14  Score=124.55  Aligned_cols=191  Identities=14%  Similarity=0.138  Sum_probs=122.4

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      ....+|+++||||+|+||++++++|+++|++|+++.|+.++..+.   .+..+.++.+|++|.+++.++++       .+
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            445689999999999999999999999999999998887554332   23467889999999988765543       36


Q ss_pred             cEEEEcCCc-------h---------------------HHhhhh---hcCCCEEEEecccccccCCCCchhccchhHHHH
Q 022625          165 RSIICPSEG-------F---------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNARKL  213 (294)
Q Consensus       165 d~Vi~~~~~-------~---------------------~~~~~~---~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~  213 (294)
                      |++||+++.       +                     +.+++.   .....+||++||.....+......|..+|... 
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~-  164 (255)
T PRK05717         86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGL-  164 (255)
T ss_pred             CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHHHHH-
Confidence            999998220       0                     111221   12236899999987765544444554443211 


Q ss_pred             HHHHHHHHHh--CCCCEEEEEccceecCCCCCc-ceee----ccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          214 AEQDESMLMA--SGIPYTIIRTGVLQNTPGGKQ-GFQF----EEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       214 ~~~ae~~l~~--~gl~~tivRPg~l~~~~~~~~-~~~~----~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                      ...++.+..+  .++++++|+||.+........ ...+    ..........+++|+|.++..++....  ..|+.+.+.
T Consensus       165 ~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~  244 (255)
T PRK05717        165 LALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVD  244 (255)
T ss_pred             HHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEEC
Confidence            1111222222  359999999998763221110 0000    001122345689999999998886543  357888886


Q ss_pred             cC
Q 022625          285 EI  286 (294)
Q Consensus       285 ~g  286 (294)
                      ++
T Consensus       245 gg  246 (255)
T PRK05717        245 GG  246 (255)
T ss_pred             CC
Confidence            55

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.61  E-value=5.9e-14  Score=125.48  Aligned_cols=191  Identities=15%  Similarity=0.103  Sum_probs=123.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-ccchhhh-------cCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES-------FGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~-~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      .+.+|+++||||+++||++++++|+++|++|+++.|. .+.+...       .+..+.++.+|++|.++++++++     
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED   84 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            4568999999999999999999999999999888654 3332211       23467899999999988877664     


Q ss_pred             --CCcEEEEcCC-----------ch-------------------------HHhhhhhcCCCEEEEecccccccCCCCchh
Q 022625          163 --GVRSIICPSE-----------GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQA  204 (294)
Q Consensus       163 --~~d~Vi~~~~-----------~~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~  204 (294)
                        .+|++||+.+           .+                         +...+++.+..+||++||.....+......
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  164 (260)
T PRK08416         85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAG  164 (260)
T ss_pred             cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCccc
Confidence              4699999731           00                         011133344569999999876544444445


Q ss_pred             ccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc----ce--eeccCCCCCCCcCHHHHHHHHHHHhhCCC-
Q 022625          205 LMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF--QFEEGCAANGSLSKEDAAFICVEALESIP-  275 (294)
Q Consensus       205 ~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-  275 (294)
                      |..+|..  .+.+.....+...|++++.|+||.+........    ..  .+........+.+++|+|.++++++.... 
T Consensus       165 Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~~~~  244 (260)
T PRK08416        165 HGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKAS  244 (260)
T ss_pred             chhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhh
Confidence            5444431  122233333445799999999998753211100    00  00011122346789999999999886543 


Q ss_pred             -CCCcEEEEecC
Q 022625          276 -QTGLIFEVCEI  286 (294)
Q Consensus       276 -~~g~~~~v~~g  286 (294)
                       ..|+.+.+.+|
T Consensus       245 ~~~G~~i~vdgg  256 (260)
T PRK08416        245 WLTGQTIVVDGG  256 (260)
T ss_pred             cccCcEEEEcCC
Confidence             46788877655

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.61  E-value=5.3e-14  Score=125.25  Aligned_cols=192  Identities=12%  Similarity=0.099  Sum_probs=127.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+.+|+|+||||+|+||++++++|+++|++|++++|+.+.....      .+.++.++.+|++|.+++.++++       
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            35689999999999999999999999999999999987654321      12357788999999988877654       


Q ss_pred             CCcEEEEcCCc-----h--------------------HHhh----hhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          163 GVRSIICPSEG-----F--------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       163 ~~d~Vi~~~~~-----~--------------------~~~~----~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      ..|++||+.+.     +                    +.+.    +.+.+..+||++||.....+..+...|..+|..  
T Consensus        88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  167 (255)
T PRK06113         88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAAS  167 (255)
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHH
Confidence            46999998321     0                    1111    223445699999998876655555555444431  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc---e--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~---~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                      .+.+.....+...++++++|.||.+.........   .  ..........+.+++|+++++..++....  ..|+++++.
T Consensus       168 ~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~  247 (255)
T PRK06113        168 HLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVS  247 (255)
T ss_pred             HHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEEC
Confidence            1122222233447899999999987632111100   0  00111122335689999999999887543  368999998


Q ss_pred             cCC
Q 022625          285 EIS  287 (294)
Q Consensus       285 ~g~  287 (294)
                      +|.
T Consensus       248 gg~  250 (255)
T PRK06113        248 GGG  250 (255)
T ss_pred             CCc
Confidence            873

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.61  E-value=4.8e-14  Score=124.00  Aligned_cols=188  Identities=15%  Similarity=0.154  Sum_probs=120.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-CCCcEEeecCCCCHHHHHHHhc-------CCcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-------GVRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi~~  170 (294)
                      +|+++||||+|+||++++++|+++|++|+++.|++++..+.. ..+++++.+|++|.++++++++       .+|++||+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            579999999999999999999999999999999876533221 2347889999999988776553       36999998


Q ss_pred             CCc-------------h-----------------HHhhhhhcC--CCEEEEecccccccCCCCchhccchhHHH--HHHH
Q 022625          171 SEG-------------F-----------------ISNAGSLKG--VQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQ  216 (294)
Q Consensus       171 ~~~-------------~-----------------~~~~~~~~g--v~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~  216 (294)
                      .+.             +                 +...+++.+  ..++|++||.....+......|..+|..-  +.+.
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~~  161 (236)
T PRK06483         82 ASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLS  161 (236)
T ss_pred             CccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHHH
Confidence            321             0                 111233333  46899999876654444444554443311  1111


Q ss_pred             HHHHHHhCCCCEEEEEccceecCCCCCcce--eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 022625          217 DESMLMASGIPYTIIRTGVLQNTPGGKQGF--QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       217 ae~~l~~~gl~~tivRPg~l~~~~~~~~~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                      ....+. .+++++.|+||.+..........  .........-...++|+|+++.+++...-..|+++.+.+|.
T Consensus       162 ~a~e~~-~~irvn~v~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~G~~i~vdgg~  233 (236)
T PRK06483        162 FAAKLA-PEVKVNSIAPALILFNEGDDAAYRQKALAKSLLKIEPGEEEIIDLVDYLLTSCYVTGRSLPVDGGR  233 (236)
T ss_pred             HHHHHC-CCcEEEEEccCceecCCCCCHHHHHHHhccCccccCCCHHHHHHHHHHHhcCCCcCCcEEEeCccc
Confidence            111122 35999999999875322111100  00011111223578999999999997655678999887663

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.60  E-value=5e-14  Score=124.45  Aligned_cols=170  Identities=18%  Similarity=0.123  Sum_probs=114.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHHhcCC----cEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGV----RSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~~~----d~Vi~~~~  172 (294)
                      +++++||||+|+||++++++|+++|++|+++.|+++++.+...  .+++++.+|++|.++++++++.+    |.+||+.+
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag   80 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG   80 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence            3789999999999999999999999999999999876554322  35888999999999999888763    67776521


Q ss_pred             c-----------------h---------HHhhhhh--cCCCEEEEecccccccCCCCchhccchhHH--HHHHHHHHHHH
Q 022625          173 G-----------------F---------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESMLM  222 (294)
Q Consensus       173 ~-----------------~---------~~~~~~~--~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~ae~~l~  222 (294)
                      .                 +         +.+++..  .+.+++|++||.....+......|..+|..  .+.+.....+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~  160 (240)
T PRK06101         81 DCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLR  160 (240)
T ss_pred             ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHHHHH
Confidence            0                 0         1111221  123589999987665544444455444331  12222223345


Q ss_pred             hCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          223 ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       223 ~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      .+|+++++++||.+..........      .....++++|+|+.++..++..
T Consensus       161 ~~gi~v~~v~pg~i~t~~~~~~~~------~~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        161 PKGIEVVTVFPGFVATPLTDKNTF------AMPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             hcCceEEEEeCCcCCCCCcCCCCC------CCCcccCHHHHHHHHHHHHhcC
Confidence            679999999999987332111100      1112479999999999999874

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.60  E-value=1.8e-14  Score=127.35  Aligned_cols=187  Identities=19%  Similarity=0.211  Sum_probs=132.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC--CCeEEEEEc-----Cccchhhh-cCCCcEEeecCCCCHHHHHHHhc--CCcEEEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKALVK-----DKRNAMES-FGTYVESMAGDASNKKFLKTALR--GVRSIIC  169 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~R-----~~~~~~~~-~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~  169 (294)
                      ++++|||+.||||+..+..+...  .++.+.+..     +...+.+. ..+..+++.+|+.+...+...+.  ..|.|+|
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih   86 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH   86 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence            89999999999999999999875  344444332     22222221 23588999999999988877775  5699998


Q ss_pred             cCCc----------------------hHHhhhhhc-CCCEEEEecccccccCCCCch------hccchhHHH-HHHHHHH
Q 022625          170 PSEG----------------------FISNAGSLK-GVQHVILLSQLSVYRGSGGIQ------ALMKGNARK-LAEQDES  219 (294)
Q Consensus       170 ~~~~----------------------~~~~~~~~~-gv~r~V~vSs~~~~~~~~~~~------~~~~~~~~~-~~~~ae~  219 (294)
                      .+..                      .+.++++.. ++++||++||+.+|+.+...+      ...+..+++ .+.++|.
T Consensus        87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~  166 (331)
T KOG0747|consen   87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEM  166 (331)
T ss_pred             hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHHH
Confidence            6211                      144455555 699999999999987543221      111222222 3456777


Q ss_pred             HHHh----CCCCEEEEEccceecCCCC----------------CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCc
Q 022625          220 MLMA----SGIPYTIIRTGVLQNTPGG----------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGL  279 (294)
Q Consensus       220 ~l~~----~gl~~tivRPg~l~~~~~~----------------~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~  279 (294)
                      ++++    .+++++++|.+.++ ||+.                +.....+.|.+..++++++|+++++-.++++ +..|+
T Consensus       167 ~v~Sy~~sy~lpvv~~R~nnVY-GP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K-g~~ge  244 (331)
T KOG0747|consen  167 LVRSYGRSYGLPVVTTRMNNVY-GPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK-GELGE  244 (331)
T ss_pred             HHHHHhhccCCcEEEEeccCcc-CCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc-CCccc
Confidence            7765    68999999999999 7762                2222345667778999999999999998888 77799


Q ss_pred             EEEEecCCc
Q 022625          280 IFEVCEISN  288 (294)
Q Consensus       280 ~~~v~~g~~  288 (294)
                      +|||+++.+
T Consensus       245 IYNIgtd~e  253 (331)
T KOG0747|consen  245 IYNIGTDDE  253 (331)
T ss_pred             eeeccCcch
Confidence            999998753

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.60  E-value=4.9e-14  Score=126.44  Aligned_cols=191  Identities=15%  Similarity=0.149  Sum_probs=124.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      ...+++++||||+|+||++++++|+++|++|+++.|++++....      ...++.++.+|++|.+++.++++       
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~   85 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG   85 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            45689999999999999999999999999999999987654322      12356788999999988877764       


Q ss_pred             CCcEEEEcCCc-------------h-------------HHhh----hhhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          163 GVRSIICPSEG-------------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       163 ~~d~Vi~~~~~-------------~-------------~~~~----~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      .+|++||+.+.             +             +..+    +.+.+ ++||++||..+..+......|..+|.. 
T Consensus        86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g~iv~iss~~~~~~~~~~~~Y~asK~a~  164 (264)
T PRK07576         86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-ASIIQISAPQAFVPMPMQAHVCAAKAGV  164 (264)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CEEEEECChhhccCCCCccHHHHHHHHH
Confidence            35999997321             0             1111    12222 699999998765544444445333321 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-----ce--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-----GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-----~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                       .+.+.....+...+++++.|+||.+.+.+....     ..  .+..........+++|+|+++++++..+.  ..|..+
T Consensus       165 ~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  244 (264)
T PRK07576        165 DMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYITGVVL  244 (264)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCccCCEE
Confidence             111222222334789999999998753221000     00  01011122346789999999999997643  467888


Q ss_pred             EEecCC
Q 022625          282 EVCEIS  287 (294)
Q Consensus       282 ~v~~g~  287 (294)
                      .+.++.
T Consensus       245 ~~~gg~  250 (264)
T PRK07576        245 PVDGGW  250 (264)
T ss_pred             EECCCc
Confidence            887764

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.60  E-value=6.5e-14  Score=122.67  Aligned_cols=185  Identities=15%  Similarity=0.149  Sum_probs=118.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc-chhh----h--cCCCcEEeecCCCCHHHHHHHhcC-------CcEE
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME----S--FGTYVESMAGDASNKKFLKTALRG-------VRSI  167 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~-~~~~----~--~~~~v~~v~~D~~d~~~l~~~l~~-------~d~V  167 (294)
                      ++|||++|+||+.++++|+++|++|+++.|+.. ....    .  .+..++++.+|++|.+++++++.+       +|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            589999999999999999999999999988752 2111    1  123578899999999988777653       5999


Q ss_pred             EEcCCc-----h---------------------HHhhh----hhcCCCEEEEecccccccCCCCchhccchhHH--HHHH
Q 022625          168 ICPSEG-----F---------------------ISNAG----SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE  215 (294)
Q Consensus       168 i~~~~~-----~---------------------~~~~~----~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~  215 (294)
                      ||+.+.     +                     +.+.+    .+.+.++||++||............|...+..  .+.+
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~  160 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTK  160 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHHH
Confidence            997221     0                     11222    23456799999997655443333444333321  1122


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCCCCcce----eeccCCCCCCCcCHHHHHHHHHHHhhCC--CCCCcEEEEecC
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPGGKQGF----QFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVCEI  286 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~----~~~~g~~~~~~Is~eDvA~~iv~aL~~~--~~~g~~~~v~~g  286 (294)
                      .....+...|++++++|||.+..........    .+........+.+++|+|++++.++...  ...|++|++.+|
T Consensus       161 ~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       161 SLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            2222334579999999999875321111000    0111112344678999999999888554  346899999655

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK12742 oxidoreductase; Provisional

Probab=99.59  E-value=8.1e-14  Score=122.28  Aligned_cols=190  Identities=13%  Similarity=0.146  Sum_probs=120.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-ccchhhhcC-CCcEEeecCCCCHHHHHHHhc---CCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMESFG-TYVESMAGDASNKKFLKTALR---GVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~-~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l~---~~d~Vi~~~  171 (294)
                      +.+|+|+||||+|+||++++++|+++|++|+++.|. .++..+... .+++++.+|++|.+++.+.++   .+|++||+.
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a   83 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA   83 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence            457999999999999999999999999999887663 333332211 246788899999988877765   369999983


Q ss_pred             Cc-----h---------------------H-Hhhhhh-cCCCEEEEecccccc-cCCCCchhccchhHHH--HHHHHHHH
Q 022625          172 EG-----F---------------------I-SNAGSL-KGVQHVILLSQLSVY-RGSGGIQALMKGNARK--LAEQDESM  220 (294)
Q Consensus       172 ~~-----~---------------------~-~~~~~~-~gv~r~V~vSs~~~~-~~~~~~~~~~~~~~~~--~~~~ae~~  220 (294)
                      +.     .                     + ..++.. .+..++|++||.... .+..+...|..+|...  +.+.....
T Consensus        84 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~  163 (237)
T PRK12742         84 GIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARD  163 (237)
T ss_pred             CCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHHHHH
Confidence            21     0                     0 011111 134699999997763 3334444554443311  11222222


Q ss_pred             HHhCCCCEEEEEccceecCCCCCcc-e--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          221 LMASGIPYTIIRTGVLQNTPGGKQG-F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       221 l~~~gl~~tivRPg~l~~~~~~~~~-~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      +...|+++++|+||.+......... .  ..........+.+++|+|+++.+++....  ..|..+.+.+|
T Consensus       164 ~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg  234 (237)
T PRK12742        164 FGPRGITINVVQPGPIDTDANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGA  234 (237)
T ss_pred             HhhhCeEEEEEecCcccCCccccccHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccCCEEEeCCC
Confidence            3447899999999988632211110 0  00001112345789999999999887654  36788888665

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1e-13  Score=123.47  Aligned_cols=190  Identities=12%  Similarity=0.022  Sum_probs=122.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHHhc-------CCcEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR-------GVRSII  168 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi  168 (294)
                      +.+++|+||||+|+||.+++++|+++|++|+++.|+..+...... ...+++.+|++|.++++++++       .+|++|
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   84 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF   84 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            567999999999999999999999999999999998765433211 123678899999998887775       469999


Q ss_pred             EcCCc---------------h-----------------HHhhhhhcCCCEEEEeccccccc-CCCCchhccchhHH--HH
Q 022625          169 CPSEG---------------F-----------------ISNAGSLKGVQHVILLSQLSVYR-GSGGIQALMKGNAR--KL  213 (294)
Q Consensus       169 ~~~~~---------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~-~~~~~~~~~~~~~~--~~  213 (294)
                      |+++.               +                 +...+++.+..++|++||..... ...+...|..+|+.  .+
T Consensus        85 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~~~  164 (255)
T PRK06057         85 NNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAM  164 (255)
T ss_pred             ECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHHHHHH
Confidence            97321               0                 11123344567899999865433 22233345443321  12


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCCccee-----e---ccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ-----F---EEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~-----~---~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                      .+.....+...|+++++|+||.+. .+.......     .   ........+.+++|+|+++..++....  ..+..+.+
T Consensus       165 ~~~l~~~~~~~gi~v~~i~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~  243 (255)
T PRK06057        165 SRELGVQFARQGIRVNALCPGPVN-TPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFITASTFLV  243 (255)
T ss_pred             HHHHHHHHHhhCcEEEEEeeCCcC-CchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEE
Confidence            222222334468999999999886 322111000     0   000112346789999999998886543  35788888


Q ss_pred             ecCC
Q 022625          284 CEIS  287 (294)
Q Consensus       284 ~~g~  287 (294)
                      .+|-
T Consensus       244 ~~g~  247 (255)
T PRK06057        244 DGGI  247 (255)
T ss_pred             CCCe
Confidence            7653

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.59  E-value=6.5e-14  Score=124.95  Aligned_cols=190  Identities=12%  Similarity=0.073  Sum_probs=124.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCHHHHHHHhc---CCcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR---GVRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l~---~~d~  166 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|++++..+.       .+..++++.+|++|.+++.++++   .+|+
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   84 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI   84 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence            4579999999999999999999999999999999988754432       12357889999999998887665   4699


Q ss_pred             EEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHHH
Q 022625          167 IICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA  214 (294)
Q Consensus       167 Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~  214 (294)
                      +||+.+.     +                         +...+.+.+-.++|++||.....+......|..++.  ..+.
T Consensus        85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~  164 (259)
T PRK06125         85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFT  164 (259)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHHHH
Confidence            9998221     0                         111234444568999998876554443333322221  1122


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCCCC-----------Ccce---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTPGG-----------KQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~~~-----------~~~~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      +.....+...|++++.|+||.+......           ....   .+........+.+++|+|.++++++....  ..|
T Consensus       165 ~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G  244 (259)
T PRK06125        165 RALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASPRSGYTSG  244 (259)
T ss_pred             HHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCchhccccC
Confidence            2222334457899999999987632100           0000   00011122345689999999999887543  468


Q ss_pred             cEEEEecC
Q 022625          279 LIFEVCEI  286 (294)
Q Consensus       279 ~~~~v~~g  286 (294)
                      ..+.+.+|
T Consensus       245 ~~i~vdgg  252 (259)
T PRK06125        245 TVVTVDGG  252 (259)
T ss_pred             ceEEecCC
Confidence            88888766

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.59  E-value=5.4e-14  Score=125.55  Aligned_cols=189  Identities=19%  Similarity=0.143  Sum_probs=123.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-----CCCcEEeecCCCCHHHHHHHhc-------CCcEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALR-------GVRSI  167 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~v~~v~~D~~d~~~l~~~l~-------~~d~V  167 (294)
                      |+++||||+++||++++++|+++|++|+++.|++++..+..     ...+.++.+|++|.++++++++       .+|++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            58999999999999999999999999999999876543321     1257889999999988877664       56999


Q ss_pred             EEcCCc-------h---------------------HH----hhhh-hcCCCEEEEecccccccCCCCchhccchhH--HH
Q 022625          168 ICPSEG-------F---------------------IS----NAGS-LKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK  212 (294)
Q Consensus       168 i~~~~~-------~---------------------~~----~~~~-~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~  212 (294)
                      ||+.+.       +                     +.    ..+. +.+..+||++||..+..+......|..+|.  ..
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~  160 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQ  160 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHH
Confidence            997321       0                     00    0112 234579999999887665544444533332  11


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCCCc--------ce--------eeccCCCCCCCcCHHHHHHHHHHHhhCCC-
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--------GF--------QFEEGCAANGSLSKEDAAFICVEALESIP-  275 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~--------~~--------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-  275 (294)
                      +.+.....+...|++++.|.||++........        ..        .+........+..++|+|+++++++..+. 
T Consensus       161 ~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~  240 (259)
T PRK08340        161 LAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENAE  240 (259)
T ss_pred             HHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcccc
Confidence            22222233445789999999998753211000        00        00001112335678999999999887643 


Q ss_pred             -CCCcEEEEecCCc
Q 022625          276 -QTGLIFEVCEISN  288 (294)
Q Consensus       276 -~~g~~~~v~~g~~  288 (294)
                       ..|.+..+.+|-.
T Consensus       241 ~itG~~i~vdgg~~  254 (259)
T PRK08340        241 YMLGSTIVFDGAMT  254 (259)
T ss_pred             cccCceEeecCCcC
Confidence             4688888877743

>PRK06194 hypothetical protein; Provisional

Probab=99.58  E-value=1.6e-13  Score=124.22  Aligned_cols=177  Identities=10%  Similarity=0.040  Sum_probs=113.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +.++++|||||+|+||++++++|+++|++|+++.|+.+.+.+..      +..++++.+|++|.+++.++++       .
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999875533221      2357789999999999888776       4


Q ss_pred             CcEEEEcCCc-----h-------------------------HHhhhhhcCC------CEEEEecccccccCCCCchhccc
Q 022625          164 VRSIICPSEG-----F-------------------------ISNAGSLKGV------QHVILLSQLSVYRGSGGIQALMK  207 (294)
Q Consensus       164 ~d~Vi~~~~~-----~-------------------------~~~~~~~~gv------~r~V~vSs~~~~~~~~~~~~~~~  207 (294)
                      +|+|||+++.     +                         +...+.+.+.      .++|++||..++.+......|..
T Consensus        84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  163 (287)
T PRK06194         84 VHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNV  163 (287)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHH
Confidence            6999998221     0                         0111333333      58999999877765555455544


Q ss_pred             hhHHH--HHHHHHHHHH--hCCCCEEEEEccceecCCCC----CcceeeccCCC---------------CCCCcCHHHHH
Q 022625          208 GNARK--LAEQDESMLM--ASGIPYTIIRTGVLQNTPGG----KQGFQFEEGCA---------------ANGSLSKEDAA  264 (294)
Q Consensus       208 ~~~~~--~~~~ae~~l~--~~gl~~tivRPg~l~~~~~~----~~~~~~~~g~~---------------~~~~Is~eDvA  264 (294)
                      +|...  +.+.....+.  ..+++++.+.||.+......    .....+..+..               ....++++|+|
T Consensus       164 sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dva  243 (287)
T PRK06194        164 SKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEEVA  243 (287)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHHHH
Confidence            43311  1111111112  24688889999987522110    00011111111               11347999999


Q ss_pred             HHHHHHhhC
Q 022625          265 FICVEALES  273 (294)
Q Consensus       265 ~~iv~aL~~  273 (294)
                      +.++..+..
T Consensus       244 ~~i~~~~~~  252 (287)
T PRK06194        244 QLVFDAIRA  252 (287)
T ss_pred             HHHHHHHHc
Confidence            999998854

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.58  E-value=1.3e-13  Score=122.90  Aligned_cols=190  Identities=17%  Similarity=0.048  Sum_probs=120.8

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCcc-----------ch---hh---hcCCCcEEeecCCCCHHHH
Q 022625           97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKR-----------NA---ME---SFGTYVESMAGDASNKKFL  157 (294)
Q Consensus        97 ~~~~~vlVtGatG--~IG~~l~~~L~~~g~~V~~~~R~~~-----------~~---~~---~~~~~v~~v~~D~~d~~~l  157 (294)
                      +.+++|+||||+|  +||..++++|+++|++|+++.|++.           ..   ..   ..+..++++.+|+++.+++
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            3578999999995  7999999999999999999998721           11   11   1124688999999999887


Q ss_pred             HHHhc-------CCcEEEEcCCc-----h---------------------HHhhh----hhcCCCEEEEecccccccCCC
Q 022625          158 KTALR-------GVRSIICPSEG-----F---------------------ISNAG----SLKGVQHVILLSQLSVYRGSG  200 (294)
Q Consensus       158 ~~~l~-------~~d~Vi~~~~~-----~---------------------~~~~~----~~~gv~r~V~vSs~~~~~~~~  200 (294)
                      .++++       .+|+|||+.+.     +                     +.+++    ...+.++||++||...+.+..
T Consensus        83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~  162 (256)
T PRK12748         83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMP  162 (256)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCC
Confidence            66654       46999998321     0                     11111    223456999999987766554


Q ss_pred             CchhccchhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcc-eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--
Q 022625          201 GIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG-FQFEEGCAANGSLSKEDAAFICVEALESIP--  275 (294)
Q Consensus       201 ~~~~~~~~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~-~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--  275 (294)
                      ....|..+|..-  +.+.....+...+++++.|+||.+......... ..+............+|+|+.+..++....  
T Consensus       163 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  242 (256)
T PRK12748        163 DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPKFPQGRVGEPVDAARLIAFLVSEEAKW  242 (256)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhccCCCCCCcCHHHHHHHHHHHhCccccc
Confidence            444554443311  111222223447899999999987632111110 001111112234578999999998886543  


Q ss_pred             CCCcEEEEecC
Q 022625          276 QTGLIFEVCEI  286 (294)
Q Consensus       276 ~~g~~~~v~~g  286 (294)
                      ..|+++++.+|
T Consensus       243 ~~g~~~~~d~g  253 (256)
T PRK12748        243 ITGQVIHSEGG  253 (256)
T ss_pred             ccCCEEEecCC
Confidence            45888888765

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.58  E-value=1.8e-13  Score=121.88  Aligned_cols=191  Identities=13%  Similarity=0.081  Sum_probs=124.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc--hhhh--cCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES--FGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~--~~~~--~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      .+.+|+++||||+|+||++++++|++.|++|+++.+....  ....  .+..+..+.+|++|.++++++++       .+
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   86 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHI   86 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4568999999999999999999999999999988765422  1111  13357889999999988887765       46


Q ss_pred             cEEEEcCCc-------------h-------------HHh----hhhhcC-CCEEEEecccccccCCCCchhccchhHH--
Q 022625          165 RSIICPSEG-------------F-------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       165 d~Vi~~~~~-------------~-------------~~~----~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      |++||+++.             +             +.+    .+.+.+ -.++|++||..+..+......|..+|..  
T Consensus        87 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  166 (253)
T PRK08993         87 DILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVM  166 (253)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHH
Confidence            999998321             0             111    122333 3689999998776655544455444431  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc----c--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----G--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                      .+.+.....+...|++++.|+||.+........    .  ..+........+..++|+|..+++++....  ..|..+.+
T Consensus       167 ~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~  246 (253)
T PRK08993        167 GVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYINGYTIAV  246 (253)
T ss_pred             HHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEE
Confidence            112222222344789999999999863221100    0  000111122346789999999999997654  46788877


Q ss_pred             ecC
Q 022625          284 CEI  286 (294)
Q Consensus       284 ~~g  286 (294)
                      .+|
T Consensus       247 dgg  249 (253)
T PRK08993        247 DGG  249 (253)
T ss_pred             CCC
Confidence            655

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.58  E-value=1.6e-13  Score=121.16  Aligned_cols=190  Identities=15%  Similarity=0.133  Sum_probs=123.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +.+++++||||+|+||+.+++.|+++|++|+++.|++++....      .+..+.++.+|+++.+++.++++       .
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4578999999999999999999999999999999987654322      13367889999999888766554       3


Q ss_pred             CcEEEEcCCch---------------------------------------HHhhhhhc-CCCEEEEecccccccCCCCch
Q 022625          164 VRSIICPSEGF---------------------------------------ISNAGSLK-GVQHVILLSQLSVYRGSGGIQ  203 (294)
Q Consensus       164 ~d~Vi~~~~~~---------------------------------------~~~~~~~~-gv~r~V~vSs~~~~~~~~~~~  203 (294)
                      +|+|||+.+..                                       ....+.+. .-.+||++||...+.. .+..
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~-~~~~  161 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN-MGQT  161 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC-CCCc
Confidence            69999983210                                       00011122 2357999998765432 2334


Q ss_pred             hccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-c---eeeccCCCCCCCcCHHHHHHHHHHHhhCCCCC
Q 022625          204 ALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G---FQFEEGCAANGSLSKEDAAFICVEALESIPQT  277 (294)
Q Consensus       204 ~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~---~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~  277 (294)
                      .|..+|..  .+.+.....+...+++++.++||.+........ .   ..+..........+.+|+|+++..++......
T Consensus       162 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  241 (253)
T PRK08217        162 NYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLGEPEEIAHTVRFIIENDYVT  241 (253)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHcCCCcC
Confidence            45443321  111222223345789999999999763221110 0   00111223344578999999999999765568


Q ss_pred             CcEEEEecCC
Q 022625          278 GLIFEVCEIS  287 (294)
Q Consensus       278 g~~~~v~~g~  287 (294)
                      |++|++.++-
T Consensus       242 g~~~~~~gg~  251 (253)
T PRK08217        242 GRVLEIDGGL  251 (253)
T ss_pred             CcEEEeCCCc
Confidence            8999998864

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.58  E-value=1.1e-13  Score=123.91  Aligned_cols=189  Identities=13%  Similarity=0.124  Sum_probs=125.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-------CCcEEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII  168 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi  168 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+..+..   ...+.++.+|++|.++++++++       .+|++|
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   82 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLV   82 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            456799999999999999999999999999999999876543   2357889999999988877664       469999


Q ss_pred             EcCCc-----------------h------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchh
Q 022625          169 CPSEG-----------------F------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGN  209 (294)
Q Consensus       169 ~~~~~-----------------~------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~  209 (294)
                      |+++.                 .                  +.+    .+.+.+..+||++||..+..+......|..+|
T Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (266)
T PRK06171         83 NNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATK  162 (266)
T ss_pred             ECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHHH
Confidence            97320                 0                  111    12234456899999987766555545554443


Q ss_pred             HH--HHHHHHHHHHHhCCCCEEEEEccceecCCC-C---Ccce-------------eecc--CCCCCCCcCHHHHHHHHH
Q 022625          210 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPG-G---KQGF-------------QFEE--GCAANGSLSKEDAAFICV  268 (294)
Q Consensus       210 ~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~-~---~~~~-------------~~~~--g~~~~~~Is~eDvA~~iv  268 (294)
                      ..  .+.+.....+...|+++++|+||.+...+. .   ....             .+..  .........++|||.++.
T Consensus       163 ~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~  242 (266)
T PRK06171        163 AALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVC  242 (266)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhhee
Confidence            31  122222233345799999999998742111 0   0000             0000  111233467899999999


Q ss_pred             HHhhCCC--CCCcEEEEecCC
Q 022625          269 EALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       269 ~aL~~~~--~~g~~~~v~~g~  287 (294)
                      +++....  ..|+++.+.+|.
T Consensus       243 fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        243 YLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             eeeccccccceeeEEEecCcc
Confidence            9887544  468888887663

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.58  E-value=8.2e-14  Score=137.95  Aligned_cols=192  Identities=14%  Similarity=0.160  Sum_probs=126.7

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEEcCccc------hh-hh------------c--------CCCc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRN------AM-ES------------F--------GTYV  144 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~R~~~~------~~-~~------------~--------~~~v  144 (294)
                      .-..+|+|+|||||||+|+.|+++|++.+.   +|++++|....      .. +.            .        ..++
T Consensus       115 ~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki  194 (605)
T PLN02503        115 EFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKL  194 (605)
T ss_pred             hhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccE
Confidence            344789999999999999999999998764   67999996532      10 10            0        1357


Q ss_pred             EEeecCCCCH------HHHHHHhcCCcEEEEcCCc-------------------hHHhhhhhc-CCCEEEEecccccccC
Q 022625          145 ESMAGDASNK------KFLKTALRGVRSIICPSEG-------------------FISNAGSLK-GVQHVILLSQLSVYRG  198 (294)
Q Consensus       145 ~~v~~D~~d~------~~l~~~l~~~d~Vi~~~~~-------------------~~~~~~~~~-gv~r~V~vSs~~~~~~  198 (294)
                      +++.+|++++      +..+.+.+++|+|||++..                   .+.+++++. ++++||++||..++..
T Consensus       195 ~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~  274 (605)
T PLN02503        195 VPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQ  274 (605)
T ss_pred             EEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecC
Confidence            8899999986      4566677889999998321                   144556565 5789999999877543


Q ss_pred             CC-Cch--hc------------------------------------c-------------------------chhHHHHH
Q 022625          199 SG-GIQ--AL------------------------------------M-------------------------KGNARKLA  214 (294)
Q Consensus       199 ~~-~~~--~~------------------------------------~-------------------------~~~~~~~~  214 (294)
                      .. ...  .|                                    .                         +..+...|
T Consensus       275 ~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK  354 (605)
T PLN02503        275 RQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTK  354 (605)
T ss_pred             CCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHH
Confidence            21 100  00                                    0                         00111234


Q ss_pred             HHHHHHHHh--CCCCEEEEEccceec---C--CC--CC------------cc---eeeccCCCCCCCcCHHHHHHHHHHH
Q 022625          215 EQDESMLMA--SGIPYTIIRTGVLQN---T--PG--GK------------QG---FQFEEGCAANGSLSKEDAAFICVEA  270 (294)
Q Consensus       215 ~~ae~~l~~--~gl~~tivRPg~l~~---~--~~--~~------------~~---~~~~~g~~~~~~Is~eDvA~~iv~a  270 (294)
                      ..+|..+++  .+++++||||+.+..   .  |+  .+            .+   ..+..++...+.|++|.|+.+++.+
T Consensus       355 ~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a  434 (605)
T PLN02503        355 AMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAA  434 (605)
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHH
Confidence            567888776  479999999998732   1  11  00            00   0122335567789999999999988


Q ss_pred             hhC-C---CCCCcEEEEecC
Q 022625          271 LES-I---PQTGLIFEVCEI  286 (294)
Q Consensus       271 L~~-~---~~~g~~~~v~~g  286 (294)
                      +.. .   ...+.+||++++
T Consensus       435 ~a~~~~~~~~~~~vYn~ts~  454 (605)
T PLN02503        435 MAKHGGAAKPEINVYQIASS  454 (605)
T ss_pred             HHhhhcccCCCCCEEEeCCC
Confidence            432 1   224789999987

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.58  E-value=8.9e-14  Score=121.60  Aligned_cols=184  Identities=14%  Similarity=0.103  Sum_probs=121.3

Q ss_pred             EEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-----CCCcEEeecCCCCHHHHHHHhcC---CcEEEEcCCc-
Q 022625          103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALRG---VRSIICPSEG-  173 (294)
Q Consensus       103 lVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~v~~v~~D~~d~~~l~~~l~~---~d~Vi~~~~~-  173 (294)
                      +||||+|+||+.++++|+++|++|+++.|++++.....     +.+++++.+|++|.+++.++++.   +|++||+.+. 
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            69999999999999999999999999999876544321     24688899999999999888864   6999998321 


Q ss_pred             ----h---------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHh-CCCC
Q 022625          174 ----F---------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA-SGIP  227 (294)
Q Consensus       174 ----~---------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~-~gl~  227 (294)
                          +                     +.++....+.++||++||..++.+......|..++..- ...++.+-.+ .+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~-~~~~~~la~e~~~ir  159 (230)
T PRK07041         81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAAL-EALARGLALELAPVR  159 (230)
T ss_pred             CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHH-HHHHHHHHHHhhCce
Confidence                0                     11122333567999999998876655555554433211 1111111111 3588


Q ss_pred             EEEEEccceecCCC-----CCccee---eccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 022625          228 YTIIRTGVLQNTPG-----GKQGFQ---FEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       228 ~tivRPg~l~~~~~-----~~~~~~---~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                      ++.++||.+.....     ......   ...........+++|+|++++.++.++...|+.|++.+|.
T Consensus       160 v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gg~  227 (230)
T PRK07041        160 VNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANGFTTGSTVLVDGGH  227 (230)
T ss_pred             EEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCCcCCcEEEeCCCe
Confidence            99999998652110     000000   0001111234578999999999998765678999988774

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.58  E-value=8.5e-14  Score=140.66  Aligned_cols=192  Identities=17%  Similarity=0.145  Sum_probs=127.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-------C-CCcEEeecCCCCHHHHHHHhc-----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------G-TYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~-~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.+.+....       + ..+..+.+|++|.+++.++++     
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            356799999999999999999999999999999999876543321       1 246788999999999888776     


Q ss_pred             --CCcEEEEcCCc-----h-------------------------HHhhhhhcC-CCEEEEecccccccCCCCchhccchh
Q 022625          163 --GVRSIICPSEG-----F-------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGN  209 (294)
Q Consensus       163 --~~d~Vi~~~~~-----~-------------------------~~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~  209 (294)
                        ++|++||+.+.     +                         +...+++.+ ..+||++||..+..+......|..+|
T Consensus       491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSK  570 (676)
T TIGR02632       491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAK  570 (676)
T ss_pred             cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHH
Confidence              57999998220     0                         011223333 35899999987665555555564444


Q ss_pred             HHH--HHHHHHHHHHhCCCCEEEEEccceecCCCC--Cc---------ce-------eeccCCCCCCCcCHHHHHHHHHH
Q 022625          210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGG--KQ---------GF-------QFEEGCAANGSLSKEDAAFICVE  269 (294)
Q Consensus       210 ~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~--~~---------~~-------~~~~g~~~~~~Is~eDvA~~iv~  269 (294)
                      ...  +.+.....+...|++++.|+|+.+..+.+.  ..         ..       .+........+++.+|+|+++++
T Consensus       571 aA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~  650 (676)
T TIGR02632       571 AAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFF  650 (676)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHH
Confidence            321  112222223346899999999987532210  00         00       01112223456889999999999


Q ss_pred             HhhCCC--CCCcEEEEecCC
Q 022625          270 ALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       270 aL~~~~--~~g~~~~v~~g~  287 (294)
                      ++....  ..|.++++.+|.
T Consensus       651 L~s~~~~~~TG~~i~vDGG~  670 (676)
T TIGR02632       651 LASSKSEKTTGCIITVDGGV  670 (676)
T ss_pred             HhCCcccCCcCcEEEECCCc
Confidence            886533  468999998774

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.57  E-value=2e-13  Score=120.56  Aligned_cols=192  Identities=15%  Similarity=0.114  Sum_probs=119.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHh-------cCCcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTAL-------RGVRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l-------~~~d~  166 (294)
                      ..+++++||||+|+||++++++|+++|++|++++|+.+...+.   .+..+.++++|++|.+.+.+++       ..+|+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4578999999999999999999999999999999987654332   2346788999999987765544       35799


Q ss_pred             EEEcCCc-----h---------------------HHhhhhh--cCCCEEEEecccccccCCCCchhccchhHHH--HHHH
Q 022625          167 IICPSEG-----F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQ  216 (294)
Q Consensus       167 Vi~~~~~-----~---------------------~~~~~~~--~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~  216 (294)
                      +||+.+.     +                     +.+++..  ....++|++||.....+......|..+|...  +.+.
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~  163 (249)
T PRK06500         84 VFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKT  163 (249)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHHHHHHHH
Confidence            9998321     0                     1122221  1235788888765543333334443333211  1111


Q ss_pred             HHHHHHhCCCCEEEEEccceecCCCC----Cc-ce-----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          217 DESMLMASGIPYTIIRTGVLQNTPGG----KQ-GF-----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       217 ae~~l~~~gl~~tivRPg~l~~~~~~----~~-~~-----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                      ....+...|++++++|||.+......    .. ..     .+........+.+.+|+|+++++++..+.  ..|..+.+.
T Consensus       164 la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~  243 (249)
T PRK06500        164 LSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVGSEIIVD  243 (249)
T ss_pred             HHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCeEEEC
Confidence            11122346899999999987632100    00 00     00011122234589999999999887544  457888887


Q ss_pred             cCCc
Q 022625          285 EISN  288 (294)
Q Consensus       285 ~g~~  288 (294)
                      +|..
T Consensus       244 gg~~  247 (249)
T PRK06500        244 GGMS  247 (249)
T ss_pred             CCcc
Confidence            7643

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.57  E-value=2.5e-13  Score=120.07  Aligned_cols=188  Identities=16%  Similarity=0.144  Sum_probs=117.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEE-cCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~-R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      +|+|+||||+|+||+.++++|+++|++|+++. |++++....      .+.++.++.+|++|.+++.++++       .+
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999998765 454433221      23468899999999988876654       57


Q ss_pred             cEEEEcCCc------h---------------------HHh-hhhhcC------CCEEEEecccccccCCC-Cchhccchh
Q 022625          165 RSIICPSEG------F---------------------ISN-AGSLKG------VQHVILLSQLSVYRGSG-GIQALMKGN  209 (294)
Q Consensus       165 d~Vi~~~~~------~---------------------~~~-~~~~~g------v~r~V~vSs~~~~~~~~-~~~~~~~~~  209 (294)
                      |++||+.+.      +                     +.. ++....      -.+||++||........ ....|..+|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK  161 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence            999998321      0                     111 111111      24699999976643322 223454444


Q ss_pred             HHH--HHHHHHHHHHhCCCCEEEEEccceecCCCC--Ccce---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGG--KQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       210 ~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~--~~~~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      ...  +.+.....+...++++++||||++......  +...   ............+++|+|+.+++++.++.  ..|+.
T Consensus       162 ~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~  241 (248)
T PRK06947        162 GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGAL  241 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCce
Confidence            321  111222223346899999999987632111  0000   00011111234689999999999988765  46888


Q ss_pred             EEEecC
Q 022625          281 FEVCEI  286 (294)
Q Consensus       281 ~~v~~g  286 (294)
                      +.+.+|
T Consensus       242 ~~~~gg  247 (248)
T PRK06947        242 LDVGGG  247 (248)
T ss_pred             EeeCCC
Confidence            887654

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.57  E-value=7.4e-14  Score=123.05  Aligned_cols=188  Identities=16%  Similarity=0.156  Sum_probs=116.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCccchhhh------cCCCcEEeecCCCCHHHHHHHhcC-------C
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALRG-------V  164 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~-~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~~-------~  164 (294)
                      +++++||||+|+||++++++|+++|++|+++ .|++++..+.      .+..++++.+|++|.++++++++.       +
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999999875 4665443222      123578899999999988887664       4


Q ss_pred             cEEEEcCCch---------------------------HHhh----hhhc---CCCEEEEecccccccCCCC-chhccchh
Q 022625          165 RSIICPSEGF---------------------------ISNA----GSLK---GVQHVILLSQLSVYRGSGG-IQALMKGN  209 (294)
Q Consensus       165 d~Vi~~~~~~---------------------------~~~~----~~~~---gv~r~V~vSs~~~~~~~~~-~~~~~~~~  209 (294)
                      |+|||+.+..                           +.+.    +.+.   +..+||++||..+..+... ...|..++
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            8999983210                           0001    1111   2357999999866543322 22343333


Q ss_pred             HH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce-----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          210 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF-----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       210 ~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~-----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      ..  .+.+.....+...+++++++|||.++.........     ............+++|+|+++++++..+.  ..|..
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~  240 (247)
T PRK09730        161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGSF  240 (247)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCcE
Confidence            21  11122222234468999999999987321111000     00001111123489999999999887543  56788


Q ss_pred             EEEecC
Q 022625          281 FEVCEI  286 (294)
Q Consensus       281 ~~v~~g  286 (294)
                      |.+.++
T Consensus       241 ~~~~g~  246 (247)
T PRK09730        241 IDLAGG  246 (247)
T ss_pred             EecCCC
Confidence            888765

>TIGR02415 23BDH acetoin reductases

Probab=99.57  E-value=1.3e-13  Score=122.22  Aligned_cols=187  Identities=18%  Similarity=0.135  Sum_probs=120.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      |+++||||+|+||..++++|+++|++|+++.|+.++..+.      .+..+.++.+|++|.+++.++++       .+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999999999986543322      13357889999999998877654       4699


Q ss_pred             EEEcCCc-----h-------------------------HHhhhhhcC-CCEEEEecccccccCCCCchhccchhHHH--H
Q 022625          167 IICPSEG-----F-------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARK--L  213 (294)
Q Consensus       167 Vi~~~~~-----~-------------------------~~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~  213 (294)
                      |||+.+.     +                         +...+++.+ .++||++||..+..+......|..++...  +
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  160 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGL  160 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHHH
Confidence            9998321     0                         011122323 26899999987655544455554443211  1


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCC------c--cee-------eccCCCCCCCcCHHHHHHHHHHHhhCCC--C
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGK------Q--GFQ-------FEEGCAANGSLSKEDAAFICVEALESIP--Q  276 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~------~--~~~-------~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~  276 (294)
                      .+.....+...++++++|+||.+.......      .  ...       +........+.+++|+++++.+++..+.  .
T Consensus       161 ~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  240 (254)
T TIGR02415       161 TQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYI  240 (254)
T ss_pred             HHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCc
Confidence            111122233468999999999875321100      0  000       0001112346789999999999998764  3


Q ss_pred             CCcEEEEecC
Q 022625          277 TGLIFEVCEI  286 (294)
Q Consensus       277 ~g~~~~v~~g  286 (294)
                      .|..+.+.+|
T Consensus       241 ~g~~~~~d~g  250 (254)
T TIGR02415       241 TGQSILVDGG  250 (254)
T ss_pred             cCcEEEecCC
Confidence            4677766654

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.57  E-value=8.4e-14  Score=125.62  Aligned_cols=185  Identities=17%  Similarity=0.169  Sum_probs=129.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc-------chhhhcC--CCcEEeecCCCCHHHHHHHhcC--CcEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-------NAMESFG--TYVESMAGDASNKKFLKTALRG--VRSI  167 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~-------~~~~~~~--~~v~~v~~D~~d~~~l~~~l~~--~d~V  167 (294)
                      .++||||||+|+||++.+.+|+++|+.|++++.=..       +......  ..+.++.+|+.|.+.+++.|+.  +|.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            579999999999999999999999999999864221       2233333  5899999999999999999975  5999


Q ss_pred             EEcCC--------------------c--hHHhhhhhcCCCEEEEecccccccCCC------------CchhccchhHHHH
Q 022625          168 ICPSE--------------------G--FISNAGSLKGVQHVILLSQLSVYRGSG------------GIQALMKGNARKL  213 (294)
Q Consensus       168 i~~~~--------------------~--~~~~~~~~~gv~r~V~vSs~~~~~~~~------------~~~~~~~~~~~~~  213 (294)
                      +|.++                    +  .+.+++++.+++++|+.||..+|..+.            +..+|..     .
T Consensus        82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~-----t  156 (343)
T KOG1371|consen   82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGK-----T  156 (343)
T ss_pred             EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchh-----h
Confidence            99621                    0  166778999999999999998876321            1122211     2


Q ss_pred             HHHHHHHHHh----CCCCEEEEEccceec---------CCCC-----------------------CcceeeccCCCCCCC
Q 022625          214 AEQDESMLMA----SGIPYTIIRTGVLQN---------TPGG-----------------------KQGFQFEEGCAANGS  257 (294)
Q Consensus       214 ~~~ae~~l~~----~gl~~tivRPg~l~~---------~~~~-----------------------~~~~~~~~g~~~~~~  257 (294)
                      +...|+.+..    .++..+.||-.....         .|..                       +.......|+.....
T Consensus       157 K~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdy  236 (343)
T KOG1371|consen  157 KKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDY  236 (343)
T ss_pred             hHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecc
Confidence            3345555443    567788888554331         1110                       000111134566788


Q ss_pred             cCHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          258 LSKEDAAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       258 Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      |++-|.|+..+.++....  ..-.+||+.++..
T Consensus       237 i~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g  269 (343)
T KOG1371|consen  237 IHVLDLADGHVAALGKLRGAAEFGVYNLGTGKG  269 (343)
T ss_pred             eeeEehHHHHHHHhhccccchheeeEeecCCCC
Confidence            999999999999998754  3346999998843

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.57  E-value=4.6e-13  Score=119.58  Aligned_cols=191  Identities=12%  Similarity=0.039  Sum_probs=124.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhh----h--cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME----S--FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~----~--~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      ..+|+++||||+|+||++++++|+++|++|+++.|+..+ ...    .  ...++.++.+|++|.+++.++++       
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   84 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG   84 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            568999999999999999999999999999998885432 111    1  12357788999999988877664       


Q ss_pred             CCcEEEEcCCc-----h-------------------------HHhhhhhcC-CCEEEEecccccccCCCCchhccchhHH
Q 022625          163 GVRSIICPSEG-----F-------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 ~~d~Vi~~~~~-----~-------------------------~~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      .+|++||+.+.     +                         +...+.+.+ -.++|++||.....+......|..+|..
T Consensus        85 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa  164 (261)
T PRK08936         85 TLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGG  164 (261)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHH
Confidence            46999998221     0                         111233333 3689999998776655555556444431


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc---e---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---F---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~---~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                        .+.+.....+...|++++.|+||.+.........   .   .+..........+.+|+|+.+.+++..+.  ..|..+
T Consensus       165 ~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  244 (261)
T PRK08936        165 VKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVTGITL  244 (261)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccCcEE
Confidence              1222222333457899999999987632211100   0   00011122345689999999999887543  467777


Q ss_pred             EEecCC
Q 022625          282 EVCEIS  287 (294)
Q Consensus       282 ~v~~g~  287 (294)
                      .+.+|.
T Consensus       245 ~~d~g~  250 (261)
T PRK08936        245 FADGGM  250 (261)
T ss_pred             EECCCc
Confidence            776663

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.56  E-value=3.3e-13  Score=119.23  Aligned_cols=188  Identities=15%  Similarity=0.157  Sum_probs=116.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-Cccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R-~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      +++++||||+|+||++++++|+++|++|++..+ ++++....      .+..+.++.+|++|.+++.++++       .+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999887764 33322211      12357789999999988887765       56


Q ss_pred             cEEEEcCCc------h---------------------HHhhhh----hc--C-CCEEEEecccccccCCCC-chhccchh
Q 022625          165 RSIICPSEG------F---------------------ISNAGS----LK--G-VQHVILLSQLSVYRGSGG-IQALMKGN  209 (294)
Q Consensus       165 d~Vi~~~~~------~---------------------~~~~~~----~~--g-v~r~V~vSs~~~~~~~~~-~~~~~~~~  209 (294)
                      |+|||+.+.      +                     +.+.+.    +.  + -.+||++||..+..+... ...|..+|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK  161 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence            999998210      0                     111111    11  1 247999999866443332 22354433


Q ss_pred             HHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcce-e----eccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF-Q----FEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       210 ~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~-~----~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      ..-  +.+.....+...++++++||||.+.......... .    +.......-..+++|+++++++++....  ..|+.
T Consensus       162 aa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~~  241 (248)
T PRK06123        162 GAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTGTF  241 (248)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCE
Confidence            311  1111222233468999999999987321111000 0    0011111122478999999999887643  46899


Q ss_pred             EEEecC
Q 022625          281 FEVCEI  286 (294)
Q Consensus       281 ~~v~~g  286 (294)
                      |++.++
T Consensus       242 ~~~~gg  247 (248)
T PRK06123        242 IDVSGG  247 (248)
T ss_pred             EeecCC
Confidence            999765

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.5e-13  Score=122.86  Aligned_cols=190  Identities=14%  Similarity=0.098  Sum_probs=123.9

Q ss_pred             cCCCCeEEEEcCCC-hHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cC-CCcEEeecCCCCHHHHHHHhc----
Q 022625           96 EEARDAVLVTDGDS-DIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG-~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~-~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      ...+++++||||+| +||+.++++|+++|++|+++.|+.++..+.       .+ ..+.++.+|+++.+++.++++    
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            34579999999997 799999999999999999999987654322       12 357889999999988877664    


Q ss_pred             ---CCcEEEEcCCc-------------h-----------------HHhhhhhcC-CCEEEEecccccccCCCCchhccch
Q 022625          163 ---GVRSIICPSEG-------------F-----------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       163 ---~~d~Vi~~~~~-------------~-----------------~~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                         .+|++||+.+.             +                 +...+...+ -.++|++||.....+..+...|..+
T Consensus        94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s  173 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAA  173 (262)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHH
Confidence               46999998321             0                 111223333 4689999987766555454455444


Q ss_pred             hHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-c----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCc
Q 022625          209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGL  279 (294)
Q Consensus       209 ~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~  279 (294)
                      |..  .+.+.....+...|+++++|+||.+........ .    ..+........+..++|+|+++++++....  ..|+
T Consensus       174 Kaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~itG~  253 (262)
T PRK07831        174 KAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLASDYSSYLTGE  253 (262)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCc
Confidence            331  111222222334789999999998763211100 0    001112222445689999999999887654  4678


Q ss_pred             EEEEec
Q 022625          280 IFEVCE  285 (294)
Q Consensus       280 ~~~v~~  285 (294)
                      ++.+.+
T Consensus       254 ~i~v~~  259 (262)
T PRK07831        254 VVSVSS  259 (262)
T ss_pred             eEEeCC
Confidence            887765

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.8e-13  Score=122.09  Aligned_cols=191  Identities=12%  Similarity=0.079  Sum_probs=120.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchh---hh--cCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES--FGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~---~~--~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      +.+++++||||+|+||+.++++|+++|++|+++.|+.....   +.  ....+.++.+|+++.+++.++++       ..
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   83 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI   83 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            45799999999999999999999999999999999864211   11  12357789999999988887765       46


Q ss_pred             cEEEEcCCc-----h---------------------HHh----hhhhcCCCEEEEecccccc-cCCCCchhccchhHH--
Q 022625          165 RSIICPSEG-----F---------------------ISN----AGSLKGVQHVILLSQLSVY-RGSGGIQALMKGNAR--  211 (294)
Q Consensus       165 d~Vi~~~~~-----~---------------------~~~----~~~~~gv~r~V~vSs~~~~-~~~~~~~~~~~~~~~--  211 (294)
                      |++||+.+.     +                     +.+    .+.+.+..+||++||.... .+......|..+|..  
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~  163 (263)
T PRK08226         84 DILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIV  163 (263)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHH
Confidence            999997221     0                     111    1233456799999987653 222333344333321  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCC--------cc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~--------~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                      .+.+.....+...+++++.|+||.+.......        ..    ..+..+.....+.+++|+|+++.+++....  ..
T Consensus       164 ~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~  243 (263)
T PRK08226        164 GLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLT  243 (263)
T ss_pred             HHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchhcCCc
Confidence            11111111223368999999999875321100        00    001111222335689999999999886543  46


Q ss_pred             CcEEEEecCC
Q 022625          278 GLIFEVCEIS  287 (294)
Q Consensus       278 g~~~~v~~g~  287 (294)
                      |+++.+.+|-
T Consensus       244 g~~i~~dgg~  253 (263)
T PRK08226        244 GTQNVIDGGS  253 (263)
T ss_pred             CceEeECCCc
Confidence            7888887663

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.2e-13  Score=122.64  Aligned_cols=189  Identities=16%  Similarity=0.168  Sum_probs=123.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      +|+++||||+|+||++++++|+++|++|++++|+.++..+.      .+..+.++.+|++|++++.++++       .+|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            48999999999999999999999999999999987654332      12468889999999988877654       569


Q ss_pred             EEEEcCCc-------------h-------------HHhhh----hhcC-CCEEEEecccccccCCCCchhccchhHH--H
Q 022625          166 SIICPSEG-------------F-------------ISNAG----SLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--K  212 (294)
Q Consensus       166 ~Vi~~~~~-------------~-------------~~~~~----~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~--~  212 (294)
                      ++||+.+.             +             +.+++    .+.+ ..+||++||.....+......|..+|+.  .
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~  160 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLA  160 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHH
Confidence            99998321             0             11122    2222 3689999998766554444455444431  1


Q ss_pred             HHHHHHHHHH-hCCCCEEEEEccceecCCCCCcce-------eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEE
Q 022625          213 LAEQDESMLM-ASGIPYTIIRTGVLQNTPGGKQGF-------QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE  282 (294)
Q Consensus       213 ~~~~ae~~l~-~~gl~~tivRPg~l~~~~~~~~~~-------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~  282 (294)
                      +.+.....+. ..|++++.|+||.+..........       .+........+...+|+|+++..++..+.  ..|..+.
T Consensus       161 ~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~  240 (252)
T PRK07677        161 MTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCIT  240 (252)
T ss_pred             HHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCCEEE
Confidence            2222222222 358999999999986321100000       00011122346689999999998886543  5688888


Q ss_pred             EecCC
Q 022625          283 VCEIS  287 (294)
Q Consensus       283 v~~g~  287 (294)
                      +.+|.
T Consensus       241 ~~gg~  245 (252)
T PRK07677        241 MDGGQ  245 (252)
T ss_pred             ECCCe
Confidence            87764

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.56  E-value=9.3e-14  Score=123.08  Aligned_cols=186  Identities=15%  Similarity=0.111  Sum_probs=117.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc-chhhh---cCCCcEEeecCCCCHHHHHHHhcCC---------c
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAMES---FGTYVESMAGDASNKKFLKTALRGV---------R  165 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~-~~~~~---~~~~v~~v~~D~~d~~~l~~~l~~~---------d  165 (294)
                      +|+++||||+|+||+.++++|+++|++|+++.|++. .+...   .+..++++.+|++|.++++++++.+         +
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS   80 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence            478999999999999999999999999999999873 22221   2346888999999998888777533         1


Q ss_pred             --EEEEcCCc------h-------------------------HHhhhhh-cCCCEEEEecccccccCCCCchhccchhHH
Q 022625          166 --SIICPSEG------F-------------------------ISNAGSL-KGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       166 --~Vi~~~~~------~-------------------------~~~~~~~-~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                        ++|++.+.      +                         +...+++ .+.++||++||..+..+......|..+|..
T Consensus        81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  160 (251)
T PRK06924         81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAG  160 (251)
T ss_pred             ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHH
Confidence              55654210      0                         1112233 235689999998777666555566554432


Q ss_pred             H--HHH-HH-HHHHHhCCCCEEEEEccceecCCCCC----cceee------ccCCCCCCCcCHHHHHHHHHHHhhCC-CC
Q 022625          212 K--LAE-QD-ESMLMASGIPYTIIRTGVLQNTPGGK----QGFQF------EEGCAANGSLSKEDAAFICVEALESI-PQ  276 (294)
Q Consensus       212 ~--~~~-~a-e~~l~~~gl~~tivRPg~l~~~~~~~----~~~~~------~~g~~~~~~Is~eDvA~~iv~aL~~~-~~  276 (294)
                      -  +.+ .+ |...+..+++++.|+||++.......    ....+      ........+.+++|+|+.++.++.++ ..
T Consensus       161 ~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  240 (251)
T PRK06924        161 LDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETEDFP  240 (251)
T ss_pred             HHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcccCC
Confidence            1  111 11 11122357999999999876321100    00000      00011234689999999999999873 35


Q ss_pred             CCcEEEEe
Q 022625          277 TGLIFEVC  284 (294)
Q Consensus       277 ~g~~~~v~  284 (294)
                      .|+.+.+.
T Consensus       241 ~G~~~~v~  248 (251)
T PRK06924        241 NGEVIDID  248 (251)
T ss_pred             CCCEeehh
Confidence            57766653

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.56  E-value=3.9e-14  Score=125.36  Aligned_cols=183  Identities=17%  Similarity=0.142  Sum_probs=127.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh----c-CCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----F-GTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~-~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ...+++|+||||.||||++||+.|..+|++|++++---......    . ...++.+..|+..+     ++.++|-|+|.
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD~IyhL   98 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEVDQIYHL   98 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHhhhhhhh
Confidence            34469999999999999999999999999999987533221111    1 13567777777654     67778888886


Q ss_pred             CC-----c-----------------hHHhhhhhcCCCEEEEecccccccCC----------CCchhccchhHHH-HHHHH
Q 022625          171 SE-----G-----------------FISNAGSLKGVQHVILLSQLSVYRGS----------GGIQALMKGNARK-LAEQD  217 (294)
Q Consensus       171 ~~-----~-----------------~~~~~~~~~gv~r~V~vSs~~~~~~~----------~~~~~~~~~~~~~-~~~~a  217 (294)
                      +.     +                 ++.-.|++.+ +||++.||..+|..+          +..++..+...+. -|+.+
T Consensus        99 Aapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~a  177 (350)
T KOG1429|consen   99 AAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVA  177 (350)
T ss_pred             ccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHH
Confidence            11     1                 1334567777 899999999887632          1112222222222 35566


Q ss_pred             HHHHH----hCCCCEEEEEccceecCCC------------------CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          218 ESMLM----ASGIPYTIIRTGVLQNTPG------------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       218 e~~l~----~~gl~~tivRPg~l~~~~~------------------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      |.++.    +.|+.+.|.|+-..+ ||.                  ......++.|.+..++.++.|+.+.++.+++.+.
T Consensus       178 E~L~~~y~k~~giE~rIaRifNty-GPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~  256 (350)
T KOG1429|consen  178 ETLCYAYHKQEGIEVRIARIFNTY-GPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDY  256 (350)
T ss_pred             HHHHHHhhcccCcEEEEEeeeccc-CCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCC
Confidence            66654    478999999998766 443                  3344567788999999999999999999887764


Q ss_pred             CCCcEEEEecCC
Q 022625          276 QTGLIFEVCEIS  287 (294)
Q Consensus       276 ~~g~~~~v~~g~  287 (294)
                      ..  -+||.+++
T Consensus       257 ~~--pvNiGnp~  266 (350)
T KOG1429|consen  257 RG--PVNIGNPG  266 (350)
T ss_pred             cC--CcccCCcc
Confidence            43  38998874

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.56  E-value=3.7e-13  Score=119.51  Aligned_cols=190  Identities=17%  Similarity=0.104  Sum_probs=119.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEE-cCccchhhh------cCCCcEEeecCCCCHHHHHHHhc--------
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMES------FGTYVESMAGDASNKKFLKTALR--------  162 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~-R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~--------  162 (294)
                      .+|+++||||+|+||++++++|+++|++|++.. |+.++..+.      .+..+..+.+|+++.+++..+++        
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            478999999999999999999999999998875 444433221      12346778899999876654331        


Q ss_pred             -----CCcEEEEcCC----c-h---------------------HHhhhhh--cCCCEEEEecccccccCCCCchhccchh
Q 022625          163 -----GVRSIICPSE----G-F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGN  209 (294)
Q Consensus       163 -----~~d~Vi~~~~----~-~---------------------~~~~~~~--~gv~r~V~vSs~~~~~~~~~~~~~~~~~  209 (294)
                           .+|++||+++    + +                     +..++..  .+..+||++||.....+......|..+|
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTK  162 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHHHH
Confidence                 5799999822    1 0                     1111111  1235999999998776555555565544


Q ss_pred             HHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCc--c-e--eecc-CCCCCCCcCHHHHHHHHHHHhhCCC--CCCc
Q 022625          210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--G-F--QFEE-GCAANGSLSKEDAAFICVEALESIP--QTGL  279 (294)
Q Consensus       210 ~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~--~-~--~~~~-g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~  279 (294)
                      ..-  +.+.....+...|++++.|+||++........  . .  .+.. ......+.+++|+|+++++++....  ..|+
T Consensus       163 aa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  242 (252)
T PRK12747        163 GAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQ  242 (252)
T ss_pred             HHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCccccCcCCc
Confidence            321  22222223345799999999998763211100  0 0  0000 0112346789999999999886543  4688


Q ss_pred             EEEEecCC
Q 022625          280 IFEVCEIS  287 (294)
Q Consensus       280 ~~~v~~g~  287 (294)
                      .+.+.+|.
T Consensus       243 ~i~vdgg~  250 (252)
T PRK12747        243 LIDVSGGS  250 (252)
T ss_pred             EEEecCCc
Confidence            88887663

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.56  E-value=3.1e-13  Score=120.80  Aligned_cols=188  Identities=16%  Similarity=0.123  Sum_probs=123.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+++++...   .+..+.++++|++|.++++++++       .+|+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4578999999999999999999999999999999998765433   23457889999999988877664       4699


Q ss_pred             EEEcCCc------------------h-------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          167 IICPSEG------------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       167 Vi~~~~~------------------~-------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      +||+.+-                  +             +..    .+++. -.++|++||...+.+..+...|..+|..
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sK~a  162 (263)
T PRK06200         84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTASKHA  162 (263)
T ss_pred             EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHHHHHH
Confidence            9998220                  1             011    12222 2689999998876655444455444431


Q ss_pred             H--HHHHHHHHHHhCCCCEEEEEccceecCCCCCc-------ce-e-------eccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-------GF-Q-------FEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       212 ~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-------~~-~-------~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      -  +.+.....+. .+++++.|.||++........       .. .       +..........+++|+|.++++++...
T Consensus       163 ~~~~~~~la~el~-~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~  241 (263)
T PRK06200        163 VVGLVRQLAYELA-PKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRR  241 (263)
T ss_pred             HHHHHHHHHHHHh-cCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhheeccc
Confidence            1  1111111222 359999999998753211100       00 0       000111233567899999999988755


Q ss_pred             -C--CCCcEEEEecC
Q 022625          275 -P--QTGLIFEVCEI  286 (294)
Q Consensus       275 -~--~~g~~~~v~~g  286 (294)
                       .  ..|+.+.+.+|
T Consensus       242 ~~~~itG~~i~vdgG  256 (263)
T PRK06200        242 NSRALTGVVINADGG  256 (263)
T ss_pred             ccCcccceEEEEcCc
Confidence             3  46888888766

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.7e-13  Score=123.37  Aligned_cols=174  Identities=17%  Similarity=0.085  Sum_probs=111.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------C-CCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------G-TYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~-~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      |+++||||+|+||++++++|+++|++|+++.|++++..+..      + ..+.++.+|++|.+++.++++       .+|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999999999999876543221      1 234557899999988766554       469


Q ss_pred             EEEEcCCc-----h---------------------HHhh----hhh-cCCCEEEEecccccccCCCCchhccchhH--HH
Q 022625          166 SIICPSEG-----F---------------------ISNA----GSL-KGVQHVILLSQLSVYRGSGGIQALMKGNA--RK  212 (294)
Q Consensus       166 ~Vi~~~~~-----~---------------------~~~~----~~~-~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~  212 (294)
                      ++||+.+.     +                     +.++    +.+ ....+||++||.....+......|..++.  ..
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  160 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRG  160 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHHH
Confidence            99998321     0                     1111    222 23469999999876554444445544442  11


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCCCcce----ee-------ccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF----QF-------EEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~----~~-------~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      +.+.....+...++++++|+||.+.. +......    ..       .........++++|+|+++++++.++
T Consensus       161 ~~~~l~~e~~~~~i~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~~  232 (272)
T PRK07832        161 LSEVLRFDLARHGIGVSVVVPGAVKT-PLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILAGVEKN  232 (272)
T ss_pred             HHHHHHHHhhhcCcEEEEEecCcccC-cchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHhcC
Confidence            22223333445789999999998863 2111000    00       00111234589999999999999653

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.55  E-value=2.6e-13  Score=121.16  Aligned_cols=191  Identities=15%  Similarity=0.005  Sum_probs=122.9

Q ss_pred             cCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCc-----------cch---hh---hcCCCcEEeecCCCCHHH
Q 022625           96 EEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK-----------RNA---ME---SFGTYVESMAGDASNKKF  156 (294)
Q Consensus        96 ~~~~~~vlVtGatG--~IG~~l~~~L~~~g~~V~~~~R~~-----------~~~---~~---~~~~~v~~v~~D~~d~~~  156 (294)
                      .+.+|+++||||+|  +||++++++|+++|++|++..|..           ++.   .+   ..+..+.++.+|++|.++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            35689999999994  899999999999999999875421           111   11   112357788999999988


Q ss_pred             HHHHhc-------CCcEEEEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCC
Q 022625          157 LKTALR-------GVRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGS  199 (294)
Q Consensus       157 l~~~l~-------~~d~Vi~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~  199 (294)
                      +.+++.       ..|++||+.+.             +                 +...+++.+-.+||++||.....+.
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  162 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPM  162 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCC
Confidence            877764       35999998220             0                 1122344445699999998776555


Q ss_pred             CCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce-eeccCCCCCCCcCHHHHHHHHHHHhhCCC-
Q 022625          200 GGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF-QFEEGCAANGSLSKEDAAFICVEALESIP-  275 (294)
Q Consensus       200 ~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-  275 (294)
                      .+...|..+|..  .+.+.....+...+++++.|+||.+.......... .+...........++|+|+++++++.... 
T Consensus       163 ~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~  242 (256)
T PRK12859        163 VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMFPFGRIGEPKDAARLIKFLASEEAE  242 (256)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            555555554432  12233333345578999999999976321111000 01011112234579999999999887643 


Q ss_pred             -CCCcEEEEecC
Q 022625          276 -QTGLIFEVCEI  286 (294)
Q Consensus       276 -~~g~~~~v~~g  286 (294)
                       ..|+++.+.+|
T Consensus       243 ~~~G~~i~~dgg  254 (256)
T PRK12859        243 WITGQIIHSEGG  254 (256)
T ss_pred             CccCcEEEeCCC
Confidence             46788887766

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.3e-13  Score=121.81  Aligned_cols=172  Identities=15%  Similarity=0.139  Sum_probs=113.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchh-hhcCCCcEEeecCCCCHHHHHHHhc-----------CCcE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALR-----------GVRS  166 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~v~~v~~D~~d~~~l~~~l~-----------~~d~  166 (294)
                      +++++||||+|+||++++++|+++|++|++++|+.++.. ...+.++.++.+|++|.+++++++.           ..|+
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL   80 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence            468999999999999999999999999999999875422 2223468889999999988877442           3588


Q ss_pred             EEEcCCc------h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHH
Q 022625          167 IICPSEG------F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE  215 (294)
Q Consensus       167 Vi~~~~~------~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~  215 (294)
                      +||+.+.      +                         +.+.+.+.+.++||++||..++.+..+...|..+|.     
T Consensus        81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~-----  155 (243)
T PRK07023         81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKA-----  155 (243)
T ss_pred             EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHH-----
Confidence            9987210      0                         112233455679999999887766655555544432     


Q ss_pred             HHHHHH------HhCCCCEEEEEccceecCCC-----CC-ccee----eccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          216 QDESML------MASGIPYTIIRTGVLQNTPG-----GK-QGFQ----FEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       216 ~ae~~l------~~~gl~~tivRPg~l~~~~~-----~~-~~~~----~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      ..+.++      ...+++++.|+||.+.....     .. ....    +..-......+..+|+|..++..|..+.
T Consensus       156 a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        156 ALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             HHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccc
Confidence            222222      23589999999998752110     00 0000    0000112346789999998777776654

>PRK07069 short chain dehydrogenase; Validated

Probab=99.55  E-value=2e-13  Score=120.72  Aligned_cols=186  Identities=9%  Similarity=0.077  Sum_probs=118.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-ccchhhh---c----C-CCcEEeecCCCCHHHHHHHhc-------CC
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES---F----G-TYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~-~~~~~~~---~----~-~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      +++||||+|+||+++++.|+++|++|+++.|+ .+++...   .    . ..+..+.+|++|.+++.++++       .+
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            48999999999999999999999999999998 4433221   1    1 124467899999988876654       56


Q ss_pred             cEEEEcCC----c---------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--H
Q 022625          165 RSIICPSE----G---------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K  212 (294)
Q Consensus       165 d~Vi~~~~----~---------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~  212 (294)
                      |+|||+.+    +         +                 +...+.+.+.++||++||..++.+......|..++..  .
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~  160 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS  160 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence            99999832    0         0                 1223455567899999998877655555555444431  1


Q ss_pred             HHHHHHHHHHh--CCCCEEEEEccceecCCCCCc--------ce-eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCc
Q 022625          213 LAEQDESMLMA--SGIPYTIIRTGVLQNTPGGKQ--------GF-QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL  279 (294)
Q Consensus       213 ~~~~ae~~l~~--~gl~~tivRPg~l~~~~~~~~--------~~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~  279 (294)
                      +.+.....+..  .+++++.|+||++........        .. .+..+.....+.+++|+|.+++.++..+.  ..|.
T Consensus       161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  240 (251)
T PRK07069        161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGA  240 (251)
T ss_pred             HHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccCC
Confidence            11222222222  358899999998763211100        00 01112222345689999999999876543  4677


Q ss_pred             EEEEecC
Q 022625          280 IFEVCEI  286 (294)
Q Consensus       280 ~~~v~~g  286 (294)
                      .+.+.+|
T Consensus       241 ~i~~~~g  247 (251)
T PRK07069        241 ELVIDGG  247 (251)
T ss_pred             EEEECCC
Confidence            7777655

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.55  E-value=6.9e-13  Score=119.64  Aligned_cols=183  Identities=15%  Similarity=0.109  Sum_probs=116.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch-------hh------hcCCCcEEeecCCCCHHHHHHHhc-
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------ME------SFGTYVESMAGDASNKKFLKTALR-  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~-------~~------~~~~~v~~v~~D~~d~~~l~~~l~-  162 (294)
                      +.+++++||||+|+||++++++|+++|++|+++.|+.++.       .+      ..+.++.++.+|+++.+++.++++ 
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            4578999999999999999999999999999999976431       10      112357889999999998887765 


Q ss_pred             ------CCcEEEEcCCc-------------h-------------HHh----hhhhcCCCEEEEecccccccCC--CCchh
Q 022625          163 ------GVRSIICPSEG-------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGS--GGIQA  204 (294)
Q Consensus       163 ------~~d~Vi~~~~~-------------~-------------~~~----~~~~~gv~r~V~vSs~~~~~~~--~~~~~  204 (294)
                            .+|++||+.+.             +             +.+    .+.+.+-.++|++||.....+.  .+...
T Consensus        84 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  163 (273)
T PRK08278         84 AVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTA  163 (273)
T ss_pred             HHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcch
Confidence                  57999998221             0             111    1233444689999987654443  33345


Q ss_pred             ccchhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          205 LMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       205 ~~~~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      |..+|..-  +.+.....+...+++++.|.||...+.+....  ..........+..++|+|+.+++++....  ..|+.
T Consensus       164 Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~--~~~~~~~~~~~~~p~~va~~~~~l~~~~~~~~~G~~  241 (273)
T PRK08278        164 YTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRN--LLGGDEAMRRSRTPEIMADAAYEILSRPAREFTGNF  241 (273)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHh--cccccccccccCCHHHHHHHHHHHhcCccccceeEE
Confidence            54443211  11222222334689999999995332321111  01111122346789999999999887643  34443


Q ss_pred             E
Q 022625          281 F  281 (294)
Q Consensus       281 ~  281 (294)
                      +
T Consensus       242 ~  242 (273)
T PRK08278        242 L  242 (273)
T ss_pred             E
Confidence            3

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.55  E-value=3.4e-13  Score=118.77  Aligned_cols=182  Identities=12%  Similarity=0.053  Sum_probs=116.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-------CCCcEEeecCCCC--HHHHHHH-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GTYVESMAGDASN--KKFLKTA-------  160 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~v~~v~~D~~d--~~~l~~~-------  160 (294)
                      +.+++++||||+|+||++++++|+++|++|+++.|++++.....       ...+.++.+|+.+  .+++.++       
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999987543321       1246678889875  3344333       


Q ss_pred             h-cCCcEEEEcCCc------------------h-------------HHhhhhhcCCCEEEEecccccccCCCCchhccch
Q 022625          161 L-RGVRSIICPSEG------------------F-------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       161 l-~~~d~Vi~~~~~------------------~-------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                      + ..+|+|||+.+.                  +             +...+.+.+..++|++||..+..+......|..+
T Consensus        84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  163 (239)
T PRK08703         84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGAS  163 (239)
T ss_pred             hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHh
Confidence            2 456999998321                  0             1112344456799999997766554444455444


Q ss_pred             hHHH--HHHHHHHHHHhC-CCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC--CCCCcEEE
Q 022625          209 NARK--LAEQDESMLMAS-GIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFE  282 (294)
Q Consensus       209 ~~~~--~~~~ae~~l~~~-gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~--~~~g~~~~  282 (294)
                      |..-  +.+.....+... ++++++|+||.+. .+....   ...+.....+...+|++..+++.+...  ...|++..
T Consensus       164 Kaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~-t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  238 (239)
T PRK08703        164 KAALNYLCKVAADEWERFGNLRANVLVPGPIN-SPQRIK---SHPGEAKSERKSYGDVLPAFVWWASAESKGRSGEIVY  238 (239)
T ss_pred             HHHHHHHHHHHHHHhccCCCeEEEEEecCccc-Cccccc---cCCCCCccccCCHHHHHHHHHHHhCccccCcCCeEee
Confidence            4311  111111112223 6999999999987 332111   112233345679999999999999742  34565543

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.54  E-value=3.9e-13  Score=119.88  Aligned_cols=189  Identities=11%  Similarity=0.049  Sum_probs=122.3

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCccch---hhhcCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA---MESFGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        97 ~~~~~vlVtGat--G~IG~~l~~~L~~~g~~V~~~~R~~~~~---~~~~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      +.+|+++||||+  ++||++++++|+++|++|++..|+....   .+.....+.++++|++|.++++++++       .+
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            467999999999  7999999999999999999999874211   11222357889999999988876553       46


Q ss_pred             cEEEEcCC--------c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          165 RSIICPSE--------G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       165 d~Vi~~~~--------~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                      |++||+.+        + +                         +...+.+  -.++|++||.....+......|..+|.
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~asKa  162 (252)
T PRK06079         85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGIAKA  162 (252)
T ss_pred             CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhhHHHHH
Confidence            99999721        1 0                         0111222  268999999876554444445544432


Q ss_pred             --HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCc----ce--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          211 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       211 --~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                        ..+.+.....+...|++++.|.||.+........    ..  .+........+..++|+|+++.+++....  ..|++
T Consensus       163 al~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~  242 (252)
T PRK06079        163 ALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLSTGVTGDI  242 (252)
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccccccE
Confidence              1122333333455799999999999863211100    00  00011112346789999999999987643  46888


Q ss_pred             EEEecCC
Q 022625          281 FEVCEIS  287 (294)
Q Consensus       281 ~~v~~g~  287 (294)
                      +.+.+|.
T Consensus       243 i~vdgg~  249 (252)
T PRK06079        243 IYVDKGV  249 (252)
T ss_pred             EEeCCce
Confidence            8887663

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.54  E-value=5.5e-13  Score=118.70  Aligned_cols=191  Identities=10%  Similarity=0.107  Sum_probs=124.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~-V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      ..+|+++||||+|+||+.++++|+++|++ |+++.|+.++....      .+..+.++.+|+++.+++.++++       
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            45799999999999999999999999999 99999987654321      12357788999999988877664       


Q ss_pred             CCcEEEEcCCc-----h---------------------HHhh----hhhcC-CCEEEEecccccccCCCCchhccchhHH
Q 022625          163 GVRSIICPSEG-----F---------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 ~~d~Vi~~~~~-----~---------------------~~~~----~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      ++|++||+.+.     +                     +.++    +.+.+ ..+||++||...+.+......|..+|..
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a  163 (260)
T PRK06198         84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGA  163 (260)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHH
Confidence            46999998321     0                     1111    22222 4689999998876655444455444321


Q ss_pred             H--HHHHHHHHHHhCCCCEEEEEccceecCCCCC-------cceeec----cCCCCCCCcCHHHHHHHHHHHhhCCC--C
Q 022625          212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-------QGFQFE----EGCAANGSLSKEDAAFICVEALESIP--Q  276 (294)
Q Consensus       212 ~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-------~~~~~~----~g~~~~~~Is~eDvA~~iv~aL~~~~--~  276 (294)
                      -  +.+.....+...+++++.++||++.......       ....+.    .......+++.+|+|++++.++.+..  .
T Consensus       164 ~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~  243 (260)
T PRK06198        164 LATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESGLM  243 (260)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhCCc
Confidence            1  1111112233467999999999876322100       000000    11122346799999999999887554  4


Q ss_pred             CCcEEEEecCC
Q 022625          277 TGLIFEVCEIS  287 (294)
Q Consensus       277 ~g~~~~v~~g~  287 (294)
                      .|+.+.+.++.
T Consensus       244 ~G~~~~~~~~~  254 (260)
T PRK06198        244 TGSVIDFDQSV  254 (260)
T ss_pred             cCceEeECCcc
Confidence            68888887763

>PRK06484 short chain dehydrogenase; Validated

Probab=99.54  E-value=3.8e-13  Score=131.83  Aligned_cols=196  Identities=13%  Similarity=0.083  Sum_probs=130.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      ...+|+++||||+++||++++++|+++|++|+++.|+++++.+.   .+..+..+.+|++|.++++++++       .+|
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  345 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD  345 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            45789999999999999999999999999999999987665432   23456778999999988877664       369


Q ss_pred             EEEEcCCc------h---------------------HHhhhhh--cCCCEEEEecccccccCCCCchhccchhHH--HHH
Q 022625          166 SIICPSEG------F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA  214 (294)
Q Consensus       166 ~Vi~~~~~------~---------------------~~~~~~~--~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~  214 (294)
                      ++||+++.      +                     +...+..  .+-.+||++||..+..+..+...|..+|..  .+.
T Consensus       346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~  425 (520)
T PRK06484        346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLS  425 (520)
T ss_pred             EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHH
Confidence            99997321      0                     1111111  234689999998877665555566554432  122


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCCCCCc----ce---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                      +.....+...|++++.|+||.+........    ..   .+..........+++|+|+++++++..+.  ..|+.+.+.+
T Consensus       426 ~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdg  505 (520)
T PRK06484        426 RSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVDG  505 (520)
T ss_pred             HHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence            222333445789999999998763211100    00   00011112335689999999999887543  5789999988


Q ss_pred             CCcccc
Q 022625          286 ISNLCE  291 (294)
Q Consensus       286 g~~~~~  291 (294)
                      |....+
T Consensus       506 g~~~~~  511 (520)
T PRK06484        506 GWTAFG  511 (520)
T ss_pred             CccCCC
Confidence            754443

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.53  E-value=5.7e-13  Score=121.69  Aligned_cols=178  Identities=15%  Similarity=0.158  Sum_probs=117.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cC--CCcEEeecCCCCHHHHHHHhc-------C
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~--~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      .+.+++++||||+|+||++++++|+++|++|+++.|+++++.+.   .+  ..+..+.+|++|.++++++++       .
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGG   85 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            45689999999999999999999999999999999998765432   22  245566799999988877654       4


Q ss_pred             CcEEEEcCCc-------------h-------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          164 VRSIICPSEG-------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       164 ~d~Vi~~~~~-------------~-------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      +|+|||+.+.             +             +.+    .+.+ +..+||++||..+..+......|..+|..  
T Consensus        86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~asKaal~  164 (296)
T PRK05872         86 IDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIE-RRGYVLQVSSLAAFAAAPGMAAYCASKAGVE  164 (296)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCEEEEEeCHhhcCCCCCchHHHHHHHHHH
Confidence            6999998321             0             111    1222 23689999998877665555556444431  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-ce-----eeccC--CCCCCCcCHHHHHHHHHHHhhCC
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GF-----QFEEG--CAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~~-----~~~~g--~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      .+.+.....+...|+.+++++||++........ ..     .+...  .......+.+|+|+++++++.+.
T Consensus       165 ~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~  235 (296)
T PRK05872        165 AFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERR  235 (296)
T ss_pred             HHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcC
Confidence            122222333445799999999998763211110 00     00000  11234578999999999999764

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.53  E-value=4.8e-13  Score=134.65  Aligned_cols=174  Identities=16%  Similarity=0.206  Sum_probs=121.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+..      +..+.++.+|++|.++++++++       
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            456789999999999999999999999999999999987644321      2368889999999998887775       


Q ss_pred             CCcEEEEcCCc---------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 GVRSIICPSEG---------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 ~~d~Vi~~~~~---------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                      .+|++||+++.               +                 +...+++.+..+||++||..++.+......|..+|.
T Consensus       448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  527 (657)
T PRK07201        448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKA  527 (657)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHH
Confidence            57999998321               0                 111234556789999999988765555455544443


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      .  .+.+.....+...|+++++|+||.+........ ..    ......++.+++|+.++..+.+.
T Consensus       528 a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~-~~----~~~~~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        528 ALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT-KR----YNNVPTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             HHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc-cc----ccCCCCCCHHHHHHHHHHHHHhC
Confidence            1  122222233345799999999999863221111 11    11234689999999999988653

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.53  E-value=5.9e-13  Score=121.07  Aligned_cols=191  Identities=15%  Similarity=0.071  Sum_probs=121.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc---------cchhhh------cCCCcEEeecCCCCHHHHHHHh
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---------RNAMES------FGTYVESMAGDASNKKFLKTAL  161 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~---------~~~~~~------~~~~v~~v~~D~~d~~~l~~~l  161 (294)
                      +.+|+++||||+++||++++++|+++|++|+++.|+.         +++.+.      .+..+.++.+|++|.+++.+++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            4679999999999999999999999999999988765         322211      1235778899999998877665


Q ss_pred             c-------CCcEEEEcCCc-----h---------------------HHh----hhhhc---C---CCEEEEecccccccC
Q 022625          162 R-------GVRSIICPSEG-----F---------------------ISN----AGSLK---G---VQHVILLSQLSVYRG  198 (294)
Q Consensus       162 ~-------~~d~Vi~~~~~-----~---------------------~~~----~~~~~---g---v~r~V~vSs~~~~~~  198 (294)
                      +       .+|++||+++.     +                     +..    .+.+.   +   ..+||++||..+..+
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~  163 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG  163 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence            3       45999997221     0                     111    11211   1   258999999877665


Q ss_pred             CCCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceee-cc-CCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          199 SGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQF-EE-GCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       199 ~~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~-~~-g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      ......|..+|..  .+.+.....+...|++++.|.|| +............ .. ........+++|+|.++++++...
T Consensus       164 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~~~~~~~~~~~~~~~pedva~~~~~L~s~~  242 (286)
T PRK07791        164 SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAEMMAKPEEGEFDAMAPENVSPLVVWLGSAE  242 (286)
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHHHHhcCcccccCCCCHHHHHHHHHHHhCch
Confidence            5555566554431  12233333345579999999998 3211111000000 00 011113568999999999988754


Q ss_pred             C--CCCcEEEEecCCc
Q 022625          275 P--QTGLIFEVCEISN  288 (294)
Q Consensus       275 ~--~~g~~~~v~~g~~  288 (294)
                      .  ..|+.+.+.+|..
T Consensus       243 ~~~itG~~i~vdgG~~  258 (286)
T PRK07791        243 SRDVTGKVFEVEGGKI  258 (286)
T ss_pred             hcCCCCcEEEEcCCce
Confidence            3  5788888877643

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.52  E-value=3.8e-13  Score=120.27  Aligned_cols=189  Identities=17%  Similarity=0.124  Sum_probs=120.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---CCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      +.+++++||||+|+||++++++|+++|++|+++.|+.+++.+..   +..+.++.+|++|.+++.++++       .+|+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            45799999999999999999999999999999999886654432   3357889999999887776654       4699


Q ss_pred             EEEcCCc------------------h-------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          167 IICPSEG------------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       167 Vi~~~~~------------------~-------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      +||+++.                  +             +.+    .+.+.+ .++|++||.....+......|..+|..
T Consensus        83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y~~sKaa  161 (262)
T TIGR03325        83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPLYTAAKHA  161 (262)
T ss_pred             EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCCCchhHHHHHH
Confidence            9998320                  0             011    122233 579999887766554444445433321


Q ss_pred             H--HHHHHHHHHHhCCCCEEEEEccceecCCCCCc-----c-----eee---ccC-CCCCCCcCHHHHHHHHHHHhhCC-
Q 022625          212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-----G-----FQF---EEG-CAANGSLSKEDAAFICVEALESI-  274 (294)
Q Consensus       212 ~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-----~-----~~~---~~g-~~~~~~Is~eDvA~~iv~aL~~~-  274 (294)
                      -  +.+.....+. ..++++.|.||++........     .     ...   ... .......+++|+|.++++++..+ 
T Consensus       162 ~~~l~~~la~e~~-~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~  240 (262)
T TIGR03325       162 VVGLVKELAFELA-PYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRGD  240 (262)
T ss_pred             HHHHHHHHHHhhc-cCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecCCC
Confidence            1  1111111122 239999999998763221100     0     000   001 11233567899999999988753 


Q ss_pred             C--CCCcEEEEecCC
Q 022625          275 P--QTGLIFEVCEIS  287 (294)
Q Consensus       275 ~--~~g~~~~v~~g~  287 (294)
                      .  ..|.++.+.+|.
T Consensus       241 ~~~~tG~~i~vdgg~  255 (262)
T TIGR03325       241 TVPATGAVLNYDGGM  255 (262)
T ss_pred             cccccceEEEecCCe
Confidence            2  368888887763

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.51  E-value=1.5e-12  Score=119.56  Aligned_cols=194  Identities=14%  Similarity=0.100  Sum_probs=121.3

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc-chhhh------cCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAMES------FGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~-~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|++..+... ...+.      .+..+.++.+|++|.+.+.++++     
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~   87 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL   87 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence            4456899999999999999999999999999999887532 22111      13367889999999988877664     


Q ss_pred             -CCcEEEEcCCc-------------h-------------HHhhh----hhc-------CCCEEEEecccccccCCCCchh
Q 022625          163 -GVRSIICPSEG-------------F-------------ISNAG----SLK-------GVQHVILLSQLSVYRGSGGIQA  204 (294)
Q Consensus       163 -~~d~Vi~~~~~-------------~-------------~~~~~----~~~-------gv~r~V~vSs~~~~~~~~~~~~  204 (294)
                       .+|++||+++.             +             +..++    ...       .-.+||++||.....+......
T Consensus        88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  167 (306)
T PRK07792         88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQAN  167 (306)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCch
Confidence             47999998221             0             11111    111       1258999999876554444445


Q ss_pred             ccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          205 LMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       205 ~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      |..+|..  .+.+.....+...|++++.|.|+.......................++++|+|.++++++....  ..|++
T Consensus       168 Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~~t~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~  247 (306)
T PRK07792        168 YGAAKAGITALTLSAARALGRYGVRANAICPRARTAMTADVFGDAPDVEAGGIDPLSPEHVVPLVQFLASPAAAEVNGQV  247 (306)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCCCCchhhhhccccchhhhhccCCCCHHHHHHHHHHHcCccccCCCCCE
Confidence            5444321  1122222233457899999999852211100000000000112345689999999999887543  57899


Q ss_pred             EEEecCCc
Q 022625          281 FEVCEISN  288 (294)
Q Consensus       281 ~~v~~g~~  288 (294)
                      |.+.+|..
T Consensus       248 ~~v~gg~~  255 (306)
T PRK07792        248 FIVYGPMV  255 (306)
T ss_pred             EEEcCCeE
Confidence            99987643

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.51  E-value=5e-13  Score=144.88  Aligned_cols=189  Identities=16%  Similarity=0.141  Sum_probs=127.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC----CeEEEEEcCccchhh--h--------------cCCCcEEeecCCCC-----
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAME--S--------------FGTYVESMAGDASN-----  153 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g----~~V~~~~R~~~~~~~--~--------------~~~~v~~v~~D~~d-----  153 (294)
                      .++|+||||+||+|++++++|++++    ++|++++|+......  .              ...+++++.+|+++     
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5799999999999999999999887    899999997543211  0              11368899999974     


Q ss_pred             -HHHHHHHhcCCcEEEEcCCc-------------------hHHhhhhhcCCCEEEEecccccccCCC-------------
Q 022625          154 -KKFLKTALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGSG-------------  200 (294)
Q Consensus       154 -~~~l~~~l~~~d~Vi~~~~~-------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~-------------  200 (294)
                       .+.+.++..++|+|||+...                   .+.+++.+.++++|+|+||.+++....             
T Consensus      1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~ 1130 (1389)
T TIGR03443      1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGG 1130 (1389)
T ss_pred             CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccC
Confidence             46677778899999998221                   144567778899999999987763210             


Q ss_pred             -Cch------hc---cchhHHHHHHHHHHHHHh---CCCCEEEEEccceecCCCCCcc----------------eeeccC
Q 022625          201 -GIQ------AL---MKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQG----------------FQFEEG  251 (294)
Q Consensus       201 -~~~------~~---~~~~~~~~~~~ae~~l~~---~gl~~tivRPg~l~~~~~~~~~----------------~~~~~g  251 (294)
                       ...      ..   ....+...|..+|.++..   .|++++++|||.+++....+..                ..++.+
T Consensus      1131 ~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~ 1210 (1389)
T TIGR03443      1131 AGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPNI 1210 (1389)
T ss_pred             CCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCCC
Confidence             000      00   000112234455665543   6899999999998832211110                012233


Q ss_pred             CCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          252 CAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       252 ~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      .....+++++|+|++++.++..+.  ..+.+||+.++.
T Consensus      1211 ~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~ 1248 (1389)
T TIGR03443      1211 NNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHP 1248 (1389)
T ss_pred             CCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCC
Confidence            445788999999999999987654  235689998873

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.51  E-value=3e-13  Score=124.63  Aligned_cols=137  Identities=19%  Similarity=0.237  Sum_probs=100.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccc------hhh----------hcCCCcEEeecCCC------CHHH
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN------AME----------SFGTYVESMAGDAS------NKKF  156 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~------~~~----------~~~~~v~~v~~D~~------d~~~  156 (294)
                      ++|++||||||+|.+++..|+.+- .+|++++|..+.      +..          ...+.++++.+|+.      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            579999999999999999999875 499999996641      111          22357999999998      4477


Q ss_pred             HHHHhcCCcEEEEcCCc-------------------hHHhhhhhcCCCEEEEecccccccCCC-----------------
Q 022625          157 LKTALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGSG-----------------  200 (294)
Q Consensus       157 l~~~l~~~d~Vi~~~~~-------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~-----------------  200 (294)
                      +.++.+.+|.|||+..-                   .+..+|...+.|.+.|+||.++.....                 
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~  160 (382)
T COG3320          81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNV  160 (382)
T ss_pred             HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccc
Confidence            88888999999998220                   155567777889999999998754211                 


Q ss_pred             ---CchhccchhHHHHHHHHHHHHHh---CCCCEEEEEccceecCCC
Q 022625          201 ---GIQALMKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNTPG  241 (294)
Q Consensus       201 ---~~~~~~~~~~~~~~~~ae~~l~~---~gl~~tivRPg~l~~~~~  241 (294)
                         ....|..+|+     .+|..+++   .|++++|+|||++.....
T Consensus       161 ~~~~~~GY~~SKw-----vaE~Lvr~A~~rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         161 GQGLAGGYGRSKW-----VAEKLVREAGDRGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             cCccCCCcchhHH-----HHHHHHHHHhhcCCCeEEEecCeeeccCc
Confidence               1123444433     56766665   689999999999885443

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.51  E-value=1.3e-12  Score=115.66  Aligned_cols=183  Identities=11%  Similarity=0.101  Sum_probs=116.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-------CCCcEEeecCCC--CHHHHHHH------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GTYVESMAGDAS--NKKFLKTA------  160 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~v~~v~~D~~--d~~~l~~~------  160 (294)
                      ...+++++||||+|+||..++++|+++|++|++++|+.++..+..       ...++++.+|++  +.+.+.++      
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999876533221       135677788885  55444333      


Q ss_pred             -hcCCcEEEEcCCc------h---------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccch
Q 022625          161 -LRGVRSIICPSEG------F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       161 -l~~~d~Vi~~~~~------~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                       +..+|+|||+++.      +                     +.+    .+.+.+.++||++||.....+......|..+
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  168 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVS  168 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHH
Confidence             3467999997321      0                     111    2345677899999998765544444455443


Q ss_pred             hHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEE
Q 022625          209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE  282 (294)
Q Consensus       209 ~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~  282 (294)
                      |...  +.+.....+...++++++++||.+........   + .......+...+|++..+++++.++.  ..|+++.
T Consensus       169 K~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  242 (247)
T PRK08945        169 KFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASA---F-PGEDPQKLKTPEDIMPLYLYLMGDDSRRKNGQSFD  242 (247)
T ss_pred             HHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhh---c-CcccccCCCCHHHHHHHHHHHhCccccccCCeEEe
Confidence            3211  11111112233689999999998763211110   1 11122456899999999999886544  3455543

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.51  E-value=1.9e-12  Score=115.42  Aligned_cols=190  Identities=13%  Similarity=0.080  Sum_probs=115.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc----chhhh------cCCCcEEeecCCCCHHHHHHHhc----
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----NAMES------FGTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~----~~~~~------~~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      +.+|+++||||+|+||.+++++|+++|++|+++.++..    ...+.      .+..++++++|++|.++++++++    
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999877765432    11111      12367889999999999887765    


Q ss_pred             ---CCcEEEEcCCc-----h---------------------HHhhhhh-c-CCCEEEEe-cccccccCCCCchhccchhH
Q 022625          163 ---GVRSIICPSEG-----F---------------------ISNAGSL-K-GVQHVILL-SQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 ---~~d~Vi~~~~~-----~---------------------~~~~~~~-~-gv~r~V~v-Ss~~~~~~~~~~~~~~~~~~  210 (294)
                         .+|++||+.+.     +                     +...+.. . ...+++++ ||.... .......|..+|.
T Consensus        86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-~~~~~~~Y~~sK~  164 (257)
T PRK12744         86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-FTPFYSAYAGSKA  164 (257)
T ss_pred             hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc-cCCCcccchhhHH
Confidence               46999998321     0                     1111111 1 12467766 443222 2223344544443


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCC---CCcc-eee----ccCC--CCCCCcCHHHHHHHHHHHhhCCC-CC
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPG---GKQG-FQF----EEGC--AANGSLSKEDAAFICVEALESIP-QT  277 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~---~~~~-~~~----~~g~--~~~~~Is~eDvA~~iv~aL~~~~-~~  277 (294)
                      .  .+.+.....+...|+++++++||.+.....   .... ..+    ....  ......+++|+|.++.+++.... ..
T Consensus       165 a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  244 (257)
T PRK12744        165 PVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTDGWWIT  244 (257)
T ss_pred             HHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcccceee
Confidence            1  112222222334689999999999763211   0000 000    0011  11256789999999999998532 35


Q ss_pred             CcEEEEecCC
Q 022625          278 GLIFEVCEIS  287 (294)
Q Consensus       278 g~~~~v~~g~  287 (294)
                      |+++.+.+|.
T Consensus       245 g~~~~~~gg~  254 (257)
T PRK12744        245 GQTILINGGY  254 (257)
T ss_pred             cceEeecCCc
Confidence            8899988764

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.50  E-value=1.3e-12  Score=117.62  Aligned_cols=184  Identities=18%  Similarity=0.174  Sum_probs=119.4

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCC-cEEeecCCCCHHHHHHHh----
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTY-VESMAGDASNKKFLKTAL----  161 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~-v~~v~~D~~d~~~l~~~l----  161 (294)
                      .+...+|+|+|||||.+||.+++.+|+++|.+++++.|..++++..       .+.. +..+++|++|.+++++++    
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999998877654332       2334 999999999999988664    


Q ss_pred             ---cCCcEEEEcCC----ch--------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccch
Q 022625          162 ---RGVRSIICPSE----GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       162 ---~~~d~Vi~~~~----~~--------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                         .++|++||+++    ++                          ....+++.+-.|||.+||..+..+.+....|..+
T Consensus        87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~AS  166 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSAS  166 (282)
T ss_pred             HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchH
Confidence               46799999832    10                          1123556666899999999887665554455444


Q ss_pred             hHH--HHHHHHHHHHHhCCCCEE-EEEccceecCCCCCcceeeccC-CCCCCCcCHHHHHH--HHHHHhhCCCCCC
Q 022625          209 NAR--KLAEQDESMLMASGIPYT-IIRTGVLQNTPGGKQGFQFEEG-CAANGSLSKEDAAF--ICVEALESIPQTG  278 (294)
Q Consensus       209 ~~~--~~~~~ae~~l~~~gl~~t-ivRPg~l~~~~~~~~~~~~~~g-~~~~~~Is~eDvA~--~iv~aL~~~~~~g  278 (294)
                      |..  .+.+.....+...+..+. +|.||++.......... ...+ .........+|++.  .+..++..+...+
T Consensus       167 K~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  241 (282)
T KOG1205|consen  167 KHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGKELL-GEEGKSQQGPFLRTEDVADPEAVAYAISTPPCRQ  241 (282)
T ss_pred             HHHHHHHHHHHHHHhhccCceEEEEEecCceeecccchhhc-cccccccccchhhhhhhhhHHHHHHHHhcCcccc
Confidence            431  122223333333443332 69999987432221111 1111 23344556677755  7777777765433

>PRK05855 short chain dehydrogenase; Validated

Probab=99.50  E-value=9.2e-13  Score=129.97  Aligned_cols=178  Identities=19%  Similarity=0.190  Sum_probs=119.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      ..+++++||||+|+||++++++|+++|++|+++.|+.+++.+.      .+..+.++.+|++|.+++.++++       .
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            4568999999999999999999999999999999987664432      12367889999999998877765       3


Q ss_pred             CcEEEEcCCc-----h-------------------------HHhhhhhcC-CCEEEEecccccccCCCCchhccchhHHH
Q 022625          164 VRSIICPSEG-----F-------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARK  212 (294)
Q Consensus       164 ~d~Vi~~~~~-----~-------------------------~~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~~  212 (294)
                      +|++||+++-     +                         +...+.+.+ -.+||++||..++.+......|..+|..-
T Consensus       393 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~  472 (582)
T PRK05855        393 PDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAV  472 (582)
T ss_pred             CcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHH
Confidence            6999998321     0                         111123333 36999999998887666666665554321


Q ss_pred             --HHHHHHHHHHhCCCCEEEEEccceecCCCCCccee-ec-----------cCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ-FE-----------EGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       213 --~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~-~~-----------~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                        +.+.....+...|+++++|+||++........... ..           .........+.+|+|+.+++++.+.
T Consensus       473 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~  548 (582)
T PRK05855        473 LMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRN  548 (582)
T ss_pred             HHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcC
Confidence              22222233445799999999998763211110000 00           0000112358899999999999864

>PRK05599 hypothetical protein; Provisional

Probab=99.50  E-value=1.4e-12  Score=115.87  Aligned_cols=168  Identities=16%  Similarity=0.124  Sum_probs=112.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------C-CCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------G-TYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~-~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      |+++||||+++||++++++|+ +|++|+++.|+++++.+..      + ..+.++.+|++|.++++++++       .+|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            679999999999999999998 5999999999887654321      1 247889999999988876553       469


Q ss_pred             EEEEcCCc-----h-------------------------HHhhhhhcC-CCEEEEecccccccCCCCchhccchhHH--H
Q 022625          166 SIICPSEG-----F-------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--K  212 (294)
Q Consensus       166 ~Vi~~~~~-----~-------------------------~~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~--~  212 (294)
                      ++||+.+-     .                         +...+.+.+ -.+||++||..+..+......|..+|..  .
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~  159 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDA  159 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHH
Confidence            99987210     0                         011233332 3689999998776555445556554431  1


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      +.+.....+...|++++.+.||.+.........      .. ....+++|+|+.+++.+....
T Consensus       160 ~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~------~~-~~~~~pe~~a~~~~~~~~~~~  215 (246)
T PRK05599        160 FCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK------PA-PMSVYPRDVAAAVVSAITSSK  215 (246)
T ss_pred             HHHHHHHHhcCCCceEEEecCCcccchhhcCCC------CC-CCCCCHHHHHHHHHHHHhcCC
Confidence            222333334557899999999998632211100      00 113589999999999998753

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.50  E-value=1.1e-12  Score=118.79  Aligned_cols=187  Identities=15%  Similarity=0.100  Sum_probs=120.3

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCcc---chhhh---cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES---FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        97 ~~~~~vlVtGat--G~IG~~l~~~L~~~g~~V~~~~R~~~---~~~~~---~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      +.+|+++||||+  ++||++++++|+++|++|++..|+.+   .+.+.   .+.. .++.+|++|.+++.++++      
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~   81 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDL   81 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHc
Confidence            457999999997  79999999999999999999998852   22221   2223 578899999988877653      


Q ss_pred             -CCcEEEEcCC--------c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccc
Q 022625          163 -GVRSIICPSE--------G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK  207 (294)
Q Consensus       163 -~~d~Vi~~~~--------~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~  207 (294)
                       .+|++||+++        + +                         +...+.+ + .+||++||.....+......|..
T Consensus        82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-~-g~Iv~isS~~~~~~~~~~~~Y~a  159 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND-G-ASVLTLSYLGGVKYVPHYNVMGV  159 (274)
T ss_pred             CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc-C-CcEEEEecCCCccCCCcchhhhh
Confidence             4599999832        1 0                         1111222 2 58999999876554444444544


Q ss_pred             hhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCC--c-c--eeecc-CCCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          208 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--Q-G--FQFEE-GCAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       208 ~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~--~-~--~~~~~-g~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                      +|+.  .+.+.....+...|++++.|.||++.......  . .  ..+.. ......+..++|+|+++++++....  ..
T Consensus       160 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~~~it  239 (274)
T PRK08415        160 AKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSSGVT  239 (274)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhhhccc
Confidence            4431  22233333345579999999999876311100  0 0  00000 1111335688999999999997543  46


Q ss_pred             CcEEEEecC
Q 022625          278 GLIFEVCEI  286 (294)
Q Consensus       278 g~~~~v~~g  286 (294)
                      |+.+.+.+|
T Consensus       240 G~~i~vdGG  248 (274)
T PRK08415        240 GEIHYVDAG  248 (274)
T ss_pred             ccEEEEcCc
Confidence            788888766

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.49  E-value=1.4e-12  Score=114.35  Aligned_cols=174  Identities=13%  Similarity=0.099  Sum_probs=116.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHHhc----CCcEEEEcCC--
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR----GVRSIICPSE--  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l~----~~d~Vi~~~~--  172 (294)
                      |+++||||+|+||++++++|+++|++|+++.|+.+++.+... .+++++++|++|.++++++++    .+|++||+.+  
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~   80 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS   80 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence            479999999999999999999999999999999876554322 246788999999999888775    5799999721  


Q ss_pred             ---------ch------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHHHHHH
Q 022625          173 ---------GF------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQD  217 (294)
Q Consensus       173 ---------~~------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~~a  217 (294)
                               .+                        +...+++  -.+||++||...  +  ....|..+|+  ..+.+..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~--~--~~~~Y~asKaal~~~~~~l  154 (223)
T PRK05884         81 WDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPENP--P--AGSAEAAIKAALSNWTAGQ  154 (223)
T ss_pred             ccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCCC--C--CccccHHHHHHHHHHHHHH
Confidence                     00                        0001222  268999998751  1  1234433332  1222333


Q ss_pred             HHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          218 ESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       218 e~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      ...+...|++++.|.||++........      ..  ...-..+|+|+.+.+++..+.  ..|+++.+.+|.
T Consensus       155 a~e~~~~gI~v~~v~PG~v~t~~~~~~------~~--~p~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdgg~  218 (223)
T PRK05884        155 AAVFGTRGITINAVACGRSVQPGYDGL------SR--TPPPVAAEIARLALFLTTPAARHITGQTLHVSHGA  218 (223)
T ss_pred             HHHhhhcCeEEEEEecCccCchhhhhc------cC--CCCCCHHHHHHHHHHHcCchhhccCCcEEEeCCCe
Confidence            334455789999999998762211100      01  112378999999999887543  467888886653

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.49  E-value=1.3e-12  Score=116.84  Aligned_cols=190  Identities=13%  Similarity=0.101  Sum_probs=120.9

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCc---cchhhh---c-CCCcEEeecCCCCHHHHHHHhc-----
Q 022625           97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDK---RNAMES---F-GTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        97 ~~~~~vlVtGat--G~IG~~l~~~L~~~g~~V~~~~R~~---~~~~~~---~-~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      +.+|+++||||+  ++||++++++|+++|++|+++.|+.   +.+.+.   . +..+.++++|++|.++++++++     
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE   84 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence            467999999997  8999999999999999999987753   222221   1 2357789999999988877664     


Q ss_pred             --CCcEEEEcCC--------c-h---------------------HHhhhhh--cCCCEEEEecccccccCCCCchhccch
Q 022625          163 --GVRSIICPSE--------G-F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       163 --~~d~Vi~~~~--------~-~---------------------~~~~~~~--~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                        .+|++||+.+        + +                     +...+..  ..-.+||++||..+..+......|..+
T Consensus        85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  164 (257)
T PRK08594         85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGVA  164 (257)
T ss_pred             CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCchhHHH
Confidence              3599998721        1 0                     0011110  112589999998776554444455444


Q ss_pred             hHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-c--e---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G--F---QFEEGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       209 ~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~--~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      |.-  .+.+.....+...|++++.|.||.+........ .  .   ..........+.+++|+|+++++++....  ..|
T Consensus       165 Kaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~~~~tG  244 (257)
T PRK08594        165 KASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDLSRGVTG  244 (257)
T ss_pred             HHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCcccccccc
Confidence            431  122333334455799999999998763211000 0  0   00001112335688999999999887543  467


Q ss_pred             cEEEEecC
Q 022625          279 LIFEVCEI  286 (294)
Q Consensus       279 ~~~~v~~g  286 (294)
                      +.+.+.+|
T Consensus       245 ~~~~~dgg  252 (257)
T PRK08594        245 ENIHVDSG  252 (257)
T ss_pred             eEEEECCc
Confidence            88887665

>PLN02778 3,5-epimerase/4-reductase

Probab=99.49  E-value=2.3e-12  Score=118.02  Aligned_cols=173  Identities=12%  Similarity=0.085  Sum_probs=106.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEcCC---
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE---  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~---  172 (294)
                      ..|+||||||+||||++|+++|+++|++|+...                  .|+.|.+.+...++  ++|+|||+++   
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~   69 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------GRLENRASLEADIDAVKPTHVFNAAGVTG   69 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------CccCCHHHHHHHHHhcCCCEEEECCcccC
Confidence            458999999999999999999999999986421                  34556666766666  6799999821   


Q ss_pred             --c---h-----------------HHhhhhhcCCCEEEEecccccccCC-------C-Cch----hccchhHH-HHHHHH
Q 022625          173 --G---F-----------------ISNAGSLKGVQHVILLSQLSVYRGS-------G-GIQ----ALMKGNAR-KLAEQD  217 (294)
Q Consensus       173 --~---~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~-------~-~~~----~~~~~~~~-~~~~~a  217 (294)
                        .   .                 +.++|++.|+++++ +||..++...       . +..    +..+...+ ..|..+
T Consensus        70 ~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~-~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~  148 (298)
T PLN02778         70 RPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTN-YATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMV  148 (298)
T ss_pred             CCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEE-EecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHH
Confidence              0   0                 45567888987554 5554443210       0 011    01111122 346678


Q ss_pred             HHHHHhCCCCEEEEEccceec-CCCCCcce--eeccCC----CCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cc
Q 022625          218 ESMLMASGIPYTIIRTGVLQN-TPGGKQGF--QFEEGC----AANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-NL  289 (294)
Q Consensus       218 e~~l~~~gl~~tivRPg~l~~-~~~~~~~~--~~~~g~----~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-~~  289 (294)
                      |.++.... +..++|+....+ +......+  .+..+.    ...++++++|++++++.++... . +.+||+++++ .+
T Consensus       149 E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l~~~-~-~g~yNigs~~~iS  225 (298)
T PLN02778        149 EELLKNYE-NVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKRN-L-TGIYNFTNPGVVS  225 (298)
T ss_pred             HHHHHHhh-ccEEeeecccCCcccccHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHHhCC-C-CCeEEeCCCCccc
Confidence            88887643 567888876442 21110000  000111    1246899999999999988653 2 3599997764 44


Q ss_pred             ccc
Q 022625          290 CEQ  292 (294)
Q Consensus       290 ~~e  292 (294)
                      +.|
T Consensus       226 ~~e  228 (298)
T PLN02778        226 HNE  228 (298)
T ss_pred             HHH
Confidence            444

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.49  E-value=2.3e-12  Score=116.36  Aligned_cols=189  Identities=11%  Similarity=0.072  Sum_probs=121.0

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCccc---hhhhcC--CCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRN---AMESFG--TYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG--~IG~~l~~~L~~~g~~V~~~~R~~~~---~~~~~~--~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|+++||||++  +||++++++|+++|++|++..|+...   ..+...  .....+++|++|.++++++++       
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4679999999996  99999999999999999999887532   111111  123568899999988876653       


Q ss_pred             CCcEEEEcCC--------c-h---------------------H----HhhhhhcCCCEEEEecccccccCCCCchhccch
Q 022625          163 GVRSIICPSE--------G-F---------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       163 ~~d~Vi~~~~--------~-~---------------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                      .+|++||+++        + +                     +    ...+.+ + .+||++||..+..+......|..+
T Consensus        85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-~-G~Iv~isS~~~~~~~~~~~~Y~as  162 (271)
T PRK06505         85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-G-GSMLTLTYGGSTRVMPNYNVMGVA  162 (271)
T ss_pred             CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-C-ceEEEEcCCCccccCCccchhhhh
Confidence            4699999822        1 1                     0    011222 2 689999998765444444455444


Q ss_pred             hH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCC--cc---eeeccC-CCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          209 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QG---FQFEEG-CAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       209 ~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~--~~---~~~~~g-~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      |.  ..+.+.....+...|++++.|.||.+.......  ..   ...... .....+..++|+|.++++++....  ..|
T Consensus       163 KaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~itG  242 (271)
T PRK06505        163 KAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSGVTG  242 (271)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccccccCc
Confidence            43  123333344455689999999999876321110  00   000011 112235689999999999887543  467


Q ss_pred             cEEEEecCC
Q 022625          279 LIFEVCEIS  287 (294)
Q Consensus       279 ~~~~v~~g~  287 (294)
                      +.+.+.+|-
T Consensus       243 ~~i~vdgG~  251 (271)
T PRK06505        243 EIHFVDSGY  251 (271)
T ss_pred             eEEeecCCc
Confidence            888887763

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.49  E-value=2e-12  Score=115.71  Aligned_cols=191  Identities=10%  Similarity=-0.025  Sum_probs=121.6

Q ss_pred             CcCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCccc---hhhhcC--CCcEEeecCCCCHHHHHHHhc-----
Q 022625           95 PEEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRN---AMESFG--TYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGat--G~IG~~l~~~L~~~g~~V~~~~R~~~~---~~~~~~--~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ..+.+|+++||||+  ++||++++++|+++|++|++..|+.+.   +.+...  ....++.+|++|.++++++++     
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   85 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE   85 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH
Confidence            34568999999998  599999999999999999999988542   121111  235678899999988876653     


Q ss_pred             --CCcEEEEcCC--------c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhcc
Q 022625          163 --GVRSIICPSE--------G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALM  206 (294)
Q Consensus       163 --~~d~Vi~~~~--------~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~  206 (294)
                        .+|++||+++        + +                         +...+++  -.++|++||.....+......|.
T Consensus        86 ~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~~~Y~  163 (258)
T PRK07533         86 WGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENYNLMG  163 (258)
T ss_pred             cCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccchhhH
Confidence              4699999821        1 0                         1111222  25899999987655443334444


Q ss_pred             chhH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc--e----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--C
Q 022625          207 KGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG--F----QFEEGCAANGSLSKEDAAFICVEALESIP--Q  276 (294)
Q Consensus       207 ~~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~--~----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~  276 (294)
                      .+|+  ..+.+.....+...|++++.|.||.+.........  .    .+...........++|+|.++++++..+.  .
T Consensus       164 asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~~~~~i  243 (258)
T PRK07533        164 PVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASDAARRL  243 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhChhhccc
Confidence            4332  11223333344557999999999987632111000  0    00011112345688999999999987643  5


Q ss_pred             CCcEEEEecCC
Q 022625          277 TGLIFEVCEIS  287 (294)
Q Consensus       277 ~g~~~~v~~g~  287 (294)
                      .|+.+.+.+|.
T Consensus       244 tG~~i~vdgg~  254 (258)
T PRK07533        244 TGNTLYIDGGY  254 (258)
T ss_pred             cCcEEeeCCcc
Confidence            68888887664

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.48  E-value=2e-12  Score=115.88  Aligned_cols=189  Identities=12%  Similarity=0.077  Sum_probs=120.4

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEEcCcc---chhhhcC--CCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKR---NAMESFG--TYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGa--tG~IG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~~--~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|+++||||  +++||++++++|+++|++|++..|+..   .+.+...  .....+++|++|.++++++++       
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            46799999997  679999999999999999998876532   2222211  134578999999988877663       


Q ss_pred             CCcEEEEcCC---------chH----------------------H----hhhhhcCCCEEEEecccccccCCCCchhccc
Q 022625          163 GVRSIICPSE---------GFI----------------------S----NAGSLKGVQHVILLSQLSVYRGSGGIQALMK  207 (294)
Q Consensus       163 ~~d~Vi~~~~---------~~~----------------------~----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~  207 (294)
                      .+|++||+++         .++                      .    ..+++. -.+||++||.....+......|..
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y~a  162 (261)
T PRK08690         84 GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMGM  162 (261)
T ss_pred             CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccchh
Confidence            4699999821         110                      0    012222 268999999877655444444544


Q ss_pred             hhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc---ce---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          208 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ---GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       208 ~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~---~~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                      +|.-  .+.+.....+...|++++.|.||.+........   ..   .+........+..++|+|+++++++....  ..
T Consensus       163 sKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~~~t  242 (261)
T PRK08690        163 AKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGIT  242 (261)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccCCcc
Confidence            4431  122333333456799999999999763211100   00   01111122345689999999999998644  46


Q ss_pred             CcEEEEecC
Q 022625          278 GLIFEVCEI  286 (294)
Q Consensus       278 g~~~~v~~g  286 (294)
                      |..+.+.+|
T Consensus       243 G~~i~vdgG  251 (261)
T PRK08690        243 GEITYVDGG  251 (261)
T ss_pred             eeEEEEcCC
Confidence            888888766

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.48  E-value=1.7e-12  Score=120.09  Aligned_cols=169  Identities=12%  Similarity=0.027  Sum_probs=111.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--------CCCcEEeecCCCC--HHH---HHHHhcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASN--KKF---LKTALRGV  164 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~v~~v~~D~~d--~~~---l~~~l~~~  164 (294)
                      .+++++||||+|+||++++++|+++|++|+++.|+++++.+..        ...+..+.+|+++  .+.   +.+.+.+.
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999999999987654321        1246778889985  333   33444444


Q ss_pred             --cEEEEcCC------c-h-------------------------HHhhhhhcCCCEEEEeccccccc-C-CCCchhccch
Q 022625          165 --RSIICPSE------G-F-------------------------ISNAGSLKGVQHVILLSQLSVYR-G-SGGIQALMKG  208 (294)
Q Consensus       165 --d~Vi~~~~------~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~-~-~~~~~~~~~~  208 (294)
                        |++||+++      . +                         +...+.+.+..+||++||..+.. + ......|..+
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aS  211 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAAT  211 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHH
Confidence              58888721      1 0                         11124455678999999987753 2 2334455444


Q ss_pred             hHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       209 ~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                      |..  .+.+.....+...|+++++|+||++........       .......+.+++|+.+++.+..
T Consensus       212 Kaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~-------~~~~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        212 KAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR-------RSSFLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             HHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc-------CCCCCCCCHHHHHHHHHHHhCC
Confidence            432  122333334556799999999999873322110       1112246899999999999964

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.48  E-value=1.5e-12  Score=114.39  Aligned_cols=185  Identities=16%  Similarity=0.111  Sum_probs=117.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc-chhhh------cCCCcEEeecCCCCHHHHHHHhc-------CCcEE
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAMES------FGTYVESMAGDASNKKFLKTALR-------GVRSI  167 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~-~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~d~V  167 (294)
                      |+||||+|+||.+++++|+++|++|++++|..+ +....      .+.+++++.+|++|.+++.++++       ..|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            589999999999999999999999999887543 22111      12468899999999988877664       35899


Q ss_pred             EEcCC-----ch---------------------HHhhh-----hhcCCCEEEEecccccccCCCCchhccchhHHH--HH
Q 022625          168 ICPSE-----GF---------------------ISNAG-----SLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA  214 (294)
Q Consensus       168 i~~~~-----~~---------------------~~~~~-----~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~  214 (294)
                      ||+.+     .+                     +.+.+     ++.+.++||++||.....+......|..++...  +.
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~  160 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGAT  160 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHH
Confidence            98722     00                     11111     224557999999987665544444554444311  12


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCCCCCcce---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      +.....+...|++++.|+||.+..........   ..............+|+|+++++++..+.  ..|....+.++
T Consensus       161 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       161 KALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             HHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEEecCC
Confidence            22223334578999999999876332211100   00011111235588999999999987654  35666666655

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.48  E-value=1.5e-12  Score=116.51  Aligned_cols=188  Identities=13%  Similarity=0.059  Sum_probs=119.9

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCccc------hhhhc--CCCcEEeecCCCCHHHHHHHhc----
Q 022625           97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRN------AMESF--GTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        97 ~~~~~vlVtGat--G~IG~~l~~~L~~~g~~V~~~~R~~~~------~~~~~--~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      +.+|+++||||+  ++||++++++|+++|++|++..|+.++      +.+..  ...+.++.+|++|.++++++++    
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            467999999986  799999999999999999888664331      21111  1246688999999988876664    


Q ss_pred             ---CCcEEEEcCC--------c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhc
Q 022625          163 ---GVRSIICPSE--------G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQAL  205 (294)
Q Consensus       163 ---~~d~Vi~~~~--------~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~  205 (294)
                         .+|++||+.+        + +                         +...+++  -.+||++||.....+......|
T Consensus        84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y  161 (258)
T PRK07370         84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYNVM  161 (258)
T ss_pred             HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccchh
Confidence               4699999822        1 1                         1111222  2689999998766544444455


Q ss_pred             cchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc----ce--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--
Q 022625          206 MKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF--QFEEGCAANGSLSKEDAAFICVEALESIP--  275 (294)
Q Consensus       206 ~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--  275 (294)
                      ..+|+.  .+.+.....+...|++++.|.||++........    ..  .+........+...+|+|.++.+++..+.  
T Consensus       162 ~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~  241 (258)
T PRK07370        162 GVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASG  241 (258)
T ss_pred             hHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhcc
Confidence            444431  122333334455789999999998863211100    00  00001112235678999999999887544  


Q ss_pred             CCCcEEEEecC
Q 022625          276 QTGLIFEVCEI  286 (294)
Q Consensus       276 ~~g~~~~v~~g  286 (294)
                      ..|+++.+.+|
T Consensus       242 ~tG~~i~vdgg  252 (258)
T PRK07370        242 ITGQTIYVDAG  252 (258)
T ss_pred             ccCcEEEECCc
Confidence            46788888665

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.48  E-value=1.9e-12  Score=111.00  Aligned_cols=165  Identities=17%  Similarity=0.228  Sum_probs=111.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc---CCcEEEEcCCc---
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPSEG---  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~---~~d~Vi~~~~~---  173 (294)
                      |+++||||+|+||++++++|+++ ++|+++.|++.           .+.+|++|.++++++++   ++|++||+.+.   
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~   68 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVHF   68 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCCC
Confidence            47999999999999999999999 99999998753           35789999999988776   56999998321   


Q ss_pred             ----------h-------------HHhhhhh--cCCCEEEEecccccccCCCCchhccchhHH--HHHHHHHHHHHhCCC
Q 022625          174 ----------F-------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESMLMASGI  226 (294)
Q Consensus       174 ----------~-------------~~~~~~~--~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~ae~~l~~~gl  226 (294)
                                +             +.+++..  .+..+|+++||.....+......|..+|..  .+.+.....+ ..|+
T Consensus        69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~-~~gi  147 (199)
T PRK07578         69 APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALEL-PRGI  147 (199)
T ss_pred             CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHc-cCCe
Confidence                      0             1111111  123679999988776554444455444321  1122222223 5789


Q ss_pred             CEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEE
Q 022625          227 PYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEV  283 (294)
Q Consensus       227 ~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v  283 (294)
                      +++.|+||++.+.... ....+    .....++.+|+|+.+.+++.. ...|++|++
T Consensus       148 ~v~~i~Pg~v~t~~~~-~~~~~----~~~~~~~~~~~a~~~~~~~~~-~~~g~~~~~  198 (199)
T PRK07578        148 RINVVSPTVLTESLEK-YGPFF----PGFEPVPAARVALAYVRSVEG-AQTGEVYKV  198 (199)
T ss_pred             EEEEEcCCcccCchhh-hhhcC----CCCCCCCHHHHHHHHHHHhcc-ceeeEEecc
Confidence            9999999988633211 11001    123468999999999998875 456777765

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.47  E-value=2e-12  Score=118.50  Aligned_cols=190  Identities=15%  Similarity=0.110  Sum_probs=113.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------c-CCCcEEeecCCCCHHHHHHHhc----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      .+..+|+|+||||+|+||++++++|+++|++|++++|+.++..+.       . +..++++.+|++|.++++++++    
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            345689999999999999999999999999999999987654321       1 2357889999999998877664    


Q ss_pred             ---CCcEEEEcCC-----------ch-----------------HHhhhhhcCCCEEEEeccccccc-C------------
Q 022625          163 ---GVRSIICPSE-----------GF-----------------ISNAGSLKGVQHVILLSQLSVYR-G------------  198 (294)
Q Consensus       163 ---~~d~Vi~~~~-----------~~-----------------~~~~~~~~gv~r~V~vSs~~~~~-~------------  198 (294)
                         .+|++||+++           ++                 +.+.+++.+.++||++||..... .            
T Consensus        92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~  171 (306)
T PRK06197         92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERR  171 (306)
T ss_pred             hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccC
Confidence               4699999832           10                 22234555667999999976432 1            


Q ss_pred             CCCchhccchhHHH--HHHHHHHHHHhCCCCEEEE--EccceecCCCCCcceee---ccCCCCCCCcCHHHHHHHHHHHh
Q 022625          199 SGGIQALMKGNARK--LAEQDESMLMASGIPYTII--RTGVLQNTPGGKQGFQF---EEGCAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       199 ~~~~~~~~~~~~~~--~~~~ae~~l~~~gl~~tiv--RPg~l~~~~~~~~~~~~---~~g~~~~~~Is~eDvA~~iv~aL  271 (294)
                      ..+...|..+|...  +.+.....+...+++++++  .||++...........+   .......-..+.+.-+...+.+.
T Consensus       172 ~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  251 (306)
T PRK06197        172 YNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLLAQSPEMGALPTLRAA  251 (306)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhhhcCCHHHHHHHHHHHh
Confidence            11122332222211  1111112233457776655  69987633221110000   00000111245677777777777


Q ss_pred             hCCCC-CCcEEEEe
Q 022625          272 ESIPQ-TGLIFEVC  284 (294)
Q Consensus       272 ~~~~~-~g~~~~v~  284 (294)
                      ..+.. .|+.|...
T Consensus       252 ~~~~~~~g~~~~~~  265 (306)
T PRK06197        252 TDPAVRGGQYYGPD  265 (306)
T ss_pred             cCCCcCCCeEEccC
Confidence            66543 45555543

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.47  E-value=2e-12  Score=115.85  Aligned_cols=188  Identities=10%  Similarity=-0.005  Sum_probs=119.3

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCcc---chhhhcC--CCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKR---NAMESFG--TYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG--~IG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~~--~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|+++||||++  +||++++++|+++|++|++..|+..   ...+...  ....++.+|++|+++++++++       
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG   85 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4579999999997  8999999999999999999888742   1221111  123457899999988877664       


Q ss_pred             CCcEEEEcCC---------ch---------------------H----HhhhhhcCCCEEEEecccccccCCCCchhccch
Q 022625          163 GVRSIICPSE---------GF---------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       163 ~~d~Vi~~~~---------~~---------------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                      .+|++||+.+         .+                     +    ...+++  -.+||++||.....+......|..+
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~as  163 (260)
T PRK06603         86 SFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMGVA  163 (260)
T ss_pred             CccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchhhH
Confidence            3699999721         00                     0    011222  2589999998765544444455444


Q ss_pred             hH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCC---C-cce--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          209 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGG---K-QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       209 ~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~---~-~~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      |+  ..+.+.....+...|++++.|.||.+......   . ...  .+........+..++|+|+++++++....  ..|
T Consensus       164 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG  243 (260)
T PRK06603        164 KAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKGVTG  243 (260)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccccCcc
Confidence            43  12233333445568999999999987532110   0 000  00001112234689999999999997644  467


Q ss_pred             cEEEEecC
Q 022625          279 LIFEVCEI  286 (294)
Q Consensus       279 ~~~~v~~g  286 (294)
                      +.+.+.+|
T Consensus       244 ~~i~vdgG  251 (260)
T PRK06603        244 EIHYVDCG  251 (260)
T ss_pred             eEEEeCCc
Confidence            88888766

>PRK06484 short chain dehydrogenase; Validated

Probab=99.45  E-value=3.9e-12  Score=124.73  Aligned_cols=190  Identities=13%  Similarity=0.061  Sum_probs=124.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI  167 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~V  167 (294)
                      .+|+++||||+++||.+++++|+++|++|+++.|+.+++.+.   .+..+.++.+|++|+++++++++       .+|++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            579999999999999999999999999999999988765433   23457789999999988877664       46999


Q ss_pred             EEcCCc-------h-------------------------HHhhhhhcCCC-EEEEecccccccCCCCchhccchhHH--H
Q 022625          168 ICPSEG-------F-------------------------ISNAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGNAR--K  212 (294)
Q Consensus       168 i~~~~~-------~-------------------------~~~~~~~~gv~-r~V~vSs~~~~~~~~~~~~~~~~~~~--~  212 (294)
                      ||+.+.       +                         +...+.+.+.. +||++||..+..+......|..+|..  .
T Consensus        84 i~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~  163 (520)
T PRK06484         84 VNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVIS  163 (520)
T ss_pred             EECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHH
Confidence            998321       0                         11122233433 89999998776655555555554432  1


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCCC----ccee---eccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----~~~~---~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                      +.+.....+...+++++.|+||.+.......    ....   +..........+.+|+|+++.+++..+.  ..|+.+.+
T Consensus       164 l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~~~~~  243 (520)
T PRK06484        164 LTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGSTLVV  243 (520)
T ss_pred             HHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCceEEe
Confidence            2223333345578999999999875221110    0000   0000111234589999999999887543  45677766


Q ss_pred             ecCC
Q 022625          284 CEIS  287 (294)
Q Consensus       284 ~~g~  287 (294)
                      .++-
T Consensus       244 ~gg~  247 (520)
T PRK06484        244 DGGW  247 (520)
T ss_pred             cCCe
Confidence            6553

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.44  E-value=6.7e-12  Score=113.43  Aligned_cols=185  Identities=13%  Similarity=0.064  Sum_probs=115.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc------CCcE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR------GVRS  166 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~------~~d~  166 (294)
                      +|+++|||| |+||++++++|. +|++|++++|+.+++.+..      +..+.++.+|++|.+++.++++      .+|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            578999998 699999999996 8999999999876543221      2357789999999988877764      4799


Q ss_pred             EEEcCCc------h-------------HHh----hhhhcCCCEEEEecccccccCC------------------------
Q 022625          167 IICPSEG------F-------------ISN----AGSLKGVQHVILLSQLSVYRGS------------------------  199 (294)
Q Consensus       167 Vi~~~~~------~-------------~~~----~~~~~gv~r~V~vSs~~~~~~~------------------------  199 (294)
                      +||+++-      +             +.+    .+.+.  .++|++||..+..+.                        
T Consensus        80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (275)
T PRK06940         80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFL  157 (275)
T ss_pred             EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccCcccchhhhccccccccccccccccc
Confidence            9998321      0             111    12222  456778776553321                        


Q ss_pred             ------CCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce--------eeccCCCCCCCcCHHHH
Q 022625          200 ------GGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF--------QFEEGCAANGSLSKEDA  263 (294)
Q Consensus       200 ------~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~--------~~~~g~~~~~~Is~eDv  263 (294)
                            .....|..+|..  .+.+.....+...|++++.|+||++..........        .+........+...+|+
T Consensus       158 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peei  237 (275)
T PRK06940        158 QPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDEI  237 (275)
T ss_pred             cccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCHHHH
Confidence                  012234333322  11222222244578999999999876322110000        00001112345789999


Q ss_pred             HHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          264 AFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       264 A~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      |+++++++....  ..|..+.+.+|.
T Consensus       238 a~~~~fL~s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        238 AALAEFLMGPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             HHHHHHHcCcccCcccCceEEEcCCe
Confidence            999999886543  468888887663

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.44  E-value=1.3e-11  Score=108.31  Aligned_cols=182  Identities=11%  Similarity=0.059  Sum_probs=112.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHh---cCCcEEEEcCCch
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL---RGVRSIICPSEGF  174 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l---~~~d~Vi~~~~~~  174 (294)
                      |+|+||||+|+||++++++|+++|  ..|++..|+....  .....++++++|++|.++++++.   .++|++||+.+..
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~   78 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGML   78 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccc
Confidence            589999999999999999999985  5666666655332  12346888999999998876654   4679999982210


Q ss_pred             ------------------------------------HHhhhhhcCCCEEEEeccccccc---CCCCchhccchhHH--HH
Q 022625          175 ------------------------------------ISNAGSLKGVQHVILLSQLSVYR---GSGGIQALMKGNAR--KL  213 (294)
Q Consensus       175 ------------------------------------~~~~~~~~gv~r~V~vSs~~~~~---~~~~~~~~~~~~~~--~~  213 (294)
                                                          +...+++.+..+++++||.....   +..+...|..+|..  .+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~  158 (235)
T PRK09009         79 HTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMF  158 (235)
T ss_pred             cccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHHH
Confidence                                                11123344557899998753311   11222344333321  11


Q ss_pred             HHHHHHHHHh--CCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          214 AEQDESMLMA--SGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       214 ~~~ae~~l~~--~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      .+.....+..  .++.++.|.||.+........    ........+++.+|+|+.+++++....  ..|..+.+.++-
T Consensus       159 ~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~  232 (235)
T PRK09009        159 LKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF----QQNVPKGKLFTPEYVAQCLLGIIANATPAQSGSFLAYDGET  232 (235)
T ss_pred             HHHHHHHhhcccCCeEEEEEcccceecCCCcch----hhccccCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeCCcC
Confidence            1111111222  478999999999763322211    111223346799999999999998754  456777665543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.44  E-value=1.5e-12  Score=120.27  Aligned_cols=74  Identities=12%  Similarity=0.246  Sum_probs=62.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---c---CCCcEEeecCCCCHHHHHHHhcC-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F---GTYVESMAGDASNKKFLKTALRG-------  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~---~~~v~~v~~D~~d~~~l~~~l~~-------  163 (294)
                      ..+++++||||+|+||.+++++|+++|++|++++|+.+++.+.   .   +..++++.+|++|.++++++++.       
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            3578999999999999999999999999999999987764332   1   23578899999999988877653       


Q ss_pred             CcEEEEc
Q 022625          164 VRSIICP  170 (294)
Q Consensus       164 ~d~Vi~~  170 (294)
                      +|++||+
T Consensus        84 iD~li~n   90 (322)
T PRK07453         84 LDALVCN   90 (322)
T ss_pred             ccEEEEC
Confidence            7999998

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.43  E-value=4.7e-12  Score=114.35  Aligned_cols=191  Identities=9%  Similarity=0.057  Sum_probs=120.3

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCc---cchhhhcC--CCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDK---RNAMESFG--TYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGat--G~IG~~l~~~L~~~g~~V~~~~R~~---~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|+++||||+  ++||++++++|+++|++|++..|+.   +++.+...  ....++++|++|.++++++++       
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   87 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG   87 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence            457999999997  8999999999999999999888763   22222211  135578999999988877654       


Q ss_pred             CCcEEEEcCC--------c-h---------------------HHhhhhh--cCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 GVRSIICPSE--------G-F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 ~~d~Vi~~~~--------~-~---------------------~~~~~~~--~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                      .+|++||+++        + +                     +...+..  .+-.++|++||.....+......|..+|.
T Consensus        88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~asKa  167 (272)
T PRK08159         88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVAKA  167 (272)
T ss_pred             CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhHHH
Confidence            4699999821        1 0                     0111111  12268999999766554444444544443


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCCC---Ccc--eeecc-CCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGG---KQG--FQFEE-GCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~---~~~--~~~~~-g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      -  .+.+.....+...|++++.|.||.+......   ...  ..+.. .........++|+|+++++++....  ..|..
T Consensus       168 al~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~~itG~~  247 (272)
T PRK08159        168 ALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRGVTGEV  247 (272)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCccccCccceE
Confidence            1  2233333344557899999999987632110   000  00000 1111235689999999999997644  46788


Q ss_pred             EEEecCC
Q 022625          281 FEVCEIS  287 (294)
Q Consensus       281 ~~v~~g~  287 (294)
                      +.+.+|-
T Consensus       248 i~vdgG~  254 (272)
T PRK08159        248 HHVDSGY  254 (272)
T ss_pred             EEECCCc
Confidence            8887763

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.43  E-value=1e-11  Score=110.66  Aligned_cols=166  Identities=9%  Similarity=0.018  Sum_probs=105.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc-chhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc-
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-  173 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~-~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-  173 (294)
                      .+.+++++||||+|+||++++++|+++|++|+++.|+.. ............+.+|++|.+++.+.+..+|++||+++. 
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~   90 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGIN   90 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence            446799999999999999999999999999999999863 222111112357889999999999999999999998321 


Q ss_pred             ---------h-------------HH----hhhhhc---CCCEEEEecccccccCCCCchhccchhHHH--HHHHHHH---
Q 022625          174 ---------F-------------IS----NAGSLK---GVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDES---  219 (294)
Q Consensus       174 ---------~-------------~~----~~~~~~---gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~ae~---  219 (294)
                               +             +.    ..+.+.   +-..++..||.....+. ....|..+|..-  .....+.   
T Consensus        91 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~-~~~~Y~aSKaal~~~~~l~~~l~~  169 (245)
T PRK12367         91 PGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPA-LSPSYEISKRLIGQLVSLKKNLLD  169 (245)
T ss_pred             CcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCC-CCchhHHHHHHHHHHHHHHHHHHH
Confidence                     0             11    122221   12234344444433332 223454444321  0111111   


Q ss_pred             HHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          220 MLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       220 ~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      .+...++.++.+.||.+.... .           ....++.+|+|+.+++++.+.
T Consensus       170 e~~~~~i~v~~~~pg~~~t~~-~-----------~~~~~~~~~vA~~i~~~~~~~  212 (245)
T PRK12367        170 KNERKKLIIRKLILGPFRSEL-N-----------PIGIMSADFVAKQILDQANLG  212 (245)
T ss_pred             hhcccccEEEEecCCCccccc-C-----------ccCCCCHHHHHHHHHHHHhcC
Confidence            123468888999998864211 0           113578999999999999764

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.43  E-value=6.6e-12  Score=112.86  Aligned_cols=190  Identities=12%  Similarity=0.088  Sum_probs=120.7

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCcc---chhhhc--CCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG--~IG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~--~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|+++||||++  +||++++++|+++|++|++..|+..   ...+..  .....++.+|++|.++++++++       
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            4579999999985  8999999999999999999888731   122221  1245678899999988887663       


Q ss_pred             CCcEEEEcCC-----c-----h---------------------HHhhh---hhcCCCEEEEecccccccCCCCchhccch
Q 022625          163 GVRSIICPSE-----G-----F---------------------ISNAG---SLKGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       163 ~~d~Vi~~~~-----~-----~---------------------~~~~~---~~~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                      .+|++||+++     .     +                     +..++   .+.+ .+||++||.....+......|..+
T Consensus        84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~Iv~iss~~~~~~~~~~~~Y~as  162 (262)
T PRK07984         84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG-SALLTLSYLGAERAIPNYNVMGLA  162 (262)
T ss_pred             CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCC-cEEEEEecCCCCCCCCCcchhHHH
Confidence            3599999832     0     1                     00111   1122 589999998765544444455444


Q ss_pred             hH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCC-cce-e----eccCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          209 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGF-Q----FEEGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       209 ~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-~~~-~----~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      |.  ..+.+.....+...|++++.|.||.+....... ... .    .........+..++|+|.++++++....  ..|
T Consensus       163 Kaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG  242 (262)
T PRK07984        163 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISG  242 (262)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcccccccC
Confidence            32  122233333445579999999999876321110 000 0    0001122345689999999999887643  467


Q ss_pred             cEEEEecCC
Q 022625          279 LIFEVCEIS  287 (294)
Q Consensus       279 ~~~~v~~g~  287 (294)
                      ..+.+.+|-
T Consensus       243 ~~i~vdgg~  251 (262)
T PRK07984        243 EVVHVDGGF  251 (262)
T ss_pred             cEEEECCCc
Confidence            888887663

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.42  E-value=1.9e-11  Score=106.60  Aligned_cols=172  Identities=13%  Similarity=0.090  Sum_probs=113.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHh---c--CCcEEEEcCCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL---R--GVRSIICPSEG  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l---~--~~d~Vi~~~~~  173 (294)
                      +++++||||+|+||++++++|+++|++|+++.|++++..+....+++++.+|++|.+.+++++   .  .+|++||+.+.
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            478999999999999999999999999999999987665544445778999999998888764   2  37999997211


Q ss_pred             h----------------------------HHhhhh---hcCCCEEEEecccccccCCCCc---hhccchhHHHHHHHHHH
Q 022625          174 F----------------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGI---QALMKGNARKLAEQDES  219 (294)
Q Consensus       174 ~----------------------------~~~~~~---~~gv~r~V~vSs~~~~~~~~~~---~~~~~~~~~~~~~~ae~  219 (294)
                      .                            +.+++.   +.+-.++|++||..........   ..|..+|.     ..+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~-----a~~~  155 (222)
T PRK06953         81 YGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKA-----ALND  155 (222)
T ss_pred             ccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHH-----HHHH
Confidence            0                            111111   1223579999886543221111   12433322     2222


Q ss_pred             HHH----h-CCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          220 MLM----A-SGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       220 ~l~----~-~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      +++    + .+++++.|+||++......           ....++.++.+..++.++....  ..+..|...+.
T Consensus       156 ~~~~~~~~~~~i~v~~v~Pg~i~t~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (222)
T PRK06953        156 ALRAASLQARHATCIALHPGWVRTDMGG-----------AQAALDPAQSVAGMRRVIAQATRRDNGRFFQYDGV  218 (222)
T ss_pred             HHHHHhhhccCcEEEEECCCeeecCCCC-----------CCCCCCHHHHHHHHHHHHHhcCcccCceEEeeCCc
Confidence            222    2 4789999999998732211           1235789999999999876433  44566665443

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.42  E-value=7.2e-12  Score=112.33  Aligned_cols=177  Identities=16%  Similarity=0.157  Sum_probs=128.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-----CCcEEeecCCCCHHHHHHHhc-------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+..|+.||||||++++|++++.+++++|..+++.+.+.+...+...     ..++.+.+|+++.+.+.+..+       
T Consensus        34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG  113 (300)
T ss_pred             hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            34568999999999999999999999999999999998865443211     158899999999987765543       


Q ss_pred             CCcEEEEcCC---c--h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          163 GVRSIICPSE---G--F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       163 ~~d~Vi~~~~---~--~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      .+|++|++++   +  +                         +...+.+..-.|+|-++|..+.-+..+..+|..+|.. 
T Consensus       114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~  193 (300)
T KOG1201|consen  114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAA  193 (300)
T ss_pred             CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHH
Confidence            5599998722   1  0                         2334566677899999999888777777788777642 


Q ss_pred             -HHHHHHHHHHHh---CCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          212 -KLAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       212 -~~~~~ae~~l~~---~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                       ..++.....+++   .|++.|.+.|+++-.+.-.+.    ..-....+.+..+.+|+.+++++....
T Consensus       194 vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~----~~~~~l~P~L~p~~va~~Iv~ai~~n~  257 (300)
T KOG1201|consen  194 VGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGA----TPFPTLAPLLEPEYVAKRIVEAILTNQ  257 (300)
T ss_pred             HHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCC----CCCccccCCCCHHHHHHHHHHHHHcCC
Confidence             344444444554   569999999998764332220    111334677899999999999987643

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.42  E-value=7.2e-12  Score=120.91  Aligned_cols=191  Identities=16%  Similarity=0.124  Sum_probs=120.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc--chhhhc-CCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NAMESF-GTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~--~~~~~~-~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      ...+++++||||+|+||..++++|+++|++|+++.|...  .+.+.. ..+.+++.+|++|.++++++++       .+|
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD  286 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence            456899999999999999999999999999999988532  222211 1235678899999988877654       469


Q ss_pred             EEEEcCCc-------------h-------------HHhhhhh----cCCCEEEEecccccccCCCCchhccchhHH--HH
Q 022625          166 SIICPSEG-------------F-------------ISNAGSL----KGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL  213 (294)
Q Consensus       166 ~Vi~~~~~-------------~-------------~~~~~~~----~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~  213 (294)
                      +|||+.+.             +             +.+++..    ..-.+||++||.....+..+...|..+|..  .+
T Consensus       287 ~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~  366 (450)
T PRK08261        287 IVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGL  366 (450)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHHHH
Confidence            99998321             0             1111211    223689999998765544444455444431  12


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCCcceeec-cC---CCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFE-EG---CAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~-~g---~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      .+.....+...+++++.|.||.+............. ..   ......-..+|+|+++++++....  ..|+++.+.++
T Consensus       367 ~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g~  445 (450)
T PRK08261        367 VQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAWLASPASGGVTGNVVRVCGQ  445 (450)
T ss_pred             HHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence            223333445579999999999875321111000000 00   011222467999999999886543  46888888664

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.41  E-value=8.3e-12  Score=111.91  Aligned_cols=189  Identities=15%  Similarity=0.084  Sum_probs=118.6

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEEcC---ccchhhhcC--CCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKD---KRNAMESFG--TYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGa--tG~IG~~l~~~L~~~g~~V~~~~R~---~~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|+++||||  +++||++++++|+++|++|++..|.   .+.+.+...  .....+.+|++|.++++++++       
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            45799999996  6799999999999999999987653   333322211  123468899999988877664       


Q ss_pred             CCcEEEEcCC---------chH--------------------------HhhhhhcCCCEEEEecccccccCCCCchhccc
Q 022625          163 GVRSIICPSE---------GFI--------------------------SNAGSLKGVQHVILLSQLSVYRGSGGIQALMK  207 (294)
Q Consensus       163 ~~d~Vi~~~~---------~~~--------------------------~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~  207 (294)
                      .+|++||+++         .++                          ...+.  +-.++|++||..+..+......|..
T Consensus        84 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~~~~~~~~~Y~a  161 (260)
T PRK06997         84 GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAERVVPNYNTMGL  161 (260)
T ss_pred             CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeccccccCCCCcchHHH
Confidence            4699999721         110                          01121  2368999999876554444444544


Q ss_pred             hhH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCc---ce---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          208 GNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ---GF---QFEEGCAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       208 ~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~---~~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                      +|.  ..+.+.....+...|++++.|.||.+........   ..   .+...........++|+|+++.+++..+.  ..
T Consensus       162 sKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~it  241 (260)
T PRK06997        162 AKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLASGVT  241 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhCccccCcc
Confidence            432  1122333333445789999999998763211100   00   00001112235689999999999997643  56


Q ss_pred             CcEEEEecCC
Q 022625          278 GLIFEVCEIS  287 (294)
Q Consensus       278 g~~~~v~~g~  287 (294)
                      |+++.+.+|.
T Consensus       242 G~~i~vdgg~  251 (260)
T PRK06997        242 GEITHVDSGF  251 (260)
T ss_pred             eeEEEEcCCh
Confidence            8888887664

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.41  E-value=1.1e-11  Score=111.27  Aligned_cols=187  Identities=14%  Similarity=0.079  Sum_probs=115.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-ccchhhh---c----CCCcEEeecCCCCHHHH----HHHh------
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES---F----GTYVESMAGDASNKKFL----KTAL------  161 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~-~~~~~~~---~----~~~v~~v~~D~~d~~~l----~~~l------  161 (294)
                      ++++||||+++||++++++|+++|++|+++.|. ++++...   .    +..+.++.+|++|.+++    ++++      
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            689999999999999999999999999998764 3332211   1    23466789999998654    2332      


Q ss_pred             -cCCcEEEEcCCc------------------------h-------------HHhh----hhhc------CCCEEEEeccc
Q 022625          162 -RGVRSIICPSEG------------------------F-------------ISNA----GSLK------GVQHVILLSQL  193 (294)
Q Consensus       162 -~~~d~Vi~~~~~------------------------~-------------~~~~----~~~~------gv~r~V~vSs~  193 (294)
                       .++|+|||+++.                        +             +..+    ++..      +..++|++||.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence             357999998220                        0             0001    1111      12478888887


Q ss_pred             ccccCCCCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc---eeeccCCCC-CCCcCHHHHHHHH
Q 022625          194 SVYRGSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---FQFEEGCAA-NGSLSKEDAAFIC  267 (294)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~---~~~~~g~~~-~~~Is~eDvA~~i  267 (294)
                      ....+......|..+|..  .+.+.....+...|++++.|+||++. .+.....   ..+...... ....+.+|+|.++
T Consensus       162 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  240 (267)
T TIGR02685       162 MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSL-LPDAMPFEVQEDYRRKVPLGQREASAEQIADVV  240 (267)
T ss_pred             hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCcc-CccccchhHHHHHHHhCCCCcCCCCHHHHHHHH
Confidence            665554444556544431  12222223344579999999999874 2211000   011111111 1346899999999


Q ss_pred             HHHhhCCC--CCCcEEEEecCC
Q 022625          268 VEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       268 v~aL~~~~--~~g~~~~v~~g~  287 (294)
                      ++++..+.  ..|+.+.+.+|.
T Consensus       241 ~~l~~~~~~~~~G~~~~v~gg~  262 (267)
T TIGR02685       241 IFLVSPKAKYITGTCIKVDGGL  262 (267)
T ss_pred             HHHhCcccCCcccceEEECCce
Confidence            99987653  468888887664

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.40  E-value=4.3e-12  Score=113.20  Aligned_cols=182  Identities=16%  Similarity=0.131  Sum_probs=114.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHH----CCCeEEEEEcCccchhhhc--------CCCcEEeecCCCCHHHHHHHhcCC----
Q 022625          101 AVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALRGV----  164 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~----~g~~V~~~~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~l~~~----  164 (294)
                      .++||||+++||.+++++|++    .|++|+++.|+.+++.+..        +..+.++.+|++|.++++++++.+    
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999877543321        225788999999998887766422    


Q ss_pred             -------cEEEEcCCc-------h--------------------------HHhhhhhc-C-CCEEEEecccccccCCCCc
Q 022625          165 -------RSIICPSEG-------F--------------------------ISNAGSLK-G-VQHVILLSQLSVYRGSGGI  202 (294)
Q Consensus       165 -------d~Vi~~~~~-------~--------------------------~~~~~~~~-g-v~r~V~vSs~~~~~~~~~~  202 (294)
                             |++||+++.       .                          +...+++. + ..+||++||.....+....
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence                   478886210       0                          01112222 2 3589999998876655555


Q ss_pred             hhccchhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCC------c-ce--eeccCCCCCCCcCHHHHHHHHHHHh
Q 022625          203 QALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK------Q-GF--QFEEGCAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       203 ~~~~~~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~------~-~~--~~~~g~~~~~~Is~eDvA~~iv~aL  271 (294)
                      ..|..+|..-  +.+.....+...++.++.|+||++.......      . ..  .+........+.+++|+|..+++++
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~  241 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLL  241 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence            5564444321  1222222334578999999999876321110      0 00  0000011133678999999999999


Q ss_pred             hCCC-CCCcEEE
Q 022625          272 ESIP-QTGLIFE  282 (294)
Q Consensus       272 ~~~~-~~g~~~~  282 (294)
                      .+.. ..|+.+.
T Consensus       242 ~~~~~~~G~~~~  253 (256)
T TIGR01500       242 EKDKFKSGAHVD  253 (256)
T ss_pred             hcCCcCCcceee
Confidence            6433 3454443

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.39  E-value=1.6e-11  Score=109.82  Aligned_cols=188  Identities=15%  Similarity=0.084  Sum_probs=117.1

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEEcCc--cchhh---hcCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDK--RNAME---SFGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGa--tG~IG~~l~~~L~~~g~~V~~~~R~~--~~~~~---~~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|+++||||  +++||.+++++|+++|++|++..|+.  +...+   ..+..+.++.+|++|.++++++++       
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   84 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD   84 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            45799999999  89999999999999999999998764  22222   123357789999999988877653       


Q ss_pred             CCcEEEEcCC---------ch-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccch
Q 022625          163 GVRSIICPSE---------GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       163 ~~d~Vi~~~~---------~~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                      .+|++||+++         .+                         +...+++  -.++|++|+.... +......|..+
T Consensus        85 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~~~-~~~~~~~Y~as  161 (256)
T PRK07889         85 GLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDATV-AWPAYDWMGVA  161 (256)
T ss_pred             CCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecccc-cCCccchhHHH
Confidence            4699999721         11                         0111222  2589998865321 11222223333


Q ss_pred             hH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-c---e--eeccCCCCC-CCcCHHHHHHHHHHHhhCCC--CC
Q 022625          209 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G---F--QFEEGCAAN-GSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       209 ~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~---~--~~~~g~~~~-~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                      |.  ..+.+.....+...|++++.|.||.+........ .   .  .+....... .+.+++|+|+++++++.++.  ..
T Consensus       162 Kaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~~~~~t  241 (256)
T PRK07889        162 KAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDWFPATT  241 (256)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhCccccccc
Confidence            32  1223333344556899999999998763211100 0   0  000011111 35789999999999987643  46


Q ss_pred             CcEEEEecCC
Q 022625          278 GLIFEVCEIS  287 (294)
Q Consensus       278 g~~~~v~~g~  287 (294)
                      |+++.+.+|.
T Consensus       242 G~~i~vdgg~  251 (256)
T PRK07889        242 GEIVHVDGGA  251 (256)
T ss_pred             ceEEEEcCce
Confidence            7888887663

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.38  E-value=9.5e-12  Score=109.52  Aligned_cols=171  Identities=7%  Similarity=0.028  Sum_probs=112.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHh-------c-
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTAL-------R-  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l-------~-  162 (294)
                      +.+|+++||||+++||++++++|+++|++|+++.|+.+++.+..      +..+..+.+|++|.+++++++       . 
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            46799999999999999999999999999999999887654321      235677889999998887665       2 


Q ss_pred             CCcEEEEcCCc-----h--------------------------HHhhhhhcC-CCEEEEecccccccCCCCchhccchhH
Q 022625          163 GVRSIICPSEG-----F--------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 ~~d~Vi~~~~~-----~--------------------------~~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                      .+|++||+.+.     .                          +...+.+.+ -.+||++||.....   ....|..+|+
T Consensus        83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~---~~~~Y~asKa  159 (227)
T PRK08862         83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ---DLTGVESSNA  159 (227)
T ss_pred             CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC---CcchhHHHHH
Confidence            57999998321     0                          011133332 46899999865432   2234444432


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcC-HHHHHHHHHHHhhCCCCCCcE
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLS-KEDAAFICVEALESIPQTGLI  280 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is-~eDvA~~iv~aL~~~~~~g~~  280 (294)
                      .  .+.+.....+...+++++.|.||++.... .....         .+.. .+|++.+..+++.++-..|..
T Consensus       160 al~~~~~~la~el~~~~Irvn~v~PG~i~t~~-~~~~~---------~~~~~~~~~~~~~~~l~~~~~~tg~~  222 (227)
T PRK08862        160 LVSGFTHSWAKELTPFNIRVGGVVPSIFSANG-ELDAV---------HWAEIQDELIRNTEYIVANEYFSGRV  222 (227)
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC-ccCHH---------HHHHHHHHHHhheeEEEecccccceE
Confidence            1  22233344455689999999999987331 11101         1111 288888888888654444443

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.37  E-value=1e-11  Score=114.48  Aligned_cols=186  Identities=15%  Similarity=0.131  Sum_probs=113.5

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------c-CCCcEEeecCCCCHHHHHHHhc----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      .++.+|+++||||+++||.+++++|+++|++|++++|+.++..+.       . ...++++.+|++|.++++++++    
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999998754322       1 1357889999999998887664    


Q ss_pred             ---CCcEEEEcCC------------ch-----------------HHhhhhhcCCCEEEEecccccccCC-----------
Q 022625          163 ---GVRSIICPSE------------GF-----------------ISNAGSLKGVQHVILLSQLSVYRGS-----------  199 (294)
Q Consensus       163 ---~~d~Vi~~~~------------~~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~-----------  199 (294)
                         .+|++||+++            ++                 +...+++ +..|||++||.......           
T Consensus        90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~-~~~riv~vsS~~~~~~~~~~~~~~~~~~  168 (313)
T PRK05854         90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRA-GRARVTSQSSIAARRGAINWDDLNWERS  168 (313)
T ss_pred             hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHh-CCCCeEEEechhhcCCCcCccccccccc
Confidence               3699999722            11                 1111222 34689999987653221           


Q ss_pred             -CCchhccchhHHHHHHHHHHHH-----HhCCCCEEEEEccceecCCCCCcc--------e--eecc--CCCCCCCcCHH
Q 022625          200 -GGIQALMKGNARKLAEQDESML-----MASGIPYTIIRTGVLQNTPGGKQG--------F--QFEE--GCAANGSLSKE  261 (294)
Q Consensus       200 -~~~~~~~~~~~~~~~~~ae~~l-----~~~gl~~tivRPg~l~~~~~~~~~--------~--~~~~--g~~~~~~Is~e  261 (294)
                       .+...|..+|..... .+..+.     ...|+.++.+.||.+.........        .  .+..  .....-.-+.+
T Consensus       169 ~~~~~~Y~~SK~a~~~-~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (313)
T PRK05854        169 YAGMRAYSQSKIAVGL-FALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVE  247 (313)
T ss_pred             CcchhhhHHHHHHHHH-HHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHH
Confidence             112233333321111 111111     125799999999987633211100        0  0000  00011134678


Q ss_pred             HHHHHHHHHhhCCCC-CCcEEE
Q 022625          262 DAAFICVEALESIPQ-TGLIFE  282 (294)
Q Consensus       262 DvA~~iv~aL~~~~~-~g~~~~  282 (294)
                      +-|...+.+...+.. .|+.|.
T Consensus       248 ~ga~~~l~~a~~~~~~~g~~~~  269 (313)
T PRK05854        248 SAILPALYAATSPDAEGGAFYG  269 (313)
T ss_pred             HHHHHhhheeeCCCCCCCcEEC
Confidence            888888887777654 345554

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.37  E-value=4.4e-11  Score=109.95  Aligned_cols=186  Identities=9%  Similarity=-0.035  Sum_probs=114.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc----------chhhh------cCCCcEEeecCCCCHHHHHHH
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----------NAMES------FGTYVESMAGDASNKKFLKTA  160 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~----------~~~~~------~~~~v~~v~~D~~d~~~l~~~  160 (294)
                      +.+|+++||||+++||++++++|+++|++|+++.|+..          ++.+.      .+..+.++.+|++|.++++++
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   85 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL   85 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            56899999999999999999999999999999999742          22111      123467889999999888776


Q ss_pred             hc-------CCcEEEEcC-C--------c-h-------------------------HHhhhhhcCCCEEEEeccccccc-
Q 022625          161 LR-------GVRSIICPS-E--------G-F-------------------------ISNAGSLKGVQHVILLSQLSVYR-  197 (294)
Q Consensus       161 l~-------~~d~Vi~~~-~--------~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~-  197 (294)
                      ++       .+|++||+. +        . +                         +...+.+.+-.+||++||..+.. 
T Consensus        86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~  165 (305)
T PRK08303         86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYN  165 (305)
T ss_pred             HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccccc
Confidence            54       469999875 2        1 0                         01113333446899999865422 


Q ss_pred             C--CCCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCC------CCcce-eeccCCC-CCCCcCHHHHHH
Q 022625          198 G--SGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPG------GKQGF-QFEEGCA-ANGSLSKEDAAF  265 (294)
Q Consensus       198 ~--~~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~------~~~~~-~~~~g~~-~~~~Is~eDvA~  265 (294)
                      .  ......|..+|.-  .+.+.....+...|++++.|.||++.....      ..... ....... ..-..+++|+|.
T Consensus       166 ~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~peevA~  245 (305)
T PRK08303        166 ATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHFAISETPRYVGR  245 (305)
T ss_pred             CcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccccccCCCHHHHHH
Confidence            1  1122334433321  122333333455789999999998752210      00000 0000011 112247899999


Q ss_pred             HHHHHhhCCC---CCCcEEE
Q 022625          266 ICVEALESIP---QTGLIFE  282 (294)
Q Consensus       266 ~iv~aL~~~~---~~g~~~~  282 (294)
                      ++++++..+.   ..|+.+.
T Consensus       246 ~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        246 AVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             HHHHHHcCcchhhcCCcEEE
Confidence            9999997753   2455543

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.36  E-value=2.1e-11  Score=112.40  Aligned_cols=185  Identities=12%  Similarity=0.210  Sum_probs=113.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchhhh---c---CCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---F---GTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~~---~---~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      .+++++||||+++||.+++++|+++| ++|++++|+.++..+.   .   +..++++.+|++|.++++++++       .
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999 9999999988654332   1   2357788999999988876653       4


Q ss_pred             CcEEEEcCCc--------------h-----------------HHhhhhhcC--CCEEEEecccccccCC-----------
Q 022625          164 VRSIICPSEG--------------F-----------------ISNAGSLKG--VQHVILLSQLSVYRGS-----------  199 (294)
Q Consensus       164 ~d~Vi~~~~~--------------~-----------------~~~~~~~~g--v~r~V~vSs~~~~~~~-----------  199 (294)
                      +|++||+++.              +                 +...+++.+  ..|||++||..++...           
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            7999997221              0                 111233332  4699999998654210           


Q ss_pred             ----------------------CCchhccchhHHHH--HHHHHHHHH-hCCCCEEEEEcccee-cCCCCCcc-e---eec
Q 022625          200 ----------------------GGIQALMKGNARKL--AEQDESMLM-ASGIPYTIIRTGVLQ-NTPGGKQG-F---QFE  249 (294)
Q Consensus       200 ----------------------~~~~~~~~~~~~~~--~~~ae~~l~-~~gl~~tivRPg~l~-~~~~~~~~-~---~~~  249 (294)
                                            .+...|..+|....  .+.....+. ..|+.++.|+||.+. ........ .   .+.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~  241 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFP  241 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHH
Confidence                                  01122333332211  111111122 257999999999884 22221100 0   000


Q ss_pred             --cCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEE
Q 022625          250 --EGCAANGSLSKEDAAFICVEALESIP--QTGLIFE  282 (294)
Q Consensus       250 --~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~  282 (294)
                        .........+.++.|+.++.++..+.  ..|..|.
T Consensus       242 ~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~  278 (314)
T TIGR01289       242 PFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWS  278 (314)
T ss_pred             HHHHHHhccccchhhhhhhhHHhhcCcccCCCceeee
Confidence              00011235789999999999887653  2355444

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.35  E-value=1e-10  Score=102.25  Aligned_cols=171  Identities=14%  Similarity=0.110  Sum_probs=107.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHHhc-----CCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR-----GVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l~-----~~d~Vi~~~~  172 (294)
                      +++++||||+|+||+.++++|+++|++|++++|++++...... .++.++.+|++|.++++++++     ++|+|||+++
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            4789999999999999999999999999999999876543221 357788899999988877765     4799999721


Q ss_pred             c-------h---------------------HHhhhh---hcCCCEEEEecccccccC---CCCchhccchhHH--HHHHH
Q 022625          173 G-------F---------------------ISNAGS---LKGVQHVILLSQLSVYRG---SGGIQALMKGNAR--KLAEQ  216 (294)
Q Consensus       173 ~-------~---------------------~~~~~~---~~gv~r~V~vSs~~~~~~---~~~~~~~~~~~~~--~~~~~  216 (294)
                      .       +                     +.+.+.   +.+..+++++||..+..+   ......|..+|..  .+.+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~  160 (225)
T PRK08177         81 ISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRS  160 (225)
T ss_pred             ccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHH
Confidence            1       0                     111111   123467899988654322   1122234333321  11122


Q ss_pred             HHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcE
Q 022625          217 DESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLI  280 (294)
Q Consensus       217 ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~  280 (294)
                      ....+...+++++.|+||++. .+....          ...++.+..+..++..+++.. ..+..
T Consensus       161 l~~e~~~~~i~v~~i~PG~i~-t~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (225)
T PRK08177        161 FVAELGEPTLTVLSMHPGWVK-TDMGGD----------NAPLDVETSVKGLVEQIEAASGKGGHR  214 (225)
T ss_pred             HHHHhhcCCeEEEEEcCCcee-cCCCCC----------CCCCCHHHHHHHHHHHHHhCCccCCCc
Confidence            222233478999999999986 221110          123567777777777776654 23444

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.30  E-value=2.3e-10  Score=108.91  Aligned_cols=164  Identities=11%  Similarity=0.009  Sum_probs=104.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---CCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ...+|+++||||+|+||++++++|+++|++|+++.|++++..+..   ...++.+.+|++|.+.+.+.+.++|++||+++
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAG  254 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHG  254 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCC
Confidence            456899999999999999999999999999999999876654322   12467788999999999999999999999722


Q ss_pred             c----------h-----------------HHhhhhhcC----CCEEEEecccccccCCCCchhccchhHHHHHHHHHHHH
Q 022625          173 G----------F-----------------ISNAGSLKG----VQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESML  221 (294)
Q Consensus       173 ~----------~-----------------~~~~~~~~g----v~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l  221 (294)
                      .          +                 +...+++.+    -..+|++|+. ...+ .....|..+|..  ........
T Consensus       255 i~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa-~~~~-~~~~~Y~ASKaA--l~~l~~l~  330 (406)
T PRK07424        255 INVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEA-EVNP-AFSPLYELSKRA--LGDLVTLR  330 (406)
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccc-cccC-CCchHHHHHHHH--HHHHHHHH
Confidence            0          0                 111223332    1235555542 2222 112234333321  11111111


Q ss_pred             H-hCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          222 M-ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       222 ~-~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      + +.++.+..+.||.+....            .....++.||+|+.+++++.++.
T Consensus       331 ~~~~~~~I~~i~~gp~~t~~------------~~~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        331 RLDAPCVVRKLILGPFKSNL------------NPIGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             HhCCCCceEEEEeCCCcCCC------------CcCCCCCHHHHHHHHHHHHHCCC
Confidence            1 245666677776654111            11235799999999999997753

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.28  E-value=8.1e-11  Score=119.12  Aligned_cols=176  Identities=10%  Similarity=0.071  Sum_probs=109.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEcCC-
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE-  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~-  172 (294)
                      ....|+||||||+|+||++|+++|.++|++|..                  ..+|++|.+.+.+.+.  +.|+|||++. 
T Consensus       377 ~~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~  438 (668)
T PLN02260        377 GKPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------GKGRLEDRSSLLADIRNVKPTHVFNAAGV  438 (668)
T ss_pred             CCCCceEEEECCCchHHHHHHHHHHhCCCeEEe------------------eccccccHHHHHHHHHhhCCCEEEECCcc
Confidence            345679999999999999999999999998731                  1246788888888876  5799999821 


Q ss_pred             ----c--------------------hHHhhhhhcCCCEEEEecccccccC------C-C-Cch---hc-cc-hhHHHHHH
Q 022625          173 ----G--------------------FISNAGSLKGVQHVILLSQLSVYRG------S-G-GIQ---AL-MK-GNARKLAE  215 (294)
Q Consensus       173 ----~--------------------~~~~~~~~~gv~r~V~vSs~~~~~~------~-~-~~~---~~-~~-~~~~~~~~  215 (294)
                          .                    .++++|++.|++ +|++||..++..      . . +..   .. .+ +.+-..|.
T Consensus       439 ~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~  517 (668)
T PLN02260        439 TGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKA  517 (668)
T ss_pred             cCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHH
Confidence                0                    045668888985 566777655421      0 0 111   01 11 11223466


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCC-CCCcc-e-e-eccC---CCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTP-GGKQG-F-Q-FEEG---CAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-  287 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~-~~~~~-~-~-~~~g---~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-  287 (294)
                      .+|.+++.. -++.++|+.+++... ..... + . +...   ....+...++|++.+++.++..  ..+.+||+++++ 
T Consensus       518 ~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~vp~~~~~~~~~~~~~~~l~~~--~~~giyni~~~~~  594 (668)
T PLN02260        518 MVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKR--NLRGIWNFTNPGV  594 (668)
T ss_pred             HHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHhccceeeccCCCceehhhHHHHHHHHHHh--CCCceEEecCCCc
Confidence            788888765 356777777665321 11000 0 0 0000   0123567788899888888764  225799999975 


Q ss_pred             cccccc
Q 022625          288 NLCEQL  293 (294)
Q Consensus       288 ~~~~ei  293 (294)
                      .++.|+
T Consensus       595 ~s~~e~  600 (668)
T PLN02260        595 VSHNEI  600 (668)
T ss_pred             CcHHHH
Confidence            555543

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.28  E-value=2.5e-11  Score=100.82  Aligned_cols=136  Identities=18%  Similarity=0.210  Sum_probs=103.3

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc-
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-  170 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~-  170 (294)
                      +..+.+|.++|.||||-.|+.+++.+++++  -+|+++.|.+..-. .....+.....|....+++...+++.|+.||+ 
T Consensus        13 Df~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~-at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaL   91 (238)
T KOG4039|consen   13 DFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP-ATDKVVAQVEVDFSKLSQLATNEQGPDVLFCAL   91 (238)
T ss_pred             HHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc-cccceeeeEEechHHHHHHHhhhcCCceEEEee
Confidence            356778999999999999999999999987  48999988752211 12235667778988888899999999999998 


Q ss_pred             --------CCch----------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCC-CEEEE
Q 022625          171 --------SEGF----------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGI-PYTII  231 (294)
Q Consensus       171 --------~~~~----------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl-~~tiv  231 (294)
                              .++|          .++++++.|+++||++||.++...+...  |+.     .+-+.|.-+.+-++ .++|+
T Consensus        92 gTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sSrFl--Y~k-----~KGEvE~~v~eL~F~~~~i~  164 (238)
T KOG4039|consen   92 GTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSSRFL--YMK-----MKGEVERDVIELDFKHIIIL  164 (238)
T ss_pred             cccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCccccee--eee-----ccchhhhhhhhccccEEEEe
Confidence                    1232          5677899999999999999887655433  322     24456666666554 58999


Q ss_pred             Ecccee
Q 022625          232 RTGVLQ  237 (294)
Q Consensus       232 RPg~l~  237 (294)
                      |||.+.
T Consensus       165 RPG~ll  170 (238)
T KOG4039|consen  165 RPGPLL  170 (238)
T ss_pred             cCccee
Confidence            999876

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.28  E-value=4.9e-10  Score=101.31  Aligned_cols=193  Identities=16%  Similarity=0.098  Sum_probs=127.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---------CCCcEEeecCCCCHHHHHHHh-----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---------GTYVESMAGDASNKKFLKTAL-----  161 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~v~~v~~D~~d~~~l~~~l-----  161 (294)
                      .+.+|+++|||++.+||+++|++|++.|.+|++..|++++..+..         +..+..+.+|+++.+.+++++     
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999988643321         235788999999886655443     


Q ss_pred             ---cCCcEEEEcCCc------h--------------------------HHhhhhhcCCCEEEEecccccccCCCCc-hhc
Q 022625          162 ---RGVRSIICPSEG------F--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI-QAL  205 (294)
Q Consensus       162 ---~~~d~Vi~~~~~------~--------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~-~~~  205 (294)
                         -..|++|++++.      .                          .....++.+-..++++||.....+.... ..|
T Consensus        85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y  164 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAY  164 (270)
T ss_pred             HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccc
Confidence               346999997221      0                          0112345566789999998776553332 344


Q ss_pred             cchhH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCC-C-------cceee--ccCC-CCCCCcCHHHHHHHHHHHhh
Q 022625          206 MKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGG-K-------QGFQF--EEGC-AANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       206 ~~~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~-~-------~~~~~--~~g~-~~~~~Is~eDvA~~iv~aL~  272 (294)
                      ..+|.  ..+.+.....+...|+++..|-||.+...... .       .....  .... ........+|+|..+++++.
T Consensus       165 ~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fla~  244 (270)
T KOG0725|consen  165 GVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFLAS  244 (270)
T ss_pred             hhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhhcC
Confidence            33332  22344455556678999999999987643210 0       00000  1111 22344578999999998876


Q ss_pred             CCC--CCCcEEEEecCCc
Q 022625          273 SIP--QTGLIFEVCEISN  288 (294)
Q Consensus       273 ~~~--~~g~~~~v~~g~~  288 (294)
                      ...  ..|+.+.+.+|-.
T Consensus       245 ~~asyitG~~i~vdgG~~  262 (270)
T KOG0725|consen  245 DDASYITGQTIIVDGGFT  262 (270)
T ss_pred             cccccccCCEEEEeCCEE
Confidence            643  3567777766643

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.28  E-value=5.1e-11  Score=102.59  Aligned_cols=178  Identities=14%  Similarity=0.144  Sum_probs=120.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCC--cEEEEc---
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICP---  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~--d~Vi~~---  170 (294)
                      +++|+|||++|.+|++|.+-+..+|+   +.+..               ..-.+|+++.+..+++|+..  -.|||+   
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~---------------~skd~DLt~~a~t~~lF~~ekPthVIhlAAm   65 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI---------------GSKDADLTNLADTRALFESEKPTHVIHLAAM   65 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEe---------------ccccccccchHHHHHHHhccCCceeeehHhh
Confidence            47999999999999999999999886   22111               11247899999999999755  778886   


Q ss_pred             CCch--------------------HHhhhhhcCCCEEEEecccccccC--CCCc------------hhccchhHHHHHH-
Q 022625          171 SEGF--------------------ISNAGSLKGVQHVILLSQLSVYRG--SGGI------------QALMKGNARKLAE-  215 (294)
Q Consensus       171 ~~~~--------------------~~~~~~~~gv~r~V~vSs~~~~~~--~~~~------------~~~~~~~~~~~~~-  215 (294)
                      .+|.                    +...|-+.|++++|+.-|.+.+..  +.++            ..+..+.++.+.. 
T Consensus        66 VGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv  145 (315)
T KOG1431|consen   66 VGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDV  145 (315)
T ss_pred             hcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHH
Confidence            2332                    333577889999999988877641  1111            1111122222211 


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCC-------------------------CCcceeeccCCCCCCCcCHHHHHHHHHHH
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPG-------------------------GKQGFQFEEGCAANGSLSKEDAAFICVEA  270 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~-------------------------~~~~~~~~~g~~~~~~Is~eDvA~~iv~a  270 (294)
                      ....|.++.|..+|.+-|..++ +|.                         ......|+.|.....+|+.+|+|++++++
T Consensus       146 ~n~aY~~qhg~~~tsviPtNvf-GphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~v  224 (315)
T KOG1431|consen  146 QNQAYRQQHGRDYTSVIPTNVF-GPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWV  224 (315)
T ss_pred             HHHHHHHHhCCceeeecccccc-CCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHH
Confidence            2355666789999999999887 442                         12335678889999999999999999999


Q ss_pred             hhCCCCCCcEEEEecC---Ccccccc
Q 022625          271 LESIPQTGLIFEVCEI---SNLCEQL  293 (294)
Q Consensus       271 L~~~~~~g~~~~v~~g---~~~~~ei  293 (294)
                      |.+-+... -.+++.|   +.+|+|.
T Consensus       225 lr~Y~~vE-piils~ge~~EVtI~e~  249 (315)
T KOG1431|consen  225 LREYEGVE-PIILSVGESDEVTIREA  249 (315)
T ss_pred             HHhhcCcc-ceEeccCccceeEHHHH
Confidence            98755432 3344443   4555553

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.27  E-value=2.2e-11  Score=104.95  Aligned_cols=179  Identities=18%  Similarity=0.154  Sum_probs=128.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCch---
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF---  174 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~---  174 (294)
                      --+.++.|++|+.|+++|+.....++.|..+.|+..+ ..+.++.++.+..+|.....-++..+.+...++-++.++   
T Consensus        52 ~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~  131 (283)
T KOG4288|consen   52 VEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNI  131 (283)
T ss_pred             HHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccch
Confidence            4678999999999999999999999999999999764 333455688889998877666677777777777664432   


Q ss_pred             -------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHh-CCCCEEEEEccceecCC
Q 022625          175 -------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA-SGIPYTIIRTGVLQNTP  240 (294)
Q Consensus       175 -------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~-~gl~~tivRPg~l~~~~  240 (294)
                                   ...++.+.|+++|||+|.....-+..-+..|..     -||++|..+.. .+.+-+++|||++++.-
T Consensus       132 ~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~~~~~~i~rGY~~-----gKR~AE~Ell~~~~~rgiilRPGFiyg~R  206 (283)
T KOG4288|consen  132 ILMDRINGTANINAVKAAAKAGVPRFVYISAHDFGLPPLIPRGYIE-----GKREAEAELLKKFRFRGIILRPGFIYGTR  206 (283)
T ss_pred             HHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhcCCCCccchhhhc-----cchHHHHHHHHhcCCCceeeccceeeccc
Confidence                         234577889999999997654333333333433     37778777655 67889999999998532


Q ss_pred             C-CCcc---------------------e-eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEE
Q 022625          241 G-GKQG---------------------F-QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEV  283 (294)
Q Consensus       241 ~-~~~~---------------------~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v  283 (294)
                      . .+..                     . ....|.-....+.+++||.+.+.++++|.-. .++.|
T Consensus       207 ~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~-Gvv~i  271 (283)
T KOG4288|consen  207 NVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFK-GVVTI  271 (283)
T ss_pred             ccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcC-ceeeH
Confidence            1 0000                     0 0113444567789999999999999998765 34443

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.26  E-value=2.4e-10  Score=105.04  Aligned_cols=187  Identities=12%  Similarity=0.028  Sum_probs=112.4

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEEcCccchhhh--------------cC-----CCcEEeecCC--CC
Q 022625           97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------------FG-----TYVESMAGDA--SN  153 (294)
Q Consensus        97 ~~~~~vlVtGa--tG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------------~~-----~~v~~v~~D~--~d  153 (294)
                      +.+|+++||||  +.+||.++++.|+++|++|++ .|+.++++..              ..     .....+.+|+  ++
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT   85 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence            67999999999  799999999999999999988 6654332111              01     1135677888  32


Q ss_pred             ------------------HHHHHHHh-------cCCcEEEEcCC------c-h-------------------------HH
Q 022625          154 ------------------KKFLKTAL-------RGVRSIICPSE------G-F-------------------------IS  176 (294)
Q Consensus       154 ------------------~~~l~~~l-------~~~d~Vi~~~~------~-~-------------------------~~  176 (294)
                                        .+++++++       ..+|++||+.+      + +                         +.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~  165 (303)
T PLN02730         86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG  165 (303)
T ss_pred             cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence                              22444443       34699999841      1 1                         11


Q ss_pred             hhhhhcCCCEEEEecccccccCCCCch-hccchhHH--HHHHHHHHHHHh-CCCCEEEEEccceecCCCCCcce-----e
Q 022625          177 NAGSLKGVQHVILLSQLSVYRGSGGIQ-ALMKGNAR--KLAEQDESMLMA-SGIPYTIIRTGVLQNTPGGKQGF-----Q  247 (294)
Q Consensus       177 ~~~~~~gv~r~V~vSs~~~~~~~~~~~-~~~~~~~~--~~~~~ae~~l~~-~gl~~tivRPg~l~~~~~~~~~~-----~  247 (294)
                      ..+++ + .++|++||..+..+....+ .|..+|.-  .+.+.....+.. .|++++.|.||.+..........     .
T Consensus       166 p~m~~-~-G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~  243 (303)
T PLN02730        166 PIMNP-G-GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIE  243 (303)
T ss_pred             HHHhc-C-CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHHH
Confidence            12333 2 6899999987655433222 45444321  122333333433 68999999999876322111000     0


Q ss_pred             -eccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          248 -FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       248 -~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                       +........+..++|+|.++++++....  ..|+.+.+.+|
T Consensus       244 ~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG  285 (303)
T PLN02730        244 YSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNG  285 (303)
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence             0011111334689999999999987543  46788887665

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.26  E-value=1.6e-10  Score=95.54  Aligned_cols=136  Identities=21%  Similarity=0.261  Sum_probs=93.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhh---------cCCCcEEeecCCCCHHHHHHHhcC------
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---------FGTYVESMAGDASNKKFLKTALRG------  163 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---------~~~~v~~v~~D~~d~~~l~~~l~~------  163 (294)
                      ++++||||+|+||.+++++|+++|+ .|+++.|++++....         .+.++.++.+|+++.+.+++++..      
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999996 688888876542211         123577889999999888776543      


Q ss_pred             -CcEEEEcCC-----c--------h-------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHH
Q 022625          164 -VRSIICPSE-----G--------F-------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ  216 (294)
Q Consensus       164 -~d~Vi~~~~-----~--------~-------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~  216 (294)
                       +|++||+.+     .        +             +.++++..+.+++|++||..+..+......|..++  .....
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk--~~~~~  158 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQANYAAAN--AFLDA  158 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCchhhHHHH--HHHHH
Confidence             599999732     0        0             23345556778999999987654444444443322  22222


Q ss_pred             HHHHHHhCCCCEEEEEcccee
Q 022625          217 DESMLMASGIPYTIIRTGVLQ  237 (294)
Q Consensus       217 ae~~l~~~gl~~tivRPg~l~  237 (294)
                      ....+...+++++.+.||.+.
T Consensus       159 ~~~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      159 LAAHRRARGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHhcCCceEEEeecccc
Confidence            224456689999999998764

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN00015 protochlorophyllide reductase

Probab=99.26  E-value=1.4e-10  Score=106.62  Aligned_cols=182  Identities=13%  Similarity=0.174  Sum_probs=110.4

Q ss_pred             EEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchhhh---c---CCCcEEeecCCCCHHHHHHHhc-------CCcEEE
Q 022625          103 LVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---F---GTYVESMAGDASNKKFLKTALR-------GVRSII  168 (294)
Q Consensus       103 lVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~~---~---~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi  168 (294)
                      +||||+++||.+++++|+++| ++|++.+|+.++..+.   .   +..+.++.+|++|.++++++++       .+|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 9999999987654322   1   2357788999999988877653       469999


Q ss_pred             EcCCc------h-------------------------HHhhhhhcC--CCEEEEecccccccCC----------------
Q 022625          169 CPSEG------F-------------------------ISNAGSLKG--VQHVILLSQLSVYRGS----------------  199 (294)
Q Consensus       169 ~~~~~------~-------------------------~~~~~~~~g--v~r~V~vSs~~~~~~~----------------  199 (294)
                      |+++-      .                         +...+.+.+  ..+||++||..+..+.                
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            97210      0                         112233443  4799999997653210                


Q ss_pred             -------------------CCchhccchhHHH--H-HHHHHHHHHhCCCCEEEEEcccee-cCCCCCcc--ee--ec--c
Q 022625          200 -------------------GGIQALMKGNARK--L-AEQDESMLMASGIPYTIIRTGVLQ-NTPGGKQG--FQ--FE--E  250 (294)
Q Consensus       200 -------------------~~~~~~~~~~~~~--~-~~~ae~~l~~~gl~~tivRPg~l~-~~~~~~~~--~~--~~--~  250 (294)
                                         .....|..+|...  + +..+.++....|+.++.|+||++. ........  ..  ++  .
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~  240 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQ  240 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHHH
Confidence                               0122233333221  1 111111111258999999999984 22211100  00  00  0


Q ss_pred             CCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          251 GCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       251 g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                      ........++++.|..+++++.++.  ..|..|...
T Consensus       241 ~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~  276 (308)
T PLN00015        241 KYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWN  276 (308)
T ss_pred             HHHhcccccHHHhhhhhhhhccccccCCCccccccC
Confidence            0111235789999999999887643  345655543

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.22  E-value=2.2e-10  Score=96.69  Aligned_cols=191  Identities=17%  Similarity=0.128  Sum_probs=122.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---CC--CcEEeecCCCCHHHHHHHhc-------C
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GT--YVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~--~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      .+..+.++||||+.+||+++++.|++.|++|.+..++...+++..   +.  +-..+.+|+++...++..++       .
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            445688999999999999999999999999999998876554432   22  34567899999877766554       3


Q ss_pred             CcEEEEcCC----ch----------------------H----Hhhh--hhcCCCEEEEecccccccCCCCchhccchhH-
Q 022625          164 VRSIICPSE----GF----------------------I----SNAG--SLKGVQHVILLSQLSVYRGSGGIQALMKGNA-  210 (294)
Q Consensus       164 ~d~Vi~~~~----~~----------------------~----~~~~--~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~-  210 (294)
                      .+++++|++    ++                      .    ..++  ...+.-+||++||.-......+-..|..++. 
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~G  170 (256)
T KOG1200|consen   91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGG  170 (256)
T ss_pred             CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCc
Confidence            489998822    11                      1    1111  1223348999999865433333333332221 


Q ss_pred             -HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-ce----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEE
Q 022625          211 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GF----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE  282 (294)
Q Consensus       211 -~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~~----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~  282 (294)
                       ..+.+.+.+.+...+|++..|.||++. .|-+.. +.    .+.....-...=..||+|..+.++.....  ..|..++
T Consensus       171 vIgftktaArEla~knIrvN~VlPGFI~-tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiTG~t~e  249 (256)
T KOG1200|consen  171 VIGFTKTAARELARKNIRVNVVLPGFIA-TPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASSYITGTTLE  249 (256)
T ss_pred             eeeeeHHHHHHHhhcCceEeEecccccc-ChhhhhcCHHHHHHHHccCCccccCCHHHHHHHHHHHhccccccccceeEE
Confidence             123345556677899999999999987 322111 00    01111111222357999999998876544  3689999


Q ss_pred             EecCC
Q 022625          283 VCEIS  287 (294)
Q Consensus       283 v~~g~  287 (294)
                      +++|-
T Consensus       250 vtGGl  254 (256)
T KOG1200|consen  250 VTGGL  254 (256)
T ss_pred             Eeccc
Confidence            98873

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.20  E-value=3.2e-10  Score=104.38  Aligned_cols=181  Identities=14%  Similarity=0.075  Sum_probs=111.6

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh--------cCCCcEEeecCCCCHHHHHHHhc---
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR---  162 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~v~~v~~D~~d~~~l~~~l~---  162 (294)
                      .....+++++|||||++||.+++++|+.+|.+|++.+|+.++..+.        ....+.++++|++|.++++++.+   
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            4556779999999999999999999999999999999998654432        12467889999999999987764   


Q ss_pred             ----CCcEEEEcCC-----------ch-----------------HHhhhhhcCCCEEEEeccccccc-----CCCCch--
Q 022625          163 ----GVRSIICPSE-----------GF-----------------ISNAGSLKGVQHVILLSQLSVYR-----GSGGIQ--  203 (294)
Q Consensus       163 ----~~d~Vi~~~~-----------~~-----------------~~~~~~~~gv~r~V~vSs~~~~~-----~~~~~~--  203 (294)
                          ..|++|++++           |+                 +.+.++.....|||++||.....     .-.+..  
T Consensus       110 ~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~  189 (314)
T KOG1208|consen  110 KKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAK  189 (314)
T ss_pred             hcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhcc
Confidence                3499998621           21                 34456666668999999976411     000101  


Q ss_pred             ------hccchhHHHHHHHHHHHHHh--CCCCEEEEEccceecCCCCC-cce-eeccCCCCCCC-cCHHHHHHHHHHHhh
Q 022625          204 ------ALMKGNARKLAEQDESMLMA--SGIPYTIIRTGVLQNTPGGK-QGF-QFEEGCAANGS-LSKEDAAFICVEALE  272 (294)
Q Consensus       204 ------~~~~~~~~~~~~~ae~~l~~--~gl~~tivRPg~l~~~~~~~-~~~-~~~~g~~~~~~-Is~eDvA~~iv~aL~  272 (294)
                            .|..++... ...+.++.+.  .|+..+.+.||.+....-.. ... .+....-.+.+ -+.+.-|..++.++.
T Consensus       190 ~~~~~~~Y~~SKla~-~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~~~~~ks~~~ga~t~~~~a~  268 (314)
T KOG1208|consen  190 LYSSDAAYALSKLAN-VLLANELAKRLKKGVTTYSVHPGVVKTTGLSRVNLLLRLLAKKLSWPLTKSPEQGAATTCYAAL  268 (314)
T ss_pred             CccchhHHHHhHHHH-HHHHHHHHHHhhcCceEEEECCCcccccceecchHHHHHHHHHHHHHhccCHHHHhhheehhcc
Confidence                  122222111 0111222221  28999999999877321111 000 00000000111 256778888888887


Q ss_pred             CCC
Q 022625          273 SIP  275 (294)
Q Consensus       273 ~~~  275 (294)
                      +|+
T Consensus       269 ~p~  271 (314)
T KOG1208|consen  269 SPE  271 (314)
T ss_pred             Ccc
Confidence            774

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.17  E-value=2.6e-10  Score=98.39  Aligned_cols=192  Identities=18%  Similarity=0.141  Sum_probs=129.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchh------hhcC-CCcEEeecCCCCHHHHHHHhcC------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESFG-TYVESMAGDASNKKFLKTALRG------  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~------~~~~-~~v~~v~~D~~d~~~l~~~l~~------  163 (294)
                      ..||.+++||+.|+||.+++++|+.+|..+.++..+.+..+      +.++ ..+.|+++|+++..+++++++.      
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999888877766522      2233 3788999999999888887763      


Q ss_pred             -CcEEEEcCCc----------------h------HHhhhh-hc-C-CCEEEEecccccccCCCCchhccchhH--HHHHH
Q 022625          164 -VRSIICPSEG----------------F------ISNAGS-LK-G-VQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE  215 (294)
Q Consensus       164 -~d~Vi~~~~~----------------~------~~~~~~-~~-g-v~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~  215 (294)
                       .|++|+.++=                .      ..+.+. +. | -.-+|.+||.....|.+..-.|..+++  ..+.|
T Consensus        83 ~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTR  162 (261)
T KOG4169|consen   83 TIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTR  162 (261)
T ss_pred             ceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeeh
Confidence             4999986220                0      112222 22 2 346899999988776655444443332  11122


Q ss_pred             --HHHHHHHhCCCCEEEEEccceecCCC---CCcceeeccC------CCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 022625          216 --QDESMLMASGIPYTIIRTGVLQNTPG---GKQGFQFEEG------CAANGSLSKEDAAFICVEALESIPQTGLIFEVC  284 (294)
Q Consensus       216 --~ae~~l~~~gl~~tivRPg~l~~~~~---~~~~~~~~~g------~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~  284 (294)
                        +-+.+.+.+|+++..++||..-....   +.....+..+      -...+..+..++|..++.+++. ..+|.+|.+.
T Consensus       163 Sla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~-~~NGaiw~v~  241 (261)
T KOG4169|consen  163 SLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEY-PKNGAIWKVD  241 (261)
T ss_pred             hhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhh-ccCCcEEEEe
Confidence              23667788999999999997431110   0001111111      1224456889999999999998 6668899998


Q ss_pred             cCCcc
Q 022625          285 EISNL  289 (294)
Q Consensus       285 ~g~~~  289 (294)
                      .+...
T Consensus       242 ~g~l~  246 (261)
T KOG4169|consen  242 SGSLE  246 (261)
T ss_pred             cCcEE
Confidence            87643

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.15  E-value=4.1e-10  Score=93.50  Aligned_cols=188  Identities=16%  Similarity=0.137  Sum_probs=127.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC---CCcEEeecCCCCHHHHHHHhcCC---cEEEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG---TYVESMAGDASNKKFLKTALRGV---RSIIC  169 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~v~~v~~D~~d~~~l~~~l~~~---d~Vi~  169 (294)
                      .+.|+.|+|||+.-+||++++++|++.|.+|+++.|++..+..+..   ..++.+++|+++-+.+.+.+..+   |.+++
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVN   83 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVN   83 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhc
Confidence            4578999999999999999999999999999999999988776543   35889999999988888877644   77776


Q ss_pred             cCC-----ch---------------------HHh-----hhhhcCCCEEEEecccccccCCCCchhccchhH-HHH-HHH
Q 022625          170 PSE-----GF---------------------ISN-----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-RKL-AEQ  216 (294)
Q Consensus       170 ~~~-----~~---------------------~~~-----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~-~~~-~~~  216 (294)
                      .++     .|                     +.+     +..+.-...||.+||.+..++-.....|...+. ..+ .+.
T Consensus        84 NAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~  163 (245)
T KOG1207|consen   84 NAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKC  163 (245)
T ss_pred             cchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHHH
Confidence            511     11                     111     122233346999999988887766666655543 221 223


Q ss_pred             HHHHHHhCCCCEEEEEccceecCCCCCcceeeccC---------CCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          217 DESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEG---------CAANGSLSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       217 ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g---------~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                      ....|-...|++..+.|..+....+...   |...         .....+--+++|..++.++|.+..  ..|...-+.+
T Consensus       164 lAlELGp~kIRVNsVNPTVVmT~MG~dn---WSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmttGstlpveG  240 (245)
T KOG1207|consen  164 LALELGPQKIRVNSVNPTVVMTDMGRDN---WSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTTGSTLPVEG  240 (245)
T ss_pred             HHHhhCcceeEeeccCCeEEEecccccc---cCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcCcccCceeeecC
Confidence            3333344679999999998774443211   1111         122334457899999999887755  4566666655


Q ss_pred             C
Q 022625          286 I  286 (294)
Q Consensus       286 g  286 (294)
                      |
T Consensus       241 G  241 (245)
T KOG1207|consen  241 G  241 (245)
T ss_pred             C
Confidence            4

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.14  E-value=1.3e-10  Score=102.64  Aligned_cols=179  Identities=13%  Similarity=0.108  Sum_probs=118.0

Q ss_pred             cCC--ChHHHHHHHHHHHCCCeEEEEEcCccch----hhhcC-CCcEEeecCCCCHHHHHHHh--------cCCcEEEEc
Q 022625          106 DGD--SDIGQMVILSLIVKRTRIKALVKDKRNA----MESFG-TYVESMAGDASNKKFLKTAL--------RGVRSIICP  170 (294)
Q Consensus       106 Gat--G~IG~~l~~~L~~~g~~V~~~~R~~~~~----~~~~~-~~v~~v~~D~~d~~~l~~~l--------~~~d~Vi~~  170 (294)
                      |++  ++||+.++++|+++|++|++..|+.++.    .+... .+.+++.+|++|++++++++        ..+|++||+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            666  9999999999999999999999998863    22211 23557999999998887664        456999987


Q ss_pred             ----CC-----ch-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHHH
Q 022625          171 ----SE-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA  214 (294)
Q Consensus       171 ----~~-----~~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~  214 (294)
                          ..     .+                         +...+++.  .++|++||.....+......|...|.  ..+.
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~l~  158 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEGLT  158 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHHHH
Confidence                11     11                         11122232  68999999877666555555544332  2233


Q ss_pred             HHHHHHHHh-CCCCEEEEEccceecCCCC-----Cccee-eccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          215 EQDESMLMA-SGIPYTIIRTGVLQNTPGG-----KQGFQ-FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       215 ~~ae~~l~~-~gl~~tivRPg~l~~~~~~-----~~~~~-~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                      +.....+.. .||+++.|.||++......     ..... +............+|||.++++++.+..  ..|+++.+.+
T Consensus       159 r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~vDG  238 (241)
T PF13561_consen  159 RSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPVDG  238 (241)
T ss_dssp             HHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEEST
T ss_pred             HHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEECC
Confidence            444444556 8999999999998732110     00000 0111222334689999999999998653  5789998877


Q ss_pred             C
Q 022625          286 I  286 (294)
Q Consensus       286 g  286 (294)
                      |
T Consensus       239 G  239 (241)
T PF13561_consen  239 G  239 (241)
T ss_dssp             T
T ss_pred             C
Confidence            6

...

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.14  E-value=1.4e-09  Score=93.95  Aligned_cols=176  Identities=18%  Similarity=0.219  Sum_probs=114.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEE-EEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc-------
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIK-ALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~-g~~V~-~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      ..+.|+||||+.+||..|+++|++. |.+++ +.+|+++++.+..      .+++++++.|+++.+++.++.+       
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            3467999999999999999999975 55554 4577788743221      3589999999999988887764       


Q ss_pred             --CCcEEEEcCCc--------------h-----------------HHhhhhhcCCC-----------EEEEecccccccC
Q 022625          163 --GVRSIICPSEG--------------F-----------------ISNAGSLKGVQ-----------HVILLSQLSVYRG  198 (294)
Q Consensus       163 --~~d~Vi~~~~~--------------~-----------------~~~~~~~~gv~-----------r~V~vSs~~~~~~  198 (294)
                        +.|.+|++++-              +                 +..+.++...+           .||++||......
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~  161 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG  161 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence              44777775210              0                 12223333333           6888998876533


Q ss_pred             C---CCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          199 S---GGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       199 ~---~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                      .   .++.+|.-+|..  ...+.....|+..++-++-|+||++..+.+.           ....+++|+-+.-++..+.+
T Consensus       162 ~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg-----------~~a~ltveeSts~l~~~i~k  230 (249)
T KOG1611|consen  162 GFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG-----------KKAALTVEESTSKLLASINK  230 (249)
T ss_pred             CCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC-----------CCcccchhhhHHHHHHHHHh
Confidence            2   233445444321  1122233334456777889999999855443           34567888888888887763


Q ss_pred             --CCCCCcEEEEe
Q 022625          274 --IPQTGLIFEVC  284 (294)
Q Consensus       274 --~~~~g~~~~v~  284 (294)
                        +.+.|..|+-.
T Consensus       231 L~~~hnG~ffn~d  243 (249)
T KOG1611|consen  231 LKNEHNGGFFNRD  243 (249)
T ss_pred             cCcccCcceEccC
Confidence              45677777653

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.14  E-value=2.1e-09  Score=102.69  Aligned_cols=192  Identities=17%  Similarity=0.231  Sum_probs=120.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEEcCccc------hhh------------hcC---CCcEEeecCCC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRN------AME------------SFG---TYVESMAGDAS  152 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~R~~~~------~~~------------~~~---~~v~~v~~D~~  152 (294)
                      ..+|+|+|||||||+|+.++..|++.-   -++.++.|....      ...            ..+   .++..+.||+.
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            468999999999999999999999753   378888886532      111            111   36788899997


Q ss_pred             CH------HHHHHHhcCCcEEEEcCCc--h-----------------HHhhhhhc-CCCEEEEecccccccCC-------
Q 022625          153 NK------KFLKTALRGVRSIICPSEG--F-----------------ISNAGSLK-GVQHVILLSQLSVYRGS-------  199 (294)
Q Consensus       153 d~------~~l~~~l~~~d~Vi~~~~~--~-----------------~~~~~~~~-gv~r~V~vSs~~~~~~~-------  199 (294)
                      ++      +.++...+.+|+|||+++.  |                 +.++|++. +.+-+|++||..+....       
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~  169 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKP  169 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccc
Confidence            65      4455677899999998432  1                 34455544 57889999997653110       


Q ss_pred             ---CC---ch-----------hcc-----------chhHHHHHHHHHHHHHh--CCCCEEEEEccceec---C--CC---
Q 022625          200 ---GG---IQ-----------ALM-----------KGNARKLAEQDESMLMA--SGIPYTIIRTGVLQN---T--PG---  241 (294)
Q Consensus       200 ---~~---~~-----------~~~-----------~~~~~~~~~~ae~~l~~--~gl~~tivRPg~l~~---~--~~---  241 (294)
                         +.   ..           .+.           +..+...|..+|+.+.+  .++|.+||||+.+..   .  |+   
T Consensus       170 y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWid  249 (467)
T KOG1221|consen  170 YPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWID  249 (467)
T ss_pred             cCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccc
Confidence               00   00           000           00001123467777765  679999999998652   1  12   


Q ss_pred             ---CCcceeec-----------cCCCCCCCcCHHHHHHHHHHHhhCCC-----CCCcEEEEecCCc
Q 022625          242 ---GKQGFQFE-----------EGCAANGSLSKEDAAFICVEALESIP-----QTGLIFEVCEISN  288 (294)
Q Consensus       242 ---~~~~~~~~-----------~g~~~~~~Is~eDvA~~iv~aL~~~~-----~~g~~~~v~~g~~  288 (294)
                         +..+..++           ..+.....|++|.++.+++.+...-.     ....+|+++++..
T Consensus       250 n~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~  315 (467)
T KOG1221|consen  250 NLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSND  315 (467)
T ss_pred             cCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEeccccc
Confidence               11112221           22345678899999999986653211     2246999998754

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.11  E-value=3.7e-10  Score=93.62  Aligned_cols=110  Identities=20%  Similarity=0.270  Sum_probs=80.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcC--ccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKD--KRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~--~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      |+++||||+++||++++++|+++| ..|+++.|+  .+...+.      ...++.++++|+++.++++++++       .
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            689999999999999999999995 577888888  3332222      23578999999999988877664       4


Q ss_pred             CcEEEEcCCch--------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchh
Q 022625          164 VRSIICPSEGF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN  209 (294)
Q Consensus       164 ~d~Vi~~~~~~--------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~  209 (294)
                      +|++||+.+..                          +...+...+-.+||++||.....+......|..++
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~ask  152 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPGMSAYSASK  152 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTTBHHHHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCCChhHHHHH
Confidence            59999983211                          11222335678999999998888777766665543

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.10  E-value=2.5e-09  Score=96.61  Aligned_cols=142  Identities=18%  Similarity=0.177  Sum_probs=105.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc----CCCcEEeecCCCCHHHHHHHhc---------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF----GTYVESMAGDASNKKFLKTALR---------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~v~~v~~D~~d~~~l~~~l~---------  162 (294)
                      ....|.|+|||+..+.|..+|++|.++|+.|.+-+-+++.++.+.    .+.+..++.|++++++++++.+         
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            445789999999999999999999999999999998776654432    3578889999999999988774         


Q ss_pred             CCcEEEEcCC--ch-----------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 GVRSIICPSE--GF-----------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 ~~d~Vi~~~~--~~-----------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      +.-.|||+++  ++                             +..+.+++ -.|+|++||..+-.+....++|..+|.-
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a-rGRvVnvsS~~GR~~~p~~g~Y~~SK~a  184 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA-RGRVVNVSSVLGRVALPALGPYCVSKFA  184 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-cCeEEEecccccCccCcccccchhhHHH
Confidence            3367777632  10                             12233444 3799999999886666666777666542


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceec
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQN  238 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~  238 (294)
                        .+.......+...|+++.+|-||++..
T Consensus       185 Veaf~D~lR~EL~~fGV~VsiiePG~f~T  213 (322)
T KOG1610|consen  185 VEAFSDSLRRELRPFGVKVSIIEPGFFKT  213 (322)
T ss_pred             HHHHHHHHHHHHHhcCcEEEEeccCcccc
Confidence              223344555667899999999997553

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.08  E-value=5.5e-09  Score=94.27  Aligned_cols=174  Identities=18%  Similarity=0.196  Sum_probs=121.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--------CCcEEeecCCCCHHHHHHHhcCC------
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--------TYVESMAGDASNKKFLKTALRGV------  164 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--------~~v~~v~~D~~d~~~l~~~l~~~------  164 (294)
                      ...|+|||++.++|..++..+..+|++|.++.|+.+++.+...        ..+.+..+|+.|.+++...+++.      
T Consensus        33 ~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   33 RRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             cceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence            3789999999999999999999999999999999988665432        13557889999998888777543      


Q ss_pred             -cEEEEcCCc----h--------------------------HHhhhhhcC-CCEEEEecccccccCCCCchhccchhH--
Q 022625          165 -RSIICPSEG----F--------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA--  210 (294)
Q Consensus       165 -d~Vi~~~~~----~--------------------------~~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~--  210 (294)
                       |.+||+++.    .                          .+.++++.. ..+|+++||..+.-+-.+..+|.+.+.  
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al  192 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL  192 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence             899988332    1                          111233322 449999999988777777778877654  


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-----ceeeccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          211 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-----GFQFEEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       211 ~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-----~~~~~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                      +.+.....+.+...++.++..-|+.+. .|+-..     ...--.-+...+.+..|++|.+++.-+.+
T Consensus       193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~-tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~~r  259 (331)
T KOG1210|consen  193 RGLAEALRQELIKYGVHVTLYYPPDTL-TPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKGMKR  259 (331)
T ss_pred             HHHHHHHHHHHhhcceEEEEEcCCCCC-CCccccccccCchheeeecCCCCCcCHHHHHHHHHhHHhh
Confidence            334445555566679999999888754 333111     11001112334568999999999987755

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.05  E-value=4.7e-09  Score=94.68  Aligned_cols=167  Identities=11%  Similarity=0.026  Sum_probs=113.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-------CCCcEEeecCCCCHH----HHHHHhcCCc--
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GTYVESMAGDASNKK----FLKTALRGVR--  165 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~v~~v~~D~~d~~----~l~~~l~~~d--  165 (294)
                      +++++|||||++||++.+++|+++|++|+++.|+++++....       +-+++++..|+++.+    .+++.+.+.|  
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg  128 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG  128 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence            489999999999999999999999999999999999865532       235788999998764    4666777765  


Q ss_pred             EEEEcCC------c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          166 SIICPSE------G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       166 ~Vi~~~~------~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      ++|++.+      . +                         +..-+.+.+-.-+|++||.....+.+.+..|..++..  
T Consensus       129 ILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v~  208 (312)
T KOG1014|consen  129 ILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFVD  208 (312)
T ss_pred             EEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHHH
Confidence            4555511      1 0                         1111344455679999999888777766666554431  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhh
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                      .+-+......+..|+.+-.+-|.++.........       ...-..+.+..|+-.+..+.
T Consensus       209 ~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~-------~sl~~ps~~tfaksal~tiG  262 (312)
T KOG1014|consen  209 FFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK-------PSLFVPSPETFAKSALNTIG  262 (312)
T ss_pred             HHHHHHHHHHHhcCeEEEEeehhheeccccccCC-------CCCcCcCHHHHHHHHHhhcC
Confidence            1223445555678999999999988743322111       12233455666666666554

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.05  E-value=6.3e-09  Score=88.31  Aligned_cols=145  Identities=13%  Similarity=0.075  Sum_probs=104.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-----CCCcEEeecCCCCHHHHHHHhcC-------CcEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALRG-------VRSI  167 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~v~~v~~D~~d~~~l~~~l~~-------~d~V  167 (294)
                      |+++||||+|++|. +++.|+++|++|+++.|++++.....     ...+.++.+|++|.+++.+++++       .|.+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            57999999987765 99999999999999999876644321     23678889999999888877653       4788


Q ss_pred             EEc----CCchHHhhhhhcCCC----EEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecC
Q 022625          168 ICP----SEGFISNAGSLKGVQ----HVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT  239 (294)
Q Consensus       168 i~~----~~~~~~~~~~~~gv~----r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~  239 (294)
                      |+.    ....+..+|++.|++    +|+++=...+.++..               .. ..+......|--|..|++.++
T Consensus        80 v~~vh~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~~~---------------~~-~~~~~~~~~~~~i~lgf~~~~  143 (177)
T PRK08309         80 VAWIHSSAKDALSVVCRELDGSSETYRLFHVLGSAASDPRI---------------PS-EKIGPARCSYRRVILGFVLED  143 (177)
T ss_pred             EEeccccchhhHHHHHHHHccCCCCceEEEEeCCcCCchhh---------------hh-hhhhhcCCceEEEEEeEEEeC
Confidence            866    345588889999999    898883322211100               11 123335678888889988733


Q ss_pred             CCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          240 PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       240 ~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      .             ..-|++-+++++.++.+++.+
T Consensus       144 ~-------------~~rwlt~~ei~~gv~~~~~~~  165 (177)
T PRK08309        144 T-------------YSRWLTHEEISDGVIKAIESD  165 (177)
T ss_pred             C-------------ccccCchHHHHHHHHHHHhcC
Confidence            2             134688899999999999764

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.02  E-value=9.6e-09  Score=87.32  Aligned_cols=134  Identities=23%  Similarity=0.272  Sum_probs=88.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCcc-c------hhh--hcCCCcEEeecCCCCHHHHHHHhcCC------
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-N------AME--SFGTYVESMAGDASNKKFLKTALRGV------  164 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~-~------~~~--~~~~~v~~v~~D~~d~~~l~~~l~~~------  164 (294)
                      +++|||+.|+||..+++.|+.++. +|+++.|+.. .      ..+  ..+..++++.+|++|++.+.+++..+      
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            689999999999999999999975 8999999832 1      111  12357889999999999999988644      


Q ss_pred             -cEEEEcCC----ch----------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHH
Q 022625          165 -RSIICPSE----GF----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQD  217 (294)
Q Consensus       165 -d~Vi~~~~----~~----------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~a  217 (294)
                       +.|||+.+    ..                      +.++.....++.||+.||....-...+...|.....  +....
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq~~YaaAN~--~lda~  159 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQSAYAAANA--FLDAL  159 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTBHHHHHHHH--HHHHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcchHhHHHHHH--HHHHH
Confidence             78999821    10                      333455568899999999987554445445533222  22222


Q ss_pred             HHHHHhCCCCEEEEEccce
Q 022625          218 ESMLMASGIPYTIIRTGVL  236 (294)
Q Consensus       218 e~~l~~~gl~~tivRPg~l  236 (294)
                      -...+..|.+++.|.-+..
T Consensus       160 a~~~~~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  160 ARQRRSRGLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHTTSEEEEEEE-EB
T ss_pred             HHHHHhCCCCEEEEEcccc
Confidence            3344567899998887654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.00  E-value=9e-09  Score=91.05  Aligned_cols=137  Identities=16%  Similarity=0.223  Sum_probs=93.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-----hhhhcC----CCcEEeecCCCC-HHHHHHHhc----
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESFG----TYVESMAGDASN-KKFLKTALR----  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~~----~~v~~v~~D~~d-~~~l~~~l~----  162 (294)
                      ..+++++||||+++||+++++.|+++|++|+++.|..+.     ..+...    ..+.+..+|+++ .++++.+++    
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999988887543     222222    356777899998 877665543    


Q ss_pred             ---CCcEEEEcCC------ch---------------------HHh----hhhhcCCCEEEEecccccccCCCCc-hhccc
Q 022625          163 ---GVRSIICPSE------GF---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGI-QALMK  207 (294)
Q Consensus       163 ---~~d~Vi~~~~------~~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~-~~~~~  207 (294)
                         .+|++|++.+      .+                     +..    .++ .  ++||++||.... +.... ..|..
T Consensus        83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~--~~Iv~isS~~~~-~~~~~~~~Y~~  158 (251)
T COG1028          83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK-K--QRIVNISSVAGL-GGPPGQAAYAA  158 (251)
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh-h--CeEEEECCchhc-CCCCCcchHHH
Confidence               3698888722      11                     011    112 1  199999999877 55443 56655


Q ss_pred             hhHH--HHHHHHHHHHHhCCCCEEEEEcccee
Q 022625          208 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQ  237 (294)
Q Consensus       208 ~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~  237 (294)
                      +|..  .+.+.....+...|+.++.|.||.+.
T Consensus       159 sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~  190 (251)
T COG1028         159 SKAALIGLTKALALELAPRGIRVNAVAPGYID  190 (251)
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence            5432  12233334455678999999999544

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.00  E-value=2.3e-08  Score=91.81  Aligned_cols=189  Identities=12%  Similarity=0.048  Sum_probs=105.1

Q ss_pred             cCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCc---------cchh--hh----cCC---------------C
Q 022625           96 EEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDK---------RNAM--ES----FGT---------------Y  143 (294)
Q Consensus        96 ~~~~~~vlVtGat--G~IG~~l~~~L~~~g~~V~~~~R~~---------~~~~--~~----~~~---------------~  143 (294)
                      ...+|+++||||+  .+||++++++|+++|++|++..+.+         +...  ..    .+.               .
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~   84 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT   84 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence            4568999999995  8999999999999999999876432         1000  00    000               1


Q ss_pred             cEEeecCCCC--------HHHHHHHh-------cCCcEEEEcCC------c-h-------------------------HH
Q 022625          144 VESMAGDASN--------KKFLKTAL-------RGVRSIICPSE------G-F-------------------------IS  176 (294)
Q Consensus       144 v~~v~~D~~d--------~~~l~~~l-------~~~d~Vi~~~~------~-~-------------------------~~  176 (294)
                      .+-+..|+.+        .+++++++       ..+|++||+.+      . +                         +.
T Consensus        85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~  164 (299)
T PRK06300         85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG  164 (299)
T ss_pred             CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            1122222222        11233333       35799999731      1 1                         11


Q ss_pred             hhhhhcCCCEEEEecccccccCCCCch-hccchhHH--HHHHHHHHHHHh-CCCCEEEEEccceecCCCCCc----ce--
Q 022625          177 NAGSLKGVQHVILLSQLSVYRGSGGIQ-ALMKGNAR--KLAEQDESMLMA-SGIPYTIIRTGVLQNTPGGKQ----GF--  246 (294)
Q Consensus       177 ~~~~~~gv~r~V~vSs~~~~~~~~~~~-~~~~~~~~--~~~~~ae~~l~~-~gl~~tivRPg~l~~~~~~~~----~~--  246 (294)
                      ..+++.  .++|++||.....+..... .|..+|.-  .+.+.....+.. .|++++.|.||.+........    ..  
T Consensus       165 p~m~~~--G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~  242 (299)
T PRK06300        165 PIMNPG--GSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVD  242 (299)
T ss_pred             HHhhcC--CeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHH
Confidence            123332  5799998876654433322 44333321  122223333434 499999999998763221100    00  


Q ss_pred             eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          247 QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       247 ~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      .+............+|+|.++++++....  ..|+++.+.+|
T Consensus       243 ~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  284 (299)
T PRK06300        243 YYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG  284 (299)
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            00001111334679999999999887543  46788887665

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.00  E-value=5.8e-09  Score=88.88  Aligned_cols=143  Identities=10%  Similarity=0.106  Sum_probs=101.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHHhc-------CCcEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRSI  167 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~-------~~d~V  167 (294)
                      ..+-+||||||+.+||..+++++.+.|-+|++..|+++++.+...  +.+..+++|+.|.++.+++++       ..+++
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl   82 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL   82 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence            357899999999999999999999999999999999998877654  578889999999887665543       45999


Q ss_pred             EEcCC-----ch---------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHH
Q 022625          168 ICPSE-----GF---------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL  213 (294)
Q Consensus       168 i~~~~-----~~---------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~  213 (294)
                      |++++     .+                           +..-..+..-.-+|.+||--+..|....--|...|+  +.+
T Consensus        83 iNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsy  162 (245)
T COG3967          83 INNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSY  162 (245)
T ss_pred             eecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHHH
Confidence            98722     00                           111123333467999999766555433222322322  223


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecC
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNT  239 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~  239 (294)
                      .......++..+++++-+-|+.+...
T Consensus       163 t~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         163 TLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHhhhcceEEEEecCCceecC
Confidence            34455666777899999999988743

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.87  E-value=4.3e-08  Score=86.74  Aligned_cols=167  Identities=9%  Similarity=0.021  Sum_probs=101.5

Q ss_pred             HHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc----CCcEEEEcCCc-----h-----------
Q 022625          115 VILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPSEG-----F-----------  174 (294)
Q Consensus       115 l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~----~~d~Vi~~~~~-----~-----------  174 (294)
                      ++++|+++|++|++++|+.++..     ..+++++|++|.++++++++    ++|++||+++.     +           
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~~   75 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLGL   75 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHHH
Confidence            47889999999999999876642     24568899999999988876    47999998321     1           


Q ss_pred             --HHhhhhhc--CCCEEEEeccccccc---------------------------CCCCchhccchhHH--HHHHHHH-HH
Q 022625          175 --ISNAGSLK--GVQHVILLSQLSVYR---------------------------GSGGIQALMKGNAR--KLAEQDE-SM  220 (294)
Q Consensus       175 --~~~~~~~~--gv~r~V~vSs~~~~~---------------------------~~~~~~~~~~~~~~--~~~~~ae-~~  220 (294)
                        +.+.+...  +-.+||++||..++.                           +......|..+|..  .+.+... ..
T Consensus        76 ~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e  155 (241)
T PRK12428         76 RHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPW  155 (241)
T ss_pred             HHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHh
Confidence              22222211  226999999987753                           11222334333321  1111122 33


Q ss_pred             HHhCCCCEEEEEccceecCCCCCcc-----eeecc-CCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          221 LMASGIPYTIIRTGVLQNTPGGKQG-----FQFEE-GCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       221 l~~~gl~~tivRPg~l~~~~~~~~~-----~~~~~-g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      +...|+++++|+||.+.........     ..... ........+++|+|+++++++..+.  ..|+.+.+.+|
T Consensus       156 ~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg  229 (241)
T PRK12428        156 FGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGG  229 (241)
T ss_pred             hhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChhhcCccCcEEEecCc
Confidence            4557899999999987632211100     00000 0111224679999999999886543  45777777655

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.86  E-value=1.6e-08  Score=86.60  Aligned_cols=140  Identities=12%  Similarity=-0.025  Sum_probs=94.7

Q ss_pred             CCCeEEEEcC-CChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-CCCcEEeecCCCCHHHHHHHhcC--------CcEE
Q 022625           98 ARDAVLVTDG-DSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRG--------VRSI  167 (294)
Q Consensus        98 ~~~~vlVtGa-tG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~l~~~l~~--------~d~V  167 (294)
                      ..|.|+|||+ .|+||.++++.+.+.|+.|.+..|..++...+. ..++.....|+++++++.+....        .|++
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            3578888886 589999999999999999999999998876654 45799999999999888776542        3888


Q ss_pred             EEcCCch------------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHHHH
Q 022625          168 ICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE  215 (294)
Q Consensus       168 i~~~~~~------------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~  215 (294)
                      ++.++.-                              +.....+ .-..||++.|..++.+......|..+++  +...+
T Consensus        86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lik-aKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~  164 (289)
T KOG1209|consen   86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIK-AKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYAR  164 (289)
T ss_pred             EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHH-ccceEEEecceeEEeccchhhhhhHHHHHHHHhhh
Confidence            8762210                              0111112 2257999999988776554445533332  11111


Q ss_pred             HHHHHHHhCCCCEEEEEccceec
Q 022625          216 QDESMLMASGIPYTIIRTGVLQN  238 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~  238 (294)
                      -....|+-.|++++-+-+|.+..
T Consensus       165 tLrlEl~PFgv~Vin~itGGv~T  187 (289)
T KOG1209|consen  165 TLRLELKPFGVRVINAITGGVAT  187 (289)
T ss_pred             hcEEeeeccccEEEEecccceec
Confidence            11122233688888888887653

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.74  E-value=3.9e-07  Score=81.41  Aligned_cols=185  Identities=13%  Similarity=0.037  Sum_probs=116.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh----h------cCCCcEEeecCCCCHHHHHHHhcCC--cE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S------FGTYVESMAGDASNKKFLKTALRGV--RS  166 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~----~------~~~~v~~v~~D~~d~~~l~~~l~~~--d~  166 (294)
                      +|++||||-||.-|++|++.|+++|++|..+.|..+....    +      ....++.+.+|++|...+.++++.+  |-
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE   81 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE   81 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence            6899999999999999999999999999999987443111    1      1135888999999999999999866  88


Q ss_pred             EEEcCCc----------------------hHHhhhhhcCC--CEEEEeccccccc-----CCCCchhccchhHHHHHHHH
Q 022625          167 IICPSEG----------------------FISNAGSLKGV--QHVILLSQLSVYR-----GSGGIQALMKGNARKLAEQD  217 (294)
Q Consensus       167 Vi~~~~~----------------------~~~~~~~~~gv--~r~V~vSs~~~~~-----~~~~~~~~~~~~~~~~~~~a  217 (294)
                      |+|..+.                      .+.++.+..+.  -||...||.--+.     |.....++.+..++...+..
T Consensus        82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlY  161 (345)
T COG1089          82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY  161 (345)
T ss_pred             heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHH
Confidence            8886211                      15666666654  4777777754332     22222233333333322211


Q ss_pred             H-----HHHHhCCCCEEEEEccceecC--CCC--------------------CcceeeccCCCCCCCcCHHHHHHHHHHH
Q 022625          218 E-----SMLMASGIPYTIIRTGVLQNT--PGG--------------------KQGFQFEEGCAANGSLSKEDAAFICVEA  270 (294)
Q Consensus       218 e-----~~l~~~gl~~tivRPg~l~~~--~~~--------------------~~~~~~~~g~~~~~~Is~eDvA~~iv~a  270 (294)
                      .     .|-.+.|+-.   +.|.+++.  |..                    .....++.=+....|=+..|-.+++..+
T Consensus       162 a~W~tvNYResYgl~A---cnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlm  238 (345)
T COG1089         162 AYWITVNYRESYGLFA---CNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLM  238 (345)
T ss_pred             HHheeeehHhhcCcee---ecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHH
Confidence            1     1212244422   23444432  221                    1112222224567788999999999998


Q ss_pred             hhCCCCCCcEEEEecCCc
Q 022625          271 LESIPQTGLIFEVCEISN  288 (294)
Q Consensus       271 L~~~~~~g~~~~v~~g~~  288 (294)
                      |.++.  ...|.+..|++
T Consensus       239 LQq~~--PddyViATg~t  254 (345)
T COG1089         239 LQQEE--PDDYVIATGET  254 (345)
T ss_pred             HccCC--CCceEEecCce
Confidence            87754  57888888753

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.68  E-value=5.4e-07  Score=101.78  Aligned_cols=141  Identities=15%  Similarity=0.169  Sum_probs=94.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCccc----------------------------------------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRN----------------------------------------  135 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~~----------------------------------------  135 (294)
                      ..++++|||||+++||.+++++|+++ |++|+++.|++..                                        
T Consensus      1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813      1995 NSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence            35789999999999999999999998 6999999998200                                        


Q ss_pred             -----------hh--hhcCCCcEEeecCCCCHHHHHHHhc------CCcEEEEcCCc-------------h---------
Q 022625          136 -----------AM--ESFGTYVESMAGDASNKKFLKTALR------GVRSIICPSEG-------------F---------  174 (294)
Q Consensus       136 -----------~~--~~~~~~v~~v~~D~~d~~~l~~~l~------~~d~Vi~~~~~-------------~---------  174 (294)
                                 +.  ...+..+.++.+|++|.+.++++++      .+|.|||+++-             |         
T Consensus      2075 ~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813      2075 PVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred             ccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence                       00  0012357788999999988877764      46999997321             0         


Q ss_pred             ----HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHH-hCCCCEEEEEccceec
Q 022625          175 ----ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLM-ASGIPYTIIRTGVLQN  238 (294)
Q Consensus       175 ----~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~-~~gl~~tivRPg~l~~  238 (294)
                          +..++.....++||++||..+..+..+...|...+..- ...+..+-. ..+++++.|.||....
T Consensus      2155 G~~~Ll~al~~~~~~~IV~~SSvag~~G~~gqs~YaaAkaaL-~~la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813      2155 GLLSLLAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDIL-NKAALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred             HHHHHHHHHHHhCCCeEEEEechhhcCCCCCcHHHHHHHHHH-HHHHHHHHHHcCCcEEEEEECCeecC
Confidence                22234444567899999988765544555554433211 111222112 2468899999998753

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.61  E-value=2.1e-07  Score=87.60  Aligned_cols=86  Identities=20%  Similarity=0.227  Sum_probs=74.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchhhhcC---CCcEEeecCCCCHHHHHHHhcCCcEEEEcCCch
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFG---TYVESMAGDASNKKFLKTALRGVRSIICPSEGF  174 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~---~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~  174 (294)
                      +++|+|.|| |+||+.++..|+++| .+|++.+|+.++..+...   .+++.++.|+.|.+.+.+++++.|+||++.+++
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~   79 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF   79 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence            589999999 999999999999999 899999999887665533   479999999999999999999999999996654


Q ss_pred             ----HHhhhhhcCCC
Q 022625          175 ----ISNAGSLKGVQ  185 (294)
Q Consensus       175 ----~~~~~~~~gv~  185 (294)
                          +.++|.+.|+.
T Consensus        80 ~~~~i~ka~i~~gv~   94 (389)
T COG1748          80 VDLTILKACIKTGVD   94 (389)
T ss_pred             hhHHHHHHHHHhCCC
Confidence                56677777763

>PRK06720 hypothetical protein; Provisional

Probab=98.56  E-value=3.3e-07  Score=77.19  Aligned_cols=78  Identities=14%  Similarity=0.151  Sum_probs=61.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHh-------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------  161 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l-------  161 (294)
                      ..+.+++++||||+++||..++++|+++|++|+++.|+.+...+.      .+....++.+|+++.+++.+++       
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            345789999999999999999999999999999999987643221      1335677899999998877654       


Q ss_pred             cCCcEEEEcCC
Q 022625          162 RGVRSIICPSE  172 (294)
Q Consensus       162 ~~~d~Vi~~~~  172 (294)
                      ..+|++||+.+
T Consensus        92 G~iDilVnnAG  102 (169)
T PRK06720         92 SRIDMLFQNAG  102 (169)
T ss_pred             CCCCEEEECCC
Confidence            24699998743

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.42  E-value=8.6e-07  Score=76.05  Aligned_cols=76  Identities=16%  Similarity=0.179  Sum_probs=62.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-----CCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ...+++++|+||+|++|+.+++.|++.|++|+++.|+.+++.....     .+..+...|..+.+.+.+.++++|+||++
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a  104 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA  104 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence            3457899999999999999999999999999999999876543211     13456677888999999999999999998


Q ss_pred             C
Q 022625          171 S  171 (294)
Q Consensus       171 ~  171 (294)
                      +
T Consensus       105 t  105 (194)
T cd01078         105 G  105 (194)
T ss_pred             C
Confidence            3

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.37  E-value=1.9e-06  Score=81.67  Aligned_cols=88  Identities=23%  Similarity=0.286  Sum_probs=69.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC-C-eEEEEEcCccchhhhc----CCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCch-
Q 022625          102 VLVTDGDSDIGQMVILSLIVKR-T-RIKALVKDKRNAMESF----GTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-  174 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g-~-~V~~~~R~~~~~~~~~----~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-  174 (294)
                      |+|.|| |++|+.+++.|++++ + +|++..|+.+++.+..    ...+++++.|+.|.+++.++++++|+||++.+.+ 
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~   79 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF   79 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence            799999 999999999999987 4 8999999999866653    3589999999999999999999999999996554 


Q ss_pred             ---HHhhhhhcCCCEEEEec
Q 022625          175 ---ISNAGSLKGVQHVILLS  191 (294)
Q Consensus       175 ---~~~~~~~~gv~r~V~vS  191 (294)
                         ++++|.+.|+ ++|-+|
T Consensus        80 ~~~v~~~~i~~g~-~yvD~~   98 (386)
T PF03435_consen   80 GEPVARACIEAGV-HYVDTS   98 (386)
T ss_dssp             HHHHHHHHHHHT--EEEESS
T ss_pred             hHHHHHHHHHhCC-Ceeccc
Confidence               6677888886 566644

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.26  E-value=6e-06  Score=74.03  Aligned_cols=89  Identities=16%  Similarity=0.152  Sum_probs=66.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEcCCch---
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEGF---  174 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~~~---  174 (294)
                      |+|+|+||||. |+.++++|.++|++|++.+++..........+...+..+..|.+++.+.++  ++|+||+++..|   
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~   79 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPFAAQ   79 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHHHHH
Confidence            68999999998 999999999999999999999875443333333445566678888988886  479999985544   


Q ss_pred             ----HHhhhhhcCCCEEEE
Q 022625          175 ----ISNAGSLKGVQHVIL  189 (294)
Q Consensus       175 ----~~~~~~~~gv~r~V~  189 (294)
                          ..++|++.|+..+=|
T Consensus        80 is~~a~~a~~~~~ipylR~   98 (256)
T TIGR00715        80 ITTNATAVCKELGIPYVRF   98 (256)
T ss_pred             HHHHHHHHHHHhCCcEEEE
Confidence                444566666654444

This enzyme was found to be a monomer by gel filtration.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.22  E-value=7.8e-06  Score=71.99  Aligned_cols=90  Identities=16%  Similarity=0.240  Sum_probs=73.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHH-hcCCcEEEEcCCch--
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF--  174 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~~~--  174 (294)
                      |+++|.|+ |.+|+.+++.|.+.|++|+++.+++++..+...  ...+.+.+|-+|++.++++ ++.+|+++.+++..  
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~~   79 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDEV   79 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCHH
Confidence            68999998 999999999999999999999999998776444  4688999999999999988 88999999985432  


Q ss_pred             ---HHhhhhh-cCCCEEEEe
Q 022625          175 ---ISNAGSL-KGVQHVILL  190 (294)
Q Consensus       175 ---~~~~~~~-~gv~r~V~v  190 (294)
                         +..++.+ .|+++++--
T Consensus        80 N~i~~~la~~~~gv~~viar   99 (225)
T COG0569          80 NSVLALLALKEFGVPRVIAR   99 (225)
T ss_pred             HHHHHHHHHHhcCCCcEEEE
Confidence               3333433 688877654

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.19  E-value=6.1e-06  Score=72.71  Aligned_cols=73  Identities=18%  Similarity=0.160  Sum_probs=57.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-----CeEEEEEcCccchhhh-------cC---CCcEEeecCCCCHHHHHHHh-
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKR-----TRIKALVKDKRNAMES-------FG---TYVESMAGDASNKKFLKTAL-  161 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g-----~~V~~~~R~~~~~~~~-------~~---~~v~~v~~D~~d~~~l~~~l-  161 (294)
                      .+|.++|||++.++|-.+|.+|++..     ..+++.+|+.+++++.       ++   -.++.+..|+++..++.++. 
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            46889999999999999999999864     3577789999886553       23   26788999999987776554 


Q ss_pred             ------cCCcEEEEc
Q 022625          162 ------RGVRSIICP  170 (294)
Q Consensus       162 ------~~~d~Vi~~  170 (294)
                            +..|.|+..
T Consensus        82 di~~rf~~ld~iylN   96 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLN   96 (341)
T ss_pred             HHHHHhhhccEEEEc
Confidence                  455998876

>PRK09620 hypothetical protein; Provisional

Probab=98.10  E-value=9.8e-06  Score=71.55  Aligned_cols=174  Identities=14%  Similarity=0.156  Sum_probs=93.3

Q ss_pred             CCCeEEEEcCC----------------ChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCC--CcEEeecCCCCHHHHHH
Q 022625           98 ARDAVLVTDGD----------------SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--YVESMAGDASNKKFLKT  159 (294)
Q Consensus        98 ~~~~vlVtGat----------------G~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~--~v~~v~~D~~d~~~l~~  159 (294)
                      .+|+|+||+|.                |++|++++++|+++|++|+++.+.........+.  .+..+..+....+.+.+
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~   81 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS   81 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence            58999999886                9999999999999999999987643211111111  23345553333467778


Q ss_pred             Hhc--CCcEEEEcCC--chHHh-hhhh--------cCCC-----EEEEeccccc------ccCCCCchhccc--hh-HHH
Q 022625          160 ALR--GVRSIICPSE--GFISN-AGSL--------KGVQ-----HVILLSQLSV------YRGSGGIQALMK--GN-ARK  212 (294)
Q Consensus       160 ~l~--~~d~Vi~~~~--~~~~~-~~~~--------~gv~-----r~V~vSs~~~------~~~~~~~~~~~~--~~-~~~  212 (294)
                      .++  ++|+|||+++  .|..+ .+..        .+++     .+-+.-+...      ..+....-.+..  .. ...
T Consensus        82 ~~~~~~~D~VIH~AAvsD~~~~~~~~~~~~~~~~~~Ki~~~~~~~l~L~~~pdIl~~l~~~~~~~~~vGFkaEt~~~~~~  161 (229)
T PRK09620         82 IITHEKVDAVIMAAAGSDWVVDKICDQEGNVLDMNGKISSDIAPIIHFQKAPKVLKQIKQWDPETVLVGFKLESDVNEEE  161 (229)
T ss_pred             HhcccCCCEEEECccccceecccccccccccccccCCCcCCCCCeEEEEECcHHHHHHHhhCCCCEEEEEEeccCCCHHH
Confidence            784  6899999832  22111 1100        0111     1111111111      111110000100  00 012


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccc-eecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          213 LAEQDESMLMASGIPYTIIRTGV-LQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~-l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                      ..+.++.-|...++++++...-. .++.. . ....+..........+..++|.-++..+..
T Consensus       162 l~~~A~~kl~~k~~D~ivaN~~~~~~g~~-~-~~~ii~~~~~~~~~~~K~~iA~~i~~~i~~  221 (229)
T PRK09620        162 LFERAKNRMEEAKASVMIANSPHSLYSRG-A-MHYVIGQDGKGQLCNGKDETAKEIVKRLEV  221 (229)
T ss_pred             HHHHHHHHHHHcCCCEEEECCcccccCCC-c-EEEEEeCCCccccCCCHHHHHHHHHHHHHH
Confidence            33456666778899998876531 12111 2 233333333234556889999999987754

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.07  E-value=2e-05  Score=72.97  Aligned_cols=100  Identities=14%  Similarity=0.080  Sum_probs=69.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccchh--hhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~~--~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..++++|+|+||+|.||+.++..|+.++  .++++++++..+..  ++......+...+.+|+..+.+.++++|+||++.
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVita   84 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICA   84 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECC
Confidence            4467899999999999999999998655  68999988432221  1111011233445666555678999999999982


Q ss_pred             C-----c--h-------------HHhhhhhcCCCEEEEeccccc
Q 022625          172 E-----G--F-------------ISNAGSLKGVQHVILLSQLSV  195 (294)
Q Consensus       172 ~-----~--~-------------~~~~~~~~gv~r~V~vSs~~~  195 (294)
                      +     +  .             +.+.+++++++++|+++|..+
T Consensus        85 G~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPv  128 (321)
T PTZ00325         85 GVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPV  128 (321)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence            1     1  0             344678889999999999754

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.05  E-value=0.00023  Score=62.32  Aligned_cols=195  Identities=13%  Similarity=0.090  Sum_probs=119.9

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEc--CccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEE
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVK--DKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSII  168 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R--~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi  168 (294)
                      .......+|||||+=|.+|..++..|..+ |-+-++++.  .+...-  +. .=-++-.|+.|...+++.+-  .+|.+|
T Consensus        39 s~~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V--~~-~GPyIy~DILD~K~L~eIVVn~RIdWL~  115 (366)
T KOG2774|consen   39 SQTQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV--TD-VGPYIYLDILDQKSLEEIVVNKRIDWLV  115 (366)
T ss_pred             cccCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh--cc-cCCchhhhhhccccHHHhhcccccceee
Confidence            34556789999999999999999988754 654444432  222111  11 11245568888888877663  468888


Q ss_pred             EcC-------C------------c--hHHhhhhhcCCCEEEEecccccccCCCCchh------------ccchhHHHHHH
Q 022625          169 CPS-------E------------G--FISNAGSLKGVQHVILLSQLSVYRGSGGIQA------------LMKGNARKLAE  215 (294)
Q Consensus       169 ~~~-------~------------~--~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~------------~~~~~~~~~~~  215 (294)
                      |..       +            |  .+.+.+++++.+ +..-|+.++.+|..+.++            |.-++.+ ...
T Consensus       116 HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~-iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVH-AEL  193 (366)
T KOG2774|consen  116 HFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLK-VFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVH-AEL  193 (366)
T ss_pred             eHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCee-EeecccccccCCCCCCCCCCCeeeecCceeechhHHH-HHH
Confidence            851       1            1  156677777764 545688888776544332            2112221 111


Q ss_pred             HHHHHHHhCCCCEEEEEcccee-c-CCCCCc----------------ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--
Q 022625          216 QDESMLMASGIPYTIIRTGVLQ-N-TPGGKQ----------------GFQFEEGCAANGSLSKEDAAFICVEALESIP--  275 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~-~-~~~~~~----------------~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--  275 (294)
                      ..|.+--..|+++-.+|...+. . .|+++.                ...+...+....+.+.+|+-+++++.+..++  
T Consensus       194 ~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~  273 (366)
T KOG2774|consen  194 LGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQS  273 (366)
T ss_pred             HHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHH
Confidence            2333333468999999976644 2 233211                1112233445677889999999999998765  


Q ss_pred             CCCcEEEEecCCcccccc
Q 022625          276 QTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       276 ~~g~~~~v~~g~~~~~ei  293 (294)
                      ...++||+++-.-+++||
T Consensus       274 lkrr~ynvt~~sftpee~  291 (366)
T KOG2774|consen  274 LKRRTYNVTGFSFTPEEI  291 (366)
T ss_pred             hhhheeeeceeccCHHHH
Confidence            467999999877777765

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=98.01  E-value=6.6e-06  Score=71.42  Aligned_cols=167  Identities=15%  Similarity=0.104  Sum_probs=98.3

Q ss_pred             CCCeEEEEcCCChHHHHHHH-----HHHHCC----CeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVIL-----SLIVKR----TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSII  168 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~-----~L~~~g----~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi  168 (294)
                      +++..++-+.+|+|++.|..     ++-+.+    |.|++++|.+.+....+++      .|..-..      -.|++++
T Consensus        11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ritw~e------l~~~Gip------~sc~a~v   78 (315)
T KOG3019|consen   11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARITWPE------LDFPGIP------ISCVAGV   78 (315)
T ss_pred             ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcccccch------hcCCCCc------eehHHHH
Confidence            34566778899999988876     443333    9999999999876644431      1111000      0111222


Q ss_pred             Ec------------CCc--------------hHHhhhhhc--CCCEEEEecccccccCCCCc----------hhccchhH
Q 022625          169 CP------------SEG--------------FISNAGSLK--GVQHVILLSQLSVYRGSGGI----------QALMKGNA  210 (294)
Q Consensus       169 ~~------------~~~--------------~~~~~~~~~--gv~r~V~vSs~~~~~~~~~~----------~~~~~~~~  210 (294)
                      ++            +++              .++++...+  -.+.+|++|..++|.++..-          ..++..-.
T Consensus        79 na~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~~srL~  158 (315)
T KOG3019|consen   79 NAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDILSRLC  158 (315)
T ss_pred             hhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHHHHHHH
Confidence            11            111              255555544  24679999988887653211          11111111


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEEccceecCCCC-----------CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCC
Q 022625          211 RKLAEQDESMLMASGIPYTIIRTGVLQNTPGG-----------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTG  278 (294)
Q Consensus       211 ~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~-----------~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g  278 (294)
                      ..|..  .........+.++||.|.+.+..+.           +.+-.++.|.+..+|||++|++..+.++|+++...|
T Consensus       159 l~WE~--aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~G  235 (315)
T KOG3019|consen  159 LEWEG--AALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSVKG  235 (315)
T ss_pred             HHHHH--HhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCCCc
Confidence            11211  1112235689999999998743331           112234567888999999999999999999987765

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.98  E-value=1.8e-05  Score=73.69  Aligned_cols=70  Identities=20%  Similarity=0.203  Sum_probs=53.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHC-C-CeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVK-R-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~-g-~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ...+++|+||||+|+||+.++++|+.+ | .+++++.|+.+++.....   ++..+++.   .+.+++.++|+|||++
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~---el~~~~i~---~l~~~l~~aDiVv~~t  223 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA---ELGGGKIL---SLEEALPEADIVVWVA  223 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH---HhccccHH---hHHHHHccCCEEEECC
Confidence            568899999999999999999999864 5 589999998776654322   11123443   4668899999999983

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.98  E-value=7.5e-05  Score=58.24  Aligned_cols=70  Identities=19%  Similarity=0.254  Sum_probs=58.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH-hcCCcEEEEcCC
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE  172 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~  172 (294)
                      |+|.|. |.+|+.+++.|.+.+.+|+++.++++........++.++.+|.+|++.++++ +++++.++.+++
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccC
Confidence            688997 7899999999999877999999999887766666799999999999998874 678899998854

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=97.96  E-value=3e-05  Score=68.44  Aligned_cols=167  Identities=8%  Similarity=0.107  Sum_probs=89.4

Q ss_pred             EEE-cCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCC--HHHHHHHhcCCcEEEEcCC--ch--H
Q 022625          103 LVT-DGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICPSE--GF--I  175 (294)
Q Consensus       103 lVt-GatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d--~~~l~~~l~~~d~Vi~~~~--~~--~  175 (294)
                      .|| .+||++|++++++|+++|++|+++.|...... ....+++++..+..+  .+.+.+.+.++|+|||+++  .+  .
T Consensus        19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd~~~~   97 (229)
T PRK06732         19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSDYTPV   97 (229)
T ss_pred             eecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCCceeh
Confidence            344 56889999999999999999999987643211 112356666654322  2456667788999999832  11  0


Q ss_pred             H--------------hhhh----hcCCCE------EEEeccccc------ccCCCCchhccch---hHHHHHHHHHHHHH
Q 022625          176 S--------------NAGS----LKGVQH------VILLSQLSV------YRGSGGIQALMKG---NARKLAEQDESMLM  222 (294)
Q Consensus       176 ~--------------~~~~----~~gv~r------~V~vSs~~~------~~~~~~~~~~~~~---~~~~~~~~ae~~l~  222 (294)
                      .              +.++    ..++++      +-+..+...      ..+....-.+...   ......+.+..-|.
T Consensus        98 ~~~~~~~~~~~~~v~~~~~~~~~~~Ki~~~~~~~~l~l~~~p~il~~~~~~~~~~~~vgF~~e~~~~~~~l~~~a~~kl~  177 (229)
T PRK06732         98 YMTDLEEVSASDNLNEFLTKQNTEAKISSASDYQVLFLKKTPKVISYVKKWNPNITLVGFKLLVNVSKEELIKVARASLI  177 (229)
T ss_pred             hhhhhhhhhhhhhhhhhhccccccCCccCCCCceEEEEEEChHHHHHHHhhCCCcEEEEEEeccCCCHHHHHHHHHHHHH
Confidence            0              0110    111111      111111111      0111111111110   11223456667777


Q ss_pred             hCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhh
Q 022625          223 ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       223 ~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                      ..+.++++...-..+ +........+..+.. ....+.+++|..++..+.
T Consensus       178 ~~~~d~vvaN~~~~~-~~~~~~~~~i~~~~~-~~~~~K~~~a~~i~~~~~  225 (229)
T PRK06732        178 KNQADYILANDLTDI-SADQHKALLVSKNEV-YTAQTKEEIADLLLERIE  225 (229)
T ss_pred             HcCCCEEEEeccccc-CCCCcEEEEEeCCCe-eeCCCHHHHHHHHHHHHH
Confidence            889999887764323 222333344433322 345788999999998764

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.95  E-value=2.9e-05  Score=70.94  Aligned_cols=73  Identities=8%  Similarity=0.074  Sum_probs=58.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCc---cchhhh---cC---CCcEEeecCCCCHHHHHHHhcCCcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---RNAMES---FG---TYVESMAGDASNKKFLKTALRGVRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~-V~~~~R~~---~~~~~~---~~---~~v~~v~~D~~d~~~l~~~l~~~d~  166 (294)
                      ..+++++|+|| |++|+.++..|+..|++ |.++.|+.   +++.+.   +.   ..+.+...|+.+.+.+.+.++.+|+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di  202 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI  202 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence            46789999999 89999999999999986 99999986   443332   11   2345566889888888888889999


Q ss_pred             EEEc
Q 022625          167 IICP  170 (294)
Q Consensus       167 Vi~~  170 (294)
                      ||++
T Consensus       203 lINa  206 (289)
T PRK12548        203 LVNA  206 (289)
T ss_pred             EEEe
Confidence            9998

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.95  E-value=2.1e-05  Score=72.44  Aligned_cols=73  Identities=12%  Similarity=0.193  Sum_probs=61.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHH----CCCeEEEEEcCccchhhhc-------C---CCcEEeecCCCCHHHHHHHhcCCc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNAMESF-------G---TYVESMAGDASNKKFLKTALRGVR  165 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~----~g~~V~~~~R~~~~~~~~~-------~---~~v~~v~~D~~d~~~l~~~l~~~d  165 (294)
                      --++|.||+||.|..++.+++.    .+..+-+..|+++++.+..       +   ....++.+|..|++++.+..+.+.
T Consensus         6 yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~   85 (423)
T KOG2733|consen    6 YDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQAR   85 (423)
T ss_pred             eeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhE
Confidence            3589999999999999999998    6788888999998865532       1   123388899999999999999999


Q ss_pred             EEEEcCC
Q 022625          166 SIICPSE  172 (294)
Q Consensus       166 ~Vi~~~~  172 (294)
                      +|+|+.+
T Consensus        86 vivN~vG   92 (423)
T KOG2733|consen   86 VIVNCVG   92 (423)
T ss_pred             EEEeccc
Confidence            9999843

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.93  E-value=3.9e-05  Score=72.26  Aligned_cols=72  Identities=18%  Similarity=0.240  Sum_probs=54.6

Q ss_pred             CCCeEEEEcCCChHHHH--HHHHHHHCCCeEEEEEcCccc---------------hhhh---cCCCcEEeecCCCCHHHH
Q 022625           98 ARDAVLVTDGDSDIGQM--VILSLIVKRTRIKALVKDKRN---------------AMES---FGTYVESMAGDASNKKFL  157 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~--l~~~L~~~g~~V~~~~R~~~~---------------~~~~---~~~~v~~v~~D~~d~~~l  157 (294)
                      .+|++||||+++++|.+  +++.| ..|++|+++.+..++               ..+.   .+..+..+.+|+++.+.+
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            47999999999999999  89999 999999988853211               1111   123456789999998777


Q ss_pred             HHHhc-------CCcEEEEc
Q 022625          158 KTALR-------GVRSIICP  170 (294)
Q Consensus       158 ~~~l~-------~~d~Vi~~  170 (294)
                      .++++       .+|++||+
T Consensus       119 ~~lie~I~e~~G~IDiLVnS  138 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYS  138 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEEC
Confidence            66553       56999997

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.90  E-value=0.00013  Score=60.97  Aligned_cols=188  Identities=16%  Similarity=0.180  Sum_probs=115.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh---hcCCCcEEeecCCCCHHHHHHHhcC-------CcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRG-------VRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~v~~v~~D~~d~~~l~~~l~~-------~d~  166 (294)
                      .++-..+|||+..++|+..+..|+.+|..|++++-..++..+   ..+.++.+...|+++++.+..++..       .|+
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            456788999999999999999999999999999887665333   3456789999999999888877753       499


Q ss_pred             EEEcCCc---h------------HHh---------------------hhh----hcCCC--EEEEecccccccCCCCchh
Q 022625          167 IICPSEG---F------------ISN---------------------AGS----LKGVQ--HVILLSQLSVYRGSGGIQA  204 (294)
Q Consensus       167 Vi~~~~~---~------------~~~---------------------~~~----~~gv~--r~V~vSs~~~~~~~~~~~~  204 (294)
                      .++|.+-   +            +.+                     .+-    ..+-+  -+|.+.|..+...+-+..+
T Consensus        87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaa  166 (260)
T KOG1199|consen   87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAA  166 (260)
T ss_pred             eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhh
Confidence            9988321   0            111                     010    11112  2455555555555544445


Q ss_pred             ccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCC----Ccceee-ccCC-CCCCCcCHHHHHHHHHHHhhCCCC
Q 022625          205 LMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGFQF-EEGC-AANGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       205 ~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~----~~~~~~-~~g~-~~~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      |..++..  .+..-...-+...||++..|-||.+. .|--    .....| ..-. .+.-.=++.+-+..+-.++++|-.
T Consensus       167 ysaskgaivgmtlpiardla~~gir~~tiapglf~-tpllsslpekv~~fla~~ipfpsrlg~p~eyahlvqaiienp~l  245 (260)
T KOG1199|consen  167 YSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFD-TPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYAHLVQAIIENPYL  245 (260)
T ss_pred             hhcccCceEeeechhhhhcccCceEEEeecccccC-ChhhhhhhHHHHHHHHHhCCCchhcCChHHHHHHHHHHHhCccc
Confidence            5333321  01111122244578999999999765 3220    000000 0000 011122567778888778888888


Q ss_pred             CCcEEEEec
Q 022625          277 TGLIFEVCE  285 (294)
Q Consensus       277 ~g~~~~v~~  285 (294)
                      +|++..+.+
T Consensus       246 ngevir~dg  254 (260)
T KOG1199|consen  246 NGEVIRFDG  254 (260)
T ss_pred             CCeEEEecc
Confidence            888888754

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=97.87  E-value=0.0004  Score=60.63  Aligned_cols=186  Identities=14%  Similarity=0.133  Sum_probs=112.0

Q ss_pred             cCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEEcCccchhh----hcCC--CcEEeecCCCCHHHHHHHhc-----
Q 022625           96 EEARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKRNAME----SFGT--YVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        96 ~~~~~~vlVtGa--tG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~~~--~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      .+.||++||+|-  +-.|+-.++++|.++|.++.....++ ++..    +.++  ...+++||+++.+++.+.++     
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            357999999996  45799999999999999998877766 2221    1111  24578999999988887775     


Q ss_pred             --CCcEEEEc---CC-----c---------h----------HHhhhhhc-----CCCEEEEecccc---cccCCCCchhc
Q 022625          163 --GVRSIICP---SE-----G---------F----------ISNAGSLK-----GVQHVILLSQLS---VYRGSGGIQAL  205 (294)
Q Consensus       163 --~~d~Vi~~---~~-----~---------~----------~~~~~~~~-----gv~r~V~vSs~~---~~~~~~~~~~~  205 (294)
                        ..|.++|+   ++     |         |          +..+++..     .-..+|-++-.+   +.+..++|+. 
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNvMGv-  160 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGV-  160 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCchhHH-
Confidence              45999997   11     1         1          11111111     113454444333   3333333322 


Q ss_pred             cchhHHHHHHHHHHHHHh----CCCCEEEEEccceec--CCC--CCcce-ee-ccCCCCCCCcCHHHHHHHHHHHhhC--
Q 022625          206 MKGNARKLAEQDESMLMA----SGIPYTIIRTGVLQN--TPG--GKQGF-QF-EEGCAANGSLSKEDAAFICVEALES--  273 (294)
Q Consensus       206 ~~~~~~~~~~~ae~~l~~----~gl~~tivRPg~l~~--~~~--~~~~~-~~-~~g~~~~~~Is~eDvA~~iv~aL~~--  273 (294)
                          ++...+..-+||..    .|++++.|..|.+-.  ..+  +...+ .+ .........++.|||+...++++.+  
T Consensus       161 ----AKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLs  236 (259)
T COG0623         161 ----AKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLS  236 (259)
T ss_pred             ----HHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchh
Confidence                22222333344432    689999998887542  111  11101 11 1122334567899999999998875  


Q ss_pred             CCCCCcEEEEecCC
Q 022625          274 IPQTGLIFEVCEIS  287 (294)
Q Consensus       274 ~~~~g~~~~v~~g~  287 (294)
                      ++..|++.+|.+|-
T Consensus       237 sgiTGei~yVD~G~  250 (259)
T COG0623         237 SGITGEIIYVDSGY  250 (259)
T ss_pred             cccccceEEEcCCc
Confidence            45678999888774

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.85  E-value=8.7e-05  Score=71.64  Aligned_cols=90  Identities=12%  Similarity=0.175  Sum_probs=70.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHH-hcCCcEEEEcCCch---
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF---  174 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~~~---  174 (294)
                      |+|+|.|+ |.+|+.+++.|.++|++|+++.+++++...... .+++++.+|.++...++++ ++++|+||.+.+..   
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~~~n   79 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSDETN   79 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCChHHH
Confidence            57999998 999999999999999999999999887665443 4688999999999999888 88999999884332   


Q ss_pred             --HHhhhhhc-CCCEEEEe
Q 022625          175 --ISNAGSLK-GVQHVILL  190 (294)
Q Consensus       175 --~~~~~~~~-gv~r~V~v  190 (294)
                        +...++.. +..++|..
T Consensus        80 ~~~~~~~r~~~~~~~ii~~   98 (453)
T PRK09496         80 MVACQIAKSLFGAPTTIAR   98 (453)
T ss_pred             HHHHHHHHHhcCCCeEEEE
Confidence              23334443 55555443

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.78  E-value=0.00015  Score=67.62  Aligned_cols=89  Identities=17%  Similarity=0.127  Sum_probs=57.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCch-
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-  174 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-  174 (294)
                      +++|+|.||||++|+++++.|.+++|   ++.++.++.+......-.+.+....|+.+.     .++++|+||.+.+.. 
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~-----~~~~vDvVf~A~g~g~   75 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTF-----DFSGVDIALFSAGGSV   75 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHH-----HHcCCCEEEECCChHH
Confidence            47899999999999999999999876   457777765433222111234445566532     346899999985533 


Q ss_pred             ---HHhhhhhcCCCEEEEeccc
Q 022625          175 ---ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       175 ---~~~~~~~~gv~r~V~vSs~  193 (294)
                         +.....+.|+ .+|=.|+.
T Consensus        76 s~~~~~~~~~~G~-~VIDlS~~   96 (334)
T PRK14874         76 SKKYAPKAAAAGA-VVIDNSSA   96 (334)
T ss_pred             HHHHHHHHHhCCC-EEEECCch
Confidence               2223344565 55555654

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.77  E-value=8.7e-05  Score=70.36  Aligned_cols=98  Identities=17%  Similarity=0.153  Sum_probs=63.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHH-HhcCCcEEEEcCCc-h
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT-ALRGVRSIICPSEG-F  174 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~-~l~~~d~Vi~~~~~-~  174 (294)
                      ..++|.|.||||++|+++++.|.++ .++|..+.++.+...............|+.+...++. .++++|+||.+.+. .
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~  116 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGT  116 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHH
Confidence            5679999999999999999999998 6799999886544322111112222344433333332 25889999998432 2


Q ss_pred             ---HHhhhhhcCCCEEEEeccccccc
Q 022625          175 ---ISNAGSLKGVQHVILLSQLSVYR  197 (294)
Q Consensus       175 ---~~~~~~~~gv~r~V~vSs~~~~~  197 (294)
                         +...+ +.| .++|-+|+..-..
T Consensus       117 s~~i~~~~-~~g-~~VIDlSs~fRl~  140 (381)
T PLN02968        117 TQEIIKAL-PKD-LKIVDLSADFRLR  140 (381)
T ss_pred             HHHHHHHH-hCC-CEEEEcCchhccC
Confidence               33333 344 6799999876544

>PLN00106 malate dehydrogenase

Probab=97.76  E-value=0.00012  Score=67.78  Aligned_cols=98  Identities=15%  Similarity=0.131  Sum_probs=67.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCccch--hhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC--
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNA--MESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~~~~--~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~--  172 (294)
                      .++|+|+||+|.||+.++..|+.++.  +++++++++.+.  .++..........++++.+++.+.++++|+||++.+  
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~   97 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVP   97 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCC
Confidence            47999999999999999999997764  899998877221  111111111223344444457789999999999822  


Q ss_pred             ---ch---------------HHhhhhhcCCCEEEEecccccc
Q 022625          173 ---GF---------------ISNAGSLKGVQHVILLSQLSVY  196 (294)
Q Consensus       173 ---~~---------------~~~~~~~~gv~r~V~vSs~~~~  196 (294)
                         +.               +.+.+.+++++.+|+++|.-++
T Consensus        98 ~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD  139 (323)
T PLN00106         98 RKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVN  139 (323)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence               11               3445677889999999986554

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.74  E-value=6e-05  Score=70.00  Aligned_cols=70  Identities=16%  Similarity=0.068  Sum_probs=49.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-------CeEEEEEcCccchhhhcCCCcE------EeecCCCCHHHHHHHhcCCcE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR-------TRIKALVKDKRNAMESFGTYVE------SMAGDASNKKFLKTALRGVRS  166 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~~~v~------~v~~D~~d~~~l~~~l~~~d~  166 (294)
                      .+|+||||+|++|+.++..|+..+       .+|+++++++... ...+..++      ....|+.....+.+.++++|+
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~-~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi   81 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK-ALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV   81 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc-cccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence            579999999999999999998844       5899999965320 01111111      122355445667788999999


Q ss_pred             EEEc
Q 022625          167 IICP  170 (294)
Q Consensus       167 Vi~~  170 (294)
                      |||+
T Consensus        82 VI~t   85 (325)
T cd01336          82 AILV   85 (325)
T ss_pred             EEEe
Confidence            9998

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.74  E-value=8.8e-05  Score=64.53  Aligned_cols=177  Identities=15%  Similarity=0.082  Sum_probs=102.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchh--h---hcCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--E---SFGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~--~---~~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      .++.+||||++.+||..++..+.+.+-+.+...++...+.  .   ..+.......+|++....+....+       .-|
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~   84 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRD   84 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCcee
Confidence            5678999999999999999999888765544433322221  0   111223334456655554444332       238


Q ss_pred             EEEEcCCc-------h--------------------------HHhhhhhcC-CCEEEEecccccccCCCCchhccchhHH
Q 022625          166 SIICPSEG-------F--------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       166 ~Vi~~~~~-------~--------------------------~~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      .+||+++.       +                          .....++.. .+-+|++||..+..|...+..|..+|+.
T Consensus        85 iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~KaA  164 (253)
T KOG1204|consen   85 IIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKAA  164 (253)
T ss_pred             EEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHHH
Confidence            99987221       0                          001112221 3679999999999988888888766542


Q ss_pred             HHHHHHHHHHHhC-CCCEEEEEccceecCCC----CCcc------eeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          212 KLAEQDESMLMAS-GIPYTIIRTGVLQNTPG----GKQG------FQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       212 ~~~~~ae~~l~~~-gl~~tivRPg~l~~~~~----~~~~------~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      ...-..-....++ ++.+..++||.+-....    ....      ..+..-......++..+-|..+..++++.
T Consensus       165 r~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  165 RNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKG  238 (253)
T ss_pred             HHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhc
Confidence            2111111112233 78899999998763221    0000      00111123355678889999999888775

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.69  E-value=6.6e-05  Score=60.74  Aligned_cols=71  Identities=17%  Similarity=0.200  Sum_probs=53.7

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCccchhhhcC----CCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMESFG----TYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~----~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      ....+++++|.|| |++|+.++.+|...|.+ |.++.|+.+++.++..    ..+.++  ++.+   +.+.+..+|+||+
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~--~~~~---~~~~~~~~DivI~   81 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAI--PLED---LEEALQEADIVIN   81 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEE--EGGG---HCHHHHTESEEEE
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCcccccee--eHHH---HHHHHhhCCeEEE
Confidence            3567899999997 99999999999999986 9999999988665422    123333  3333   4477889999999


Q ss_pred             cC
Q 022625          170 PS  171 (294)
Q Consensus       170 ~~  171 (294)
                      ++
T Consensus        82 aT   83 (135)
T PF01488_consen   82 AT   83 (135)
T ss_dssp             -S
T ss_pred             ec
Confidence            83

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.68  E-value=0.0012  Score=62.86  Aligned_cols=168  Identities=12%  Similarity=0.115  Sum_probs=92.6

Q ss_pred             CCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHH-HH
Q 022625           97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFL-KT  159 (294)
Q Consensus        97 ~~~~~vlVtGa----------------tG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l-~~  159 (294)
                      +.+++|+||||                ||.+|..++++|..+|++|+++.+.....   .+.++  ...|+++.+++ +.
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~~~~~--~~~~v~~~~~~~~~  257 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---TPPGV--KSIKVSTAEEMLEA  257 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---CCCCc--EEEEeccHHHHHHH
Confidence            56899999999                35699999999999999999988765431   22233  45788888777 44


Q ss_pred             Hh----cCCcEEEEcCC--chHHhhhhhcCCCE------EEEeccccc------ccCCCCchhccchhHHH-HHHHHHHH
Q 022625          160 AL----RGVRSIICPSE--GFISNAGSLKGVQH------VILLSQLSV------YRGSGGIQALMKGNARK-LAEQDESM  220 (294)
Q Consensus       160 ~l----~~~d~Vi~~~~--~~~~~~~~~~gv~r------~V~vSs~~~------~~~~~~~~~~~~~~~~~-~~~~ae~~  220 (294)
                      ++    ..+|++|++++  .+........++++      +=+..+-..      ..+....-.+... ... +.+.++.-
T Consensus       258 ~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~~~lvgF~aE-t~~~l~~~A~~k  336 (390)
T TIGR00521       258 ALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKHQVIVGFKAE-TNDDLIKYAKEK  336 (390)
T ss_pred             HHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCCcEEEEEEcC-CCcHHHHHHHHH
Confidence            44    35799999832  11100000111111      111111111      0011000000000 001 34566777


Q ss_pred             HHhCCCCEEEEEccce--ecCCCCCcceeecc-CCCCCCCcCHHHHHHHHHHHh
Q 022625          221 LMASGIPYTIIRTGVL--QNTPGGKQGFQFEE-GCAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       221 l~~~gl~~tivRPg~l--~~~~~~~~~~~~~~-g~~~~~~Is~eDvA~~iv~aL  271 (294)
                      ++..++++++...-..  ++.. ......+.. |.......+..++|+.+++.+
T Consensus       337 l~~k~~D~ivaN~i~~~~fg~~-~n~~~li~~~~~~~~~~~~K~~iA~~i~~~~  389 (390)
T TIGR00521       337 LKKKNLDMIVANDVSQRGFGSD-ENEVYIFSKHGHKELPLMSKLEVAERILDEI  389 (390)
T ss_pred             HHHcCCCEEEEccCCccccCCC-CcEEEEEECCCeEEeCCCCHHHHHHHHHHHh
Confidence            7889999998775321  2111 223333333 333455668899999998765

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.68  E-value=0.00017  Score=68.78  Aligned_cols=169  Identities=11%  Similarity=0.071  Sum_probs=95.5

Q ss_pred             CCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH
Q 022625           97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA  160 (294)
Q Consensus        97 ~~~~~vlVtGa----------------tG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~  160 (294)
                      +.+++|+||||                +|.+|.+++++|+.+|++|+++.++.+ ..  .+.+  +...|+++.+++.++
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--~~~~--~~~~dv~~~~~~~~~  260 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--TPAG--VKRIDVESAQEMLDA  260 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--CCCC--cEEEccCCHHHHHHH
Confidence            46899999999                888999999999999999999988763 21  1222  345689998777666


Q ss_pred             h----cCCcEEEEcCC--chHHhhhhhcCCCE------EEEeccccc------ccCCC-CchhccchhHHHHHHHHHHHH
Q 022625          161 L----RGVRSIICPSE--GFISNAGSLKGVQH------VILLSQLSV------YRGSG-GIQALMKGNARKLAEQDESML  221 (294)
Q Consensus       161 l----~~~d~Vi~~~~--~~~~~~~~~~gv~r------~V~vSs~~~------~~~~~-~~~~~~~~~~~~~~~~ae~~l  221 (294)
                      +    ..+|++|++++  .+........++++      +-+.-+...      ..+.. ..-.+... .....+.+..-+
T Consensus       261 v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~pdIl~~l~~~~~~~~~~VGFaaE-t~~~~~~A~~kl  339 (399)
T PRK05579        261 VLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNPDILAEVAALKDKRPFVVGFAAE-TGDVLEYARAKL  339 (399)
T ss_pred             HHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCcHHHHHHHhccCCCCEEEEEccC-CchHHHHHHHHH
Confidence            5    45799999832  11111111111111      111111111      00000 00011000 001234566667


Q ss_pred             HhCCCCEEEEEccceec-CCC--CCcceeecc-CC-CCCCCcCHHHHHHHHHHHhh
Q 022625          222 MASGIPYTIIRTGVLQN-TPG--GKQGFQFEE-GC-AANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       222 ~~~gl~~tivRPg~l~~-~~~--~~~~~~~~~-g~-~~~~~Is~eDvA~~iv~aL~  272 (294)
                      ...++++++...-. .+ +.+  ......+.. |. ......+.+++|+.++..+.
T Consensus       340 ~~k~~D~ivaN~i~-~~~~fg~~~n~~~ii~~~~~~~~~~~~~K~~iA~~i~~~i~  394 (399)
T PRK05579        340 KRKGLDLIVANDVS-AGGGFGSDDNEVTLIWSDGGEVKLPLMSKLELARRLLDEIA  394 (399)
T ss_pred             HHcCCeEEEEecCC-cCCCcCCCceEEEEEECCCcEEEcCCCCHHHHHHHHHHHHH
Confidence            78899999877632 11 111  223333332 32 23566788999999998764

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.66  E-value=0.00055  Score=72.12  Aligned_cols=96  Identities=15%  Similarity=0.078  Sum_probs=72.1

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCC-Ce-------------EEEEEcCccchhhhcC--CCcEEeecCCCCHHHH
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKR-TR-------------IKALVKDKRNAMESFG--TYVESMAGDASNKKFL  157 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g-~~-------------V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l  157 (294)
                      .....+++|+|.|| |+||+..++.|++.. ++             |.+.+++.+.+.....  ++++.++.|++|.+++
T Consensus       564 ~~~~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L  642 (1042)
T PLN02819        564 EVTKKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESL  642 (1042)
T ss_pred             cccccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHH
Confidence            34556889999997 999999999998753 33             6667777766554332  3578899999999999


Q ss_pred             HHHhcCCcEEEEcCCch----HHhhhhhcCCCEEEEec
Q 022625          158 KTALRGVRSIICPSEGF----ISNAGSLKGVQHVILLS  191 (294)
Q Consensus       158 ~~~l~~~d~Vi~~~~~~----~~~~~~~~gv~r~V~vS  191 (294)
                      .++++++|+||++.+..    ++.+|.+.|+ |++-.|
T Consensus       643 ~~~v~~~DaVIsalP~~~H~~VAkaAieaGk-Hvv~ek  679 (1042)
T PLN02819        643 LKYVSQVDVVISLLPASCHAVVAKACIELKK-HLVTAS  679 (1042)
T ss_pred             HHhhcCCCEEEECCCchhhHHHHHHHHHcCC-CEEECc
Confidence            99999999999995432    5556667774 565444

>PRK05086 malate dehydrogenase; Provisional

Probab=97.55  E-value=0.00048  Score=63.64  Aligned_cols=92  Identities=14%  Similarity=0.102  Sum_probs=59.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHH---CCCeEEEEEcCccch---hhhcC-CCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNA---MESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~---~g~~V~~~~R~~~~~---~~~~~-~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      |+|+|+||+|.||+.++..|..   .++++.+++|++...   .+... .....+.+  .+.+.+.+.++++|+||.+.+
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG   78 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG   78 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence            6899999999999999998854   346888888875321   11111 11112222  112344567789999999822


Q ss_pred             -----ch---------------HHhhhhhcCCCEEEEeccc
Q 022625          173 -----GF---------------ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       173 -----~~---------------~~~~~~~~gv~r~V~vSs~  193 (294)
                           +.               +.+.+.+.+.+++|.+.|-
T Consensus        79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsN  119 (312)
T PRK05086         79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITN  119 (312)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence                 10               3345677889999999874

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.52  E-value=0.00081  Score=62.83  Aligned_cols=94  Identities=16%  Similarity=0.219  Sum_probs=66.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCcc---------------------chh---h---hcCC--Cc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---------------------NAM---E---SFGT--YV  144 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~---------------------~~~---~---~~~~--~v  144 (294)
                      ..+..++|+|.|+ |++|+.+++.|++.|. ++++++++.-                     |+.   +   ...+  .+
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i   98 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI   98 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence            4556789999997 8899999999999998 7777877641                     110   0   0122  45


Q ss_pred             EEeecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEec
Q 022625          145 ESMAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLS  191 (294)
Q Consensus       145 ~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vS  191 (294)
                      +.+..|++ .+.+.++++++|+||.+.+.+     +.+++.+.+++ +|+.+
T Consensus        99 ~~~~~~~~-~~~~~~~~~~~DlVid~~D~~~~r~~in~~~~~~~ip-~i~~~  148 (338)
T PRK12475         99 VPVVTDVT-VEELEELVKEVDLIIDATDNFDTRLLINDLSQKYNIP-WIYGG  148 (338)
T ss_pred             EEEeccCC-HHHHHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEEE
Confidence            55667775 457788899999999996543     45667777765 44544

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.46  E-value=0.0012  Score=61.70  Aligned_cols=95  Identities=19%  Similarity=0.286  Sum_probs=66.7

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCcc---------------------chh---h---hcCC--Cc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---------------------NAM---E---SFGT--YV  144 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~---------------------~~~---~---~~~~--~v  144 (294)
                      ..+..++|+|.|+ |++|++++..|+..|. ++++++++.-                     |+.   +   ...+  .+
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v   98 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV   98 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence            4556789999998 8999999999999998 8888887631                     110   0   0122  34


Q ss_pred             EEeecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEecc
Q 022625          145 ESMAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       145 ~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vSs  192 (294)
                      +.+..+++ .+.+.++++++|+||.+.+.+     +.++|.+.++. +|+.+.
T Consensus        99 ~~~~~~~~-~~~~~~~~~~~DlVid~~Dn~~~r~~ln~~~~~~~iP-~i~~~~  149 (339)
T PRK07688         99 EAIVQDVT-AEELEELVTGVDLIIDATDNFETRFIVNDAAQKYGIP-WIYGAC  149 (339)
T ss_pred             EEEeccCC-HHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHhCCC-EEEEee
Confidence            55566765 456778899999999995543     55677777754 555543

>PRK04148 hypothetical protein; Provisional

Probab=97.46  E-value=0.00078  Score=54.33  Aligned_cols=88  Identities=10%  Similarity=0.035  Sum_probs=70.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC-----
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-----  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~-----  172 (294)
                      +++++++.|. | .|..++..|.+.|++|++++.++..........++++..|+.++.-  +..+++|.|+...+     
T Consensus        16 ~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~--~~y~~a~liysirpp~el~   91 (134)
T PRK04148         16 KNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL--EIYKNAKLIYSIRPPRDLQ   91 (134)
T ss_pred             cCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH--HHHhcCCEEEEeCCCHHHH
Confidence            3578999997 5 8999999999999999999999987665555578999999998763  66789999998832     


Q ss_pred             chHHhhhhhcCCCEEEE
Q 022625          173 GFISNAGSLKGVQHVIL  189 (294)
Q Consensus       173 ~~~~~~~~~~gv~r~V~  189 (294)
                      ..+.+.+++.++.-+|.
T Consensus        92 ~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         92 PFILELAKKINVPLIIK  108 (134)
T ss_pred             HHHHHHHHHcCCCEEEE
Confidence            23677888888765443

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.43  E-value=0.00096  Score=64.39  Aligned_cols=95  Identities=19%  Similarity=0.252  Sum_probs=72.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHH-HhcCCcEEEEcCCc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKT-ALRGVRSIICPSEG  173 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~-~l~~~d~Vi~~~~~  173 (294)
                      ...++++|.|+ |.+|+.+++.|.++|++|+++.+++++......  .++.++.+|.++.+.+++ .++++|+||.+.+.
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~  307 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTND  307 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCC
Confidence            34689999998 999999999999999999999999886554322  367889999999988865 45788999987432


Q ss_pred             h-----HHhhhhhcCCCEEEEecc
Q 022625          174 F-----ISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       174 ~-----~~~~~~~~gv~r~V~vSs  192 (294)
                      .     ....+++.++.+++....
T Consensus       308 ~~~n~~~~~~~~~~~~~~ii~~~~  331 (453)
T PRK09496        308 DEANILSSLLAKRLGAKKVIALVN  331 (453)
T ss_pred             cHHHHHHHHHHHHhCCCeEEEEEC
Confidence            1     223456677777766544

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.40  E-value=0.00047  Score=63.17  Aligned_cols=74  Identities=7%  Similarity=-0.075  Sum_probs=59.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ...++|-||+||.|..++++|+.+|.+-.+..|+..++..... -+.++-..++.+++.+++.+.++++|+++.+
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvG   80 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVG   80 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEeccc
Confidence            4678999999999999999999999998888999988664322 1233444455568999999999999999844

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.37  E-value=0.00045  Score=54.67  Aligned_cols=88  Identities=20%  Similarity=0.163  Sum_probs=53.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCcc-c---hhhhcC--CCcE-EeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-N---AMESFG--TYVE-SMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~-~---~~~~~~--~~v~-~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      +|.|.||||++|+++++.|.++- ++++.+..... .   ....++  .... ...-+ .+.+    .+.++|+||.+.+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~Dvvf~a~~   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPE----ELSDVDVVFLALP   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGH----HHTTESEEEE-SC
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cchh----HhhcCCEEEecCc
Confidence            68999999999999999999853 56666555444 2   222222  1121 22222 3322    3489999999955


Q ss_pred             ch----HHhhhhhcCCCEEEEecccc
Q 022625          173 GF----ISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       173 ~~----~~~~~~~~gv~r~V~vSs~~  194 (294)
                      ..    +...+.+.|+ ++|=.|+..
T Consensus        76 ~~~~~~~~~~~~~~g~-~ViD~s~~~  100 (121)
T PF01118_consen   76 HGASKELAPKLLKAGI-KVIDLSGDF  100 (121)
T ss_dssp             HHHHHHHHHHHHHTTS-EEEESSSTT
T ss_pred             hhHHHHHHHHHhhCCc-EEEeCCHHH
Confidence            32    3344456676 666666654

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.31  E-value=0.0015  Score=65.11  Aligned_cols=72  Identities=14%  Similarity=0.206  Sum_probs=62.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH-hcCCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~  171 (294)
                      ...++|.|+ |.+|+.++++|.++|++|++++.|+++..+....+...+.+|.+|++.++++ ++++|+++.+.
T Consensus       417 ~~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~  489 (558)
T PRK10669        417 CNHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTI  489 (558)
T ss_pred             CCCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEc
Confidence            467899997 8999999999999999999999999887766666899999999999988764 57889888773

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.31  E-value=0.00091  Score=62.51  Aligned_cols=87  Identities=16%  Similarity=0.155  Sum_probs=53.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEE---EEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCch---
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKA---LVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF---  174 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~---~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~---  174 (294)
                      +|+|.||||++|+++++.|.+++|.++.   +.+..+......-.+......|+.     ...++++|+||.+.+..   
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~D~v~~a~g~~~s~   75 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-----IESFEGIDIALFSAGGSVSK   75 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-----hHHhcCCCEEEECCCHHHHH
Confidence            5899999999999999999998876543   335543322211123455556664     12357899999985533   


Q ss_pred             -HHhhhhhcCCCEEEEeccc
Q 022625          175 -ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       175 -~~~~~~~~gv~r~V~vSs~  193 (294)
                       ++....+.|+ ++|=.|+.
T Consensus        76 ~~a~~~~~~G~-~VID~ss~   94 (339)
T TIGR01296        76 EFAPKAAKCGA-IVIDNTSA   94 (339)
T ss_pred             HHHHHHHHCCC-EEEECCHH
Confidence             2223344565 45555553

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.28  E-value=0.0012  Score=61.87  Aligned_cols=94  Identities=13%  Similarity=0.006  Sum_probs=58.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCccchh---hhcCCCcEEe-ecCCCCHHHHHHHhcCCcEEEEcCCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAM---ESFGTYVESM-AGDASNKKFLKTALRGVRSIICPSEG  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~~~~---~~~~~~v~~v-~~D~~d~~~l~~~l~~~d~Vi~~~~~  173 (294)
                      +++|+|.||||.+|+++++.|.++ +++++++.+..+...   +..+ .+..+ ..++.+.+..  .+.++|+||.+.+.
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~-~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~   78 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHP-HLRGLVDLVLEPLDPE--ILAGADVVFLALPH   78 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCc-ccccccCceeecCCHH--HhcCCCEEEECCCc
Confidence            579999999999999999999986 678888877433221   1111 11111 2233333322  45789999998442


Q ss_pred             -h---HHhhhhhcCCCEEEEecccccc
Q 022625          174 -F---ISNAGSLKGVQHVILLSQLSVY  196 (294)
Q Consensus       174 -~---~~~~~~~~gv~r~V~vSs~~~~  196 (294)
                       .   +...+.+.| +++|=.|+..-.
T Consensus        79 ~~~~~~v~~a~~aG-~~VID~S~~fR~  104 (343)
T PRK00436         79 GVSMDLAPQLLEAG-VKVIDLSADFRL  104 (343)
T ss_pred             HHHHHHHHHHHhCC-CEEEECCcccCC
Confidence             2   233344455 578877876543

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.27  E-value=0.0035  Score=55.45  Aligned_cols=67  Identities=15%  Similarity=0.255  Sum_probs=53.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch-----hhhc-------CCCcEEeecCCCCHHHHHHHhcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MESF-------GTYVESMAGDASNKKFLKTALRGV  164 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~-----~~~~-------~~~v~~v~~D~~d~~~l~~~l~~~  164 (294)
                      +.|..||||=||.=|++|+..|+.+|++|..+.|..+..     ..+.       +..++..-+|++|.+.+.+.+..+
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence            457889999999999999999999999999999876541     1111       124666779999999988887644

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.25  E-value=0.0026  Score=51.13  Aligned_cols=92  Identities=15%  Similarity=0.155  Sum_probs=61.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc--------------------------hhhhcC-CCcEEeecC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN--------------------------AMESFG-TYVESMAGD  150 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~--------------------------~~~~~~-~~v~~v~~D  150 (294)
                      .++|+|.|+ |.+|+++++.|+..|. ++++++.+.-.                          +.+..+ ..++.+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            478999997 8999999999999998 67777654311                          000111 134555556


Q ss_pred             CCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEeccc
Q 022625          151 ASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       151 ~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vSs~  193 (294)
                      + +.+.+.+.++++|+||++.+..     +.+.+++.+. .+|+.+..
T Consensus        81 ~-~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~-p~i~~~~~  126 (135)
T PF00899_consen   81 I-DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGI-PFIDAGVN  126 (135)
T ss_dssp             C-SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT--EEEEEEEE
T ss_pred             c-ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCC-CEEEEEee
Confidence            6 5567788889999999985433     5556777775 57766654

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.25  E-value=0.0033  Score=63.21  Aligned_cols=73  Identities=19%  Similarity=0.236  Sum_probs=63.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH-hcCCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~  172 (294)
                      ...|+|.|. |.+|+.+++.|.++|+++++++.|+++.+.....+..++.+|.++++.++++ ++++|++|.+.+
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~  473 (601)
T PRK03659        400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCN  473 (601)
T ss_pred             cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeC
Confidence            467999996 8999999999999999999999999887766556789999999999998875 678899998844

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.21  E-value=0.0012  Score=61.69  Aligned_cols=90  Identities=13%  Similarity=0.106  Sum_probs=53.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEE--EEcCccchhhhcC-CCcEEeecCCCCHHHHHHHhcCCcEEEEcCC-ch
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA--LVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE-GF  174 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~--~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~-~~  174 (294)
                      +++|+|+||||++|+++++.|.+++|.+.-  ..++.+++.+... .+   ...++.+.+.. + ++++|+||.+.+ +.
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~---~~l~~~~~~~~-~-~~~vD~vFla~p~~~   78 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG---KNLRVREVDSF-D-FSQVQLAFFAAGAAV   78 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC---cceEEeeCChH-H-hcCCCEEEEcCCHHH
Confidence            478999999999999999999987764433  3344333221111 11   12333332221 2 578999999843 22


Q ss_pred             ---HHhhhhhcCCCEEEEecccc
Q 022625          175 ---ISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       175 ---~~~~~~~~gv~r~V~vSs~~  194 (294)
                         +...+.+.|+ ++|=.|+..
T Consensus        79 s~~~v~~~~~~G~-~VIDlS~~f  100 (336)
T PRK05671         79 SRSFAEKARAAGC-SVIDLSGAL  100 (336)
T ss_pred             HHHHHHHHHHCCC-eEEECchhh
Confidence               4444555665 466666554

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.19  E-value=0.0016  Score=59.45  Aligned_cols=71  Identities=8%  Similarity=-0.010  Sum_probs=54.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ...+++++|+|+ |.+|+.+++.|...|++|++..|++++.......+...     .+.+.+.+.++++|+||++.+
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~-----~~~~~l~~~l~~aDiVint~P  218 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIP-----FPLNKLEEKVAEIDIVINTIP  218 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee-----ecHHHHHHHhccCCEEEECCC
Confidence            567899999998 89999999999999999999999987654332222222     124556778899999999844

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.17  E-value=0.002  Score=62.20  Aligned_cols=68  Identities=16%  Similarity=0.108  Sum_probs=52.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc-ch----hhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NA----MESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~-~~----~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      +.+|+|+|+|+++ +|..+++.|+++|++|++.+++.. ..    .++...+++++.+|..+     +...++|+||++
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~   75 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVS   75 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEEC
Confidence            4579999999855 999999999999999999998752 22    11222367788888876     345678999997

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.14  E-value=0.0038  Score=54.02  Aligned_cols=96  Identities=15%  Similarity=0.187  Sum_probs=64.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCcc-------------------chhh------hcCCCc--EE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------NAME------SFGTYV--ES  146 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~-------------------~~~~------~~~~~v--~~  146 (294)
                      ..+..++|+|.|+ |++|+++++.|+..|. ++++++++.-                   |+..      ...+.+  +.
T Consensus        17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~   95 (202)
T TIGR02356        17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA   95 (202)
T ss_pred             HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            4567789999997 8999999999999997 7888877621                   1100      112233  33


Q ss_pred             eecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEeccc
Q 022625          147 MAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       147 v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vSs~  193 (294)
                      +...+. .+.+.+.++++|+||.+.+.+     +.+.+.+.++. +|+.+..
T Consensus        96 ~~~~i~-~~~~~~~~~~~D~Vi~~~d~~~~r~~l~~~~~~~~ip-~i~~~~~  145 (202)
T TIGR02356        96 LKERVT-AENLELLINNVDLVLDCTDNFATRYLINDACVALGTP-LISAAVV  145 (202)
T ss_pred             ehhcCC-HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEec
Confidence            344443 456778899999999985433     55667777754 6666543

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.12  E-value=0.0018  Score=60.68  Aligned_cols=93  Identities=12%  Similarity=0.014  Sum_probs=55.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEE-EcCcc--c-hhhhcCCCcEEe-ecCCCCHHHHHHHhcCCcEEEEcCCc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKAL-VKDKR--N-AMESFGTYVESM-AGDASNKKFLKTALRGVRSIICPSEG  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~-~R~~~--~-~~~~~~~~v~~v-~~D~~d~~~l~~~l~~~d~Vi~~~~~  173 (294)
                      ++|.|.||||++|+++++.|.++ +++++.+ .+..+  + ..+.++ .+... ..++.+. ...++++++|+||.+.+.
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~-~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~   78 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHP-HLRGLVDLNLEPI-DEEEIAEDADVVFLALPH   78 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCc-cccccCCceeecC-CHHHhhcCCCEEEECCCc
Confidence            57999999999999999999977 6788854 43332  1 222222 11111 1122211 123344689999998432


Q ss_pred             -h---HHhhhhhcCCCEEEEeccccc
Q 022625          174 -F---ISNAGSLKGVQHVILLSQLSV  195 (294)
Q Consensus       174 -~---~~~~~~~~gv~r~V~vSs~~~  195 (294)
                       .   +...+.+.| .++|-.|+..-
T Consensus        79 ~~s~~~~~~~~~~G-~~VIDlS~~fR  103 (346)
T TIGR01850        79 GVSAELAPELLAAG-VKVIDLSADFR  103 (346)
T ss_pred             hHHHHHHHHHHhCC-CEEEeCChhhh
Confidence             2   333344456 67888887654

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.08  E-value=0.0022  Score=54.78  Aligned_cols=70  Identities=14%  Similarity=0.166  Sum_probs=44.9

Q ss_pred             CCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH--HHHHH
Q 022625           98 ARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK--KFLKT  159 (294)
Q Consensus        98 ~~~~vlVtGa----------------tG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~--~~l~~  159 (294)
                      .+|+||||+|                ||..|.+|++.+..+|++|+++.... ...  .+.+++.+...-.+.  +.+.+
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~~--~p~~~~~i~v~sa~em~~~~~~   78 (185)
T PF04127_consen    2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS-SLP--PPPGVKVIRVESAEEMLEAVKE   78 (185)
T ss_dssp             TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT-S------TTEEEEE-SSHHHHHHHHHH
T ss_pred             CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc-ccc--ccccceEEEecchhhhhhhhcc
Confidence            4677777765                79999999999999999999998874 211  244677666433221  34455


Q ss_pred             HhcCCcEEEEc
Q 022625          160 ALRGVRSIICP  170 (294)
Q Consensus       160 ~l~~~d~Vi~~  170 (294)
                      .++.+|++|++
T Consensus        79 ~~~~~Di~I~a   89 (185)
T PF04127_consen   79 LLPSADIIIMA   89 (185)
T ss_dssp             HGGGGSEEEE-
T ss_pred             ccCcceeEEEe
Confidence            56678999998

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.03  E-value=0.0011  Score=61.00  Aligned_cols=96  Identities=13%  Similarity=0.072  Sum_probs=58.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-----------CCCc------EEeecCCCCHHHHHHHh
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----------GTYV------ESMAGDASNKKFLKTAL  161 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----------~~~v------~~v~~D~~d~~~l~~~l  161 (294)
                      .++|.|+| .|.+|..++..|+++|++|+++.|+++......           ..+.      ......+.-..++.+++
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~   80 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAV   80 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhh
Confidence            36899999 599999999999999999999999986543211           1110      00000111112455677


Q ss_pred             cCCcEEEEcCCc---h---HHhhhhhcCCCEEEEeccccc
Q 022625          162 RGVRSIICPSEG---F---ISNAGSLKGVQHVILLSQLSV  195 (294)
Q Consensus       162 ~~~d~Vi~~~~~---~---~~~~~~~~gv~r~V~vSs~~~  195 (294)
                      +++|+|+.+.+.   .   +...+......++++.||++.
T Consensus        81 ~~ad~Vi~avpe~~~~k~~~~~~l~~~~~~~~ii~ssts~  120 (308)
T PRK06129         81 ADADYVQESAPENLELKRALFAELDALAPPHAILASSTSA  120 (308)
T ss_pred             CCCCEEEECCcCCHHHHHHHHHHHHHhCCCcceEEEeCCC
Confidence            899999988332   1   111222233345566666554

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.03  E-value=0.0029  Score=59.38  Aligned_cols=91  Identities=15%  Similarity=0.130  Sum_probs=54.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEE------------eecCCCCHHHHHHHhcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVES------------MAGDASNKKFLKTALRGV  164 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~------------v~~D~~d~~~l~~~l~~~  164 (294)
                      ++++|+|+||+|++|+++++.|.++.. +++++.++.+........-+.+            +...-.+.+.    ++++
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~   77 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEA----VDDV   77 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHH----hcCC
Confidence            357999999999999999999997754 8888866654332211110000            1111123332    3689


Q ss_pred             cEEEEcCC-ch---HHhhhhhcCCCEEEEecc
Q 022625          165 RSIICPSE-GF---ISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       165 d~Vi~~~~-~~---~~~~~~~~gv~r~V~vSs  192 (294)
                      |+||.+.+ +.   +.+.+.+.|++.|.+.++
T Consensus        78 DvVf~a~p~~~s~~~~~~~~~~G~~vIDls~~  109 (349)
T PRK08664         78 DIVFSALPSDVAGEVEEEFAKAGKPVFSNASA  109 (349)
T ss_pred             CEEEEeCChhHHHHHHHHHHHCCCEEEECCch
Confidence            99988733 22   334455677764444443

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.02  E-value=0.00089  Score=60.79  Aligned_cols=71  Identities=18%  Similarity=0.154  Sum_probs=50.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchhhhcCC--CcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT--YVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~--~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ...+++++|+|+ |++|+.++..|...| .+|+++.|+.+++.+....  ....+..++    ...+.+.++|+||+++
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~----~~~~~~~~~DivInaT  193 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDL----ELQEELADFDLIINAT  193 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecc----cchhccccCCEEEECC
Confidence            456789999997 999999999999999 7999999998876543211  100011111    2235667899999983

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.00  E-value=0.0015  Score=53.36  Aligned_cols=70  Identities=14%  Similarity=0.044  Sum_probs=49.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchhhhcCC-CcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      .+++++|+|+ |.+|..+++.|.+.| ++|.++.|++++..+.... ....+..+..+.   .+.++++|+||++.
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dvvi~~~   89 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDL---EELLAEADLIINTT   89 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecch---hhccccCCEEEeCc
Confidence            4689999998 999999999999996 7899999988765442211 111112233443   34478899999983

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.00  E-value=0.0012  Score=55.04  Aligned_cols=64  Identities=9%  Similarity=-0.034  Sum_probs=47.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      |++|.+.|- |..|+.+++.|+++|++|.+..|++++..+....+++..       ++..++.+++|+||.+
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~~~~dvvi~~   64 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVA-------DSPAEAAEQADVVILC   64 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEE-------SSHHHHHHHBSEEEE-
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhh-------hhhhhHhhcccceEee
Confidence            579999996 999999999999999999999999988766544443221       2345667777999987

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.99  E-value=0.0023  Score=55.35  Aligned_cols=90  Identities=8%  Similarity=0.066  Sum_probs=55.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC-----c
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-----G  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~-----~  173 (294)
                      +|++.|.| +|.||..++++|.+.||+|++..|+.++..+.........    -...+...+.+.+|+||.+.+     +
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~----i~~~~~~dA~~~aDVVvLAVP~~a~~~   75 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL----ITGGSNEDAAALADVVVLAVPFEAIPD   75 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc----cccCChHHHHhcCCEEEEeccHHHHHh
Confidence            35666666 6999999999999999999999776654332221111111    122344567888999999833     2


Q ss_pred             hHHhhhhhcCCCEEEEecccc
Q 022625          174 FISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       174 ~~~~~~~~~gv~r~V~vSs~~  194 (294)
                      .+.+.....+ .++|.-.+..
T Consensus        76 v~~~l~~~~~-~KIvID~tnp   95 (211)
T COG2085          76 VLAELRDALG-GKIVIDATNP   95 (211)
T ss_pred             HHHHHHHHhC-CeEEEecCCC
Confidence            2333333344 4666555543

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.93  E-value=0.0034  Score=59.42  Aligned_cols=72  Identities=11%  Similarity=0.032  Sum_probs=55.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ...+|+|.|+ |.+|...++.|...|.+|+++.|+++++.......-..+..+..+.+.+.+.+.++|+||++
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a  237 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGA  237 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEc
Confidence            4577999997 99999999999999999999999887654332111112334566778888899999999987

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.93  E-value=0.0093  Score=51.56  Aligned_cols=77  Identities=9%  Similarity=0.114  Sum_probs=55.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcC---ccchhh---------------------hcCC--CcEEe
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAME---------------------SFGT--YVESM  147 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~---~~~~~~---------------------~~~~--~v~~v  147 (294)
                      ..+..++|+|.|+ |++|+.++..|++.|. ++++++++   .+.+..                     ...+  .++.+
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~   95 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAY   95 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEe
Confidence            4556789999998 8899999999999998 68888877   322110                     0112  23444


Q ss_pred             ecCCCCHHHHHHHhcCCcEEEEcCCc
Q 022625          148 AGDASNKKFLKTALRGVRSIICPSEG  173 (294)
Q Consensus       148 ~~D~~d~~~l~~~l~~~d~Vi~~~~~  173 (294)
                      ..+++ .+.+.++++++|+||.+.+.
T Consensus        96 ~~~i~-~~~~~~~~~~~DlVi~a~Dn  120 (200)
T TIGR02354        96 DEKIT-EENIDKFFKDADIVCEAFDN  120 (200)
T ss_pred             eeeCC-HhHHHHHhcCCCEEEECCCC
Confidence            45554 46678889999999998544

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd00704 MDH Malate dehydrogenase

Probab=96.89  E-value=0.0027  Score=58.98  Aligned_cols=62  Identities=16%  Similarity=0.161  Sum_probs=45.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-------eEEEEEcCc--cchhhhcCCCcEEeecCCCCH-----------HHHHHH
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDK--RNAMESFGTYVESMAGDASNK-----------KFLKTA  160 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~-------~V~~~~R~~--~~~~~~~~~~v~~v~~D~~d~-----------~~l~~~  160 (294)
                      +|.|+||+|.+|+.++..|+.++.       +++++++++  +.+        +....|+.|.           ....+.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~--------~g~~~Dl~d~~~~~~~~~~i~~~~~~~   73 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL--------EGVVMELQDCAFPLLKGVVITTDPEEA   73 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc--------ceeeeehhhhcccccCCcEEecChHHH
Confidence            789999999999999999987652       588888876  322        2222333332           345688


Q ss_pred             hcCCcEEEEc
Q 022625          161 LRGVRSIICP  170 (294)
Q Consensus       161 l~~~d~Vi~~  170 (294)
                      ++++|+||++
T Consensus        74 ~~~aDiVVit   83 (323)
T cd00704          74 FKDVDVAILV   83 (323)
T ss_pred             hCCCCEEEEe
Confidence            9999999998

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.89  E-value=0.011  Score=52.53  Aligned_cols=95  Identities=8%  Similarity=0.064  Sum_probs=62.7

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc-------------------hh---h---hcCCC--cEE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------AM---E---SFGTY--VES  146 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~~---~---~~~~~--v~~  146 (294)
                      ..+...+|+|.|+ |++|+.++..|+..|. ++++++.+.-.                   +.   +   ...+.  ++.
T Consensus        20 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~   98 (240)
T TIGR02355        20 EALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINP   98 (240)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            4566789999997 8999999999999996 66666654311                   00   0   01223  333


Q ss_pred             eecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEecc
Q 022625          147 MAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       147 v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vSs  192 (294)
                      +...+ +.+.+.++++++|+||.+.+.+     +.+++.+.+++ +|+.+.
T Consensus        99 ~~~~i-~~~~~~~~~~~~DlVvd~~D~~~~r~~ln~~~~~~~ip-~v~~~~  147 (240)
T TIGR02355        99 INAKL-DDAELAALIAEHDIVVDCTDNVEVRNQLNRQCFAAKVP-LVSGAA  147 (240)
T ss_pred             EeccC-CHHHHHHHhhcCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEEEe
Confidence            43344 3456778899999999985543     55677787764 555444

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.86  E-value=0.0059  Score=52.76  Aligned_cols=81  Identities=6%  Similarity=-0.030  Sum_probs=53.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCC-CcEEeecCCCCHHHHHHHh-cCCcEEEEc-CC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTAL-RGVRSIICP-SE  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l-~~~d~Vi~~-~~  172 (294)
                      .+.+|+|+|+|. |.+|+.+++.|.+.|++|++.++++++....... +.+.+  |.   +   +++ ..+|+++.+ .+
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v--~~---~---~l~~~~~Dv~vp~A~~   95 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVV--AP---E---EIYSVDADVFAPCALG   95 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE--cc---h---hhccccCCEEEecccc
Confidence            456899999998 7999999999999999999888887654432221 22222  21   1   223 268999966 33


Q ss_pred             ch-HHhhhhhcCCC
Q 022625          173 GF-ISNAGSLKGVQ  185 (294)
Q Consensus       173 ~~-~~~~~~~~gv~  185 (294)
                      +. -.+.+.+.+.+
T Consensus        96 ~~I~~~~~~~l~~~  109 (200)
T cd01075          96 GVINDDTIPQLKAK  109 (200)
T ss_pred             cccCHHHHHHcCCC
Confidence            32 22334555554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.82  E-value=0.0058  Score=56.05  Aligned_cols=71  Identities=10%  Similarity=0.008  Sum_probs=54.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ...+++++|.|+ |.+|+.++..|...|.+|+++.|++++.......+.+++     +.+.+.+.+.++|+||++.+
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t~p  219 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-----HLSELAEEVGKIDIIFNTIP  219 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-----cHHHHHHHhCCCCEEEECCC
Confidence            456899999997 899999999999999999999999765433222233332     23456778899999999854

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.82  E-value=0.0096  Score=52.42  Aligned_cols=95  Identities=14%  Similarity=0.148  Sum_probs=62.3

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc-------------------hhh------hcCC--CcEE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------AME------SFGT--YVES  146 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~~~------~~~~--~v~~  146 (294)
                      ..+..++|+|.|+ |++|+++++.|+..|. ++++++.+.-.                   +..      ...+  .++.
T Consensus        17 ~~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~   95 (228)
T cd00757          17 EKLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEA   95 (228)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            4556789999997 8899999999999997 55555433210                   000      0112  3444


Q ss_pred             eecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEecc
Q 022625          147 MAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       147 v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vSs  192 (294)
                      +..++ +.+.+.+.++++|+||.+.+..     +.+.+.+.++ .+|+.+.
T Consensus        96 ~~~~i-~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~i-p~i~~g~  144 (228)
T cd00757          96 YNERL-DAENAEELIAGYDLVLDCTDNFATRYLINDACVKLGK-PLVSGAV  144 (228)
T ss_pred             eccee-CHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCC-CEEEEEe
Confidence            55555 3466778889999999985432     5566777775 4555543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.82  E-value=0.031  Score=49.46  Aligned_cols=130  Identities=12%  Similarity=0.047  Sum_probs=72.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc-------------------hh---h---hcCC--CcEE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------AM---E---SFGT--YVES  146 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~~---~---~~~~--~v~~  146 (294)
                      ..+...+|+|.|+ |++|+++++.|++.|. ++++++.+.-.                   ..   +   ...+  .++.
T Consensus         7 ~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~   85 (231)
T cd00755           7 EKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDA   85 (231)
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            3456789999997 8899999999999996 66666654210                   00   0   0122  2333


Q ss_pred             eecCCCCHHHHHHHhc-CCcEEEEcCCch-----HHhhhhhcCCCEEEEeccccc-ccCCCC-chhccchhHHHHHHHHH
Q 022625          147 MAGDASNKKFLKTALR-GVRSIICPSEGF-----ISNAGSLKGVQHVILLSQLSV-YRGSGG-IQALMKGNARKLAEQDE  218 (294)
Q Consensus       147 v~~D~~d~~~l~~~l~-~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vSs~~~-~~~~~~-~~~~~~~~~~~~~~~ae  218 (294)
                      +...++ .+.+...+. ++|+||.+.+..     +.+.|.+.+++ ||...+.+. .+|... .........=.+.+...
T Consensus        86 ~~~~i~-~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip-~I~s~g~g~~~dp~~i~i~di~~t~~~pla~~~R  163 (231)
T cd00755          86 VEEFLT-PDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIP-VISSMGAGGKLDPTRIRVADISKTSGDPLARKVR  163 (231)
T ss_pred             eeeecC-HhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCC-EEEEeCCcCCCCCCeEEEccEeccccCcHHHHHH
Confidence            444443 455556664 689999985432     55667777754 444433322 122211 11111111111345677


Q ss_pred             HHHHhCCCC
Q 022625          219 SMLMASGIP  227 (294)
Q Consensus       219 ~~l~~~gl~  227 (294)
                      ..|+..++.
T Consensus       164 ~~Lrk~~~~  172 (231)
T cd00755         164 KRLRKRGIF  172 (231)
T ss_pred             HHHHHcCCC
Confidence            778887765

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.81  E-value=0.0064  Score=61.42  Aligned_cols=73  Identities=16%  Similarity=0.193  Sum_probs=63.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHH-HhcCCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT-ALRGVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~-~l~~~d~Vi~~~~  172 (294)
                      .+.|+|.|. |.+|+.+++.|.++|++++++..|+++.+.....+..++.+|.+|++.+++ -++.+|.+|.+.+
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~  473 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID  473 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeC
Confidence            478999997 899999999999999999999999998776655678999999999998875 4678899998843

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=96.81  E-value=0.0021  Score=56.62  Aligned_cols=63  Identities=8%  Similarity=0.116  Sum_probs=43.6

Q ss_pred             EEEc-CCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHh-------cCCcEEEEcC
Q 022625          103 LVTD-GDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIICPS  171 (294)
Q Consensus       103 lVtG-atG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l-------~~~d~Vi~~~  171 (294)
                      .||. ++|+||++++++|+++|++|+++.+... ..   ..  ....+|+.+.+++.+++       ..+|++||++
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~---~~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnA   88 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-LK---PE--PHPNLSIREIETTKDLLITLKELVQEHDILIHSM   88 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-cc---cc--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            4444 4889999999999999999999876321 11   10  12346888776655443       4579999984

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.80  E-value=0.012  Score=55.43  Aligned_cols=94  Identities=20%  Similarity=0.165  Sum_probs=63.3

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc-------------------hh---h---hcCC--CcEE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------AM---E---SFGT--YVES  146 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~~---~---~~~~--~v~~  146 (294)
                      ..+...+|+|.|+ |++|+++++.|+..|. ++++++.+.-.                   +.   +   ...+  .++.
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~  102 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV  102 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence            4556789999998 8899999999999997 66666665311                   00   0   0122  3444


Q ss_pred             eecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEec
Q 022625          147 MAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLS  191 (294)
Q Consensus       147 v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vS  191 (294)
                      +...++ .+.+.+.++++|+||.+.+.+     +.++|.+.++. +|+.+
T Consensus       103 ~~~~i~-~~~~~~~~~~~DvVvd~~d~~~~r~~~n~~c~~~~ip-~v~~~  150 (355)
T PRK05597        103 SVRRLT-WSNALDELRDADVILDGSDNFDTRHLASWAAARLGIP-HVWAS  150 (355)
T ss_pred             EEeecC-HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEE
Confidence            445554 456677889999999996543     55667777764 55443

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.79  E-value=0.0023  Score=56.00  Aligned_cols=71  Identities=18%  Similarity=0.139  Sum_probs=48.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCC---CcEEeecC--CCCHHHHHHHhcCCcEEEEcC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT---YVESMAGD--ASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~---~v~~v~~D--~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      |+|.|.||+|.+|..++..|++.|++|++..|++++.......   .+.....+  +.. ....++++.+|+||.+.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~-~~~~ea~~~aDvVilav   76 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG-ADNAEAAKRADVVILAV   76 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE-eChHHHHhcCCEEEEEC
Confidence            5799999999999999999999999999999998765432211   00000000  100 01245677899999883

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.78  E-value=0.0056  Score=51.48  Aligned_cols=56  Identities=16%  Similarity=0.182  Sum_probs=46.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+.+++|+|.|+.+.+|..+++.|.++|.+|.++.|+.                     +.+.+.+.++|+||.++
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~---------------------~~l~~~l~~aDiVIsat   95 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT---------------------KNLKEHTKQADIVIVAV   95 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc---------------------hhHHHHHhhCCEEEEcC
Confidence            457889999999966679999999999999998888762                     35567888999999983

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.77  E-value=0.0056  Score=50.99  Aligned_cols=69  Identities=20%  Similarity=0.149  Sum_probs=49.9

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ..+.+|+++|+|- |.+|+.+++.|...|.+|++...+|-++.+..-+++++.        .+.++++..|++|.+++
T Consensus        19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~--------~~~~a~~~adi~vtaTG   87 (162)
T PF00670_consen   19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVM--------TLEEALRDADIFVTATG   87 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE---------HHHHTTT-SEEEE-SS
T ss_pred             eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEec--------CHHHHHhhCCEEEECCC
Confidence            4567899999997 999999999999999999999999988776655566543        25678899999998854

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.75  E-value=0.018  Score=51.42  Aligned_cols=89  Identities=16%  Similarity=0.134  Sum_probs=68.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEcCCch--
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEGF--  174 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~~~--  174 (294)
                      +++|+|.|||+ =|+.++..|.++|+.|++-+-......  ....+.+..+-+.|.+.+.++++  ++++||.++..|  
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~~--~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~   78 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGGP--ADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYAA   78 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCCc--ccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccHH
Confidence            57899999975 799999999999999888776654331  22367788888889999999996  679999985544  


Q ss_pred             -----HHhhhhhcCCCEEEEe
Q 022625          175 -----ISNAGSLKGVQHVILL  190 (294)
Q Consensus       175 -----~~~~~~~~gv~r~V~v  190 (294)
                           ..++|++.++..+=|.
T Consensus        79 ~is~~a~~ac~~~~ipyiR~e   99 (248)
T PRK08057         79 QISANAAAACRALGIPYLRLE   99 (248)
T ss_pred             HHHHHHHHHHHHhCCcEEEEe
Confidence                 4556777777655544

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.68  E-value=0.017  Score=54.65  Aligned_cols=69  Identities=14%  Similarity=0.189  Sum_probs=55.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      +++|+|.|+ |.+|+.++..+.+.|++|++++.++........  -+++.+|+.|.+.+.++.+.+|+|..-
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~a--d~~~~~~~~D~~~l~~~a~~~dvit~e   70 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVA--DEVIVADYDDVAALRELAEQCDVITYE   70 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhC--ceEEecCCCCHHHHHHHHhcCCEEEeC
Confidence            578999998 899999999999999999999887654222222  245668999999999999999988654

>PRK08328 hypothetical protein; Provisional

Probab=96.67  E-value=0.022  Score=50.32  Aligned_cols=96  Identities=19%  Similarity=0.278  Sum_probs=62.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchh--------------------------hhcCC--CcE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--------------------------ESFGT--YVE  145 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~--------------------------~~~~~--~v~  145 (294)
                      ..+.+.+|+|.|+ |++|++++..|+..|. ++++++.+.-...                          ....+  .++
T Consensus        23 ~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~  101 (231)
T PRK08328         23 EKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIE  101 (231)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEE
Confidence            4556789999997 8899999999999996 5666654321100                          01122  233


Q ss_pred             EeecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEeccc
Q 022625          146 SMAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       146 ~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vSs~  193 (294)
                      .+...+ +.+.+.++++++|+||.+...+     +.++|++.+++ +|+.+..
T Consensus       102 ~~~~~~-~~~~~~~~l~~~D~Vid~~d~~~~r~~l~~~~~~~~ip-~i~g~~~  152 (231)
T PRK08328        102 TFVGRL-SEENIDEVLKGVDVIVDCLDNFETRYLLDDYAHKKGIP-LVHGAVE  152 (231)
T ss_pred             EEeccC-CHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEeec
Confidence            444455 3455777899999999984432     45567777754 6655544

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.66  E-value=0.017  Score=50.43  Aligned_cols=96  Identities=9%  Similarity=0.135  Sum_probs=62.3

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCc---cc---------------hhh------hcCC--CcEE
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK---RN---------------AME------SFGT--YVES  146 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~---~~---------------~~~------~~~~--~v~~  146 (294)
                      ...+...+|+|.|+ |++|+++++.|+..|. ++++++.+.   +.               +..      ...+  .++.
T Consensus        23 q~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~  101 (212)
T PRK08644         23 LEKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEA  101 (212)
T ss_pred             HHHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence            34567789999997 8999999999999997 577777762   11               000      0122  3344


Q ss_pred             eecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhc-CCCEEEEecc
Q 022625          147 MAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLK-GVQHVILLSQ  192 (294)
Q Consensus       147 v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~-gv~r~V~vSs  192 (294)
                      +...+++ +.+.+.++++|+||.+.+.+     +.+.+.+. ++ .+|+.+.
T Consensus       102 ~~~~i~~-~~~~~~~~~~DvVI~a~D~~~~r~~l~~~~~~~~~~-p~I~~~~  151 (212)
T PRK08644        102 HNEKIDE-DNIEELFKDCDIVVEAFDNAETKAMLVETVLEHPGK-KLVAASG  151 (212)
T ss_pred             EeeecCH-HHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHhCCC-CEEEeeh
Confidence            4445543 55677889999999885433     44555665 54 4665543

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.66  E-value=0.021  Score=49.27  Aligned_cols=99  Identities=10%  Similarity=0.190  Sum_probs=63.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc---h------------------------hhhcCC--Cc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---A------------------------MESFGT--YV  144 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~---~------------------------~~~~~~--~v  144 (294)
                      ..+...+|+|.|+ |++|.++++.|+..|. ++++++.+.-.   +                        .....+  .+
T Consensus        15 ~~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i   93 (198)
T cd01485          15 NKLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKL   93 (198)
T ss_pred             HHHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEE
Confidence            3456789999998 5599999999999997 56666654210   0                        001123  34


Q ss_pred             EEeecCCCC-HHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEeccccc
Q 022625          145 ESMAGDASN-KKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQLSV  195 (294)
Q Consensus       145 ~~v~~D~~d-~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vSs~~~  195 (294)
                      +.+..++.+ .+...+.+..+|+||.+...+     +.+.|++.++ .+|+.++.+.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~dvVi~~~d~~~~~~~ln~~c~~~~i-p~i~~~~~G~  149 (198)
T cd01485          94 SIVEEDSLSNDSNIEEYLQKFTLVIATEENYERTAKVNDVCRKHHI-PFISCATYGL  149 (198)
T ss_pred             EEEecccccchhhHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCC-CEEEEEeecC
Confidence            444445542 445667889999999984432     5567788776 4666665443

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.62  E-value=0.013  Score=54.13  Aligned_cols=96  Identities=10%  Similarity=0.019  Sum_probs=60.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCC---CH-HHHHHHh-cCCcEEEEc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDAS---NK-KFLKTAL-RGVRSIICP  170 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~---d~-~~l~~~l-~~~d~Vi~~  170 (294)
                      .++.+|+|+||+|.+|..+++.+...|.+|+++++++++...... -+.+.+ .|..   +. +.+.+.. .++|++|.+
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d~  228 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDA-FNYKEEPDLDAALKRYFPNGIDIYFDN  228 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCcee-EEcCCcccHHHHHHHhCCCCcEEEEEC
Confidence            467899999999999999998888899999999998876554322 223222 2222   21 2233322 468999998


Q ss_pred             CCch-HHhhhhh-cCCCEEEEeccc
Q 022625          171 SEGF-ISNAGSL-KGVQHVILLSQL  193 (294)
Q Consensus       171 ~~~~-~~~~~~~-~gv~r~V~vSs~  193 (294)
                      .++. +.++... ..-.+|+.++..
T Consensus       229 ~g~~~~~~~~~~l~~~G~iv~~G~~  253 (338)
T cd08295         229 VGGKMLDAVLLNMNLHGRIAACGMI  253 (338)
T ss_pred             CCHHHHHHHHHHhccCcEEEEeccc
Confidence            5543 2222221 123578877653

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.62  E-value=0.011  Score=46.97  Aligned_cols=86  Identities=12%  Similarity=0.089  Sum_probs=49.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHH-CCCeEEEEE-cCccchh-hhcC--CCcEEeecCCCCHHHHHHHhcCCcEEEEcC-Cc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIV-KRTRIKALV-KDKRNAM-ESFG--TYVESMAGDASNKKFLKTALRGVRSIICPS-EG  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~-~g~~V~~~~-R~~~~~~-~~~~--~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~-~~  173 (294)
                      ++|+|.|++|.+|+.+++.+.+ .++++.+.. |+++... ...+  .+..  ...+.-.++++++++.+|++|..+ +.
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~DVvIDfT~p~   78 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEADVVIDFTNPD   78 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-SEEEEES-HH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCCEEEEcCChH
Confidence            4899999999999999999998 688877765 4442211 0000  0000  111111145667777799999874 22


Q ss_pred             h---HHhhhhhcCCCEE
Q 022625          174 F---ISNAGSLKGVQHV  187 (294)
Q Consensus       174 ~---~~~~~~~~gv~r~  187 (294)
                      .   ..+.+.++|+.-+
T Consensus        79 ~~~~~~~~~~~~g~~~V   95 (124)
T PF01113_consen   79 AVYDNLEYALKHGVPLV   95 (124)
T ss_dssp             HHHHHHHHHHHHT-EEE
T ss_pred             HhHHHHHHHHhCCCCEE
Confidence            1   4455666775433

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=96.61  E-value=0.016  Score=54.25  Aligned_cols=89  Identities=13%  Similarity=0.130  Sum_probs=52.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe---EEEEE--cCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTR---IKALV--KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~---V~~~~--R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ..++|.|.||||++|+++++.|.+++|.   +..+.  |+..+....  .+......++. .    +.++++|+||.+.+
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~--~~~~~~v~~~~-~----~~~~~~D~vf~a~p   78 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF--EGRDYTVEELT-E----DSFDGVDIALFSAG   78 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee--cCceeEEEeCC-H----HHHcCCCEEEECCC
Confidence            3578999999999999999999998873   33332  332222111  11223333332 2    23578999999843


Q ss_pred             -ch---HHhhhhhcCCCEEEEecccc
Q 022625          173 -GF---ISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       173 -~~---~~~~~~~~gv~r~V~vSs~~  194 (294)
                       +.   +...+.+.|+ ++|=.|+..
T Consensus        79 ~~~s~~~~~~~~~~g~-~VIDlS~~f  103 (344)
T PLN02383         79 GSISKKFGPIAVDKGA-VVVDNSSAF  103 (344)
T ss_pred             cHHHHHHHHHHHhCCC-EEEECCchh
Confidence             22   2222334453 566677654

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.60  E-value=0.016  Score=55.00  Aligned_cols=93  Identities=14%  Similarity=0.194  Sum_probs=62.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCc-------------------cchhh---h---cCCCc--EEe
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAME---S---FGTYV--ESM  147 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~-------------------~~~~~---~---~~~~v--~~v  147 (294)
                      .+..++|+|.|+ |++|++++..|+..|. ++++++++.                   .|+..   .   ..+.+  +.+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            457789999987 8899999999999997 777777762                   11111   0   12233  334


Q ss_pred             ecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEec
Q 022625          148 AGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLS  191 (294)
Q Consensus       148 ~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vS  191 (294)
                      ...++ .+.+.+.++++|+||.+.+.+     +.++|.+.++. +|+.+
T Consensus       211 ~~~~~-~~~~~~~~~~~D~Vv~~~d~~~~r~~ln~~~~~~~ip-~i~~~  257 (376)
T PRK08762        211 QERVT-SDNVEALLQDVDVVVDGADNFPTRYLLNDACVKLGKP-LVYGA  257 (376)
T ss_pred             eccCC-hHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEE
Confidence            44443 356777889999999995543     55667777754 55554

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.59  E-value=0.014  Score=52.44  Aligned_cols=64  Identities=16%  Similarity=0.074  Sum_probs=42.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEc-CccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVK-DKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R-~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ++|+|+|++|.+|+.+++.+.+. ++++++++. ++++....       -..++...+++.++++++|+||.+
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-------~~~~i~~~~dl~~ll~~~DvVid~   67 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-------GALGVAITDDLEAVLADADVLIDF   67 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-------CCCCccccCCHHHhccCCCEEEEC
Confidence            68999999999999999988864 688888654 44333221       112232233455556678888866

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.58  E-value=0.018  Score=54.94  Aligned_cols=94  Identities=16%  Similarity=0.145  Sum_probs=61.7

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc-------------------hh---h---hcCCC--cEE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------AM---E---SFGTY--VES  146 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~~---~---~~~~~--v~~  146 (294)
                      ..+...+|+|.|+ |++|.+++..|+..|. ++++++.+.-.                   +.   +   ...+.  ++.
T Consensus        38 ~~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~  116 (392)
T PRK07878         38 KRLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRL  116 (392)
T ss_pred             HHHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEE
Confidence            4556789999998 8899999999999997 56665543211                   00   0   01223  344


Q ss_pred             eecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEec
Q 022625          147 MAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLS  191 (294)
Q Consensus       147 v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vS  191 (294)
                      +...++ .+.+.++++++|+||.+.+.+     +.++|.+.++. ||+.+
T Consensus       117 ~~~~i~-~~~~~~~~~~~D~Vvd~~d~~~~r~~ln~~~~~~~~p-~v~~~  164 (392)
T PRK07878        117 HEFRLD-PSNAVELFSQYDLILDGTDNFATRYLVNDAAVLAGKP-YVWGS  164 (392)
T ss_pred             EeccCC-hhHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEE
Confidence            455554 345677899999999985543     55667777754 55543

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.55  E-value=0.0063  Score=51.46  Aligned_cols=68  Identities=15%  Similarity=-0.021  Sum_probs=48.5

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ...+.+++|.|.|. |.||+.+++.|...|.+|++..|............+        ...++.++++.+|+|++.
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~--------~~~~l~ell~~aDiv~~~   98 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGV--------EYVSLDELLAQADIVSLH   98 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTE--------EESSHHHHHHH-SEEEE-
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcccccc--------eeeehhhhcchhhhhhhh
Confidence            34667899999996 999999999999999999999999875431111111        122456788889999976

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.52  E-value=0.015  Score=53.32  Aligned_cols=97  Identities=12%  Similarity=0.060  Sum_probs=60.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCC---HHH-HHHHh-cCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKF-LKTAL-RGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d---~~~-l~~~l-~~~d~Vi~~~  171 (294)
                      .++.+|+|+||+|.+|..+++.+...|.+|+++++++++......-+.+.+ .|..+   ... +.... +++|++|.+.
T Consensus       137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~gvdvv~d~~  215 (325)
T TIGR02825       137 KGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVA-FNYKTVKSLEETLKKASPDGYDCYFDNV  215 (325)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeccccccHHHHHHHhCCCCeEEEEECC
Confidence            357899999999999999998888889999999988876544322233222 22222   222 22222 3689999985


Q ss_pred             Cch-HHhhhhh-cCCCEEEEecccc
Q 022625          172 EGF-ISNAGSL-KGVQHVILLSQLS  194 (294)
Q Consensus       172 ~~~-~~~~~~~-~gv~r~V~vSs~~  194 (294)
                      ++. +..+... ..-.++|.++...
T Consensus       216 G~~~~~~~~~~l~~~G~iv~~G~~~  240 (325)
T TIGR02825       216 GGEFSNTVIGQMKKFGRIAICGAIS  240 (325)
T ss_pred             CHHHHHHHHHHhCcCcEEEEecchh
Confidence            543 2222221 1235788887543

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK08223 hypothetical protein; Validated

Probab=96.52  E-value=0.017  Score=52.64  Aligned_cols=96  Identities=15%  Similarity=0.147  Sum_probs=64.0

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc-------------------h---hh---hcCC--CcE
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------A---ME---SFGT--YVE  145 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~---~~---~~~~--~v~  145 (294)
                      ...+...+|+|.|+ |++|..++..|+..|. ++.+++.+.-.                   .   .+   ..++  .++
T Consensus        22 Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~  100 (287)
T PRK08223         22 QQRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIR  100 (287)
T ss_pred             HHHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEE
Confidence            45667899999998 8899999999999996 66666554311                   0   00   1123  344


Q ss_pred             EeecCCCCHHHHHHHhcCCcEEEEcCCch-------HHhhhhhcCCCEEEEecc
Q 022625          146 SMAGDASNKKFLKTALRGVRSIICPSEGF-------ISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       146 ~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-------~~~~~~~~gv~r~V~vSs  192 (294)
                      .+...++ .+.+.++++++|+||.+.+.+       +.++|.+.++. +|+.+.
T Consensus       101 ~~~~~l~-~~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP-~V~~~~  152 (287)
T PRK08223        101 AFPEGIG-KENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRGIP-ALTAAP  152 (287)
T ss_pred             EEecccC-ccCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcCCC-EEEEec
Confidence            4555554 345678899999999885532       55678888754 555543

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.52  E-value=0.0093  Score=55.46  Aligned_cols=96  Identities=10%  Similarity=0.034  Sum_probs=65.1

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG  173 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~  173 (294)
                      ....++++|+|+|+ |++|..-++.+...|++|++++|++++.+....-+.+.+.-.- |.+.++..-+.+|+++.+...
T Consensus       162 ~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~-~~~~~~~~~~~~d~ii~tv~~  239 (339)
T COG1064         162 ANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSS-DSDALEAVKEIADAIIDTVGP  239 (339)
T ss_pred             cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcC-CchhhHHhHhhCcEEEECCCh
Confidence            44557899999998 5999999988888999999999999987554333333333222 555555544459999998443


Q ss_pred             h----HHhhhhhcCCCEEEEeccc
Q 022625          174 F----ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       174 ~----~~~~~~~~gv~r~V~vSs~  193 (294)
                      .    ..++++..  .++|.++=.
T Consensus       240 ~~~~~~l~~l~~~--G~~v~vG~~  261 (339)
T COG1064         240 ATLEPSLKALRRG--GTLVLVGLP  261 (339)
T ss_pred             hhHHHHHHHHhcC--CEEEEECCC
Confidence            2    22233333  468887754

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.51  E-value=0.0096  Score=57.24  Aligned_cols=68  Identities=16%  Similarity=0.058  Sum_probs=52.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ...+++|+|+|. |.||+.+++.|...|.+|++..+++.+.......++++.     +   +.++++++|+||.+++
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~-----~---l~eal~~aDVVI~aTG  276 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVM-----T---MEEAAELGDIFVTATG  276 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEec-----C---HHHHHhCCCEEEECCC
Confidence            458999999997 999999999999999999999998877544322233322     2   3466789999999854

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.51  E-value=0.0056  Score=55.74  Aligned_cols=72  Identities=7%  Similarity=-0.038  Sum_probs=51.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcC---CCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG---TYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~---~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+++++|.|+ |+.|+.++..|+..|. +|+++.|+.+++.++..   ....+..  +...+.+...+.++|+||+++
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVInaT  198 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVSTV  198 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEECC
Confidence            45789999997 9999999999999996 79999999887665432   1111111  222233445667899999983

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.51  E-value=0.027  Score=50.25  Aligned_cols=94  Identities=11%  Similarity=0.070  Sum_probs=62.3

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc-------------------hh---h---hcCC--CcEE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------AM---E---SFGT--YVES  146 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~~---~---~~~~--~v~~  146 (294)
                      ..+..++|+|.|+ |++|+++++.|+..|. ++++++.+.-.                   +.   +   ...+  .++.
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~  106 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET  106 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence            4556789999998 9999999999999996 66666554211                   00   0   0122  3344


Q ss_pred             eecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEec
Q 022625          147 MAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLS  191 (294)
Q Consensus       147 v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vS  191 (294)
                      +...++ .+.+.+.++++|+||.+.+.+     +.+++.+.++. +|+.+
T Consensus       107 ~~~~i~-~~~~~~~~~~~DiVi~~~D~~~~r~~ln~~~~~~~ip-~v~~~  154 (245)
T PRK05690        107 INARLD-DDELAALIAGHDLVLDCTDNVATRNQLNRACFAAKKP-LVSGA  154 (245)
T ss_pred             EeccCC-HHHHHHHHhcCCEEEecCCCHHHHHHHHHHHHHhCCE-EEEee
Confidence            444554 456777899999999985533     55667777754 55543

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.50  E-value=0.071  Score=48.20  Aligned_cols=131  Identities=12%  Similarity=0.032  Sum_probs=74.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccch----------------------hh---hcCCCcEEee
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA----------------------ME---SFGTYVESMA  148 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~----------------------~~---~~~~~v~~v~  148 (294)
                      ..+...+|+|.|+ |++|++++..|++.| -++++++.+.-..                      .+   ...+.+++..
T Consensus        26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~  104 (268)
T PRK15116         26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTV  104 (268)
T ss_pred             HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEE
Confidence            4556789999997 899999999999999 4777777553110                      00   0122233322


Q ss_pred             c-CCCCHHHHHHHhc-CCcEEEEcCCch-----HHhhhhhcCCCEEEEecccccc-cCCCC-chhccchhHHHHHHHHHH
Q 022625          149 G-DASNKKFLKTALR-GVRSIICPSEGF-----ISNAGSLKGVQHVILLSQLSVY-RGSGG-IQALMKGNARKLAEQDES  219 (294)
Q Consensus       149 ~-D~~d~~~l~~~l~-~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vSs~~~~-~~~~~-~~~~~~~~~~~~~~~ae~  219 (294)
                      . +..+.+.+.+.+. ++|+||.+.+.+     +.+.|.+.+++ ||.+...+.. +|... .........=.+.+....
T Consensus       105 i~~~i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip-~I~~gGag~k~dp~~~~~~di~~t~~~pla~~~R~  183 (268)
T PRK15116        105 VDDFITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIP-LVTTGGAGGQIDPTQIQVVDLAKTIQDPLAAKLRE  183 (268)
T ss_pred             EecccChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEECCcccCCCCCeEEEEeeecccCChHHHHHHH
Confidence            2 2334566666664 699999985442     56677777754 5544443322 22211 111111111113456667


Q ss_pred             HHHh-CCCC
Q 022625          220 MLMA-SGIP  227 (294)
Q Consensus       220 ~l~~-~gl~  227 (294)
                      .|+. .|++
T Consensus       184 ~lr~~~~~~  192 (268)
T PRK15116        184 RLKSDFGVV  192 (268)
T ss_pred             HHHHhhCCC
Confidence            7776 5664

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.49  E-value=0.011  Score=54.25  Aligned_cols=95  Identities=8%  Similarity=0.099  Sum_probs=67.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHHhcCCcEEEEcCC---
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE---  172 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~---  172 (294)
                      .+++++.|+|+.| +|..-++..-+.|++|+++++...+.++... -+.+++..-..|++.++++.+..|.++|...   
T Consensus       180 ~pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a  258 (360)
T KOG0023|consen  180 GPGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLA  258 (360)
T ss_pred             CCCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeecc
Confidence            3899999999977 9999999888999999999999866555544 3566665555588888887776666666522   


Q ss_pred             -ch---HHhhhhhcCCCEEEEecccc
Q 022625          173 -GF---ISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       173 -~~---~~~~~~~~gv~r~V~vSs~~  194 (294)
                       .-   ....++..  .++|+++-..
T Consensus       259 ~~~~~~~~~~lk~~--Gt~V~vg~p~  282 (360)
T KOG0023|consen  259 EHALEPLLGLLKVN--GTLVLVGLPE  282 (360)
T ss_pred             ccchHHHHHHhhcC--CEEEEEeCcC
Confidence             11   22333333  4788887544

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.46  E-value=0.023  Score=53.76  Aligned_cols=93  Identities=17%  Similarity=0.226  Sum_probs=63.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc-------------------hhh------hcCC--CcEE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------AME------SFGT--YVES  146 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~~~------~~~~--~v~~  146 (294)
                      ..+...+|+|.|+ |++|.+++..|+..|. ++++++.+.-.                   +..      ...+  .++.
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~  115 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA  115 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence            4566789999998 8899999999999996 77777765211                   000      0122  3444


Q ss_pred             eecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEe
Q 022625          147 MAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILL  190 (294)
Q Consensus       147 v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~v  190 (294)
                      +...++ .+.+.++++++|+||.+.+.+     +.++|.+.++. +|+.
T Consensus       116 ~~~~i~-~~~~~~~~~~~DlVid~~Dn~~~r~~in~~~~~~~iP-~v~~  162 (370)
T PRK05600        116 LRERLT-AENAVELLNGVDLVLDGSDSFATKFLVADAAEITGTP-LVWG  162 (370)
T ss_pred             eeeecC-HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEE
Confidence            545554 456778899999999996543     45667777754 4433

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.42  E-value=0.024  Score=51.58  Aligned_cols=95  Identities=17%  Similarity=0.128  Sum_probs=59.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCC-HHHHHHHhcCCcEEEEcCCch-H
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSEGF-I  175 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d-~~~l~~~l~~~d~Vi~~~~~~-~  175 (294)
                      .+.+++|+||+|.+|..+++.+...|.+|+++++++++...........+ .|..+ .+.+.+. .++|+++++.+.. .
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~d~v~~~~g~~~~  239 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYV-IDGSKFSEDVKKL-GGADVVIELVGSPTI  239 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEE-EecHHHHHHHHhc-cCCCEEEECCChHHH
Confidence            56799999999999999999999999999999988766443321122211 12222 1223322 3789999985432 2


Q ss_pred             Hhhhhh-cCCCEEEEecccc
Q 022625          176 SNAGSL-KGVQHVILLSQLS  194 (294)
Q Consensus       176 ~~~~~~-~gv~r~V~vSs~~  194 (294)
                      ..+.+. ..-.++|.++...
T Consensus       240 ~~~~~~~~~~g~~v~~g~~~  259 (332)
T cd08259         240 EESLRSLNKGGRLVLIGNVT  259 (332)
T ss_pred             HHHHHHhhcCCEEEEEcCCC
Confidence            222111 1335788887643

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.41  E-value=0.0073  Score=56.11  Aligned_cols=64  Identities=17%  Similarity=0.118  Sum_probs=44.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-------eEEEEEcCccchhhhcCCCcEEeecCCCCHH-----------HHHHHhc
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRNAMESFGTYVESMAGDASNKK-----------FLKTALR  162 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~-----------~l~~~l~  162 (294)
                      +|.|+||+|.+|+.++..|+.++.       +++++++++....      .+....|+.|..           ...+.++
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~------a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~   74 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV------LEGVVMELMDCAFPLLDGVVPTHDPAVAFT   74 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc------cceeEeehhcccchhcCceeccCChHHHhC
Confidence            589999999999999999987553       5888888654310      112233333332           3357899


Q ss_pred             CCcEEEEc
Q 022625          163 GVRSIICP  170 (294)
Q Consensus       163 ~~d~Vi~~  170 (294)
                      ++|+||++
T Consensus        75 ~aDiVVit   82 (324)
T TIGR01758        75 DVDVAILV   82 (324)
T ss_pred             CCCEEEEc
Confidence            99999998

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.41  E-value=0.013  Score=56.97  Aligned_cols=68  Identities=15%  Similarity=0.071  Sum_probs=52.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+.+++|+|.|. |.||+.+++.|...|++|++..+++.+.......+++++        .+.++++.+|+|+.++
T Consensus       250 ~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~--------~leell~~ADIVI~at  317 (476)
T PTZ00075        250 VMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV--------TLEDVVETADIFVTAT  317 (476)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec--------cHHHHHhcCCEEEECC
Confidence            3568999999997 899999999999999999999888766533222233322        2556788999999884

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.40  E-value=0.022  Score=46.41  Aligned_cols=64  Identities=17%  Similarity=0.233  Sum_probs=46.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccchhhh----------cCCCcEEeecCCCCHHHHHHHhcCCcEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVRSI  167 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~~~~----------~~~~v~~v~~D~~d~~~l~~~l~~~d~V  167 (294)
                      ++|.|+||+|.+|+.++..|...+  .++++++++++++...          ......+...+       .+.++++|+|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-------~~~~~~aDiv   73 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-------YEALKDADIV   73 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-------GGGGTTESEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc-------ccccccccEE
Confidence            589999999999999999999887  4899999987653221          01122222222       3458899999


Q ss_pred             EEc
Q 022625          168 ICP  170 (294)
Q Consensus       168 i~~  170 (294)
                      |.+
T Consensus        74 vit   76 (141)
T PF00056_consen   74 VIT   76 (141)
T ss_dssp             EET
T ss_pred             EEe
Confidence            998

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.40  E-value=0.034  Score=45.01  Aligned_cols=90  Identities=22%  Similarity=0.253  Sum_probs=57.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc-------------------hh---h---hcCC--CcEEeecCCC
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------AM---E---SFGT--YVESMAGDAS  152 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~~---~---~~~~--~v~~v~~D~~  152 (294)
                      +|+|.|+ |++|.++++.|+..|. ++++++.+.-.                   +.   +   ...+  .++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5899998 8999999999999998 67777654210                   00   0   0112  3344444554


Q ss_pred             CHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEeccc
Q 022625          153 NKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       153 d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vSs~  193 (294)
                      + ....+.+.++|+||.+....     +.+.+++.++. ++..++.
T Consensus        80 ~-~~~~~~~~~~diVi~~~d~~~~~~~l~~~~~~~~i~-~i~~~~~  123 (143)
T cd01483          80 E-DNLDDFLDGVDLVIDAIDNIAVRRALNRACKELGIP-VIDAGGL  123 (143)
T ss_pred             h-hhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEcCC
Confidence            3 33467788999999985433     55677777753 5555543

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.39  E-value=0.022  Score=49.40  Aligned_cols=71  Identities=15%  Similarity=0.159  Sum_probs=54.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhhhcC-CCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~-~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      .+.+++|+|.|| |.+|..-++.|++.|++|++++.+... ...... .+++++..++..     ..+.+++.||.+++
T Consensus         6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~-----~dl~~~~lVi~at~   78 (205)
T TIGR01470         6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDA-----DILEGAFLVIAATD   78 (205)
T ss_pred             EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCH-----HHhCCcEEEEECCC
Confidence            467899999998 999999999999999999999876543 222222 368888888763     23688999988844

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK10537 voltage-gated potassium channel; Provisional

Probab=96.38  E-value=0.032  Score=53.18  Aligned_cols=71  Identities=18%  Similarity=0.261  Sum_probs=57.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH-hcCCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~  172 (294)
                      ...++|.|. |.+|+.++++|.++|.+++++..+.  .++..+.+..++.+|.+|++.++++ ++++++|+.+.+
T Consensus       240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~--~~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t~  311 (393)
T PRK10537        240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLG--LEHRLPDDADLIPGDSSDSAVLKKAGAARARAILALRD  311 (393)
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECch--hhhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEcCC
Confidence            467999997 7899999999999999999888663  2333445788999999999988764 678899998743

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.35  E-value=0.023  Score=52.83  Aligned_cols=96  Identities=14%  Similarity=0.134  Sum_probs=61.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHhc--CCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l~--~~d~Vi~~~  171 (294)
                      ..+.+|||+||+|++|...++-+...|+.+++.+.+.++.......+.+.+ .|+.+.   +.+++...  ++|+|+...
T Consensus       141 ~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~v-i~y~~~~~~~~v~~~t~g~gvDvv~D~v  219 (326)
T COG0604         141 KPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHV-INYREEDFVEQVRELTGGKGVDVVLDTV  219 (326)
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEE-EcCCcccHHHHHHHHcCCCCceEEEECC
Confidence            348999999999999999998888899777777776665543222222222 223332   44445554  589999995


Q ss_pred             Cch-HHhhh--hhcCCCEEEEecccc
Q 022625          172 EGF-ISNAG--SLKGVQHVILLSQLS  194 (294)
Q Consensus       172 ~~~-~~~~~--~~~gv~r~V~vSs~~  194 (294)
                      ++. +.+..  ...+ .+++.+....
T Consensus       220 G~~~~~~~l~~l~~~-G~lv~ig~~~  244 (326)
T COG0604         220 GGDTFAASLAALAPG-GRLVSIGALS  244 (326)
T ss_pred             CHHHHHHHHHHhccC-CEEEEEecCC
Confidence            543 33222  2233 6888887655

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.35  E-value=0.015  Score=55.82  Aligned_cols=88  Identities=16%  Similarity=0.083  Sum_probs=60.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC--c
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--G  173 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~--~  173 (294)
                      ...+++|+|.|+ |.||+.+++.+...|.+|+++.+++.++......+++.+     +   +.++++++|+||.+++  .
T Consensus       199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-----~---~~e~v~~aDVVI~atG~~~  269 (413)
T cd00401         199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-----T---MEEAVKEGDIFVTTTGNKD  269 (413)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-----c---HHHHHcCCCEEEECCCCHH
Confidence            457999999997 899999999999999999999998877655443344332     1   2356678999999854  2


Q ss_pred             hHHhh-hhhcC-CCEEEEecc
Q 022625          174 FISNA-GSLKG-VQHVILLSQ  192 (294)
Q Consensus       174 ~~~~~-~~~~g-v~r~V~vSs  192 (294)
                      .+... ....+ -..+++++.
T Consensus       270 ~i~~~~l~~mk~GgilvnvG~  290 (413)
T cd00401         270 IITGEHFEQMKDGAIVCNIGH  290 (413)
T ss_pred             HHHHHHHhcCCCCcEEEEeCC
Confidence            22221 22222 236777773

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PLN02494 adenosylhomocysteinase

Probab=96.34  E-value=0.013  Score=56.86  Aligned_cols=88  Identities=10%  Similarity=0.070  Sum_probs=60.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc--
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG--  173 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~--  173 (294)
                      ...+++|+|.|. |.||+.+++.+...|.+|+++.+++.+.......++.++        .+.++++.+|+||.+++.  
T Consensus       251 ~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv--------~leEal~~ADVVI~tTGt~~  321 (477)
T PLN02494        251 MIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL--------TLEDVVSEADIFVTTTGNKD  321 (477)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec--------cHHHHHhhCCEEEECCCCcc
Confidence            357899999997 899999999999999999999998876444333334432        144577889999988442  


Q ss_pred             hH-HhhhhhcCC-CEEEEecc
Q 022625          174 FI-SNAGSLKGV-QHVILLSQ  192 (294)
Q Consensus       174 ~~-~~~~~~~gv-~r~V~vSs  192 (294)
                      .+ .+.....+. ..+++++.
T Consensus       322 vI~~e~L~~MK~GAiLiNvGr  342 (477)
T PLN02494        322 IIMVDHMRKMKNNAIVCNIGH  342 (477)
T ss_pred             chHHHHHhcCCCCCEEEEcCC
Confidence            22 233332222 35777765

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.32  E-value=0.0039  Score=56.82  Aligned_cols=69  Identities=16%  Similarity=0.170  Sum_probs=50.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcC------CCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG------TYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~------~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      ..+++|+|.|+ |+.|+.++..|+..|. +|+++.|+.+++.....      ....+..  .   +.+.+.+.++|+||+
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~--~---~~~~~~~~~aDiVIn  198 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA--G---SDLAAALAAADGLVH  198 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe--c---cchHhhhCCCCEEEE
Confidence            45689999997 8899999999999997 79999999887654321      1122211  1   223456788999999


Q ss_pred             cC
Q 022625          170 PS  171 (294)
Q Consensus       170 ~~  171 (294)
                      ++
T Consensus       199 aT  200 (284)
T PRK12549        199 AT  200 (284)
T ss_pred             CC
Confidence            83

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.30  E-value=0.018  Score=44.20  Aligned_cols=84  Identities=11%  Similarity=0.210  Sum_probs=55.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCch-
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-  174 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-  174 (294)
                      .+.+++|+|.|+ |.+|..=++.|++.|.+|+++....+...    ..+++..-.+      ++.+++++.||.+++.. 
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~~~~~----~~i~~~~~~~------~~~l~~~~lV~~at~d~~   72 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEIEFSE----GLIQLIRREF------EEDLDGADLVFAATDDPE   72 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSEHHHH----TSCEEEESS-------GGGCTTESEEEE-SS-HH
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCchhhhh----hHHHHHhhhH------HHHHhhheEEEecCCCHH
Confidence            457899999998 99999999999999999999998861111    3455554443      23478899999875432 


Q ss_pred             ----HHhhhhhcCCCEEEEecc
Q 022625          175 ----ISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       175 ----~~~~~~~~gv~r~V~vSs  192 (294)
                          +...+++.++  +|++..
T Consensus        73 ~n~~i~~~a~~~~i--~vn~~D   92 (103)
T PF13241_consen   73 LNEAIYADARARGI--LVNVVD   92 (103)
T ss_dssp             HHHHHHHHHHHTTS--EEEETT
T ss_pred             HHHHHHHHHhhCCE--EEEECC
Confidence                3444555543  666654

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.30  E-value=0.0099  Score=57.09  Aligned_cols=72  Identities=13%  Similarity=0.141  Sum_probs=54.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ...+++|+|.|+ |.+|+.++..|...|. ++++..|+.+++...... +.  .+.+...+.+.+.+..+|+||+++
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~-~~--~~~~~~~~~l~~~l~~aDiVI~aT  250 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSA-FR--NASAHYLSELPQLIKKADIIIAAV  250 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-hc--CCeEecHHHHHHHhccCCEEEECc
Confidence            567899999997 9999999999999995 799999998876544321 10  012233456678899999999993

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.28  E-value=0.011  Score=56.93  Aligned_cols=70  Identities=23%  Similarity=0.242  Sum_probs=52.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+++|+|.|+ |.+|+.+++.|...|+ +|+++.|+++++...... +.   +++.+.+.+.+.+.++|+||.++
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~-~g---~~~~~~~~~~~~l~~aDvVI~aT  250 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE-FG---GEAIPLDELPEALAEADIVISST  250 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH-cC---CcEeeHHHHHHHhccCCEEEECC
Confidence            67899999997 9999999999999997 799999998775433211 10   12233355677788999999983

>PRK07877 hypothetical protein; Provisional

Probab=96.26  E-value=0.03  Score=57.30  Aligned_cols=95  Identities=13%  Similarity=0.190  Sum_probs=67.0

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCccc---h------------------hh---hcCC--CcE
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN---A------------------ME---SFGT--YVE  145 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~~~---~------------------~~---~~~~--~v~  145 (294)
                      ...+...+|+|.|+ | +|+.++.+|+..|.  ++++++.+.-.   +                  .+   ..++  +++
T Consensus       102 Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~  179 (722)
T PRK07877        102 QERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVE  179 (722)
T ss_pred             HHHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEE
Confidence            35677899999999 7 99999999999994  77777664311   0                  00   0122  455


Q ss_pred             EeecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEecc
Q 022625          146 SMAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       146 ~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vSs  192 (294)
                      .+...++ .+.+.+++.++|+||.+.+.+     +.++|.+.++. +|+-++
T Consensus       180 ~~~~~i~-~~n~~~~l~~~DlVvD~~D~~~~R~~ln~~a~~~~iP-~i~~~~  229 (722)
T PRK07877        180 VFTDGLT-EDNVDAFLDGLDVVVEECDSLDVKVLLREAARARRIP-VLMATS  229 (722)
T ss_pred             EEeccCC-HHHHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEcC
Confidence            5666665 678899999999999996654     45667777764 555554

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.25  E-value=0.052  Score=48.55  Aligned_cols=89  Identities=18%  Similarity=0.134  Sum_probs=64.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh--cCCCcEEeecCCCCHHHHHHHhc--CCcEEEEcCCch-
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALR--GVRSIICPSEGF-  174 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~~~-  174 (294)
                      |+|+|.|||+ =|+.++..|.++|+ |++-+-..-.....  ......+..+-+.+.+.+.+.++  +++.||.++..| 
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPfA   78 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPFA   78 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCchH
Confidence            7899999975 79999999999998 65544333222211  11357888888889999999995  789999985544 


Q ss_pred             ------HHhhhhhcCCCEEEEe
Q 022625          175 ------ISNAGSLKGVQHVILL  190 (294)
Q Consensus       175 ------~~~~~~~~gv~r~V~v  190 (294)
                            ..++|++.|+..+-|-
T Consensus        79 ~~is~na~~a~~~~~ipylR~e  100 (249)
T PF02571_consen   79 AEISQNAIEACRELGIPYLRFE  100 (249)
T ss_pred             HHHHHHHHHHHhhcCcceEEEE
Confidence                  4456777777655544

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.25  E-value=0.038  Score=51.88  Aligned_cols=78  Identities=14%  Similarity=0.065  Sum_probs=51.4

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc----CCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~----~~d~Vi~~  170 (294)
                      ....++.|||.||+|++|...++-+...|+..++.+++.++.+-...-+.. ...|+.+++-++...+    ++|+|+.+
T Consensus       154 ~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd-~vvdy~~~~~~e~~kk~~~~~~DvVlD~  232 (347)
T KOG1198|consen  154 KLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGAD-EVVDYKDENVVELIKKYTGKGVDVVLDC  232 (347)
T ss_pred             ccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCc-EeecCCCHHHHHHHHhhcCCCccEEEEC
Confidence            355678999999999999999988888885444445554443221111111 2357777655555544    68999999


Q ss_pred             CCc
Q 022625          171 SEG  173 (294)
Q Consensus       171 ~~~  173 (294)
                      .++
T Consensus       233 vg~  235 (347)
T KOG1198|consen  233 VGG  235 (347)
T ss_pred             CCC
Confidence            443

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.21  E-value=0.011  Score=56.92  Aligned_cols=70  Identities=16%  Similarity=0.132  Sum_probs=52.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchhhhcCC-CcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ...+++|+|.|+ |.+|..+++.|...| .+|+++.|+.+++...... +...     .+.+.+.+.+.++|+||.++
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~-----i~~~~l~~~l~~aDvVi~aT  248 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA-----VKFEDLEEYLAEADIVISST  248 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE-----eeHHHHHHHHhhCCEEEECC
Confidence            467899999997 999999999999999 7899999998775432211 1111     12346677888999999983

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.20  E-value=0.042  Score=50.74  Aligned_cols=90  Identities=17%  Similarity=0.228  Sum_probs=57.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc-------------------h---hh---hcCC--CcEEeecCCC
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------A---ME---SFGT--YVESMAGDAS  152 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~---~~---~~~~--~v~~v~~D~~  152 (294)
                      +|+|.|+ |++|.++++.|+..|. ++.+++.+.-.                   +   .+   ...+  .++.+..++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            5899997 8999999999999997 56665543211                   0   00   0122  3555666777


Q ss_pred             CHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEecc
Q 022625          153 NKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       153 d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vSs  192 (294)
                      +...-.+.++++|+||.+....     +.+.+...++. +|...+
T Consensus        80 ~~~~~~~f~~~~DvVv~a~Dn~~ar~~in~~c~~~~ip-~I~~gt  123 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNALDNLAARRHVNKMCLAADVP-LIESGT  123 (312)
T ss_pred             CccchHHHHhcCCEEEECCCCHHHHHHHHHHHHHCCCC-EEEEec
Confidence            6443457789999999984432     45566666643 444433

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.17  E-value=0.025  Score=46.94  Aligned_cols=71  Identities=13%  Similarity=0.115  Sum_probs=48.9

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ..++.+++|+|.|| |.+|...++.|++.|++|+++..+.  ..+... ..+++..-.+..     ..++++|.||.+++
T Consensus         8 ~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~~--~~~l~~l~~i~~~~~~~~~-----~dl~~a~lViaaT~   79 (157)
T PRK06719          8 MFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPEI--CKEMKELPYITWKQKTFSN-----DDIKDAHLIYAATN   79 (157)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCcc--CHHHHhccCcEEEecccCh-----hcCCCceEEEECCC
Confidence            34678899999998 9999999999999999999885332  222111 234444333332     23678899998854

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.15  E-value=0.0099  Score=57.52  Aligned_cols=66  Identities=15%  Similarity=0.082  Sum_probs=47.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      |+|+|.||.|.+|..+++.|.++|++|+++.|++++..+... .++.     ..  ....+.+.++|+||.+.+
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~-----~~--~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE-----YA--NDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe-----ec--cCHHHHhccCCEEEEecC
Confidence            579999999999999999999999999999998766432211 1221     11  123456778899998733

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.15  E-value=0.011  Score=56.30  Aligned_cols=72  Identities=21%  Similarity=0.213  Sum_probs=59.1

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+.+++++|.|| |-+|.-++++|..+| .+|+++.|+.+++.++... +   .+++...+.+...+..+|+||.++
T Consensus       174 ~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~-~---~~~~~~l~el~~~l~~~DvVissT  246 (414)
T COG0373         174 GSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKK-L---GAEAVALEELLEALAEADVVISST  246 (414)
T ss_pred             cccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHH-h---CCeeecHHHHHHhhhhCCEEEEec
Confidence            3478899999998 899999999999999 6889999999987754321 1   155666778889999999999983

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.15  E-value=0.017  Score=53.97  Aligned_cols=88  Identities=16%  Similarity=0.129  Sum_probs=51.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchhhhcCCCcEE------------eec-CCCCHHHHHHHhcCCc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVES------------MAG-DASNKKFLKTALRGVR  165 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~v~~------------v~~-D~~d~~~l~~~l~~~d  165 (294)
                      ++|.|+||+|++|+++++.|..+. ++++.++++.............+            +.. ++ +.+    .+.++|
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~D   75 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEP-EPV----ASKDVD   75 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeC-CHH----HhccCC
Confidence            479999999999999999998876 68888865443221111110000            000 11 222    347899


Q ss_pred             EEEEcCC-ch---HHhhhhhcCCCEEEEeccc
Q 022625          166 SIICPSE-GF---ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       166 ~Vi~~~~-~~---~~~~~~~~gv~r~V~vSs~  193 (294)
                      +||.+.+ +.   +...+.+.|++ +|-.|+.
T Consensus        76 vVf~a~p~~~s~~~~~~~~~~G~~-VIDlsg~  106 (341)
T TIGR00978        76 IVFSALPSEVAEEVEPKLAEAGKP-VFSNASN  106 (341)
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCE-EEECChh
Confidence            9999843 22   33444556764 5555554

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.15  E-value=0.055  Score=47.93  Aligned_cols=90  Identities=14%  Similarity=0.135  Sum_probs=57.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc-------------------hh---h---hcCC--CcEEeecCCC
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------AM---E---SFGT--YVESMAGDAS  152 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~~---~---~~~~--~v~~v~~D~~  152 (294)
                      +|+|.|+ |++|.++++.|+..|. ++.+++.+.-.                   +.   +   ...+  .++.+..++.
T Consensus         1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            5899996 8999999999999997 66666654311                   00   0   0112  3455666775


Q ss_pred             CHHHH-HHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEecc
Q 022625          153 NKKFL-KTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       153 d~~~l-~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vSs  192 (294)
                      +.+.. ...++++|+||.+.+.+     +.+.+...++. +|..++
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~Dn~~aR~~ln~~c~~~~ip-lI~~g~  124 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNALDNIIARRYVNGMLIFLIVP-LIESGT  124 (234)
T ss_pred             hhhhchHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEcc
Confidence            53332 46789999999985433     45566666643 555544

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.14  E-value=0.017  Score=52.72  Aligned_cols=71  Identities=13%  Similarity=0.235  Sum_probs=49.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcC---CCc--EEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG---TYV--ESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~---~~v--~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+++++|.|| |+.|+.++..|+..|. +|.++.|+.+++.++..   ...  ..+.  ..+...+.+.+..+|+||++
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~~~~~~~~~~~~divINa  201 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDARGIEDVIAAADGVVNA  201 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecCHhHHHHHHhhcCEEEEc
Confidence            45789999997 8999999999999996 78899999887655421   111  1111  12222334455678999998

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.13  E-value=0.019  Score=52.25  Aligned_cols=70  Identities=7%  Similarity=-0.006  Sum_probs=45.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCC----CHHHHHHHhcCCcEEEEcC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS----NKKFLKTALRGVRSIICPS  171 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~----d~~~l~~~l~~~d~Vi~~~  171 (294)
                      |+|+|.|+ |.+|..++..|.+.|++|+++.|+++........++.+-.++..    ...+..+. +.+|+||.+.
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~   74 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAV   74 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEec
Confidence            57999997 99999999999999999999999776544332222221011110    00112233 7789999883

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.13  E-value=0.016  Score=53.76  Aligned_cols=72  Identities=14%  Similarity=0.076  Sum_probs=48.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCC--CcEEeec-----CCCCHHHHHHHhcCCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--YVESMAG-----DASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~--~v~~v~~-----D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      +|+|.|.|+ |.+|..++..|++.|++|+++.|++++.......  +...+.+     .+.-..+..++++.+|+||.+.
T Consensus         4 ~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v   82 (328)
T PRK14618          4 GMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAV   82 (328)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEEC
Confidence            468999996 9999999999999999999999987654332211  0000001     0111123445678899999883

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.13  E-value=0.014  Score=53.94  Aligned_cols=70  Identities=19%  Similarity=0.133  Sum_probs=51.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchhhhcCC-CcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ..+++|+|.|+ |.+|+.+++.|...| .+|+++.|+++++.+.... +.     +..+.+.+.+.+..+|+||.+++
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~-----~~~~~~~~~~~l~~aDvVi~at~  247 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG-----NAVPLDELLELLNEADVVISATG  247 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC-----eEEeHHHHHHHHhcCCEEEECCC
Confidence            46899999997 999999999999876 6888999998765432211 12     22233456777888999999843

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.10  E-value=0.022  Score=49.28  Aligned_cols=72  Identities=7%  Similarity=0.118  Sum_probs=51.5

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhhhcC-CCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~-~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ..+.+++|+|.|| |.+|...++.|++.|++|+++.++..+ +..... ..+.+..-++..     ..+.++|.||.+++
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~-----~~l~~adlViaaT~   79 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEP-----SDIVDAFLVIAATN   79 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCCh-----hhcCCceEEEEcCC
Confidence            3567899999998 999999999999999999999876533 222222 235554443332     34678899988844

>TIGR00936 ahcY adenosylhomocysteinase

Probab=96.09  E-value=0.022  Score=54.52  Aligned_cols=68  Identities=16%  Similarity=0.041  Sum_probs=52.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ...+++|+|.|. |.||+.+++.+...|.+|+++.+++.+.......+++++     +   +.++++++|+||.+++
T Consensus       192 ~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~-----~---leeal~~aDVVItaTG  259 (406)
T TIGR00936       192 LIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVM-----T---MEEAAKIGDIFITATG  259 (406)
T ss_pred             CCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeC-----C---HHHHHhcCCEEEECCC
Confidence            467999999997 999999999999999999999988876544333344332     2   2346788999998854

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.09  E-value=0.029  Score=51.41  Aligned_cols=66  Identities=11%  Similarity=0.039  Sum_probs=49.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      |+|.|.|. |.+|..+++.|++.|++|.+..|++++.......+...    ..+.+.+.+.++.+|+||.+
T Consensus         1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~----~~s~~~~~~~~~~~dvIi~~   66 (298)
T TIGR00872         1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTG----VANLRELSQRLSAPRVVWVM   66 (298)
T ss_pred             CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcc----cCCHHHHHhhcCCCCEEEEE
Confidence            47999996 99999999999999999999999988765543322211    23455555666778888877

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.06  E-value=0.047  Score=49.07  Aligned_cols=96  Identities=15%  Similarity=0.110  Sum_probs=61.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHh--cCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l--~~~d~Vi~~~  171 (294)
                      ..+++++|+|++|.+|..+++.+...|.+|+++++++++.......++..+ .|..+.   ..+.+..  +++|.++++.
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~  221 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAV-FNYRAEDLADRILAATAGQGVDVIIEVL  221 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCcCHHHHHHHHcCCCceEEEEECC
Confidence            357899999999999999999999999999999998766443322222221 233332   3333433  3679999985


Q ss_pred             CchHHhhh-hh-cCCCEEEEeccc
Q 022625          172 EGFISNAG-SL-KGVQHVILLSQL  193 (294)
Q Consensus       172 ~~~~~~~~-~~-~gv~r~V~vSs~  193 (294)
                      ++...... +. ..-.+++.+++.
T Consensus       222 ~~~~~~~~~~~l~~~g~~v~~~~~  245 (325)
T cd08253         222 ANVNLAKDLDVLAPGGRIVVYGSG  245 (325)
T ss_pred             chHHHHHHHHhhCCCCEEEEEeec
Confidence            44322211 11 123578888764

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.05  E-value=0.052  Score=46.73  Aligned_cols=95  Identities=11%  Similarity=0.072  Sum_probs=61.3

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc--------------------------hhhhcCC--CcE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN--------------------------AMESFGT--YVE  145 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~--------------------------~~~~~~~--~v~  145 (294)
                      ..+..++|+|.|+ |++|.++++.|+..|. ++++++.+.-.                          +.+ ..+  .++
T Consensus        17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~-lNp~v~i~   94 (197)
T cd01492          17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRA-LNPRVKVS   94 (197)
T ss_pred             HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHH-HCCCCEEE
Confidence            4556789999997 5699999999999997 46666543210                          111 122  344


Q ss_pred             EeecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEecccc
Q 022625          146 SMAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       146 ~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vSs~~  194 (294)
                      .....+++  ...+.++++|+||.+...+     +.+.|++.++. +|+.++.+
T Consensus        95 ~~~~~~~~--~~~~~~~~~dvVi~~~~~~~~~~~ln~~c~~~~ip-~i~~~~~G  145 (197)
T cd01492          95 VDTDDISE--KPEEFFSQFDVVVATELSRAELVKINELCRKLGVK-FYATGVHG  145 (197)
T ss_pred             EEecCccc--cHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence            44444542  2356788999999884432     55677888864 56665543

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.04  E-value=0.012  Score=54.16  Aligned_cols=73  Identities=14%  Similarity=0.108  Sum_probs=48.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEe-------ecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM-------AGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v-------~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ||+|.|.|+ |.+|..++..|++.|++|.++.|+++.............       ...+....+..+.++++|+||.+.
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v   79 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAV   79 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeC
Confidence            468999996 999999999999999999999998766443221110000       001111123445678899999883


Q ss_pred             C
Q 022625          172 E  172 (294)
Q Consensus       172 ~  172 (294)
                      .
T Consensus        80 ~   80 (325)
T PRK00094         80 P   80 (325)
T ss_pred             C
Confidence            3

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.03  E-value=0.068  Score=49.29  Aligned_cols=94  Identities=14%  Similarity=0.090  Sum_probs=58.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcC-CCcEEeecCCC--C-HHHHHHHh-cCCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG-TYVESMAGDAS--N-KKFLKTAL-RGVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~-~~v~~v~~D~~--d-~~~l~~~l-~~~d~Vi~~~~  172 (294)
                      +.+|+|+||+|.+|..+++.+...|. +|+++++++++...... -+.+.+ .|..  + .+.+.+.. +++|++|.+.+
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~v-i~~~~~~~~~~i~~~~~~gvd~vid~~g  233 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAA-INYKTDNVAERLRELCPEGVDVYFDNVG  233 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEE-EECCCCCHHHHHHHHCCCCceEEEECCC
Confidence            38999999999999999988888898 79999988876543211 122222 1222  2 23333332 46899998854


Q ss_pred             ch-HHhhhhh-cCCCEEEEeccc
Q 022625          173 GF-ISNAGSL-KGVQHVILLSQL  193 (294)
Q Consensus       173 ~~-~~~~~~~-~gv~r~V~vSs~  193 (294)
                      +. ...+... ..-.++|.++..
T Consensus       234 ~~~~~~~~~~l~~~G~iv~~G~~  256 (345)
T cd08293         234 GEISDTVISQMNENSHIILCGQI  256 (345)
T ss_pred             cHHHHHHHHHhccCCEEEEEeee
Confidence            32 2222211 123578887643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.01  E-value=0.023  Score=52.53  Aligned_cols=65  Identities=15%  Similarity=0.140  Sum_probs=50.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      .+.+++|.|.|- |.||+.+++.|...|++|++..|..++..     ++..+    ....++.++++++|+|+.+
T Consensus       133 ~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~----~~~~~l~e~l~~aDvvv~~  197 (312)
T PRK15469        133 HREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSF----AGREELSAFLSQTRVLINL  197 (312)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceee----cccccHHHHHhcCCEEEEC
Confidence            456899999996 99999999999999999999988654321     12211    1345788999999999987

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.01  E-value=0.027  Score=42.12  Aligned_cols=71  Identities=11%  Similarity=0.160  Sum_probs=47.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC---CeEEEE-EcCccchhhhcCC-CcEEeecCCCCHHHHHHHhcCCcEEEEc-CCch
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKR---TRIKAL-VKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP-SEGF  174 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g---~~V~~~-~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~-~~~~  174 (294)
                      +|.|.|+ |.+|..+++.|++.|   ++|..+ .|++++..+.... .+.+...   +   ..++++.+|+||.+ .+..
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~---~---~~~~~~~advvilav~p~~   73 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD---D---NEEAAQEADVVILAVKPQQ   73 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE---E---HHHHHHHTSEEEE-S-GGG
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC---C---hHHhhccCCEEEEEECHHH
Confidence            5778864 999999999999999   999966 8999876654321 2222221   2   34566689999998 3333


Q ss_pred             HHhh
Q 022625          175 ISNA  178 (294)
Q Consensus       175 ~~~~  178 (294)
                      +.+.
T Consensus        74 ~~~v   77 (96)
T PF03807_consen   74 LPEV   77 (96)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            3333

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.01  E-value=0.066  Score=45.16  Aligned_cols=87  Identities=10%  Similarity=0.085  Sum_probs=56.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCc---cch---------------hh------hcCC--CcEEeecCCCC
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK---RNA---------------ME------SFGT--YVESMAGDASN  153 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~---~~~---------------~~------~~~~--~v~~v~~D~~d  153 (294)
                      +|+|.|+ |++|.++++.|++.|. ++++++.+.   +.+               ..      ...+  .++.+...++.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            5899997 8999999999999998 588888764   110               00      1122  33344444443


Q ss_pred             HHHHHHHhcCCcEEEEcCCch-----HHhhhhhc-CCCEEEEe
Q 022625          154 KKFLKTALRGVRSIICPSEGF-----ISNAGSLK-GVQHVILL  190 (294)
Q Consensus       154 ~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~-gv~r~V~v  190 (294)
                       +.+.+.++++|+||.+.+.+     +.+.+.+. ++ -||+.
T Consensus        80 -~~~~~~l~~~DlVi~~~d~~~~r~~i~~~~~~~~~i-p~i~~  120 (174)
T cd01487          80 -NNLEGLFGDCDIVVEAFDNAETKAMLAESLLGNKNK-PVVCA  120 (174)
T ss_pred             -hhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHCCC-CEEEE
Confidence             56778899999999985443     33444444 54 34444

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.00  E-value=0.027  Score=52.04  Aligned_cols=81  Identities=14%  Similarity=0.083  Sum_probs=57.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCC--CcEEee-----cCCCCHHHHHHHhcCCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--YVESMA-----GDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~--~v~~v~-----~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      +++|.|.|| |.=|..|+.-|++.|++|++..|+++...+....  +.+.+.     -++.-...+.++++++|+|+.+.
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~av   79 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAV   79 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEEC
Confidence            378999997 8999999999999999999999998765554321  222222     23333456788999999999884


Q ss_pred             C-chHHhhhh
Q 022625          172 E-GFISNAGS  180 (294)
Q Consensus       172 ~-~~~~~~~~  180 (294)
                      + ..+.+.++
T Consensus        80 Ps~~~r~v~~   89 (329)
T COG0240          80 PSQALREVLR   89 (329)
T ss_pred             ChHHHHHHHH
Confidence            3 33434333

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=95.99  E-value=0.0065  Score=50.29  Aligned_cols=71  Identities=14%  Similarity=0.098  Sum_probs=47.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--------CCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--------TYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--------~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      +|.|.|| |..|..++..|..+|++|.+..|+++.......        ++++.- ..+.-...++++++++|+||.+.+
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~-~~i~~t~dl~~a~~~ad~IiiavP   78 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLP-ENIKATTDLEEALEDADIIIIAVP   78 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEE-TTEEEESSHHHHHTT-SEEEE-S-
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccC-cccccccCHHHHhCcccEEEeccc
Confidence            6899997 999999999999999999999999865433211        111111 111111345678899999999854


Q ss_pred             c
Q 022625          173 G  173 (294)
Q Consensus       173 ~  173 (294)
                      .
T Consensus        79 s   79 (157)
T PF01210_consen   79 S   79 (157)
T ss_dssp             G
T ss_pred             H
Confidence            3

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PLN02928 oxidoreductase family protein

Probab=95.96  E-value=0.022  Score=53.45  Aligned_cols=75  Identities=9%  Similarity=0.018  Sum_probs=52.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cC-CCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG-TYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~-~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+.++++.|.|. |.||+.+++.|...|.+|++..|...+....   .+ ..+..+........++.++++.+|+|+..
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~  233 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC  233 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence            3577899999996 9999999999999999999998864321111   00 01111111111345688999999999987

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=95.94  E-value=0.061  Score=50.21  Aligned_cols=96  Identities=13%  Similarity=0.034  Sum_probs=59.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-CCCcEEeecCCC---CH-HHHHHHh-cCCcEEEEc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDAS---NK-KFLKTAL-RGVRSIICP  170 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~---d~-~~l~~~l-~~~d~Vi~~  170 (294)
                      .++.+|+|+||+|.+|..+++.+...|.+|+++++++++..... .-+.+.+. |..   +. +.+.+.. .++|++|.+
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi-~~~~~~~~~~~i~~~~~~gvD~v~d~  235 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAF-NYKEEPDLDAALKRYFPEGIDIYFDN  235 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEE-ECCCcccHHHHHHHHCCCCcEEEEEC
Confidence            35789999999999999999888889999999888877654322 12232222 222   21 2233322 368999998


Q ss_pred             CCchHH-hhhhh-cCCCEEEEeccc
Q 022625          171 SEGFIS-NAGSL-KGVQHVILLSQL  193 (294)
Q Consensus       171 ~~~~~~-~~~~~-~gv~r~V~vSs~  193 (294)
                      .++... .+... ..-.++|.++..
T Consensus       236 vG~~~~~~~~~~l~~~G~iv~~G~~  260 (348)
T PLN03154        236 VGGDMLDAALLNMKIHGRIAVCGMV  260 (348)
T ss_pred             CCHHHHHHHHHHhccCCEEEEECcc
Confidence            554322 22111 123578887654

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.94  E-value=0.042  Score=53.04  Aligned_cols=68  Identities=12%  Similarity=-0.004  Sum_probs=46.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch----hhhcCCCcEEeecCCCCHHHHHHHhc-CCcEEEEc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTALR-GVRSIICP  170 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~----~~~~~~~v~~v~~D~~d~~~l~~~l~-~~d~Vi~~  170 (294)
                      ..+++|+|||+++ +|...++.|++.|++|++..++....    ..+...++++..++..  ..   .+. ++|.||+.
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~--~~---~~~~~~d~vV~s   75 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHP--LE---LLDEDFDLMVKN   75 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCC--HH---HhcCcCCEEEEC
Confidence            3578999999965 99999999999999999988765321    1122235565544322  11   233 48988886

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=95.91  E-value=0.044  Score=51.95  Aligned_cols=70  Identities=11%  Similarity=0.116  Sum_probs=54.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP  170 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~  170 (294)
                      ..|+|+|+|+ |..|+.++..+.+.|++|+++..++.........  ..+..|..|.+.+.++++  ++|+|+..
T Consensus        11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~ad--~~~~~~~~d~~~l~~~~~~~~id~vi~~   82 (395)
T PRK09288         11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAH--RSHVIDMLDGDALRAVIEREKPDYIVPE   82 (395)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhhh--heEECCCCCHHHHHHHHHHhCCCEEEEe
Confidence            4579999996 7899999999999999999998877542211211  346678889988888887  78988875

>PRK07411 hypothetical protein; Validated

Probab=95.90  E-value=0.058  Score=51.46  Aligned_cols=93  Identities=15%  Similarity=0.130  Sum_probs=61.1

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc-------------------h---hh---hcCC--CcEE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------A---ME---SFGT--YVES  146 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~---~~---~~~~--~v~~  146 (294)
                      ..+...+|+|.|+ |++|.++++.|+..|. ++++++.+.-.                   +   .+   ...+  .++.
T Consensus        34 ~~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~  112 (390)
T PRK07411         34 KRLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDL  112 (390)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEE
Confidence            4567789999998 8899999999999997 55555543211                   0   00   0122  3455


Q ss_pred             eecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEe
Q 022625          147 MAGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILL  190 (294)
Q Consensus       147 v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~v  190 (294)
                      +...++. +...+.+.++|+||.+.+.+     +.++|.+.++. +|+.
T Consensus       113 ~~~~~~~-~~~~~~~~~~D~Vvd~~d~~~~r~~ln~~~~~~~~p-~v~~  159 (390)
T PRK07411        113 YETRLSS-ENALDILAPYDVVVDGTDNFPTRYLVNDACVLLNKP-NVYG  159 (390)
T ss_pred             EecccCH-HhHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEE
Confidence            5555554 45677899999999996543     45667766643 4443

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=95.86  E-value=0.022  Score=54.02  Aligned_cols=36  Identities=17%  Similarity=0.386  Sum_probs=32.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK  133 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~  133 (294)
                      ..++|.|.||.|.+|..+++.|.++|++|+++.|+.
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            458999999999999999999999999999998853

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=95.76  E-value=0.035  Score=50.74  Aligned_cols=74  Identities=8%  Similarity=0.080  Sum_probs=49.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCcc---chhhh---cCCC--cEEeecCCCCHHHHHHHhcCCcE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---NAMES---FGTY--VESMAGDASNKKFLKTALRGVRS  166 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~---~~~~~---~~~~--v~~v~~D~~d~~~l~~~l~~~d~  166 (294)
                      ...+++++|.|| |+.++.++..|+..|. +|.++.|+++   ++..+   ++..  ..+...++.+.+.+.+.+.++|+
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDi  199 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI  199 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCE
Confidence            346789999997 7789999999999986 8999999853   43332   2111  11112233333335556778999


Q ss_pred             EEEc
Q 022625          167 IICP  170 (294)
Q Consensus       167 Vi~~  170 (294)
                      ||++
T Consensus       200 vINa  203 (288)
T PRK12749        200 LTNG  203 (288)
T ss_pred             EEEC
Confidence            9998

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=95.75  E-value=0.1  Score=47.38  Aligned_cols=96  Identities=13%  Similarity=0.087  Sum_probs=61.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHH---HHHHh--cCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKF---LKTAL--RGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~---l~~~l--~~~d~Vi~~~  171 (294)
                      ..+.+++|+|+++.+|..+++.+...|++|+++++++++.......+... ..|..+.+.   +.+..  .++|.++++.
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~  243 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADY-VIDYRKEDFVREVRELTGKRGVDVVVEHV  243 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCe-EEecCChHHHHHHHHHhCCCCCcEEEECC
Confidence            35789999999999999999999999999999998876544322112221 234444333   22323  2579999985


Q ss_pred             CchH----HhhhhhcCCCEEEEeccccc
Q 022625          172 EGFI----SNAGSLKGVQHVILLSQLSV  195 (294)
Q Consensus       172 ~~~~----~~~~~~~gv~r~V~vSs~~~  195 (294)
                      ++..    .+.+..  -.+++.+++...
T Consensus       244 g~~~~~~~~~~l~~--~G~~v~~~~~~~  269 (342)
T cd08266         244 GAATWEKSLKSLAR--GGRLVTCGATTG  269 (342)
T ss_pred             cHHHHHHHHHHhhc--CCEEEEEecCCC
Confidence            4321    122222  258998876643

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=95.74  E-value=0.11  Score=47.47  Aligned_cols=66  Identities=9%  Similarity=-0.022  Sum_probs=47.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      |+|.|.|. |.+|..+++.|++.|++|.+..|++++.......++..    ..+.+.+.+.+++.|+||.+
T Consensus         1 m~Ig~IGl-G~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~----~~~~~e~~~~~~~~dvvi~~   66 (301)
T PRK09599          1 MQLGMIGL-GRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATG----ADSLEELVAKLPAPRVVWLM   66 (301)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCee----cCCHHHHHhhcCCCCEEEEE
Confidence            47899985 99999999999999999999999987765543333321    22444443334456888877

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=95.74  E-value=1  Score=37.73  Aligned_cols=178  Identities=14%  Similarity=0.177  Sum_probs=91.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHH-------HHHHHhc--CCcEEEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK-------FLKTALR--GVRSIIC  169 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~-------~l~~~l~--~~d~Vi~  169 (294)
                      ..+|+|.|+-|-+|+.+++.+-+++|-|.-++-.+....    +.-.++.+|-+--+       ++.+.+.  .+|+|||
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A----d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~C   78 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA----DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFC   78 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc----cceEEecCCcchhHHHHHHHHHHHHhhcccccceEEE
Confidence            468999999999999999999999998887765543211    11122333332222       2223333  4699999


Q ss_pred             cCCch----------H--Hh---------------hh-hhcCCCEEEEecc-cccccCCCCchhccchhHHHHHHHHHHH
Q 022625          170 PSEGF----------I--SN---------------AG-SLKGVQHVILLSQ-LSVYRGSGGIQALMKGNARKLAEQDESM  220 (294)
Q Consensus       170 ~~~~~----------~--~~---------------~~-~~~gv~r~V~vSs-~~~~~~~~~~~~~~~~~~~~~~~~ae~~  220 (294)
                      .++|+          +  ++               ++ +..+..-+.-+.. ..+..+.+++..|.-.+.  .....-.-
T Consensus        79 VAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgMIGYGMAKa--AVHqLt~S  156 (236)
T KOG4022|consen   79 VAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGMIGYGMAKA--AVHQLTSS  156 (236)
T ss_pred             eeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcccchhHHHH--HHHHHHHH
Confidence            84432          0  00               11 1122223333333 333445555555532221  11111111


Q ss_pred             H--HhCCCCE----EEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          221 L--MASGIPY----TIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       221 l--~~~gl~~----tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      |  +.+|+|-    ..|-|--+ |.|-.   ..+.......+|.+.+-+++.+..-....+  ..|....+...
T Consensus       157 Laak~SGlP~gsaa~~ilPVTL-DTPMN---RKwMP~ADfssWTPL~fi~e~flkWtt~~~RPssGsLlqi~Tt  226 (236)
T KOG4022|consen  157 LAAKDSGLPDGSAALTILPVTL-DTPMN---RKWMPNADFSSWTPLSFISEHFLKWTTETSRPSSGSLLQITTT  226 (236)
T ss_pred             hcccccCCCCCceeEEEeeeec-cCccc---cccCCCCcccCcccHHHHHHHHHHHhccCCCCCCCceEEEEec
Confidence            1  2367762    22223222 23322   123344455678899999998887665433  34656665543

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.74  E-value=0.057  Score=50.96  Aligned_cols=91  Identities=16%  Similarity=0.085  Sum_probs=51.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHH-CCCe---EEEEEcCccchh-hhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIV-KRTR---IKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~-~g~~---V~~~~R~~~~~~-~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~  173 (294)
                      |++|.|.||||.+|+++++.|++ +.+.   ++.+........ ..+.. -.....++.+.+.    +.++|++|.+.++
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g-~~~~v~~~~~~~~----~~~~Divf~a~~~   75 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGG-KEGTLQDAFDIDA----LKKLDIIITCQGG   75 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCC-CcceEEecCChhH----hcCCCEEEECCCH
Confidence            36899999999999999985554 5565   665444311110 01211 1223334444332    4789999998443


Q ss_pred             h----HHhhhhhcCCC-EEEEecccc
Q 022625          174 F----ISNAGSLKGVQ-HVILLSQLS  194 (294)
Q Consensus       174 ~----~~~~~~~~gv~-r~V~vSs~~  194 (294)
                      -    +...+.+.|.+ .+|=.|+..
T Consensus        76 ~~s~~~~~~~~~aG~~~~VID~Ss~f  101 (369)
T PRK06598         76 DYTNEVYPKLRAAGWQGYWIDAASTL  101 (369)
T ss_pred             HHHHHHHHHHHhCCCCeEEEECChHH
Confidence            2    33334456664 355555543

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.74  E-value=0.066  Score=48.85  Aligned_cols=96  Identities=15%  Similarity=0.111  Sum_probs=60.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHh-cCCcEEEEcCC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPSE  172 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l-~~~d~Vi~~~~  172 (294)
                      .++.+|+|+||+|.+|..+++.+...|.+|+++++++++......-+++.+ .|..+.   +.+.+.. .++|+++.+.+
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~~g  220 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAV-FNYKTVSLEEALKEAAPDGIDCYFDNVG  220 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence            357899999999999999998888899999999988876544322233222 233322   2333332 36899998855


Q ss_pred             chH-Hhhhhh-cCCCEEEEeccc
Q 022625          173 GFI-SNAGSL-KGVQHVILLSQL  193 (294)
Q Consensus       173 ~~~-~~~~~~-~gv~r~V~vSs~  193 (294)
                      +.. ...... ..-.+|+.++..
T Consensus       221 ~~~~~~~~~~l~~~G~iv~~g~~  243 (329)
T cd08294         221 GEFSSTVLSHMNDFGRVAVCGSI  243 (329)
T ss_pred             HHHHHHHHHhhccCCEEEEEcch
Confidence            432 222211 123578887654

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.71  E-value=0.031  Score=50.92  Aligned_cols=56  Identities=13%  Similarity=0.135  Sum_probs=44.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ....+|+|+|.|++|.+|+.++..|+++|.+|+++.|..                     ..+.+.++++|+||+++
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t---------------------~~L~~~~~~aDIvI~At  210 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT---------------------QNLPELVKQADIIVGAV  210 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc---------------------hhHHHHhccCCEEEEcc
Confidence            467899999999988899999999999999888876632                     22444557788888874

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.71  E-value=0.048  Score=50.62  Aligned_cols=93  Identities=12%  Similarity=0.026  Sum_probs=55.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccc---hhhhcCC--CcEEeecCCCCHHHHHHHhcCCcEEEEcC-
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN---AMESFGT--YVESMAGDASNKKFLKTALRGVRSIICPS-  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~---~~~~~~~--~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~-  171 (294)
                      +++|.|.||+|+.|.+|++.|+.+- .++..++....+   ..+.++.  +..-.....-|.+.+  ..+++|+||.+. 
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFlalP   79 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLALP   79 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhh--hcccCCEEEEecC
Confidence            6799999999999999999999875 476665544322   2222221  111122222233333  466799999983 


Q ss_pred             CchH---HhhhhhcCCCEEEEecccc
Q 022625          172 EGFI---SNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       172 ~~~~---~~~~~~~gv~r~V~vSs~~  194 (294)
                      .+.-   .......|++ +|=+|.+.
T Consensus        80 hg~s~~~v~~l~~~g~~-VIDLSadf  104 (349)
T COG0002          80 HGVSAELVPELLEAGCK-VIDLSADF  104 (349)
T ss_pred             chhHHHHHHHHHhCCCe-EEECCccc
Confidence            3332   2223344554 88888753

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.71  E-value=0.02  Score=52.08  Aligned_cols=70  Identities=19%  Similarity=0.226  Sum_probs=48.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhh---cCCCc-EEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGTYV-ESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---~~~~v-~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ...+++++|.|| |+.++.++.+|++.|. +|+++.|+.+++.++   ++... .+...++.+.+...    .+|.+||+
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~----~~dliINa  197 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE----EADLLINA  197 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc----ccCEEEEC
Confidence            446799999997 8899999999999995 899999999886654   33211 11112222222111    68999998

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.71  E-value=0.015  Score=52.88  Aligned_cols=70  Identities=13%  Similarity=0.077  Sum_probs=48.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-------CCcEE----------eecCCCCHHHHHHHhc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-------TYVES----------MAGDASNKKFLKTALR  162 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-------~~v~~----------v~~D~~d~~~l~~~l~  162 (294)
                      ++|.|.|+ |.+|..++..|+++|++|++++++++.......       ..++.          ....++-..++.++++
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~   80 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA   80 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence            57999998 999999999999999999999999876543211       01100          0001111134567788


Q ss_pred             CCcEEEEc
Q 022625          163 GVRSIICP  170 (294)
Q Consensus       163 ~~d~Vi~~  170 (294)
                      ++|+||.+
T Consensus        81 ~aD~Vi~a   88 (288)
T PRK09260         81 DADLVIEA   88 (288)
T ss_pred             CCCEEEEe
Confidence            99999987

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=95.71  E-value=0.037  Score=50.41  Aligned_cols=69  Identities=13%  Similarity=0.014  Sum_probs=44.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeec--CC----CCHHHHHHHhcCCcEEEEc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAG--DA----SNKKFLKTALRGVRSIICP  170 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~--D~----~d~~~l~~~l~~~d~Vi~~  170 (294)
                      |+|+|.|+ |.+|..++..|.+.|++|.++.| +++.......++.+...  +.    .-.....+..+.+|+||.+
T Consensus         1 mkI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vila   75 (305)
T PRK12921          1 MRIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILA   75 (305)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEE
Confidence            57999997 99999999999999999999999 55433322222222111  10    0001123345778998887

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.69  E-value=0.028  Score=51.68  Aligned_cols=35  Identities=6%  Similarity=0.102  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR  134 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~  134 (294)
                      +|+|.|.|+ |.+|..+++.|.+.|++|++..|+..
T Consensus         4 ~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~   38 (308)
T PRK14619          4 PKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG   38 (308)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            578999986 99999999999999999999999763

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.69  E-value=0.093  Score=48.88  Aligned_cols=94  Identities=16%  Similarity=0.045  Sum_probs=56.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC---ccchhhhcCCCcEEeecCCCCHHHH-HHHhcCCcEEEEcCCc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD---KRNAMESFGTYVESMAGDASNKKFL-KTALRGVRSIICPSEG  173 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~---~~~~~~~~~~~v~~v~~D~~d~~~l-~~~l~~~d~Vi~~~~~  173 (294)
                      .+.+|+|+|+ |.+|...++.+...|.+|++++|+   +++......-+.+.+  |..+.+.. .....++|+||.+.++
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v--~~~~~~~~~~~~~~~~d~vid~~g~  248 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV--NSSKTPVAEVKLVGEFDLIIEATGV  248 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe--cCCccchhhhhhcCCCCEEEECcCC
Confidence            6789999996 999999998888889999999983   444332222234433  33221100 1223578999999543


Q ss_pred             --hHHhhhhhc-CCCEEEEecccc
Q 022625          174 --FISNAGSLK-GVQHVILLSQLS  194 (294)
Q Consensus       174 --~~~~~~~~~-gv~r~V~vSs~~  194 (294)
                        .+..+.... .-.+++.++...
T Consensus       249 ~~~~~~~~~~l~~~G~~v~~G~~~  272 (355)
T cd08230         249 PPLAFEALPALAPNGVVILFGVPG  272 (355)
T ss_pred             HHHHHHHHHHccCCcEEEEEecCC
Confidence              222222211 124788776543

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK14852 hypothetical protein; Provisional

Probab=95.67  E-value=0.082  Score=55.51  Aligned_cols=95  Identities=15%  Similarity=0.130  Sum_probs=62.9

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCcc-------------------ch---hh---hcCC--CcEE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------NA---ME---SFGT--YVES  146 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~-------------------~~---~~---~~~~--~v~~  146 (294)
                      ..+...+|+|.|+ |++|..++..|+..|. ++++++.+.-                   |+   .+   ..++  +++.
T Consensus       328 ~kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~  406 (989)
T PRK14852        328 RRLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRS  406 (989)
T ss_pred             HHHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEE
Confidence            4667889999997 8899999999999996 5555544321                   00   00   1223  3444


Q ss_pred             eecCCCCHHHHHHHhcCCcEEEEcCCc-------hHHhhhhhcCCCEEEEecc
Q 022625          147 MAGDASNKKFLKTALRGVRSIICPSEG-------FISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       147 v~~D~~d~~~l~~~l~~~d~Vi~~~~~-------~~~~~~~~~gv~r~V~vSs  192 (294)
                      +...+ +.+.+.++++++|+||.+.+.       .+.+.|.+.++. +|+.+.
T Consensus       407 ~~~~I-~~en~~~fl~~~DiVVDa~D~~~~~~rr~l~~~c~~~~IP-~I~ag~  457 (989)
T PRK14852        407 FPEGV-AAETIDAFLKDVDLLVDGIDFFALDIRRRLFNRALELGIP-VITAGP  457 (989)
T ss_pred             EecCC-CHHHHHHHhhCCCEEEECCCCccHHHHHHHHHHHHHcCCC-EEEeec
Confidence            54555 457788899999999998543       244556777764 555444

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=95.64  E-value=0.05  Score=50.87  Aligned_cols=68  Identities=13%  Similarity=0.160  Sum_probs=56.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      +++|.|.|+ |.+|+.++..-...|++|+++.-+++.-.....  -.++..+.+|.+.++++.+.+|+|-+
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va--~~~i~~~~dD~~al~ela~~~DViT~   68 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQVA--DRVIVAAYDDPEALRELAAKCDVITY   68 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc--cceeecCCCCHHHHHHHHhhCCEEEE
Confidence            579999997 999999999999999999999877654332222  35677888899999999999999886

>PLN00203 glutamyl-tRNA reductase

Probab=95.64  E-value=0.023  Score=56.11  Aligned_cols=71  Identities=13%  Similarity=0.183  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCC--CcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGT--YVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~--~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+++|+|.|+ |.+|+.+++.|...|. +|+++.|+.+++......  +..+.   +...+.+.+++.++|+||.++
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~---~~~~~dl~~al~~aDVVIsAT  337 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII---YKPLDEMLACAAEADVVFTST  337 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE---eecHhhHHHHHhcCCEEEEcc
Confidence            56899999998 9999999999999996 799999998876543321  22221   223345567788999999983

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.62  E-value=0.25  Score=47.66  Aligned_cols=82  Identities=13%  Similarity=0.086  Sum_probs=49.7

Q ss_pred             EEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCC---HHHHHHHhcCCcEEEEcCCchHHhhhh
Q 022625          104 VTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTALRGVRSIICPSEGFISNAGS  180 (294)
Q Consensus       104 VtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d---~~~l~~~l~~~d~Vi~~~~~~~~~~~~  180 (294)
                      |+||+|.+|..+++.|...|++|+...+.+.+........+.-+..|.+.   .+.+....+           ++...++
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~-----------~~~~~l~  111 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLKALYE-----------FFHPVLR  111 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCCHHHHHHHHH-----------HHHHHHH
Confidence            77888999999999999999999987766653322222345545556544   333332221           1111122


Q ss_pred             h-cCCCEEEEecccccc
Q 022625          181 L-KGVQHVILLSQLSVY  196 (294)
Q Consensus       181 ~-~gv~r~V~vSs~~~~  196 (294)
                      . ..-.|||++++....
T Consensus       112 ~l~~~griv~i~s~~~~  128 (450)
T PRK08261        112 SLAPCGRVVVLGRPPEA  128 (450)
T ss_pred             hccCCCEEEEEcccccc
Confidence            1 123589999987654

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=95.59  E-value=0.044  Score=50.72  Aligned_cols=67  Identities=12%  Similarity=-0.017  Sum_probs=49.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+.+|+|.|.|- |.+|+.+++.|...|++|++..|...........++++        .++.++++.+|+|+..
T Consensus        12 ~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v--------~sl~Eaak~ADVV~ll   78 (335)
T PRK13403         12 ELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEV--------MSVSEAVRTAQVVQML   78 (335)
T ss_pred             hhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEE--------CCHHHHHhcCCEEEEe
Confidence            5678999999996 99999999999999999999877533222111123322        1467888899999977

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.59  E-value=0.05  Score=49.57  Aligned_cols=55  Identities=18%  Similarity=0.191  Sum_probs=47.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+.+++|+|.|+++.+|+.++..|.++|.+|+++.+..                     ..+.+.++.+|+||.+
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t---------------------~~l~~~~~~ADIVIsA  208 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS---------------------KDMASYLKDADVIVSA  208 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHHhhCCEEEEC
Confidence            367899999999999999999999999999999876532                     2466788899999998

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=95.55  E-value=0.0085  Score=51.12  Aligned_cols=40  Identities=13%  Similarity=0.037  Sum_probs=31.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF  140 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~  140 (294)
                      |+|.|.|. |++|..++..|++.|++|++++.++++.....
T Consensus         1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~   40 (185)
T PF03721_consen    1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDEEKVEALN   40 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHH
T ss_pred             CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCChHHHHHHh
Confidence            68999985 99999999999999999999999998765543

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.54  E-value=0.067  Score=49.64  Aligned_cols=71  Identities=6%  Similarity=-0.074  Sum_probs=48.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-----------CCCcE--EeecCCCCHHHHHHHhcCCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----------GTYVE--SMAGDASNKKFLKTALRGVR  165 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----------~~~v~--~v~~D~~d~~~l~~~l~~~d  165 (294)
                      -++|.|.|+ |-+|..++..++..|++|++.+++++......           ..+..  .....++-..++++++.++|
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD   85 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD   85 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence            378999997 99999999999999999999999876432210           00100  00011111234667889999


Q ss_pred             EEEEc
Q 022625          166 SIICP  170 (294)
Q Consensus       166 ~Vi~~  170 (294)
                      .|+-+
T Consensus        86 lViEa   90 (321)
T PRK07066         86 FIQES   90 (321)
T ss_pred             EEEEC
Confidence            99988

>PRK07574 formate dehydrogenase; Provisional

Probab=95.54  E-value=0.04  Score=52.44  Aligned_cols=68  Identities=7%  Similarity=-0.047  Sum_probs=50.2

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+.+|+|.|.|. |.||+.+++.|...|++|+...|...........+       +.-..+++++++.+|+|+.+
T Consensus       188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g-------~~~~~~l~ell~~aDvV~l~  255 (385)
T PRK07574        188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELG-------LTYHVSFDSLVSVCDVVTIH  255 (385)
T ss_pred             eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcC-------ceecCCHHHHhhcCCEEEEc
Confidence            3578899999996 99999999999999999999988763221111111       21123477889999999976

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=95.52  E-value=0.11  Score=52.00  Aligned_cols=74  Identities=12%  Similarity=0.158  Sum_probs=57.7

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      .....+|+|+|.|+ |.+|+.++..+.+.|++|++++.++......+.  -+.+.+++.|.+.+.++.+.+|++...
T Consensus        17 ~~~~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~apa~~~A--D~~~v~~~~D~~~l~~~a~~~dvIt~e   90 (577)
T PLN02948         17 VHGVSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCPASSVA--ARHVVGSFDDRAAVREFAKRCDVLTVE   90 (577)
T ss_pred             ccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhC--ceeeeCCCCCHHHHHHHHHHCCEEEEe
Confidence            34477899999997 799999999999999999999887653221121  234568899999998888889988654

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.51  E-value=0.054  Score=44.10  Aligned_cols=55  Identities=11%  Similarity=0.047  Sum_probs=45.7

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ....+|+|+|.|.+.-+|+.++..|.++|.+|+.+.++..                     ++++..+.+|+|+.+
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~---------------------~l~~~v~~ADIVvsA   78 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI---------------------QLQSKVHDADVVVVG   78 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc---------------------CHHHHHhhCCEEEEe
Confidence            3567899999999999999999999999999987764321                     345678889999988

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.49  E-value=0.034  Score=51.64  Aligned_cols=66  Identities=14%  Similarity=0.026  Sum_probs=49.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      .+.+||+.|.|. |.||+.+++.|...|++|++.++-..+.....        -...-..++.++++.+|+|++.
T Consensus       139 el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~--------~~~~~~~~Ld~lL~~sDiv~lh  204 (324)
T COG0111         139 ELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGV--------DGVVGVDSLDELLAEADILTLH  204 (324)
T ss_pred             cccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhcc--------ccceecccHHHHHhhCCEEEEc
Confidence            567999999996 99999999999999999999998332211110        0122335678899999999875

>PRK06849 hypothetical protein; Provisional

Probab=95.48  E-value=0.077  Score=50.33  Aligned_cols=38  Identities=11%  Similarity=-0.007  Sum_probs=34.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN  135 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~  135 (294)
                      .+|+|||||++..+|..+++.|.+.|++|++++.++..
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~   40 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP   40 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence            46999999999999999999999999999999888654

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=95.48  E-value=0.029  Score=53.90  Aligned_cols=40  Identities=8%  Similarity=0.056  Sum_probs=36.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES  139 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~  139 (294)
                      .++|.|.|. |.+|..++..|+++|++|+++++++++....
T Consensus         3 ~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v~~l   42 (415)
T PRK11064          3 FETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAVDTI   42 (415)
T ss_pred             ccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence            478999996 9999999999999999999999999876653

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=95.44  E-value=0.022  Score=52.62  Aligned_cols=34  Identities=18%  Similarity=0.250  Sum_probs=30.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDK  133 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~  133 (294)
                      |+|.|+||+|.+|..++..|+..|+  +|++++|++
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            6899999999999999999999986  599999954

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK14851 hypothetical protein; Provisional

Probab=95.42  E-value=0.11  Score=53.08  Aligned_cols=94  Identities=17%  Similarity=0.191  Sum_probs=63.2

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCcc---c----------------h---hh---hcCC--CcE
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---N----------------A---ME---SFGT--YVE  145 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~---~----------------~---~~---~~~~--~v~  145 (294)
                      ...+.+.+|+|.|+ |++|+.++..|+..|. ++++++.+.-   .                .   .+   ..++  +++
T Consensus        38 Q~kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~  116 (679)
T PRK14851         38 QERLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEIT  116 (679)
T ss_pred             HHHHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEE
Confidence            34667899999997 8899999999999996 5555554321   0                0   00   0122  455


Q ss_pred             EeecCCCCHHHHHHHhcCCcEEEEcCCc-------hHHhhhhhcCCCEEEEe
Q 022625          146 SMAGDASNKKFLKTALRGVRSIICPSEG-------FISNAGSLKGVQHVILL  190 (294)
Q Consensus       146 ~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-------~~~~~~~~~gv~r~V~v  190 (294)
                      .+...++ .+.+.++++++|+||.+.+.       .+.+.|.+.++. +|+.
T Consensus       117 ~~~~~i~-~~n~~~~l~~~DvVid~~D~~~~~~r~~l~~~c~~~~iP-~i~~  166 (679)
T PRK14851        117 PFPAGIN-ADNMDAFLDGVDVVLDGLDFFQFEIRRTLFNMAREKGIP-VITA  166 (679)
T ss_pred             EEecCCC-hHHHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHCCCC-EEEe
Confidence            6666775 56678899999999988553       244567777765 4444

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=95.42  E-value=0.036  Score=50.47  Aligned_cols=64  Identities=13%  Similarity=0.033  Sum_probs=47.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      .++|.|.|. |.+|..+++.|++.|++|++..|++++.......++..       ..++.++++++|+||.+
T Consensus         2 ~~~IgviG~-G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~-------~~~~~e~~~~~d~vi~~   65 (296)
T PRK11559          2 TMKVGFIGL-GIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAET-------ASTAKAVAEQCDVIITM   65 (296)
T ss_pred             CceEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee-------cCCHHHHHhcCCEEEEe
Confidence            368999995 99999999999999999999999887655432222211       12234566788999987

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=95.41  E-value=0.043  Score=49.71  Aligned_cols=66  Identities=14%  Similarity=0.103  Sum_probs=46.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      |+|.|.| .|.+|..++..|.++|++|+++.|+++........+..  . ...+.  . +.++++|+||.+.+
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~--~-~~~~~--~-~~~~~aDlVilavp   66 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLV--D-EASTD--L-SLLKDCDLVILALP   66 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCc--c-cccCC--H-hHhcCCCEEEEcCC
Confidence            4799999 59999999999999999999999988765543322210  0 01111  1 24678999998843

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.36  E-value=0.019  Score=45.95  Aligned_cols=91  Identities=14%  Similarity=0.123  Sum_probs=48.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc-CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEG  173 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~-~~~  173 (294)
                      ....++|.|.|+ |.+|..|.+.|.+.|+.|..+ .|+.+........     ..+ .....+.+.++.+|.+|.+ .+.
T Consensus         7 ~~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~-----~~~-~~~~~~~~~~~~aDlv~iavpDd   79 (127)
T PF10727_consen    7 QAARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAF-----IGA-GAILDLEEILRDADLVFIAVPDD   79 (127)
T ss_dssp             -----EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC-------TT------TTGGGCC-SEEEE-S-CC
T ss_pred             CCCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccc-----ccc-ccccccccccccCCEEEEEechH
Confidence            345789999998 999999999999999999887 4665443332210     011 1112234567888999988 343


Q ss_pred             hHHhhhh---hc---C-CCEEEEeccc
Q 022625          174 FISNAGS---LK---G-VQHVILLSQL  193 (294)
Q Consensus       174 ~~~~~~~---~~---g-v~r~V~vSs~  193 (294)
                      .+...+.   ..   . -+-||++|..
T Consensus        80 aI~~va~~La~~~~~~~g~iVvHtSGa  106 (127)
T PF10727_consen   80 AIAEVAEQLAQYGAWRPGQIVVHTSGA  106 (127)
T ss_dssp             HHHHHHHHHHCC--S-TT-EEEES-SS
T ss_pred             HHHHHHHHHHHhccCCCCcEEEECCCC
Confidence            3333221   11   1 2456777754

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=95.35  E-value=0.037  Score=50.63  Aligned_cols=63  Identities=10%  Similarity=0.070  Sum_probs=45.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ++|.|.|. |.+|..++..|++.|++|.+..|++++.......+..     .  ..+..++++++|+||.+
T Consensus         2 ~~Ig~IGl-G~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~-----~--~~s~~~~~~~aDvVi~~   64 (296)
T PRK15461          2 AAIAFIGL-GQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGAT-----P--AASPAQAAAGAEFVITM   64 (296)
T ss_pred             CeEEEEee-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCc-----c--cCCHHHHHhcCCEEEEe
Confidence            57999995 9999999999999999999999998876543322221     1  11233456677777766

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=95.35  E-value=0.034  Score=46.48  Aligned_cols=73  Identities=11%  Similarity=-0.061  Sum_probs=49.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCC-------------------CCHHHH
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA-------------------SNKKFL  157 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~-------------------~d~~~l  157 (294)
                      .+..+|+|+|+ |.+|..-++.|...|++|+.+...+.............+..+.                   .....+
T Consensus        18 ~~p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f   96 (168)
T PF01262_consen   18 VPPAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF   96 (168)
T ss_dssp             E-T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred             CCCeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence            34589999995 9999999999999999999999887765443333333333331                   123456


Q ss_pred             HHHhcCCcEEEEc
Q 022625          158 KTALRGVRSIICP  170 (294)
Q Consensus       158 ~~~l~~~d~Vi~~  170 (294)
                      .+.++.+|.||.+
T Consensus        97 ~~~i~~~d~vI~~  109 (168)
T PF01262_consen   97 AEFIAPADIVIGN  109 (168)
T ss_dssp             HHHHHH-SEEEEH
T ss_pred             HHHHhhCcEEeee
Confidence            7777888999975

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.33  E-value=0.033  Score=54.51  Aligned_cols=70  Identities=13%  Similarity=0.059  Sum_probs=48.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ...+++++|+|+ |++|+.++..|.+.|++|++..|+.+++.+.... ......++.   .+. .+.++|+||++.
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~-~~~~~~~~~---~~~-~l~~~DiVInat  398 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR-CQGKAFPLE---SLP-ELHRIDIIINCL  398 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hccceechh---Hhc-ccCCCCEEEEcC
Confidence            456789999996 8999999999999999999999988765443211 110111222   221 256789999984

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.33  E-value=0.15  Score=46.58  Aligned_cols=98  Identities=14%  Similarity=0.145  Sum_probs=60.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcE-EeecCCCCH-HHHHHHh-cCCcEEEEcCCc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVE-SMAGDASNK-KFLKTAL-RGVRSIICPSEG  173 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~-~v~~D~~d~-~~l~~~l-~~~d~Vi~~~~~  173 (294)
                      .++.+++|.|++|.+|..+++.+...|.+|+++++++++......-+.. ++..+-.+. ..+.... +++|.+|++.++
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~  217 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGG  217 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcH
Confidence            4578999999999999999998888999999999887664433221222 222221121 2222221 468999998554


Q ss_pred             hH-Hhhhhh-cCCCEEEEecccc
Q 022625          174 FI-SNAGSL-KGVQHVILLSQLS  194 (294)
Q Consensus       174 ~~-~~~~~~-~gv~r~V~vSs~~  194 (294)
                      .. ..+.+. ....++|.+++..
T Consensus       218 ~~~~~~~~~l~~~g~~v~~g~~~  240 (329)
T cd08250         218 EMFDTCVDNLALKGRLIVIGFIS  240 (329)
T ss_pred             HHHHHHHHHhccCCeEEEEeccc
Confidence            32 222222 2345888887654

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.30  E-value=0.19  Score=45.62  Aligned_cols=96  Identities=9%  Similarity=0.132  Sum_probs=61.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHhc--CCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l~--~~d~Vi~~~  171 (294)
                      .++.+|+|.|++|.+|..+++.+...|.+|++++++.++.......+++.+. +..+.   +.+.+...  ++|.||.+.
T Consensus       138 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~i~~~~~~~~~d~v~d~~  216 (324)
T cd08292         138 KPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVV-STEQPGWQDKVREAAGGAPISVALDSV  216 (324)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEE-cCCCchHHHHHHHHhCCCCCcEEEECC
Confidence            3578999999999999999999999999999999887764433222333222 22222   33444443  689999884


Q ss_pred             CchH-Hhhhhh-cCCCEEEEeccc
Q 022625          172 EGFI-SNAGSL-KGVQHVILLSQL  193 (294)
Q Consensus       172 ~~~~-~~~~~~-~gv~r~V~vSs~  193 (294)
                      ++.. .++.+. ..-.+||.++..
T Consensus       217 g~~~~~~~~~~l~~~g~~v~~g~~  240 (324)
T cd08292         217 GGKLAGELLSLLGEGGTLVSFGSM  240 (324)
T ss_pred             CChhHHHHHHhhcCCcEEEEEecC
Confidence            4432 222221 123578888643

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.30  E-value=0.046  Score=50.91  Aligned_cols=63  Identities=14%  Similarity=0.097  Sum_probs=49.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      .+.+++|.|.|. |.||+.+++.|...|++|++.+|++.....    .++     .  ..++.++++++|+|+.+
T Consensus       143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~----~~~-----~--~~~l~ell~~aDiVil~  205 (330)
T PRK12480        143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLD----FLT-----Y--KDSVKEAIKDADIISLH  205 (330)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhh----hhh-----c--cCCHHHHHhcCCEEEEe
Confidence            467899999996 999999999999999999999988754221    011     1  12467889999999977

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=95.29  E-value=0.076  Score=52.28  Aligned_cols=96  Identities=17%  Similarity=0.058  Sum_probs=62.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCC--------------H--HH----
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--------------K--KF----  156 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d--------------~--~~----  156 (294)
                      .++.+|+|+|+ |-+|...+..+...|.+|+++++++++.+....-+.+++..|..+              .  +.    
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~  241 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL  241 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence            46789999998 999999999999999999999999887655433345544333321              1  11    


Q ss_pred             HHHHhcCCcEEEEcCC--c-----hH-HhhhhhcC-CCEEEEeccc
Q 022625          157 LKTALRGVRSIICPSE--G-----FI-SNAGSLKG-VQHVILLSQL  193 (294)
Q Consensus       157 l~~~l~~~d~Vi~~~~--~-----~~-~~~~~~~g-v~r~V~vSs~  193 (294)
                      +.+..+++|+||.+..  +     .+ .++.+..+ -..+|.++..
T Consensus       242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~  287 (509)
T PRK09424        242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAE  287 (509)
T ss_pred             HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccC
Confidence            1222357999999832  2     32 33322222 2467777753

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=95.29  E-value=0.16  Score=45.50  Aligned_cols=96  Identities=20%  Similarity=0.160  Sum_probs=59.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHh--cCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l--~~~d~Vi~~~  171 (294)
                      .++.+++|+|++|.+|..+++.+...|.+|+++.++.++.......+++. ..+..+.   ..+.+..  .++|.+|++.
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  216 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADV-AINYRTEDFAEEVKEATGGRGVDVILDMV  216 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCE-EEeCCchhHHHHHHHHhCCCCeEEEEECC
Confidence            35789999999999999999999999999999998876544322112221 1223322   2333333  3689999985


Q ss_pred             CchHHh-hhhh-cCCCEEEEeccc
Q 022625          172 EGFISN-AGSL-KGVQHVILLSQL  193 (294)
Q Consensus       172 ~~~~~~-~~~~-~gv~r~V~vSs~  193 (294)
                      ++.... .... ..-.+++.++..
T Consensus       217 g~~~~~~~~~~~~~~g~~i~~~~~  240 (323)
T cd05276         217 GGDYLARNLRALAPDGRLVLIGLL  240 (323)
T ss_pred             chHHHHHHHHhhccCCEEEEEecC
Confidence            543222 1111 122477777654

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=95.28  E-value=0.03  Score=50.94  Aligned_cols=62  Identities=10%  Similarity=-0.018  Sum_probs=45.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      +|.|.|. |.+|..+++.|++.|++|++..|++++.......+..       ...+..++++++|+||.+
T Consensus         1 ~IgvIG~-G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------~~~~~~~~~~~aDivi~~   62 (291)
T TIGR01505         1 KVGFIGL-GIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAV-------TAETARQVTEQADVIFTM   62 (291)
T ss_pred             CEEEEEe-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCc-------ccCCHHHHHhcCCEEEEe
Confidence            4788885 9999999999999999999999998776543322221       112344667788888887

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.28  E-value=0.22  Score=44.82  Aligned_cols=97  Identities=13%  Similarity=0.083  Sum_probs=61.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCC-HHHHHHHhcCCcEEEEcCCchH
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSEGFI  175 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d-~~~l~~~l~~~d~Vi~~~~~~~  175 (294)
                      ..+.+|+|.|++|.+|..+++.+...|.+|+++++++++......-+++.+..+-.+ .+.+.+.-+++|.++.+.++..
T Consensus       141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~~  220 (320)
T cd08243         141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTAT  220 (320)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEecCccHHHHHHHhCCCceEEEECCChHH
Confidence            457899999999999999999999999999999988876543322233333222111 2333333246899998854432


Q ss_pred             -Hhhhhhc-CCCEEEEeccc
Q 022625          176 -SNAGSLK-GVQHVILLSQL  193 (294)
Q Consensus       176 -~~~~~~~-gv~r~V~vSs~  193 (294)
                       .+..+.. ...+|+.++..
T Consensus       221 ~~~~~~~l~~~g~~v~~g~~  240 (320)
T cd08243         221 LKDSLRHLRPGGIVCMTGLL  240 (320)
T ss_pred             HHHHHHHhccCCEEEEEccC
Confidence             2222221 23578887754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.28  E-value=0.043  Score=51.21  Aligned_cols=66  Identities=15%  Similarity=0.019  Sum_probs=49.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+.+|+|.|.|- |.||+.+++.|...|++|++..|....... ...++     .   ..++.++++.+|+|+.+
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-~~~~~-----~---~~~l~ell~~aDiV~l~  211 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEAE-KELGA-----E---YRPLEELLRESDFVSLH  211 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhhH-HHcCC-----E---ecCHHHHHhhCCEEEEe
Confidence            3578999999997 999999999999999999999887643211 00011     1   12466788999999977

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=95.27  E-value=0.071  Score=49.26  Aligned_cols=78  Identities=15%  Similarity=0.103  Sum_probs=49.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC-ch--
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-GF--  174 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~-~~--  174 (294)
                      +.+|.|.||||++|.++++.|.++.+ ++..+..+..+              ++.+   ....+.++|+||.+.+ +.  
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~--------------~~~~---~~~~~~~~DvvFlalp~~~s~   64 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK--------------DAAA---RRELLNAADVAILCLPDDAAR   64 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC--------------cccC---chhhhcCCCEEEECCCHHHHH
Confidence            56899999999999999999888753 55555443321              1111   1245578999999843 22  


Q ss_pred             -HHhhhhhcCCCEEEEecccc
Q 022625          175 -ISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       175 -~~~~~~~~gv~r~V~vSs~~  194 (294)
                       +...+.+.|+ ++|=.|+..
T Consensus        65 ~~~~~~~~~g~-~VIDlSadf   84 (313)
T PRK11863         65 EAVALIDNPAT-RVIDASTAH   84 (313)
T ss_pred             HHHHHHHhCCC-EEEECChhh
Confidence             2223334454 577777754

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=95.27  E-value=0.053  Score=42.59  Aligned_cols=81  Identities=12%  Similarity=0.115  Sum_probs=46.9

Q ss_pred             CeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC-ch-
Q 022625          100 DAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-GF-  174 (294)
Q Consensus       100 ~~vlVtGat---G~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~-~~-  174 (294)
                      |+|.|.|++   +..|..+++.|.++|++|+.+.-......     +...+       .++.+.-..+|.++.+.. .. 
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i~-----G~~~y-------~sl~e~p~~iDlavv~~~~~~~   68 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEIL-----GIKCY-------PSLAEIPEPIDLAVVCVPPDKV   68 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEET-----TEE-B-------SSGGGCSST-SEEEE-S-HHHH
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEEC-----cEEee-------ccccCCCCCCCEEEEEcCHHHH
Confidence            689999988   77899999999999999998854443221     11111       112221245688887733 22 


Q ss_pred             --HHhhhhhcCCCEEEEecc
Q 022625          175 --ISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       175 --~~~~~~~~gv~r~V~vSs  192 (294)
                        +.+.+.+.|++.+++.++
T Consensus        69 ~~~v~~~~~~g~~~v~~~~g   88 (116)
T PF13380_consen   69 PEIVDEAAALGVKAVWLQPG   88 (116)
T ss_dssp             HHHHHHHHHHT-SEEEE-TT
T ss_pred             HHHHHHHHHcCCCEEEEEcc
Confidence              344456679999999988

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.25  E-value=0.052  Score=49.47  Aligned_cols=39  Identities=10%  Similarity=0.018  Sum_probs=34.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME  138 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~  138 (294)
                      .++|.|.|+ |.+|..++..|+..|++|++++++++.+..
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~   43 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATA   43 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            468999997 999999999999999999999999876443

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.25  E-value=0.15  Score=44.62  Aligned_cols=97  Identities=13%  Similarity=0.103  Sum_probs=58.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH----hcCCcEEEEcCC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA----LRGVRSIICPSE  172 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~----l~~~d~Vi~~~~  172 (294)
                      .++.+|+|+|+++ +|..+++.+...|.+|+++++++++.......+.+. ..|..+.+.....    -.++|++|++.+
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~~  210 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADH-VIDYKEEDLEEELRLTGGGGADVVIDAVG  210 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCce-eccCCcCCHHHHHHHhcCCCCCEEEECCC
Confidence            4678999999988 999999999899999999999876543322111211 1233222222211    246899999854


Q ss_pred             c-h-HHhhhhh-cCCCEEEEeccccc
Q 022625          173 G-F-ISNAGSL-KGVQHVILLSQLSV  195 (294)
Q Consensus       173 ~-~-~~~~~~~-~gv~r~V~vSs~~~  195 (294)
                      + . ...+... ..-.+++.++....
T Consensus       211 ~~~~~~~~~~~l~~~G~~v~~~~~~~  236 (271)
T cd05188         211 GPETLAQALRLLRPGGRIVVVGGTSG  236 (271)
T ss_pred             CHHHHHHHHHhcccCCEEEEEccCCC
Confidence            4 2 2222111 12357888876543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.25  E-value=0.05  Score=49.89  Aligned_cols=55  Identities=9%  Similarity=0.105  Sum_probs=45.2

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ....||+|+|.|.+|.+|+.++..|+++|++|+++.|...                     ++++..+.+|+||.+
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~---------------------~l~e~~~~ADIVIsa  209 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST---------------------DAKALCRQADIVVAA  209 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC---------------------CHHHHHhcCCEEEEe
Confidence            4678999999999999999999999999999998865532                     245566677777776

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.24  E-value=0.04  Score=44.75  Aligned_cols=67  Identities=9%  Similarity=0.037  Sum_probs=45.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEee----------cCCCCHHHHHHHhcCCcEEEEcC
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMA----------GDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~----------~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      |+|.|+ |.||..++.+|.+.|++|.++.|.+ ..+.....++.+..          ....+.   ......+|.||.+.
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~viv~v   75 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP---SADAGPYDLVIVAV   75 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH---GHHHSTESEEEE-S
T ss_pred             CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc---hhccCCCcEEEEEe
Confidence            689997 8999999999999999999999998 44332212222211          122222   34567789999985


Q ss_pred             Cc
Q 022625          172 EG  173 (294)
Q Consensus       172 ~~  173 (294)
                      ..
T Consensus        76 Ka   77 (151)
T PF02558_consen   76 KA   77 (151)
T ss_dssp             SG
T ss_pred             cc
Confidence            43

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=95.22  E-value=0.085  Score=53.02  Aligned_cols=36  Identities=19%  Similarity=0.112  Sum_probs=29.7

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVK  131 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R  131 (294)
                      ..+...+|+|.|| |++|..+++.|+..|. ++++++.
T Consensus       334 ekL~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~  370 (664)
T TIGR01381       334 ERYSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDN  370 (664)
T ss_pred             HHHhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcC
Confidence            4566789999998 8899999999999997 5555543

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.20  E-value=0.054  Score=49.63  Aligned_cols=54  Identities=9%  Similarity=0.122  Sum_probs=45.1

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEE-cCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~-R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ....||+|+|.|.++.+|+.++..|+++|++|++.. |+.                      .++++.+.+|+||.+
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~----------------------~l~e~~~~ADIVIsa  208 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR----------------------DLPAVCRRADILVAA  208 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC----------------------CHHHHHhcCCEEEEe
Confidence            367899999999999999999999999999999883 543                      135667788888887

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.20  E-value=0.18  Score=46.01  Aligned_cols=96  Identities=16%  Similarity=0.132  Sum_probs=59.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCH---HHHHHHh-cCCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNK---KFLKTAL-RGVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~---~~l~~~l-~~~d~Vi~~~~  172 (294)
                      ++.+|+|.|++|.+|..+++.+...|.+|+++++++++...... -++..+ .|..+.   +.+.+.. .++|+++.+.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~v~~~~~~~~d~vi~~~g  223 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAA-INYKTPDLAEALKEAAPDGIDVYFDNVG  223 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceE-EecCChhHHHHHHHhccCCceEEEEcch
Confidence            56899999999999999999999999999999988766443321 122111 122222   2233222 46899999855


Q ss_pred             chHHh-hhhh-cCCCEEEEecccc
Q 022625          173 GFISN-AGSL-KGVQHVILLSQLS  194 (294)
Q Consensus       173 ~~~~~-~~~~-~gv~r~V~vSs~~  194 (294)
                      +.... +... ..-.+||.++...
T Consensus       224 ~~~~~~~~~~l~~~G~~v~~g~~~  247 (329)
T cd05288         224 GEILDAALTLLNKGGRIALCGAIS  247 (329)
T ss_pred             HHHHHHHHHhcCCCceEEEEeecc
Confidence            43222 2111 1235788886543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.19  E-value=0.17  Score=45.92  Aligned_cols=96  Identities=16%  Similarity=0.129  Sum_probs=60.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHh--cCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l--~~~d~Vi~~~  171 (294)
                      .++.+|+|+|++|.+|..+++.+...|.+|+.+++++++......-++..+ .|..+.   +.+.+..  +++|.++++.
T Consensus       141 ~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vl~~~  219 (324)
T cd08244         141 TPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVA-VDYTRPDWPDQVREALGGGGVTVVLDGV  219 (324)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEE-EecCCccHHHHHHHHcCCCCceEEEECC
Confidence            357899999999999999999999999999999988776543322223221 222222   3344444  3589999985


Q ss_pred             CchHHh-hhhh-cCCCEEEEeccc
Q 022625          172 EGFISN-AGSL-KGVQHVILLSQL  193 (294)
Q Consensus       172 ~~~~~~-~~~~-~gv~r~V~vSs~  193 (294)
                      ++.... ..+. ....++|.++..
T Consensus       220 g~~~~~~~~~~l~~~g~~v~~g~~  243 (324)
T cd08244         220 GGAIGRAALALLAPGGRFLTYGWA  243 (324)
T ss_pred             ChHhHHHHHHHhccCcEEEEEecC
Confidence            443222 1111 123578888654

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=95.16  E-value=0.098  Score=49.28  Aligned_cols=67  Identities=12%  Similarity=0.109  Sum_probs=52.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEc
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP  170 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~  170 (294)
                      +|+|.|+ |..|..+++.+.+.|++|++++.++......+.  -+.+..|..|.+.+.++++  ++|+|+..
T Consensus         1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~~id~v~~~   69 (380)
T TIGR01142         1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA--HRSYVINMLDGDALRAVIEREKPDYIVPE   69 (380)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhC--ceEEEcCCCCHHHHHHHHHHhCCCEEEec
Confidence            5899996 999999999999999999999988754322222  2456678889999988887  68988864

This enzyme is an alternative to PurN (TIGR00639)

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.14  E-value=0.044  Score=49.84  Aligned_cols=37  Identities=8%  Similarity=0.070  Sum_probs=33.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA  136 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~  136 (294)
                      .++|.|.|+ |.+|..++..|+..|++|+++.++++..
T Consensus         3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l   39 (287)
T PRK08293          3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEAL   39 (287)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence            368999997 9999999999999999999999987653

>PLN03139 formate dehydrogenase; Provisional

Probab=95.09  E-value=0.062  Score=51.14  Aligned_cols=68  Identities=12%  Similarity=0.016  Sum_probs=49.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+.+|+|.|.|. |.||+.+++.|...|++|+...|...........++.       -.++++++++.+|+|+.+
T Consensus       195 ~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~-------~~~~l~ell~~sDvV~l~  262 (386)
T PLN03139        195 YDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAK-------FEEDLDAMLPKCDVVVIN  262 (386)
T ss_pred             cCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCce-------ecCCHHHHHhhCCEEEEe
Confidence            4678999999995 9999999999999999999888765322111111111       123577888999999976

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=95.08  E-value=0.05  Score=50.11  Aligned_cols=37  Identities=11%  Similarity=0.084  Sum_probs=32.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN  135 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~  135 (294)
                      ..|+|+|.|+ |.||..++..|.+.|++|+++.|+...
T Consensus         4 ~~m~I~IiG~-GaiG~~lA~~L~~~g~~V~~~~r~~~~   40 (313)
T PRK06249          4 ETPRIGIIGT-GAIGGFYGAMLARAGFDVHFLLRSDYE   40 (313)
T ss_pred             cCcEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCHH
Confidence            3478999987 999999999999999999999998743

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=95.05  E-value=0.078  Score=52.15  Aligned_cols=71  Identities=11%  Similarity=-0.016  Sum_probs=48.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC---------CCcE---E-eecCCCCHHHHHHHhcCCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG---------TYVE---S-MAGDASNKKFLKTALRGVR  165 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---------~~v~---~-v~~D~~d~~~l~~~l~~~d  165 (294)
                      -++|.|.|+ |.+|..++..|++.|++|++.++++++......         ..+.   . ..+.+.-.+++.++++++|
T Consensus         4 i~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD   82 (495)
T PRK07531          4 IMKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGAD   82 (495)
T ss_pred             cCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCC
Confidence            368999986 999999999999999999999999876433100         0000   0 0011111234567789999


Q ss_pred             EEEEc
Q 022625          166 SIICP  170 (294)
Q Consensus       166 ~Vi~~  170 (294)
                      +|+-+
T Consensus        83 ~Viea   87 (495)
T PRK07531         83 WIQES   87 (495)
T ss_pred             EEEEc
Confidence            99987

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=95.03  E-value=0.08  Score=48.69  Aligned_cols=63  Identities=11%  Similarity=0.150  Sum_probs=45.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccchhhhcC----------CCcEEeecCCCCHHHHHHHhcCCcEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFG----------TYVESMAGDASNKKFLKTALRGVRSI  167 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~----------~~v~~v~~D~~d~~~l~~~l~~~d~V  167 (294)
                      ++|.|.|+ |.+|+.++..|+..|  ++|++++|+++++.....          ....+..   .+.    +.+.++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~----~~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDY----SDCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCH----HHhCCCCEE
Confidence            47999997 999999999999999  689999998876443211          1112221   222    346899999


Q ss_pred             EEc
Q 022625          168 ICP  170 (294)
Q Consensus       168 i~~  170 (294)
                      |++
T Consensus        73 Iit   75 (306)
T cd05291          73 VIT   75 (306)
T ss_pred             EEc
Confidence            998

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=95.03  E-value=0.21  Score=46.20  Aligned_cols=65  Identities=9%  Similarity=0.164  Sum_probs=46.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCccchhhh-------cC--CCcEEeecCCCCHHHHHHHhcCCcE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMES-------FG--TYVESMAGDASNKKFLKTALRGVRS  166 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~~~~~~~-------~~--~~v~~v~~D~~d~~~l~~~l~~~d~  166 (294)
                      .+++|.|+|| |.+|..++..|+..|.  ++.+++++++++...       .+  ..+.+..   .+    .+.++++|+
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~----~~~~~~adi   76 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GD----YSDCKDADL   76 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CC----HHHhCCCCE
Confidence            4679999998 9999999999999886  799999887653221       00  1222221   12    245899999


Q ss_pred             EEEc
Q 022625          167 IICP  170 (294)
Q Consensus       167 Vi~~  170 (294)
                      ||.+
T Consensus        77 vIit   80 (315)
T PRK00066         77 VVIT   80 (315)
T ss_pred             EEEe
Confidence            9997

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=95.01  E-value=0.087  Score=51.36  Aligned_cols=170  Identities=11%  Similarity=0.107  Sum_probs=90.0

Q ss_pred             CCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH
Q 022625           97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA  160 (294)
Q Consensus        97 ~~~~~vlVtGa----------------tG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~  160 (294)
                      +.|++||||+|                ||..|.+|++.+..+|++|+++.-.- ...  .+.+++++..  .+..++.++
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~-~~~--~p~~v~~i~V--~ta~eM~~a  328 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPV-DLA--DPQGVKVIHV--ESARQMLAA  328 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCc-CCC--CCCCceEEEe--cCHHHHHHH
Confidence            46888888886                79999999999999999999987332 221  3346666654  455555544


Q ss_pred             hc---CCcEEEEcC--CchHHhhhhhcCCC-------EEEEeccccc------ccC--CCCchhccchhHHHHHHHHHHH
Q 022625          161 LR---GVRSIICPS--EGFISNAGSLKGVQ-------HVILLSQLSV------YRG--SGGIQALMKGNARKLAEQDESM  220 (294)
Q Consensus       161 l~---~~d~Vi~~~--~~~~~~~~~~~gv~-------r~V~vSs~~~------~~~--~~~~~~~~~~~~~~~~~~ae~~  220 (294)
                      +.   .+|++|+++  ..|........++|       .+-+.-+-..      ...  ....-.+.. ........+..-
T Consensus       329 v~~~~~~Di~I~aAAVaDyrp~~~~~~KiKk~~~~~~~L~L~~nPDIL~~l~~~~~~~~~~lVGFaa-Et~~l~~~A~~K  407 (475)
T PRK13982        329 VEAALPADIAIFAAAVADWRVATEGGQKLKKGAAGPPPLQLVENPDILATISKLAENRPPLVIGFAA-ETEHLIDNARAK  407 (475)
T ss_pred             HHhhCCCCEEEEeccccceeeccccccccCcCCCCCceeeeeeCcHHHHHHhhhcccCCCEEEEEcc-CchhHHHHHHHH
Confidence            43   269999872  22211111111111       1111111111      000  000001100 011233455666


Q ss_pred             HHhCCCCEEEEEcccee-cCCC--CCcceeecc-CC----CCCCCcCHHHHHHHHHHHhh
Q 022625          221 LMASGIPYTIIRTGVLQ-NTPG--GKQGFQFEE-GC----AANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       221 l~~~gl~~tivRPg~l~-~~~~--~~~~~~~~~-g~----~~~~~Is~eDvA~~iv~aL~  272 (294)
                      +...++++++...-... .+.+  ......+.. |.    ......+.+++|+.++..+.
T Consensus       408 L~~K~~D~IvaN~v~~~~~gfg~d~n~v~ii~~~g~~~~~~~~~~~sK~~iA~~Il~~i~  467 (475)
T PRK13982        408 LARKGCDWIVANDVSPATGVMGGDRNTVHLLSRDGDAEKVESWPVMTKDEVATALVARIA  467 (475)
T ss_pred             HHHcCCCEEEEccCCcCCCCcCCCccEEEEEECCCCccceeEcCCCCHHHHHHHHHHHHH
Confidence            77799999987753211 1111  222233332 21    24556688999999998763

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=94.98  E-value=0.05  Score=48.74  Aligned_cols=65  Identities=11%  Similarity=0.096  Sum_probs=46.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEEcCccchhhhcCC-CcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      +++|.|.|+ |.+|..+++.|.+.|   ++|.+++|++++....... ++.+    ..+   ..+.++.+|+||.+.
T Consensus         2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~----~~~---~~~~~~~advVil~v   70 (267)
T PRK11880          2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRA----ATD---NQEAAQEADVVVLAV   70 (267)
T ss_pred             CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCee----cCC---hHHHHhcCCEEEEEc
Confidence            578999997 999999999999998   7899999998765433221 2221    112   234467789888873

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=94.96  E-value=0.037  Score=54.90  Aligned_cols=43  Identities=16%  Similarity=0.115  Sum_probs=37.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES  139 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~  139 (294)
                      ...+++++|+|+ |++|+.++..|++.|++|+++.|+.+++...
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~l  418 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKEL  418 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            356789999998 8999999999999999999999987766543

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.94  E-value=0.23  Score=46.56  Aligned_cols=89  Identities=18%  Similarity=0.185  Sum_probs=50.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH-CCCe---EEEEEcCcc--chhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIV-KRTR---IKALVKDKR--NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~-~g~~---V~~~~R~~~--~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ++++|.|.||||++|+++++.|.. ..++   +..+....+  +........+.+.  ++ |++    .+.++|+||.+.
T Consensus         4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~--~~-~~~----~~~~~Divf~a~   76 (347)
T PRK06728          4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQ--EA-KIN----SFEGVDIAFFSA   76 (347)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEE--eC-CHH----HhcCCCEEEECC
Confidence            347999999999999999999995 6666   555544322  1111111122222  22 333    246899999984


Q ss_pred             Cc-h---HHhhhhhcCCCEEEEecccc
Q 022625          172 EG-F---ISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       172 ~~-~---~~~~~~~~gv~r~V~vSs~~  194 (294)
                      +. .   +...+.+.|. .+|=.|+..
T Consensus        77 ~~~~s~~~~~~~~~~G~-~VID~Ss~f  102 (347)
T PRK06728         77 GGEVSRQFVNQAVSSGA-IVIDNTSEY  102 (347)
T ss_pred             ChHHHHHHHHHHHHCCC-EEEECchhh
Confidence            32 2   2223334453 455555543

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.92  E-value=0.16  Score=49.60  Aligned_cols=68  Identities=9%  Similarity=-0.032  Sum_probs=48.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-h----hhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-A----MESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~----~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ...+++|+|.|+ |.+|.++++.|.++|++|+++.+.... .    ......++++..++-..      ...++|.||.+
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s   85 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------LPEDTDLVVTS   85 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEEC
Confidence            345789999997 899999999999999999998865431 1    11222367776654322      24568988887

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=94.87  E-value=0.075  Score=38.45  Aligned_cols=35  Identities=20%  Similarity=0.209  Sum_probs=31.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA  136 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~  136 (294)
                      +|+|.|| |++|-+++..|.+.|.+|+++.|.+.-.
T Consensus         1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~~   35 (80)
T PF00070_consen    1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRLL   35 (80)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchhh
Confidence            5789997 9999999999999999999999987543

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=94.85  E-value=0.22  Score=45.68  Aligned_cols=29  Identities=17%  Similarity=0.134  Sum_probs=24.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEE
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALV  130 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~  130 (294)
                      +|+|.|+ |++|.++++.|+..|. ++++++
T Consensus         1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD   30 (307)
T cd01486           1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVD   30 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEC
Confidence            5899998 8899999999999997 454444

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=94.84  E-value=0.041  Score=52.74  Aligned_cols=70  Identities=14%  Similarity=0.026  Sum_probs=47.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEe-------------ecCCCCHHHHHHHhcCCcE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM-------------AGDASNKKFLKTALRGVRS  166 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v-------------~~D~~d~~~l~~~l~~~d~  166 (294)
                      |+|.|.|. |.+|..++..|++.|++|+++.+++++..........+.             .+.++-..+..++++++|+
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv   79 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV   79 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence            47899996 999999999999999999999999887654322111000             0111111234456788999


Q ss_pred             EEEc
Q 022625          167 IICP  170 (294)
Q Consensus       167 Vi~~  170 (294)
                      ||.+
T Consensus        80 vii~   83 (411)
T TIGR03026        80 IIIC   83 (411)
T ss_pred             EEEE
Confidence            9887

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PLN02740 Alcohol dehydrogenase-like

Probab=94.84  E-value=0.23  Score=46.84  Aligned_cols=96  Identities=11%  Similarity=0.055  Sum_probs=60.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCC-----HHHHHHHhc-CCcEEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN-----KKFLKTALR-GVRSII  168 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d-----~~~l~~~l~-~~d~Vi  168 (294)
                      ..++.+|+|+|+ |.+|...++.+...|. +|+++++++++......-+...+ .|..+     .+.+.+... ++|++|
T Consensus       196 ~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~-i~~~~~~~~~~~~v~~~~~~g~dvvi  273 (381)
T PLN02740        196 VQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDF-INPKDSDKPVHERIREMTGGGVDYSF  273 (381)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEE-EecccccchHHHHHHHHhCCCCCEEE
Confidence            346789999996 9999999998888998 69888888876554322223222 23332     123444333 689999


Q ss_pred             EcCCc--hHHhhhhh--cCCCEEEEeccc
Q 022625          169 CPSEG--FISNAGSL--KGVQHVILLSQL  193 (294)
Q Consensus       169 ~~~~~--~~~~~~~~--~gv~r~V~vSs~  193 (294)
                      .+.++  .+..+...  .+-.++|.++..
T Consensus       274 d~~G~~~~~~~a~~~~~~g~G~~v~~G~~  302 (381)
T PLN02740        274 ECAGNVEVLREAFLSTHDGWGLTVLLGIH  302 (381)
T ss_pred             ECCCChHHHHHHHHhhhcCCCEEEEEccC
Confidence            98543  33333222  223678888754

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=94.83  E-value=0.079  Score=49.22  Aligned_cols=65  Identities=11%  Similarity=0.016  Sum_probs=44.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEEcCccc--hhh----hcC------CCcEEeecCCCCHHHHHH
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRN--AME----SFG------TYVESMAGDASNKKFLKT  159 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~-------~V~~~~R~~~~--~~~----~~~------~~v~~v~~D~~d~~~l~~  159 (294)
                      .++|.|+||+|.+|..++..|+.+|.       ++.+++.++..  +..    +..      ..+++     +  ....+
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-----~--~~~~~   74 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-----T--DDPNV   74 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-----e--cCcHH
Confidence            36999999999999999999998874       68888875432  211    100      01111     1  12246


Q ss_pred             HhcCCcEEEEc
Q 022625          160 ALRGVRSIICP  170 (294)
Q Consensus       160 ~l~~~d~Vi~~  170 (294)
                      .++++|+||.+
T Consensus        75 ~~~daDivvit   85 (322)
T cd01338          75 AFKDADWALLV   85 (322)
T ss_pred             HhCCCCEEEEe
Confidence            78999999987

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=94.80  E-value=0.28  Score=44.59  Aligned_cols=95  Identities=14%  Similarity=0.026  Sum_probs=59.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCC--HHHHHHHh-cCCcEEEEcCCch
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTAL-RGVRSIICPSEGF  174 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d--~~~l~~~l-~~~d~Vi~~~~~~  174 (294)
                      .+.+|+|.|++|.+|..+++.+...|.+|+++++++++.......++..+ .|..+  .+.+.+.- .++|.++.+.++.
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~d~vld~~g~~  224 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEV-IPREELQEESIKPLEKQRWAGAVDPVGGK  224 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEE-EcchhHHHHHHHhhccCCcCEEEECCcHH
Confidence            35799999999999999999999999999999998876544322233222 22222  22233321 3579999885432


Q ss_pred             -HHhhhhh-cCCCEEEEeccc
Q 022625          175 -ISNAGSL-KGVQHVILLSQL  193 (294)
Q Consensus       175 -~~~~~~~-~gv~r~V~vSs~  193 (294)
                       +...... ..-.++|.++..
T Consensus       225 ~~~~~~~~l~~~G~~i~~g~~  245 (326)
T cd08289         225 TLAYLLSTLQYGGSVAVSGLT  245 (326)
T ss_pred             HHHHHHHHhhcCCEEEEEeec
Confidence             2222221 234588888754

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=94.80  E-value=0.048  Score=49.18  Aligned_cols=67  Identities=16%  Similarity=0.154  Sum_probs=47.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC---C-C-cEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG---T-Y-VESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~-~-v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+++++|+|+ |++|+.++..|+..|++|.++.|+.+++.+...   . . +..  .+..+     ..+.++|+||+++
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~--~~~~~-----~~~~~~DivInat  186 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQA--FSMDE-----LPLHRVDLIINAT  186 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEE--echhh-----hcccCccEEEECC
Confidence            35789999998 899999999999999999999999876544321   1 1 111  11111     1245789999983

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=94.79  E-value=0.26  Score=44.33  Aligned_cols=94  Identities=11%  Similarity=-0.002  Sum_probs=56.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCccchhhhcCCCcEEeecCCCCH-HHHHHHh--cCCcEEEEcCCc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTAL--RGVRSIICPSEG  173 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~v~~v~~D~~d~-~~l~~~l--~~~d~Vi~~~~~  173 (294)
                      ++.+|+|.|+ |.+|...++.+...|.+ |+++.+++++......-+.+.+ .|..+. +.+.+..  .++|++|.+.+.
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~-i~~~~~~~~~~~~~~~~g~d~vid~~G~  197 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATAL-AEPEVLAERQGGLQNGRGVDVALEFSGA  197 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEe-cCchhhHHHHHHHhCCCCCCEEEECCCC
Confidence            6789999987 89999999888888987 7777777666433222122221 122222 2333333  368999998532


Q ss_pred             --hHHhhhhhc-CCCEEEEeccc
Q 022625          174 --FISNAGSLK-GVQHVILLSQL  193 (294)
Q Consensus       174 --~~~~~~~~~-gv~r~V~vSs~  193 (294)
                        .+..+.... .-.+++.++..
T Consensus       198 ~~~~~~~~~~l~~~G~iv~~G~~  220 (280)
T TIGR03366       198 TAAVRACLESLDVGGTAVLAGSV  220 (280)
T ss_pred             hHHHHHHHHHhcCCCEEEEeccC
Confidence              222222211 23578888754

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=94.79  E-value=0.21  Score=46.64  Aligned_cols=89  Identities=16%  Similarity=0.127  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEEcCccchhhh-cCC-CcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMES-FGT-YVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~R~~~~~~~~-~~~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ..++|.|.||||++|+++++.|.++.   .++..+....+..... +.. .+.+-  ++.   .  ..+.++|++|.+.+
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~~~~v~--~~~---~--~~~~~~Dvvf~a~p   75 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGKSVTVQ--DAA---E--FDWSQAQLAFFVAG   75 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCcceEEE--eCc---h--hhccCCCEEEECCC
Confidence            45799999999999999999999853   4666665443221111 111 11111  221   1  23468999999843


Q ss_pred             -ch---HHhhhhhcCCCEEEEecccc
Q 022625          173 -GF---ISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       173 -~~---~~~~~~~~gv~r~V~vSs~~  194 (294)
                       +.   +...+.+.|+ ++|=.|+..
T Consensus        76 ~~~s~~~~~~~~~~g~-~VIDlS~~f  100 (336)
T PRK08040         76 REASAAYAEEATNAGC-LVIDSSGLF  100 (336)
T ss_pred             HHHHHHHHHHHHHCCC-EEEECChHh
Confidence             22   2233334454 466666654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	294
1xq6_A	253	X-ray Structure Of Gene Product From Arabidopsis Th		2e-04

>pdb|1XQ6|A Chain A, X-ray Structure Of Gene Product From Arabidopsis Thaliana At5g02240 Length = 253

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 177 NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236
           +A  + GV+H++++  +        +  L  GN      + E  L  SG PYTIIR G L
Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGL 177
Query: 237 QNTPGGKQ----GFQFEEGCAANGSLSKEDAAFICVEAL 271
            +  GG +    G   E       ++ + D A +C++AL
Sbjct: 178 LDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQAL 216

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	294
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	3e-15
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-14
1xq6_A	253	Unknown protein; structural genomics, protein stru	3e-14
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-13
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	2e-12
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	1e-09
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	2e-08
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	2e-08
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	5e-08
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	8e-08
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	5e-05
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	8e-05
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	5e-04

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 72.5 bits (178), Expect = 3e-15
 Identities = 34/209 (16%), Positives = 64/209 (30%), Gaps = 17/209 (8%)

Query: 82  GSNEEDEEKEDEFPEEARDA----VLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA 136
           GS+                     VL+      I + VI  L  K+  +     +     
Sbjct: 2   GSSHHHHHHSSGRENLYFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI 61

Query: 137 MESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF--------ISNAGSLKGVQHVI 188
            + + T  + + GD  N   LK A++G   +     G         +  A     V+ +I
Sbjct: 62  HKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLI 121

Query: 189 LLSQLSVYRGSGGIQALMKGNARKLAEQD----ESMLMASGIPYTIIRTGVLQNTPGGKQ 244
            +  L +Y    G              +        + ASG+ YTI+R   L +      
Sbjct: 122 FVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDY 181

Query: 245 GFQFEEGCAANGSLSKEDAAFICVEALES 273
                        +S++  A +  + ++ 
Sbjct: 182 ELTSRNEPFKGTIVSRKSVAALITDIIDK 210

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 70.0 bits (172), Expect = 1e-14
 Identities = 22/179 (12%), Positives = 50/179 (27%), Gaps = 18/179 (10%)

Query: 111 IGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170
            G   +   +     +  LV+D              + GD      +   + G  ++I  
Sbjct: 15  TGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIV- 73

Query: 171 SEGFISNAGSLK----------------GVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214
             G  ++                     GV  V+  +   +      +   ++       
Sbjct: 74  LLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI 133

Query: 215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES 273
              + +L  SG+ Y  +    + + P         +G   +  +SK D     +  L +
Sbjct: 134 RMHK-VLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTT 191

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 70.3 bits (172), Expect = 3e-14
 Identities = 48/227 (21%), Positives = 81/227 (35%), Gaps = 48/227 (21%)

Query: 102 VLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT 159
           VLVT      GQ+V   L     +   K LV+  +   E  G   +   GD ++   +  
Sbjct: 7   VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-EKIGGEADVFIGDITDADSINP 65

Query: 160 ALRGVRSIIC-------PSEGFISNAGSLK----------------------------GV 184
           A +G+ +++           GF    G                               GV
Sbjct: 66  AFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV 125

Query: 185 QHVILLSQLSVYRGSGGIQALMKGN---ARKLAEQDESMLMASGIPYTIIRTGVLQNTPG 241
           +H++++  +        +  L  GN    ++ AEQ    L  SG PYTIIR G L +  G
Sbjct: 126 KHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQ---YLADSGTPYTIIRAGGLLDKEG 182

Query: 242 GKQGFQFEEG----CAANGSLSKEDAAFICVEALESIPQTGLIFEVC 284
           G +     +          ++ + D A +C++AL         F++ 
Sbjct: 183 GVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLG 229

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 67.8 bits (166), Expect = 1e-13
 Identities = 42/238 (17%), Positives = 79/238 (33%), Gaps = 31/238 (13%)

Query: 82  GSNEEDEEKEDEFPEEARDA--VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES 139
           GS+                   VLV   +  + + ++  L  K     A+V+++    E 
Sbjct: 2   GSSHHHHHHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL 61

Query: 140 FGTYVESMAGDASNKKFLKTALRGVRSIIC-----PSEGFIS-------------NAGSL 181
                  +      +     A   + +++      P  G                     
Sbjct: 62  RERGASDIVVANLEED-FSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEK 120

Query: 182 KGVQHVILLSQLSVYRGSGGIQALMK-GNARKLAEQDESMLMASGIPYTIIRTGVLQNTP 240
           +G++  I++S +       G   +     A++LA+     L  S + YTI+R G L N  
Sbjct: 121 RGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADD---ELKRSSLDYTIVRPGPLSNEE 177

Query: 241 GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQT-GLIFEVC----EISNLCEQL 293
              +            S+++ D A +  E ++    T G  FEV      I+ + EQL
Sbjct: 178 STGKVTVSPHFSEITRSITRHDVAKVIAELVDQ-QHTIGKTFEVLNGDTPIAKVVEQL 234

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 64.3 bits (156), Expect = 2e-12
 Identities = 31/203 (15%), Positives = 63/203 (31%), Gaps = 16/203 (7%)

Query: 102 VLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT---YVESMAGDASNKKFL 157
           + +      I Q +  +L+      I    +  +  +         V  + G   N   L
Sbjct: 8   ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXL 67

Query: 158 KTALRGVRSIICPSEGFISNAGSL------KGVQHVILLSQLSVY-RGSGGIQALMKGNA 210
           + A+     +   +    S+  S+        ++ VI +S   +       ++     N 
Sbjct: 68  EQAVTNAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNL 127

Query: 211 RKLAEQD----ESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCA-ANGSLSKEDAAF 265
                Q      ++L  S + YTI+R   L N P         EG    +  +S+E    
Sbjct: 128 PISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDYELIPEGAQFNDAQVSREAVVK 187

Query: 266 ICVEALESIPQTGLIFEVCEISN 288
              + L +  +T        +  
Sbjct: 188 AIFDILHAADETPFHRTSIGVGE 210

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 24/155 (15%), Positives = 49/155 (31%), Gaps = 23/155 (14%)

Query: 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 160
           +++T     +G  +    I          V++     + +   V     D  N++ +  A
Sbjct: 3   IMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEA 62

Query: 161 LRGVRS--IICPSEG-----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK 207
            +G+ +   I                 +  A    GV H+I +   +    +    +   
Sbjct: 63  FKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQ-SGVAHIIFIGYYADQHNNPFHMSPYF 121

Query: 208 GNARKLAEQDESMLMASGIPYTIIRTGV-LQNTPG 241
           G A         +L  SGI YT +R  + +     
Sbjct: 122 GYA-------SRLLSTSGIDYTYVRMAMYMDPLKP 149

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 36/193 (18%), Positives = 62/193 (32%), Gaps = 32/193 (16%)

Query: 102 VLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT 159
           + VT     +G +VI  L+  V  ++I A+V++   A       VE   GD +  + L+ 
Sbjct: 3   IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQK 62

Query: 160 ALRGVRS--IICPSEG-----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALM 206
           A  GV     I                 +  A    GV+H+              +  + 
Sbjct: 63  AFAGVSKLLFISGPHYDNTLLIVQHANVV-KAARDAGVKHIAYTGYAFAEESIIPLAHVH 121

Query: 207 KGNARKLAEQDESMLMASGIPYTIIRTGV-LQNTPGGKQGFQFEEG----CAANGSLS-- 259
                      E  +  + IPYT +R  +              E G     A +G ++  
Sbjct: 122 LAT--------EYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSV 173

Query: 260 -KEDAAFICVEAL 271
            + + A      L
Sbjct: 174 TRNELALAAATVL 186

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 23/154 (14%)

Query: 102 VLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT 159
           + +T     +G  VI SL+  V  ++I A+V++   A       +     D  ++  L +
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTS 61

Query: 160 ALRGVRS--IICPSEG---------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208
           AL+GV    +I  SE           I+ A +  GV+ +   S L       G+      
Sbjct: 62  ALQGVEKLLLISSSEVGQRAPQHRNVINAAKAA-GVKFIAYTSLLHADTSPLGLADEHIE 120

Query: 209 NARKLAEQDESMLMASGIPYTIIRTGV-LQNTPG 241
                    E ML  SGI YT++R G   +N   
Sbjct: 121 T--------EKMLADSGIVYTLLRNGWYSENYLA 146

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 51.5 bits (124), Expect = 5e-08
 Identities = 32/203 (15%), Positives = 65/203 (32%), Gaps = 27/203 (13%)

Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-NKKFLKTA 160
           + +      +G+ ++ SL     +I A  +      +     V+++  D     + +   
Sbjct: 3   IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNN--VKAVHFDVDWTPEEMAKQ 60

Query: 161 LRGVRSIIC----PSEGFIS----------NAGSLKGVQHVILLSQLSVYRGSGGIQALM 206
           L G+ +II       +  +            A     V+  ILLS +   +    I A  
Sbjct: 61  LHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGF 120

Query: 207 KGNARKL---AEQDESMLMASGIPYTIIRTGVLQNTPG-GKQGFQFEEGCAANGSLSKED 262
                        D  +   + + YTII+ G L      G      +     + S +  D
Sbjct: 121 DALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEEATGL----IDINDEVSASNTIGD 176

Query: 263 AAFICVEALESIPQT-GLIFEVC 284
            A    E + +   + G +  + 
Sbjct: 177 VADTIKELVMT-DHSIGKVISMH 198

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 51.6 bits (124), Expect = 8e-08
 Identities = 26/168 (15%), Positives = 62/168 (36%), Gaps = 21/168 (12%)

Query: 102 VLVTDGDSDIGQMVILSLI-VKRTRIKALVKD--KRNAMESFGTYVESMAGDASNKKFLK 158
           V+V  G    G  V  +L+     +++ + ++  K+ A E      E + GD  ++  ++
Sbjct: 8   VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIME 67

Query: 159 TALRGVRSIICPSEGF--------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQA 204
            AL G  +    +  +              +++     G+ +V+     ++ + + G  A
Sbjct: 68  LALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLA 127

Query: 205 LMKGNARKLAEQDESMLMASGIPYTIIRTGV-LQNTPGGKQGFQFEEG 251
               + +   E+        G+P T +R     +N        +  +G
Sbjct: 128 AAHFDGKGEVEE---YFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDG 172

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 43.0 bits (101), Expect = 5e-05
 Identities = 26/151 (17%), Positives = 59/151 (39%), Gaps = 20/151 (13%)

Query: 102 VLVTDGDSDIGQMVILSLI---------VKRTRIKALVKDKRNAMESFGTY-VESMAGDA 151
           +L+      IG+ ++ + I         V++T   A  + K   ++++ +  V  + GD 
Sbjct: 5   ILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDI 64

Query: 152 SNKKFLKTALRGVRSIIC-------PSEGFISNAGSLKGVQHVILLSQLSV-YRGSGGIQ 203
           ++ + L  A++ V  +IC         +  I  A    G       S+  +       ++
Sbjct: 65  NDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVE 124

Query: 204 ALMKGNARKLAEQDESMLMASGIPYTIIRTG 234
            + +    K + +    + A G+PYT +   
Sbjct: 125 PVRQVFEEKASIRRV--IEAEGVPYTYLCCH 153

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 42.6 bits (100), Expect = 8e-05
 Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 19/150 (12%)

Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALV--------KDKRNAMESFGTY-VESMAGDAS 152
           +L+      IG+ V  + +        LV         +K   +ESF       + G   
Sbjct: 7   ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSID 66

Query: 153 NKKFLKTALRGVRSIIC-------PSEGFISNAGSLKGVQHVILLSQLSV-YRGSGGIQA 204
           +   L  A++ V  +I         S+  I  A    G       S+          ++ 
Sbjct: 67  DHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEP 126

Query: 205 LMKGNARKLAEQDESMLMASGIPYTIIRTG 234
                  K   +    + A GIPYT + + 
Sbjct: 127 AKSVFEVKAKVRRA--IEAEGIPYTYVSSN 154

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 40.3 bits (94), Expect = 5e-04
 Identities = 25/152 (16%), Positives = 45/152 (29%), Gaps = 19/152 (12%)

Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALV-------KDKRNAMESFGTY-VESMAGDASN 153
           VL+  G   IG+ ++ + I        L         DK   +  F     + +     +
Sbjct: 7   VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD 66

Query: 154 KKFLKTALRGVRSIICPSEGFIS-----------NAGSLKGVQHVILLSQLSVYRGSGGI 202
            + L  AL+ V  +I    G +             A    G     L S+  +       
Sbjct: 67  HQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEH 126

Query: 203 QALMKGNARKLAEQDESMLMASGIPYTIIRTG 234
                        +    + A+ IPYT + + 
Sbjct: 127 ALQPGSITFIDKRKVRRAIEAASIPYTYVSSN 158

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	294
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.95
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.95
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.94
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.94
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.94
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.93
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.93
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.93
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.93
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.93
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.93
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.92
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.92
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.92
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.92
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.92
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.92
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.91
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.91
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.91
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.91
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.9
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.9
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.9
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.9
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.9
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.9
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.9
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.9
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.9
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.9
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.89
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.89
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.89
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.89
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.89
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.89
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.89
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.89
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.89
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.89
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.89
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.89
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.89
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.89
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.89
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.88
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.88
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.88
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.88
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.88
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.87
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.87
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.87
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.87
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.87
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.87
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.87
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.87
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.87
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.87
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.86
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.86
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.86
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.86
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.86
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.86
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.86
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.86
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.86
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.86
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.86
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.86
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.85
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.85
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.85
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.85
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.85
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.84
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.84
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.84
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.84
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.84
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.84
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.83
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.83
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.83
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.83
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.83
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.83
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.83
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.82
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.82
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.82
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.82
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.82
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.82
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.82
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.81
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.81
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.81
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.81
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.81
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.81
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.81
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.81
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.81
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.81
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.81
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.81
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.81
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.81
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.81
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.8
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.8
1spx_A	278	Short-chain reductase family member (5L265); paral	99.8
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.8
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.8
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.8
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.8
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.8
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.8
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.8
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.8
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.8
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.8
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.8
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.8
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.8
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.8
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.8
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.8
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.8
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.8
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.8
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.8
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.8
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.8
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.8
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.8
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.8
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.79
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.79
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.79
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.79
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.79
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.79
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.79
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.79
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.79
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.79
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.79
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.79
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.79
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.79
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.79
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.79
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.79
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.79
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.79
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.78
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.78
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.78
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.78
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.78
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.78
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.78
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.78
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.78
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.78
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.78
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.78
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.78
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.78
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.78
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.78
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.78
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.78
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.78
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.78
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.78
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.77
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.77
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.77
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.77
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.77
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.77
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.77
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.77
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.77
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.77
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.77
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.77
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.77
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.77
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.77
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.77
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.77
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.76
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.76
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.76
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.76
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.76
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.76
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.76
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.76
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.76
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.76
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.75
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.75
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.75
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.75
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.75
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.75
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.75
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.75
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.75
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.75
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.75
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.75
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.75
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.75
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.75
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.75
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.75
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.75
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.75
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.74
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.74
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.74
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.74
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.74
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.74
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.74
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.73
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.73
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.73
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.73
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.73
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.73
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.73
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.73
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.73
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.73
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.73
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.73
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.73
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.72
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.72
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.72
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.72
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.72
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.72
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.72
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.72
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.72
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.71
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.71
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.71
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.71
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.71
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.71
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.71
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.71
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.71
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.7
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.7
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.7
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.7
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.7
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.7
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.69
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.69
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.69
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.69
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.69
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.69
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.69
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.69
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.69
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.69
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.68
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.67
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.67
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.67
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.67
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.64
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.64
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.62
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.61
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.6
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.6
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.6
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.59
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.59
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.47
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.46
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.44
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.41
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.4
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.35
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.33
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.33
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.28
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.23
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.15
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.11
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.11
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.1
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.05
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.99
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.98
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.92
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.88
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.82
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.75
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.73
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.7
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.68
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.6
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.58
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.54
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.53
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.49
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.47
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.42
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.4
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.38
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.28
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.24
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.21
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.13
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.04
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.04
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.04
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	98.01
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.99
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.92
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.86
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.86
1lnq_A	336	MTHK channels, potassium channel related protein;	97.79
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.79
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.76
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.75
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.72
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.68
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.68
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.62
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.6
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.58
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.55
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.53
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.5
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.49
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.44
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.44
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.42
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.39
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.39
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.38
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.37
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.37
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.37
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.35
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.33
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.33
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.31
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.3
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.3
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.28
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.25
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.22
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.19
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.15
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.15
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.13
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.11
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.1
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.08
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.05
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.04
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	97.03
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.01
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.01
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.0
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.99
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	96.97
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.96
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.95
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	96.94
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.93
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.88
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	96.88
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.87
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.85
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.83
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.82
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.81
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.8
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.79
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.77
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.77
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	96.75
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	96.75
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.74
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.73
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.73
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.71
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.7
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.7
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.67
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.67
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.66
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.66
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.65
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.6
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.59
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.59
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	96.57
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.56
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	96.56
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	96.54
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.54
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.53
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.52
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.52
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.51
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.5
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.48
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.46
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.46
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.45
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	96.44
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.44
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	96.44
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.44
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.43
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	96.42
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.42
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.42
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.42
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.41
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.4
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.4
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.39
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	96.38
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	96.38
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.37
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.34
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	96.33
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.33
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	96.32
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	96.32
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.31
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.29
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.28
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.27
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.24
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.23
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.23
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.22
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.21
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.21
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.2
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	96.19
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	96.19
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	96.18
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.16
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.16
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	96.16
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.16
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.15
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.14
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.14
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	96.13
1kyq_A	274	Met8P, siroheme biosynthesis protein Met8; homodim	96.13
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.11
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.11
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.09
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.08
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.07
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.05
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	96.05
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.04
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	96.04
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.03
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.03
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	96.03
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.02
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	96.01
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.01
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.0
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	95.99
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	95.98
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	95.96
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.95
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	95.92

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.95  E-value=1.8e-27  Score=205.69  Aligned_cols=189  Identities=16%  Similarity=0.144  Sum_probs=151.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCC-HHHHHHHhcCCcEEEEcCCc-----
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSEG-----  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d-~~~l~~~l~~~d~Vi~~~~~-----  173 (294)
                      |+|+||||+|+||++++++|+++|++|++++|++++....  .+++++.+|++| .+++.++++++|+|||+.+.     
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~   78 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSL   78 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCc
Confidence            5899999999999999999999999999999998776543  579999999999 99999999999999998321     


Q ss_pred             ---------hHHhhhhhcCCCEEEEecccccccCCCCc-hhcc-chhHHHHHHHHHHHH-HhCCCCEEEEEccceecCCC
Q 022625          174 ---------FISNAGSLKGVQHVILLSQLSVYRGSGGI-QALM-KGNARKLAEQDESML-MASGIPYTIIRTGVLQNTPG  241 (294)
Q Consensus       174 ---------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~-~~~~-~~~~~~~~~~ae~~l-~~~gl~~tivRPg~l~~~~~  241 (294)
                               .+.+++++.+++|||++||..++.+.... .+.. ...+...|..+|.++ +..+++|++|||+.+++...
T Consensus        79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilrp~~v~g~~~  158 (219)
T 3dqp_A           79 LKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEEA  158 (219)
T ss_dssp             CCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEEECSEECSCC
T ss_pred             EeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHhccCCcEEEEeCceEecCCC
Confidence                     26677888899999999998776543220 0000 111223456788888 77899999999999984433


Q ss_pred             CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCcccccc
Q 022625          242 GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       242 ~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~~~~ei  293 (294)
                      .+. ..  .+.....+++++|+|++++.++.++...+++|++.+++.+++|+
T Consensus       159 ~~~-~~--~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~~~~~e~  207 (219)
T 3dqp_A          159 TGL-ID--INDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGKTAIKEA  207 (219)
T ss_dssp             CSE-EE--ESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECSEEHHHH
T ss_pred             CCc-cc--cCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCCccHHHH
Confidence            322 22  35677889999999999999999987779999999999888875

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.95  E-value=3.3e-27  Score=206.31  Aligned_cols=196  Identities=15%  Similarity=0.169  Sum_probs=151.9

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCc-EEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v-~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ...+.+|+|+||||+|+||++++++|+++|++|++++|++++.......++ +++.+|++  +.+.+++.++|+|||+.+
T Consensus        16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag   93 (236)
T 3e8x_A           16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASIDAVVFAAG   93 (236)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCC
T ss_pred             ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCCCEEEECCC
Confidence            456678999999999999999999999999999999999988766555578 99999999  778889999999999832


Q ss_pred             c------------------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEcc
Q 022625          173 G------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTG  234 (294)
Q Consensus       173 ~------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg  234 (294)
                      .                  .+.+++++.+++|||++||.++..+...+  .....+...|..+|.+++..++++++||||
T Consensus        94 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~--~~~~~Y~~sK~~~e~~~~~~gi~~~~lrpg  171 (236)
T 3e8x_A           94 SGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGP--MNMRHYLVAKRLADDELKRSSLDYTIVRPG  171 (236)
T ss_dssp             CCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSC--GGGHHHHHHHHHHHHHHHHSSSEEEEEEEC
T ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCh--hhhhhHHHHHHHHHHHHHHCCCCEEEEeCC
Confidence            1                  15567788899999999997765442111  011112234567888899999999999999


Q ss_pred             ceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCcccccc
Q 022625          235 VLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       235 ~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~~~~ei  293 (294)
                      .+++............+.....+++++|+|++++.+++++...+++|++.+++.+++|+
T Consensus       172 ~v~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~~~~~~e~  230 (236)
T 3e8x_A          172 PLSNEESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNGDTPIAKV  230 (236)
T ss_dssp             SEECSCCCSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEECSEEHHHH
T ss_pred             cccCCCCCCeEEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCCCcCHHHH
Confidence            99854443333334444556889999999999999999887889999999998887775

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.95  E-value=1.3e-25  Score=190.86  Aligned_cols=187  Identities=12%  Similarity=0.079  Sum_probs=145.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc-----
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-----  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-----  173 (294)
                      +|+|+||||+|+||++++++|+++|++|++++|++++.......+++++.+|++|.+++.++++++|+|||+.+.     
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   82 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLS   82 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCC
Confidence            389999999999999999999999999999999987765443567999999999999999999999999998321     


Q ss_pred             ----------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecCCCCC
Q 022625          174 ----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK  243 (294)
Q Consensus       174 ----------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~  243 (294)
                                .+.+++++.+++|||++||..++....... .....+...|..+|.++++.++++++|||+.+.+++...
T Consensus        83 ~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-~~~~~y~~~K~~~e~~~~~~~i~~~~lrp~~~~~~~~~~  161 (206)
T 1hdo_A           83 PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-PRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTG  161 (206)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-GGGHHHHHHHHHHHHHHHHTCSEEEEECCSEEECCCCCS
T ss_pred             ccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccccc-ccchhHHHHHHHHHHHHHhCCCCEEEEeCCcccCCCCCc
Confidence                      145667788999999999998775433110 011122234567888888899999999999986554333


Q ss_pred             cceeeccCCCC-CCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 022625          244 QGFQFEEGCAA-NGSLSKEDAAFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       244 ~~~~~~~g~~~-~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                      .... ..+... ..+++++|+|++++.+++++...+++|++.+|.
T Consensus       162 ~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          162 AYTV-TLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY  205 (206)
T ss_dssp             CCEE-ESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred             ceEe-cccCCCCCCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence            2221 112222 588999999999999999887789999999885

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.94  E-value=4.8e-26  Score=199.38  Aligned_cols=194  Identities=18%  Similarity=0.198  Sum_probs=146.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc-
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-  173 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-  173 (294)
                      .+.+|+|+||||+|+||++++++|+++| ++|++++|+++++......+++++.+|++|.+.+.++++++|+|||+.+. 
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~   99 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGE   99 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCST
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Confidence            3457899999999999999999999999 89999999998877666678999999999999999999999999998432 


Q ss_pred             -------hHHhhhhhcCCCEEEEecccccccCCCCchhcc----chhHHHHHHHHHHHHHhCCCCEEEEEccceecCCCC
Q 022625          174 -------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALM----KGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG  242 (294)
Q Consensus       174 -------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~----~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~  242 (294)
                             .+.+++++.+++|||++||..++........+.    .......+..+|.+++..++++++||||++.+.+..
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~~~~~~  179 (236)
T 3qvo_A          100 DLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDII  179 (236)
T ss_dssp             THHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSCSEEEEEEECEEECCSCC
T ss_pred             chhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCCCCEEEEeCCcccCCCCc
Confidence                   156677888999999999998876433211110    011223345678888899999999999999855443


Q ss_pred             CcceeeccCCCC-CCCcCHHHHHHHHHHHhhCCC-CCCcEEEEecCCccc
Q 022625          243 KQGFQFEEGCAA-NGSLSKEDAAFICVEALESIP-QTGLIFEVCEISNLC  290 (294)
Q Consensus       243 ~~~~~~~~g~~~-~~~Is~eDvA~~iv~aL~~~~-~~g~~~~v~~g~~~~  290 (294)
                      .. .....+... ..+++++|+|+++++++.++. ..++.|+++++....
T Consensus       180 ~~-~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~~~  228 (236)
T 3qvo_A          180 DY-ELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGTDG  228 (236)
T ss_dssp             CC-EEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSCCC
T ss_pred             ce-EEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCCCC
Confidence            22 222222222 457899999999999999887 679999999987543

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.94  E-value=7.8e-26  Score=195.93  Aligned_cols=190  Identities=14%  Similarity=0.188  Sum_probs=141.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc-----
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-----  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-----  173 (294)
                      +|+|+||||+|+||++++++|+++|++|++++|++++.... ..+++++.+|++|.+++.++++++|+|||+.+.     
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~   82 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-NEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNP   82 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCCh
Confidence            58999999999999999999999999999999998776433 367999999999999999999999999998321     


Q ss_pred             -----------hHHhhhhhcCCCEEEEecccccccCCCCc----hhccchhH-HHHHHHHH---HHHH-hCCCCEEEEEc
Q 022625          174 -----------FISNAGSLKGVQHVILLSQLSVYRGSGGI----QALMKGNA-RKLAEQDE---SMLM-ASGIPYTIIRT  233 (294)
Q Consensus       174 -----------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~----~~~~~~~~-~~~~~~ae---~~l~-~~gl~~tivRP  233 (294)
                                 .+.+++++.+++|||++||.+++......    .+..+... ...|..+|   ..+. +.+++|+++||
T Consensus        83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp  162 (227)
T 3dhn_A           83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSP  162 (227)
T ss_dssp             -CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEEC
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhccCccEEEEeC
Confidence                       15667888899999999998765322110    00011111 12233444   3333 57899999999


Q ss_pred             cceecCCCCC-cceeec-----cCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCccc
Q 022625          234 GVLQNTPGGK-QGFQFE-----EGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLC  290 (294)
Q Consensus       234 g~l~~~~~~~-~~~~~~-----~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~~~  290 (294)
                      +.++ ++... ......     ......++++++|+|++++.+++++...|++|+++++++..
T Consensus       163 ~~v~-g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~  224 (227)
T 3dhn_A          163 AADM-RPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHH  224 (227)
T ss_dssp             CSEE-ESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC
T ss_pred             Cccc-CCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhcc
Confidence            9987 33211 111111     11223678999999999999999999999999999987654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.94  E-value=6.6e-25  Score=192.08  Aligned_cols=195  Identities=22%  Similarity=0.352  Sum_probs=149.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc--
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG--  173 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~--  173 (294)
                      .+|+|+||||+|+||++++++|+++  |++|++++|++++.... ..+++++.+|++|.+++.++++++|+|||+.+.  
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~   81 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTSAVP   81 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccccc
Confidence            5789999999999999999999999  89999999998765543 457889999999999999999999999998210  


Q ss_pred             ---------------------------------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHH
Q 022625          174 ---------------------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESM  220 (294)
Q Consensus       174 ---------------------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~  220 (294)
                                                       .+.+++++.+++|||++||..++.+..+..+|....+...|..+|.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~  161 (253)
T 1xq6_A           82 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQY  161 (253)
T ss_dssp             EECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHH
T ss_pred             cccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCccccccchhHHHHHHHHHHH
Confidence                                             03445777889999999999876654444444332233346678899


Q ss_pred             HHhCCCCEEEEEccceecCCCCCcceeeccC----CCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC----ccccc
Q 022625          221 LMASGIPYTIIRTGVLQNTPGGKQGFQFEEG----CAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS----NLCEQ  292 (294)
Q Consensus       221 l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g----~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~----~~~~e  292 (294)
                      +++.++++++|||+.+++.............    .....+++++|+|++++.++.++...+++|++.+++    .++.|
T Consensus       162 ~~~~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e  241 (253)
T 1xq6_A          162 LADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKD  241 (253)
T ss_dssp             HHTSSSCEEEEEECEEECSCSSSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCC
T ss_pred             HHhCCCceEEEecceeecCCcchhhhhccCCcCCcCCCCcEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHH
Confidence            9999999999999998843322111111111    113458999999999999998876678999999975    46666


Q ss_pred             c
Q 022625          293 L  293 (294)
Q Consensus       293 i  293 (294)
                      +
T Consensus       242 ~  242 (253)
T 1xq6_A          242 F  242 (253)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.93  E-value=7.7e-25  Score=189.10  Aligned_cols=185  Identities=11%  Similarity=0.085  Sum_probs=136.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc------
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~------  173 (294)
                      |+|+||||+|+||++++++|+++|++|++++|++++.......+++++.+|++|.+.  +.+.++|+|||+.+.      
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~   78 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGR   78 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH--hhcccCCEEEECCccCCCcch
Confidence            579999999999999999999999999999999988777666789999999999877  889999999998322      


Q ss_pred             ---------hHHhhhhhcCCCEEEEecccccccCCCC----ch--hcc---chhHHHHHHHHHH---HHHhCCCCEEEEE
Q 022625          174 ---------FISNAGSLKGVQHVILLSQLSVYRGSGG----IQ--ALM---KGNARKLAEQDES---MLMASGIPYTIIR  232 (294)
Q Consensus       174 ---------~~~~~~~~~gv~r~V~vSs~~~~~~~~~----~~--~~~---~~~~~~~~~~ae~---~l~~~gl~~tivR  232 (294)
                               .+.+++++.+ +|||++||.+++.....    ..  +..   ...+...|..+|.   +.++++++|++||
T Consensus        79 ~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~i~~~ivr  157 (224)
T 3h2s_A           79 GYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGIS  157 (224)
T ss_dssp             THHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcCCCcEEEEc
Confidence                     1566778888 99999999865432211    00  000   0111112223332   2346899999999


Q ss_pred             ccceecCCCCCcceee-----ccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCc
Q 022625          233 TGVLQNTPGGKQGFQF-----EEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISN  288 (294)
Q Consensus       233 Pg~l~~~~~~~~~~~~-----~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~  288 (294)
                      |+.+++ ++.......     ..+.....+++++|+|++++.+++++...+++|++++-++
T Consensus       158 p~~v~g-~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~  217 (224)
T 3h2s_A          158 PSEAFP-SGPATSYVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADL  217 (224)
T ss_dssp             ECSBCC-CCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC-
T ss_pred             CccccC-CCcccCceecccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcc
Confidence            999883 332222211     2234456789999999999999999999999999998654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.93  E-value=2.1e-24  Score=186.65  Aligned_cols=190  Identities=17%  Similarity=0.113  Sum_probs=146.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEEcCcc-chhhh--cCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc-
Q 022625           99 RDAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKR-NAMES--FGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~-~~g~~V~~~~R~~~-~~~~~--~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-  173 (294)
                      +|+|+||||+|+||++++++|+ ++|++|++++|+++ ++.+.  ...+++++.+|++|.+++.++++++|+|||+.+. 
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~   84 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES   84 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence            4669999999999999999999 89999999999988 76654  4568999999999999999999999999999543 


Q ss_pred             -----hHHhhhhhcCCCEEEEecccccccCCCCchhc----cch-hHHHHHHHHHHHHHhCCCCEEEEEccceecCCCCC
Q 022625          174 -----FISNAGSLKGVQHVILLSQLSVYRGSGGIQAL----MKG-NARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK  243 (294)
Q Consensus       174 -----~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~----~~~-~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~  243 (294)
                           .+.+++++.+++|||++||..++.........    ... .+...|..+|.++++.+++|++||||++++.+...
T Consensus        85 n~~~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~v~~~~~~~  164 (221)
T 3r6d_A           85 GSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXT  164 (221)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEECEEECCTTCC
T ss_pred             ChhHHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEEEechhhcCCCCCc
Confidence                 25667788899999999999887643322100    000 22334667888999999999999999998553333


Q ss_pred             cceeeccCCC-CCCCcCHHHHHHHHHHHh--hCCC-CCCcEEEEecCCc
Q 022625          244 QGFQFEEGCA-ANGSLSKEDAAFICVEAL--ESIP-QTGLIFEVCEISN  288 (294)
Q Consensus       244 ~~~~~~~g~~-~~~~Is~eDvA~~iv~aL--~~~~-~~g~~~~v~~g~~  288 (294)
                      .......+.. ...+++++|+|+++++++  .++. ..++.+.+.++..
T Consensus       165 ~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~~  213 (221)
T 3r6d_A          165 DYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPGT  213 (221)
T ss_dssp             CCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTTC
T ss_pred             ceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCCC
Confidence            2222222222 234799999999999999  7776 5688999986653

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.93  E-value=5.7e-25  Score=189.15  Aligned_cols=186  Identities=12%  Similarity=0.152  Sum_probs=128.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc------
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~------  173 (294)
                      |+|+||||+|+||++++++|+++|++|++++|++++..... .+++++.+|++|.+.  +.+.++|+|||+.+.      
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~   77 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEAE   77 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTTT
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh--hhhcCCCEEEECCcCCccccc
Confidence            58999999999999999999999999999999998776544 679999999999877  788999999998321      


Q ss_pred             -------hHHhhhhhcCCCEEEEecccccccCCCC------------chhccchhHHHHHHHHHHHHH--hCCCCEEEEE
Q 022625          174 -------FISNAGSLKGVQHVILLSQLSVYRGSGG------------IQALMKGNARKLAEQDESMLM--ASGIPYTIIR  232 (294)
Q Consensus       174 -------~~~~~~~~~gv~r~V~vSs~~~~~~~~~------------~~~~~~~~~~~~~~~ae~~l~--~~gl~~tivR  232 (294)
                             .+.+++++.+++|||++||..++.....            ...|...+.  .. +.+..+.  .++++|++||
T Consensus        78 ~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~--~~-e~~~~~~~~~~gi~~~ivr  154 (221)
T 3ew7_A           78 KHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARA--QA-KQLEHLKSHQAEFSWTYIS  154 (221)
T ss_dssp             SHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHH--HH-HHHHHHHTTTTTSCEEEEE
T ss_pred             hHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHH--HH-HHHHHHHhhccCccEEEEe
Confidence                   2566788888999999999876432211            111222211  11 1223355  6899999999


Q ss_pred             ccceecCCCCCcc-ee-----eccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCccccc
Q 022625          233 TGVLQNTPGGKQG-FQ-----FEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLCEQ  292 (294)
Q Consensus       233 Pg~l~~~~~~~~~-~~-----~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~~~~e  292 (294)
                      |+.+++ ++.... +.     +........+++++|+|++++.+++++...+++|++++..+..++
T Consensus       155 p~~v~g-~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~~  219 (221)
T 3ew7_A          155 PSAMFE-PGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHHH  219 (221)
T ss_dssp             CSSCCC-CC---------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC-------
T ss_pred             Ccceec-CCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEEEECCCCccccc
Confidence            999883 321111 11     111122346899999999999999999999999999998766553

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.93  E-value=3.5e-25  Score=198.22  Aligned_cols=186  Identities=19%  Similarity=0.253  Sum_probs=147.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc----
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~----  173 (294)
                      |+|+||||+|+||++++++|+++  |++|++++|++++.......+++++.+|++|.+++.++++++|+|||+++.    
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~   80 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN   80 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence            57999999999999999999999  999999999987665444457899999999999999999999999998431    


Q ss_pred             --------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecCC-CC--
Q 022625          174 --------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTP-GG--  242 (294)
Q Consensus       174 --------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~-~~--  242 (294)
                              .+.+++++.+++|||++||..++..+   ..|     ...|..+|.++++.+++++++||+.+++.. ..  
T Consensus        81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~---~~y-----~~~K~~~E~~~~~~~~~~~ilrp~~~~~~~~~~~~  152 (287)
T 2jl1_A           81 TLLIVQHANVVKAARDAGVKHIAYTGYAFAEESI---IPL-----AHVHLATEYAIRTTNIPYTFLRNALYTDFFVNEGL  152 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGCC---STH-----HHHHHHHHHHHHHTTCCEEEEEECCBHHHHSSGGG
T ss_pred             hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCC---Cch-----HHHHHHHHHHHHHcCCCeEEEECCEeccccchhhH
Confidence                    15567888899999999998876322   122     223567888898899999999999877422 10  


Q ss_pred             -----CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecC-Ccccccc
Q 022625          243 -----KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEI-SNLCEQL  293 (294)
Q Consensus       243 -----~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g-~~~~~ei  293 (294)
                           .....++.++....+++++|+|++++.++.++...+++|+++++ ..+.+|+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~  209 (287)
T 2jl1_A          153 RASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDEL  209 (287)
T ss_dssp             HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHH
T ss_pred             HHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHH
Confidence                 11122445667789999999999999999887677899999988 5566654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.93  E-value=3e-25  Score=199.19  Aligned_cols=187  Identities=14%  Similarity=0.196  Sum_probs=146.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc-----
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-----  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-----  173 (294)
                      |+|+||||||+||++++++|+++ |++|++++|++++.......+++++.+|++|.+++.++++++|+|||+.+.     
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~   80 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSF   80 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHH
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccch
Confidence            57999999999999999999998 999999999998876666678999999999999999999999999998331     


Q ss_pred             -------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecCCC-----
Q 022625          174 -------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG-----  241 (294)
Q Consensus       174 -------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~-----  241 (294)
                             .+.+++++.|++|||++||.+.....    ++...   .+...+|..+++++++|++|||+.+++...     
T Consensus        81 ~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~----~~~~~---~~~~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~  153 (289)
T 3e48_A           81 KRIPEVENLVYAAKQSGVAHIIFIGYYADQHNN----PFHMS---PYFGYASRLLSTSGIDYTYVRMAMYMDPLKPYLPE  153 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTC----CSTTH---HHHHHHHHHHHHHCCEEEEEEECEESTTHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCC----CCccc---hhHHHHHHHHHHcCCCEEEEeccccccccHHHHHH
Confidence                   25677888999999999996543221    11111   123467888888999999999999884211     


Q ss_pred             --CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCcccccc
Q 022625          242 --GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       242 --~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~~~~ei  293 (294)
                        ......++.++...++++++|+|++++.++.++...+++|++++...+..|+
T Consensus       154 ~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~s~~e~  207 (289)
T 3e48_A          154 LMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGYSYDMKEL  207 (289)
T ss_dssp             HHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEECCEEEEHHHH
T ss_pred             HHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeCCCcCCHHHH
Confidence              1112334456667789999999999999999987779999999334454443

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.93  E-value=1.1e-24  Score=200.50  Aligned_cols=197  Identities=12%  Similarity=0.008  Sum_probs=144.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh----cC-------CCcEEeecCCCCHHHHHHHhcCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----FG-------TYVESMAGDASNKKFLKTALRGV  164 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~~-------~~v~~v~~D~~d~~~l~~~l~~~  164 (294)
                      .+.+|+||||||+|+||++++++|+++|++|++++|+.......    ..       .+++++.+|++|.+.+.++++++
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV  101 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence            44679999999999999999999999999999999976532211    10       57899999999999999999999


Q ss_pred             cEEEEcCCc----------------------hHHhhhhhcCCCEEEEecccccccCCCC--ch---hccc-hhHHHHHHH
Q 022625          165 RSIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ---ALMK-GNARKLAEQ  216 (294)
Q Consensus       165 d~Vi~~~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~---~~~~-~~~~~~~~~  216 (294)
                      |+|||+++.                      .+.+++++.+++||||+||..++.....  ..   +..+ ..+...|..
T Consensus       102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~  181 (351)
T 3ruf_A          102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYV  181 (351)
T ss_dssp             SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHH
T ss_pred             CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHH
Confidence            999998431                      1556778889999999999988754321  00   0001 111123445


Q ss_pred             HHHHHH----hCCCCEEEEEccceecCCCCC--------------------cceeeccCCCCCCCcCHHHHHHHHHHHhh
Q 022625          217 DESMLM----ASGIPYTIIRTGVLQNTPGGK--------------------QGFQFEEGCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       217 ae~~l~----~~gl~~tivRPg~l~~~~~~~--------------------~~~~~~~g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                      +|.+++    +.+++++++||+.++ +++..                    ....++.+....++++++|+|++++.++.
T Consensus       182 ~E~~~~~~~~~~g~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~  260 (351)
T 3ruf_A          182 NEIYAQVYARTYGFKTIGLRYFNVF-GRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSAL  260 (351)
T ss_dssp             HHHHHHHHHHHHCCCCEEEEECSEE-STTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCCCEEEEeeCcee-CcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHh
Confidence            555544    469999999999988 44321                    11223456677899999999999999998


Q ss_pred             C-CCCCCcEEEEecCC-cccccc
Q 022625          273 S-IPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       273 ~-~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      . +...+++||+++++ .+++|+
T Consensus       261 ~~~~~~~~~~ni~~~~~~s~~e~  283 (351)
T 3ruf_A          261 AKDSAKDNIYNVAVGDRTTLNEL  283 (351)
T ss_dssp             CCGGGCSEEEEESCSCCEEHHHH
T ss_pred             hccccCCCEEEeCCCCcccHHHH
Confidence            7 45678999999875 455443

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.92  E-value=1.3e-24  Score=201.76  Aligned_cols=197  Identities=14%  Similarity=0.146  Sum_probs=147.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCccchhhhcC-CCcEEeecCCC-CHHHHHHHhcCCcEEEEcC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDAS-NKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~-d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+.+|+||||||+|+||++|+++|+++ |++|++++|+.++...... .+++++.+|++ |.+.+.++++++|+|||++
T Consensus        20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A   99 (372)
T 3slg_A           20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLV   99 (372)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECB
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcC
Confidence            3456799999999999999999999998 9999999999877655443 58999999999 9999999999999999972


Q ss_pred             C--c--------------------hHHhhhhhcCCCEEEEecccccccCCCC--chhc----------cch-hHHHHHHH
Q 022625          172 E--G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQAL----------MKG-NARKLAEQ  216 (294)
Q Consensus       172 ~--~--------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~~~----------~~~-~~~~~~~~  216 (294)
                      +  .                    .+.+++++.+ +||||+||..+|.....  ....          .+. .+...|..
T Consensus       100 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~  178 (372)
T 3slg_A          100 AIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQL  178 (372)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHH
T ss_pred             ccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHH
Confidence            2  0                    1556778888 99999999888764221  1000          011 12234556


Q ss_pred             HHHHHHhC---CCCEEEEEccceecCCCCC-----------------------cc-eeeccCCCCCCCcCHHHHHHHHHH
Q 022625          217 DESMLMAS---GIPYTIIRTGVLQNTPGGK-----------------------QG-FQFEEGCAANGSLSKEDAAFICVE  269 (294)
Q Consensus       217 ae~~l~~~---gl~~tivRPg~l~~~~~~~-----------------------~~-~~~~~g~~~~~~Is~eDvA~~iv~  269 (294)
                      +|.+++..   +++++++||+.++ +++..                       .. ..++.+....++++++|+|++++.
T Consensus       179 ~E~~~~~~~~~g~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~  257 (372)
T 3slg_A          179 MDRVIWGYGMEGLNFTLFRPFNWI-GPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMK  257 (372)
T ss_dssp             HHHHHHHHHTTTCEEEEEEECSEE-CSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCEEEEcccccc-CCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHH
Confidence            77777664   9999999999988 44311                       11 122345666789999999999999


Q ss_pred             HhhCCC--CCCcEEEEecC--Ccccccc
Q 022625          270 ALESIP--QTGLIFEVCEI--SNLCEQL  293 (294)
Q Consensus       270 aL~~~~--~~g~~~~v~~g--~~~~~ei  293 (294)
                      +++++.  ..+++|+++++  ..++.|+
T Consensus       258 ~~~~~~~~~~~~~~ni~~~~~~~s~~e~  285 (372)
T 3slg_A          258 IIENSNGVATGKIYNIGNPNNNFSVREL  285 (372)
T ss_dssp             HHHCGGGTTTTEEEEECCTTCEEEHHHH
T ss_pred             HHhcccCcCCCceEEeCCCCCCccHHHH
Confidence            999875  67899999994  5555554

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.92  E-value=1.5e-24  Score=198.60  Aligned_cols=194  Identities=12%  Similarity=0.019  Sum_probs=141.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc----
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----  173 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~----  173 (294)
                      .+|+|+||||+|+||++++++|+++|++|++++|++.+.......+++++.+|++|.+++.++++++|+|||+++.    
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~   91 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSR   91 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-------
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCC
Confidence            3469999999999999999999999999999999987654433347899999999999999999999999998320    


Q ss_pred             ----------------hHHhhhhhcCCCEEEEecccccccCCCC---ch---hcc-----chhHHHHHHHHHHHHHh---
Q 022625          174 ----------------FISNAGSLKGVQHVILLSQLSVYRGSGG---IQ---ALM-----KGNARKLAEQDESMLMA---  223 (294)
Q Consensus       174 ----------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~---~~---~~~-----~~~~~~~~~~ae~~l~~---  223 (294)
                                      .+.+++.+.+++||||+||..++.....   ..   +..     ...+...|..+|.+++.   
T Consensus        92 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~  171 (342)
T 2x4g_A           92 PRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR  171 (342)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhh
Confidence                            1456677789999999999988754322   00   000     11112234456666544   


Q ss_pred             CCCCEEEEEccceecCCCC-C--cce---eecc------CCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCcccc
Q 022625          224 SGIPYTIIRTGVLQNTPGG-K--QGF---QFEE------GCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLCE  291 (294)
Q Consensus       224 ~gl~~tivRPg~l~~~~~~-~--~~~---~~~~------g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~~~~  291 (294)
                      .++++++|||+.++ ++.. .  ...   .+..      ++...++++++|+|++++.+++++.. +++|++++++.++.
T Consensus       172 ~g~~~~ilrp~~v~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-g~~~~v~~~~~s~~  249 (342)
T 2x4g_A          172 NGLPVVIGIPGMVL-GELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRI-GERYLLTGHNLEMA  249 (342)
T ss_dssp             TTCCEEEEEECEEE-CSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCT-TCEEEECCEEEEHH
T ss_pred             cCCcEEEEeCCceE-CCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCC-CceEEEcCCcccHH
Confidence            39999999999988 4432 1  000   0001      33456789999999999999987655 89999999876655


Q ss_pred             cc
Q 022625          292 QL  293 (294)
Q Consensus       292 ei  293 (294)
                      |+
T Consensus       250 e~  251 (342)
T 2x4g_A          250 DL  251 (342)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.92  E-value=7.9e-25  Score=195.62  Aligned_cols=185  Identities=23%  Similarity=0.279  Sum_probs=146.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc-----
Q 022625          101 AVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-----  173 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-----  173 (294)
                      +|+||||+|+||++++++|+++  |++|++++|++++.......+++++.+|++|.+++.++++++|+|||+++.     
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~   80 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQR   80 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchHH
Confidence            5899999999999999999998  999999999987655444457899999999999999999999999998431     


Q ss_pred             -----hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecCCC-------
Q 022625          174 -----FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG-------  241 (294)
Q Consensus       174 -----~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~-------  241 (294)
                           .+.+++++.+++|||++||..++..+   ..|.     ..|..+|.++++++++++++||+.+.+...       
T Consensus        81 ~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~---~~y~-----~sK~~~e~~~~~~~~~~~ilrp~~~~~~~~~~~~~~~  152 (286)
T 2zcu_A           81 APQHRNVINAAKAAGVKFIAYTSLLHADTSP---LGLA-----DEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAAL  152 (286)
T ss_dssp             -CHHHHHHHHHHHHTCCEEEEEEETTTTTCC---STTH-----HHHHHHHHHHHHHCSEEEEEEECCBHHHHHTTHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCEEEEECCCCCCCCc---chhH-----HHHHHHHHHHHHcCCCeEEEeChHHhhhhHHHhHHhh
Confidence                 25677888899999999998876321   2232     235578888888999999999998764211       


Q ss_pred             CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecC-Ccccccc
Q 022625          242 GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEI-SNLCEQL  293 (294)
Q Consensus       242 ~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g-~~~~~ei  293 (294)
                      ......++.++...++++++|+|++++.++.++...+++|+++++ ..+..|+
T Consensus       153 ~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~  205 (286)
T 2zcu_A          153 EHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQL  205 (286)
T ss_dssp             HHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHH
T ss_pred             cCCceeccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHH
Confidence            011123445677788999999999999999987777899999988 5566654

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.92  E-value=2.4e-24  Score=197.96  Aligned_cols=195  Identities=17%  Similarity=0.188  Sum_probs=141.0

Q ss_pred             CCCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        93 ~~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ......+|+||||||+|+||++++++|+++|++|++++|++..      .+++++.+|++|.+.+.++++++|+|||+++
T Consensus        13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~   86 (347)
T 4id9_A           13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGA   86 (347)
T ss_dssp             --------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEECCc
Confidence            4456778999999999999999999999999999999998765      4688999999999999999999999999832


Q ss_pred             c--------------------hHHhhhhhcCCCEEEEecccccccCC--CC--c---hhccchh-HHHHHHHHHHHHH--
Q 022625          173 G--------------------FISNAGSLKGVQHVILLSQLSVYRGS--GG--I---QALMKGN-ARKLAEQDESMLM--  222 (294)
Q Consensus       173 ~--------------------~~~~~~~~~gv~r~V~vSs~~~~~~~--~~--~---~~~~~~~-~~~~~~~ae~~l~--  222 (294)
                      .                    .+.+++.+.+++||||+||..+|...  ..  .   .+..+.. +...|..+|.+++  
T Consensus        87 ~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~  166 (347)
T 4id9_A           87 FMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFH  166 (347)
T ss_dssp             CCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             ccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence            0                    15567788899999999998887541  10  0   0011111 1223445555554  


Q ss_pred             --hCCCCEEEEEccceec------------CCC---------------------------CCcceeeccCCCCCCC----
Q 022625          223 --ASGIPYTIIRTGVLQN------------TPG---------------------------GKQGFQFEEGCAANGS----  257 (294)
Q Consensus       223 --~~gl~~tivRPg~l~~------------~~~---------------------------~~~~~~~~~g~~~~~~----  257 (294)
                        +.++++++|||+.+++            +++                           ......++.+....++    
T Consensus       167 ~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  246 (347)
T 4id9_A          167 QRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHI  246 (347)
T ss_dssp             HHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECE
T ss_pred             HHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCc
Confidence              4799999999999871            111                           1112334556677788    


Q ss_pred             cCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cccccc
Q 022625          258 LSKEDAAFICVEALESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       258 Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      ++++|+|++++.++.++...+++|++++++ .++.|+
T Consensus       247 i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~  283 (347)
T 4id9_A          247 TDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAAL  283 (347)
T ss_dssp             EEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHH
T ss_pred             EeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHH
Confidence            999999999999999876778999999875 455553

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.92  E-value=5.2e-24  Score=190.65  Aligned_cols=188  Identities=14%  Similarity=0.161  Sum_probs=143.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc----
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----  173 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~----  173 (294)
                      .+|+|+|||| |+||++++++|+++|++|++++|++.+.......+++++.+|++|.+     +.++|+|||+++.    
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~   77 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGG   77 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CTTCCEEEECCCCBTTB
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cCCCCEEEECCCccccc
Confidence            3589999998 99999999999999999999999998766555568999999999943     7899999998321    


Q ss_pred             -----hHHhhhhh--cCCCEEEEecccccccCCCCc--h---hccch-hHHHHHHHHHHHHHhC-CCCEEEEEccceecC
Q 022625          174 -----FISNAGSL--KGVQHVILLSQLSVYRGSGGI--Q---ALMKG-NARKLAEQDESMLMAS-GIPYTIIRTGVLQNT  239 (294)
Q Consensus       174 -----~~~~~~~~--~gv~r~V~vSs~~~~~~~~~~--~---~~~~~-~~~~~~~~ae~~l~~~-gl~~tivRPg~l~~~  239 (294)
                           .+.+++++  .+++||||+||..++......  .   +..+. .+...|..+|.++++. +++++++||+.+++ 
T Consensus        78 ~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp~~v~G-  156 (286)
T 3ius_A           78 DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYG-  156 (286)
T ss_dssp             CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEECEEEB-
T ss_pred             cHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeccceEC-
Confidence                 25666776  789999999999887643221  0   11111 1223466788988887 99999999999883 


Q ss_pred             CC--------CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cccccc
Q 022625          240 PG--------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       240 ~~--------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      ++        .+....+..+....+++|++|+|++++.+++++. .+++||+++++ .++.|+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~~~s~~e~  218 (286)
T 3ius_A          157 PGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCDDEPVPPQDV  218 (286)
T ss_dssp             TTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEECCSCCBCHHHH
T ss_pred             CCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCC-CCCEEEEeCCCCccHHHH
Confidence            33        1222333444567899999999999999999876 67899999875 565554

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.92  E-value=7.5e-24  Score=192.19  Aligned_cols=189  Identities=16%  Similarity=0.079  Sum_probs=140.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc-----
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-----  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-----  173 (294)
                      +|+|+||||+|+||++++++|+++|++|++++|++....  . .+++++.+|++ .+.+.++++++|+|||+++.     
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~-~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~~   77 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--I-NDYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQG   77 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--C-CceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCCC
Confidence            589999999999999999999999999999999944433  2 27899999999 99999999999999998321     


Q ss_pred             -------------hHHhhhhhcCCCEEEEecccccccCCC--Cch---hccc-hhHHHHHHHHHHHHHh----CCCCEEE
Q 022625          174 -------------FISNAGSLKGVQHVILLSQLSVYRGSG--GIQ---ALMK-GNARKLAEQDESMLMA----SGIPYTI  230 (294)
Q Consensus       174 -------------~~~~~~~~~gv~r~V~vSs~~~~~~~~--~~~---~~~~-~~~~~~~~~ae~~l~~----~gl~~ti  230 (294)
                                   .+.+++++.+++||||+||..++....  +..   +..+ ..+...|..+|.++++    .++++++
T Consensus        78 ~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~i  157 (311)
T 3m2p_A           78 KISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKN  157 (311)
T ss_dssp             CGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHSCCEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCEEE
Confidence                         156678888999999999988875321  000   0001 1112234456666554    7999999


Q ss_pred             EEccceecCCCCC---------------cce-eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cccccc
Q 022625          231 IRTGVLQNTPGGK---------------QGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       231 vRPg~l~~~~~~~---------------~~~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      +||+.++ ++...               ... .++.++...++++++|+|++++.+++++. .+++|++++++ .+..|+
T Consensus       158 lRp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~i~~~~~~s~~e~  235 (311)
T 3m2p_A          158 LRFAHLY-GFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTFNIGSGDALTNYEV  235 (311)
T ss_dssp             EEECEEE-CSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEEEECCSCEECHHHH
T ss_pred             EeeCcee-CcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeEEeCCCCcccHHHH
Confidence            9999988 44321               112 22456777899999999999999998876 78999999875 455443

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.91  E-value=1.4e-23  Score=192.86  Aligned_cols=197  Identities=13%  Similarity=0.092  Sum_probs=141.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccc--hhh---hc-CCCcEEeecCCCCHHHHHHHhcC--C
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN--AME---SF-GTYVESMAGDASNKKFLKTALRG--V  164 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~--~~~---~~-~~~v~~v~~D~~d~~~l~~~l~~--~  164 (294)
                      ....+|+||||||+|+||++|+++|+++|  ++|++++|....  ...   .. ..+++++.+|++|.+.+.+++++  +
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   99 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDV   99 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTC
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCC
Confidence            34567899999999999999999999999  677777775421  111   11 14789999999999999999987  9


Q ss_pred             cEEEEcCCc----------------------hHHhhhhhcCCCEEEEecccccccCCCCc---h---hccc-hhHHHHHH
Q 022625          165 RSIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI---Q---ALMK-GNARKLAE  215 (294)
Q Consensus       165 d~Vi~~~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~---~---~~~~-~~~~~~~~  215 (294)
                      |+|||+++.                      .+.+++++.+++||||+||..++......   .   +..+ ..+...|.
T Consensus       100 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~  179 (346)
T 4egb_A          100 QVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKA  179 (346)
T ss_dssp             CEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHH
T ss_pred             CEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHH
Confidence            999998320                      15567888899999999999887643111   0   0011 11122344


Q ss_pred             HHHHHHHh----CCCCEEEEEccceecCCCC---------------C-cceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          216 QDESMLMA----SGIPYTIIRTGVLQNTPGG---------------K-QGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       216 ~ae~~l~~----~gl~~tivRPg~l~~~~~~---------------~-~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      .+|.+++.    .+++++++||+.++ ++..               + ....++.+....++|+++|+|++++.++.++.
T Consensus       180 ~~E~~~~~~~~~~g~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~  258 (346)
T 4egb_A          180 SADMIALAYYKTYQLPVIVTRCSNNY-GPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR  258 (346)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEEE-STTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeccee-CcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC
Confidence            55655544    69999999999988 4432               1 12233456677889999999999999998866


Q ss_pred             CCCcEEEEecCC-cccccc
Q 022625          276 QTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       276 ~~g~~~~v~~g~-~~~~ei  293 (294)
                       .+++|++++++ .++.|+
T Consensus       259 -~g~~~~i~~~~~~s~~e~  276 (346)
T 4egb_A          259 -VGEVYNIGGNNEKTNVEV  276 (346)
T ss_dssp             -TTCEEEECCSCCEEHHHH
T ss_pred             -CCCEEEECCCCceeHHHH
Confidence             78999999986 565554

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.91  E-value=7.1e-24  Score=191.92  Aligned_cols=191  Identities=15%  Similarity=0.124  Sum_probs=140.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc------
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~------  173 (294)
                      |+||||||+|+||++++++|+++|++|++++|+.+........+++++.+|+.|.+ +.+++++ |+|||+++.      
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~~   78 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRLS   78 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSGG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchhh
Confidence            68999999999999999999999999999999887665555678999999999988 8888888 999998321      


Q ss_pred             ----------------hHHhhhhhcCCCEEEEecccccccCCCC--c---hhccchh-HHHHHHHHHHHHH----hCCCC
Q 022625          174 ----------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QALMKGN-ARKLAEQDESMLM----ASGIP  227 (294)
Q Consensus       174 ----------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~---~~~~~~~-~~~~~~~ae~~l~----~~gl~  227 (294)
                                      .+.+++++.+++||||+||..++.....  .   .+..+.. +...|..+|.+++    +.+++
T Consensus        79 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~  158 (312)
T 3ko8_A           79 TTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVR  158 (312)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred             hhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCC
Confidence                            1456677889999999999988753321  0   0011111 1122444555443    36999


Q ss_pred             EEEEEccceecCCCCCc----------------ceeeccCCCCCCCcCHHHHHHHHHHHhhC---CCCCCcEEEEecCC-
Q 022625          228 YTIIRTGVLQNTPGGKQ----------------GFQFEEGCAANGSLSKEDAAFICVEALES---IPQTGLIFEVCEIS-  287 (294)
Q Consensus       228 ~tivRPg~l~~~~~~~~----------------~~~~~~g~~~~~~Is~eDvA~~iv~aL~~---~~~~g~~~~v~~g~-  287 (294)
                      ++++||+.++ ++....                ...++.+....+++|++|+|++++.++++   +...+++||+++++ 
T Consensus       159 ~~~lrp~~v~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~  237 (312)
T 3ko8_A          159 CLAVRYANVV-GPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDA  237 (312)
T ss_dssp             EEEEEECEEE-CTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSC
T ss_pred             EEEEeecccc-CcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCCc
Confidence            9999999988 443211                11334556778899999999999999987   55678999999874 


Q ss_pred             cccccc
Q 022625          288 NLCEQL  293 (294)
Q Consensus       288 ~~~~ei  293 (294)
                      .++.|+
T Consensus       238 ~s~~e~  243 (312)
T 3ko8_A          238 VRVLDI  243 (312)
T ss_dssp             EEHHHH
T ss_pred             eeHHHH
Confidence            455543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.91  E-value=4.2e-23  Score=192.75  Aligned_cols=193  Identities=12%  Similarity=0.001  Sum_probs=141.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc----
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----  173 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~----  173 (294)
                      .+|+|+||||+|+||++++++|+++|++|++++|++.+.......+++++.+|++|.+.+.++++++|+|||+++.    
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~  107 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGM  107 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCH
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECceecCcc
Confidence            5789999999999999999999999999999999876644333357899999999999999999999999998320    


Q ss_pred             -------------------hHHhhhhhcCCCEEEEecccccccCCCC-------ch-----hccchh-HHHHHHHHHHHH
Q 022625          174 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGG-------IQ-----ALMKGN-ARKLAEQDESML  221 (294)
Q Consensus       174 -------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~-------~~-----~~~~~~-~~~~~~~ae~~l  221 (294)
                                         .+.+++.+.+++||||+||..++.....       ..     +..+.. +...|..+|.++
T Consensus       108 ~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~  187 (379)
T 2c5a_A          108 GFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELC  187 (379)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHH
T ss_pred             cccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHH
Confidence                               1445677789999999999887653110       00     111111 122344555554


Q ss_pred             H----hCCCCEEEEEccceecCCCCC-------------------c--ceeeccCCCCCCCcCHHHHHHHHHHHhhCCCC
Q 022625          222 M----ASGIPYTIIRTGVLQNTPGGK-------------------Q--GFQFEEGCAANGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       222 ~----~~gl~~tivRPg~l~~~~~~~-------------------~--~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      +    +.++++++|||+.++ ++...                   .  ...++.+....++++++|+|++++.+++++  
T Consensus       188 ~~~~~~~gi~~~ilrp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~--  264 (379)
T 2c5a_A          188 KHYNKDFGIECRIGRFHNIY-GPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--  264 (379)
T ss_dssp             HHHHHHHCCEEEEEEECCEE-CTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS--
T ss_pred             HHHHHHHCCCEEEEEeCcee-CcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc--
Confidence            3    369999999999988 43311                   0  112344556678999999999999999876  


Q ss_pred             CCcEEEEecCC-cccccc
Q 022625          277 TGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       277 ~g~~~~v~~g~-~~~~ei  293 (294)
                      .+++|++++++ .++.|+
T Consensus       265 ~~~~~ni~~~~~~s~~e~  282 (379)
T 2c5a_A          265 FREPVNIGSDEMVSMNEM  282 (379)
T ss_dssp             CCSCEEECCCCCEEHHHH
T ss_pred             CCCeEEeCCCCccCHHHH
Confidence            46899999874 455443

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.91  E-value=7.4e-24  Score=191.17  Aligned_cols=190  Identities=15%  Similarity=0.165  Sum_probs=145.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchh--hhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc--
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG--  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~--~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~--  173 (294)
                      +|+|+||||||+||++++++|+++| ++|++++|++++..  .....+++++.+|++|.+++.++++++|+|||+.+.  
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~   84 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE   84 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence            5899999999999999999999999 99999999986532  222357899999999999999999999999998431  


Q ss_pred             ------------hHHhhhhhcCCCEEEEecccccccCCC--CchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecC
Q 022625          174 ------------FISNAGSLKGVQHVILLSQLSVYRGSG--GIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT  239 (294)
Q Consensus       174 ------------~~~~~~~~~gv~r~V~vSs~~~~~~~~--~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~  239 (294)
                                  .+.+++++.|++|||++|+..++....  ....|     ...|..+|.+++++|++|++|||+.+++.
T Consensus        85 ~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y-----~~sK~~~e~~~~~~gi~~~ilrp~~~~~~  159 (299)
T 2wm3_A           85 SCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAH-----FDGKGEVEEYFRDIGVPMTSVRLPCYFEN  159 (299)
T ss_dssp             HTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHH-----HHHHHHHHHHHHHHTCCEEEEECCEEGGG
T ss_pred             cccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcccCch-----hhHHHHHHHHHHHCCCCEEEEeecHHhhh
Confidence                        145667888999999988876654221  11122     23466789999999999999999987743


Q ss_pred             CC---------CCc--ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcEEEEecCCcccccc
Q 022625          240 PG---------GKQ--GFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       240 ~~---------~~~--~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~~~v~~g~~~~~ei  293 (294)
                      ..         .+.  ...++.++...++++++|+|++++.++.++. ..|++|+++++..+..|+
T Consensus       160 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g~~~s~~e~  225 (299)
T 2wm3_A          160 LLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEY  225 (299)
T ss_dssp             GGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCSEEECHHHH
T ss_pred             chhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeeeccCCHHHH
Confidence            11         111  1123346666789999999999999998753 468999998766666554

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.90  E-value=4.8e-23  Score=189.85  Aligned_cols=193  Identities=13%  Similarity=0.126  Sum_probs=143.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc----chh---hhcCCCcEEeecCCCCHHHHHHHhc--CCcEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----NAM---ESFGTYVESMAGDASNKKFLKTALR--GVRSII  168 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~----~~~---~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi  168 (294)
                      .+|+|+||||||+||++++++|+++|++|++++|++.    +..   .....+++++.+|++|.+++.++++  ++|+||
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   88 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVV   88 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence            3579999999999999999999999999999999872    222   1223579999999999999999999  999999


Q ss_pred             EcCCc-------hHHhhhhhcC-CCEEEEecccccccC-CCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecC
Q 022625          169 CPSEG-------FISNAGSLKG-VQHVILLSQLSVYRG-SGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT  239 (294)
Q Consensus       169 ~~~~~-------~~~~~~~~~g-v~r~V~vSs~~~~~~-~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~  239 (294)
                      |+.+.       .+.+++++.| +++||+ |+.+.... .....+.  ......|..+|.++++.|++|+++|||.+++.
T Consensus        89 ~~a~~~n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~e~~~~~p~--~~y~~sK~~~e~~l~~~g~~~tivrpg~~~g~  165 (346)
T 3i6i_A           89 STVGGESILDQIALVKAMKAVGTIKRFLP-SEFGHDVNRADPVEPG--LNMYREKRRVRQLVEESGIPFTYICCNSIASW  165 (346)
T ss_dssp             ECCCGGGGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTTCCCCTTH--HHHHHHHHHHHHHHHHTTCCBEEEECCEESSC
T ss_pred             ECCchhhHHHHHHHHHHHHHcCCceEEee-cccCCCCCccCcCCCc--chHHHHHHHHHHHHHHcCCCEEEEEecccccc
Confidence            99442       2677888889 999997 55443211 1111111  11223466789999999999999999987742


Q ss_pred             CC------------CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEec--CCcccccc
Q 022625          240 PG------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCE--ISNLCEQL  293 (294)
Q Consensus       240 ~~------------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~--g~~~~~ei  293 (294)
                      ..            ......++.|+....+++++|+|++++.++.++...+++|++.+  ...++.|+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~  233 (346)
T 3i6i_A          166 PYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINEL  233 (346)
T ss_dssp             CCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHH
T ss_pred             cCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHH
Confidence            21            11223345667778899999999999999999877789999984  34455443

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.90  E-value=7.2e-23  Score=188.80  Aligned_cols=196  Identities=14%  Similarity=0.022  Sum_probs=140.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc----hhhh---c----CCCcEEeecCCCCHHHHHHHhcCCc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AMES---F----GTYVESMAGDASNKKFLKTALRGVR  165 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~----~~~~---~----~~~v~~v~~D~~d~~~l~~~l~~~d  165 (294)
                      +.+|+||||||+|+||++++++|+++|++|++++|+...    +...   .    ..+++++.+|++|.+++.++++++|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            467899999999999999999999999999999997642    1111   1    2478999999999999999999999


Q ss_pred             EEEEcCCc----------------------hHHhhhhhcCCCEEEEecccccccCCCC--chh---ccc-hhHHHHHHHH
Q 022625          166 SIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQA---LMK-GNARKLAEQD  217 (294)
Q Consensus       166 ~Vi~~~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~~---~~~-~~~~~~~~~a  217 (294)
                      +|||+++.                      .+.+++.+.++++||++||..++.....  ...   ..+ ..+...|..+
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~  184 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN  184 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence            99998321                      1445677789999999999988754321  000   000 1111234455


Q ss_pred             HHHHH----hCCCCEEEEEccceecCCCCCc--------------------ceeeccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          218 ESMLM----ASGIPYTIIRTGVLQNTPGGKQ--------------------GFQFEEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       218 e~~l~----~~gl~~tivRPg~l~~~~~~~~--------------------~~~~~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                      |.+++    +.++++++|||+.++ ++....                    ...++.+....++++++|+|++++.++..
T Consensus       185 e~~~~~~~~~~g~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~  263 (352)
T 1sb8_A          185 ELYADVFSRCYGFSTIGLRYFNVF-GRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA  263 (352)
T ss_dssp             HHHHHHHHHHHCCCCEEEEECCEE-CTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHcCCCEEEEEECcee-CcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc
Confidence            55553    358999999999988 433210                    01123445567899999999999999877


Q ss_pred             C-CCCCcEEEEecCC-cccccc
Q 022625          274 I-PQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       274 ~-~~~g~~~~v~~g~-~~~~ei  293 (294)
                      + ...+++|++++++ .+++|+
T Consensus       264 ~~~~~~~~~ni~~~~~~s~~e~  285 (352)
T 1sb8_A          264 GLDARNQVYNIAVGGRTSLNQL  285 (352)
T ss_dssp             CGGGCSEEEEESCSCCEEHHHH
T ss_pred             cccCCCceEEeCCCCCccHHHH
Confidence            3 4568999999874 455543

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.90  E-value=7e-23  Score=187.59  Aligned_cols=195  Identities=15%  Similarity=0.117  Sum_probs=140.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCHHHHHHHhc--CCcEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR--GVRSII  168 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi  168 (294)
                      .+|+||||||+|+||++++++|+++|++|++++|+.++..+.       .+.+++++.+|++|.+.+.++++  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            468999999999999999999999999999999987653322       24578999999999999999998  899999


Q ss_pred             EcCCc----------------------hHHhhhhhcCCCEEEEecccccccCCCCc-----hhccchh-HHHHHHHHHHH
Q 022625          169 CPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGN-ARKLAEQDESM  220 (294)
Q Consensus       169 ~~~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~-----~~~~~~~-~~~~~~~ae~~  220 (294)
                      |+++.                      .+.+++++.++++||++||..++......     .+..+.. +...|..+|.+
T Consensus        84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  163 (341)
T 3enk_A           84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQI  163 (341)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHH
T ss_pred             ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence            98321                      14456778899999999998887532210     0111111 12234455665


Q ss_pred             HHh----C-CCCEEEEEccceecCCCC-------------------------C-cce-eec------cCCCCCCCcCHHH
Q 022625          221 LMA----S-GIPYTIIRTGVLQNTPGG-------------------------K-QGF-QFE------EGCAANGSLSKED  262 (294)
Q Consensus       221 l~~----~-gl~~tivRPg~l~~~~~~-------------------------~-~~~-~~~------~g~~~~~~Is~eD  262 (294)
                      ++.    . +++++++||+.++ ++..                         . ... .++      .|....+++|++|
T Consensus       164 ~~~~~~~~~~~~~~~lRp~~v~-G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D  242 (341)
T 3enk_A          164 LRDVEAADPSWRVATLRYFNPV-GAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVD  242 (341)
T ss_dssp             HHHHHHHCTTCEEEEEEECEEE-CCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHH
T ss_pred             HHHHhhcCCCceEEEEeecccc-CCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHH
Confidence            543    3 5999999999988 3321                         0 001 112      4556678999999


Q ss_pred             HHHHHHHHhhC--CCCCCcEEEEecCC-cccccc
Q 022625          263 AAFICVEALES--IPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       263 vA~~iv~aL~~--~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      +|++++.++++  +...+++||+++++ .+++|+
T Consensus       243 va~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~  276 (341)
T 3enk_A          243 LARGHIAALDALERRDASLTVNLGTGRGYSVLEV  276 (341)
T ss_dssp             HHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHH
T ss_pred             HHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHH
Confidence            99999999987  34568999998875 455543

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.90  E-value=3.9e-23  Score=187.43  Aligned_cols=191  Identities=15%  Similarity=0.078  Sum_probs=134.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc-----
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-----  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-----  173 (294)
                      ||+||||||+||||++++++|+++| .++++.+......+.....++++.+|++| +.+.++++++|+|||++..     
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~~   78 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVRI   78 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC-
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChhh
Confidence            4789999999999999999999999 55555544333333345678999999999 9999999999999998321     


Q ss_pred             -----------------hHHhhhhhcCCCEEEEecccccccCCCCc-----hhccchh-HHHHHHHHHHHHH----hCCC
Q 022625          174 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGN-ARKLAEQDESMLM----ASGI  226 (294)
Q Consensus       174 -----------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~-----~~~~~~~-~~~~~~~ae~~l~----~~gl  226 (294)
                                       .+.+++.+.++++||++||..++......     .+..+.. +...|..+|.+++    +.++
T Consensus        79 ~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~  158 (313)
T 3ehe_A           79 GAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDM  158 (313)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence                             14556778899999999999887532210     0111111 1123444555543    4699


Q ss_pred             CEEEEEccceecCCCCC---------------c-ceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cc
Q 022625          227 PYTIIRTGVLQNTPGGK---------------Q-GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-NL  289 (294)
Q Consensus       227 ~~tivRPg~l~~~~~~~---------------~-~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-~~  289 (294)
                      +++++||+.++ +++..               . ...++.+....++++++|+|++++.++. +...+++||+++++ .+
T Consensus       159 ~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~-~~~~~~~~ni~~~~~~s  236 (313)
T 3ehe_A          159 QAWIYRFANVI-GRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR-GDERVNIFNIGSEDQIK  236 (313)
T ss_dssp             EEEEEECSCEE-STTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT-CCSSEEEEECCCSCCEE
T ss_pred             CEEEEeecccc-CcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc-cCCCCceEEECCCCCee
Confidence            99999999998 44321               1 1134456677899999999999999998 45568999999874 45


Q ss_pred             cccc
Q 022625          290 CEQL  293 (294)
Q Consensus       290 ~~ei  293 (294)
                      +.|+
T Consensus       237 ~~e~  240 (313)
T 3ehe_A          237 VKRI  240 (313)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5543

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.90  E-value=1e-22  Score=185.69  Aligned_cols=194  Identities=14%  Similarity=0.167  Sum_probs=137.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEcCCc---
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG---  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~~---  173 (294)
                      ||+|+||||+|+||++++++|+++|++|++++|+.....+....+++++.+|++|.+.+.++++  ++|+|||+++.   
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~   80 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLV   80 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCc
Confidence            4799999999999999999999999999999997655433333478999999999999999998  89999998321   


Q ss_pred             -------------------hHHhhhhhcCCCEEEEecccccccCCCC--ch---hccc-hhHHHHHHHHHHHHHh----C
Q 022625          174 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ---ALMK-GNARKLAEQDESMLMA----S  224 (294)
Q Consensus       174 -------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~---~~~~-~~~~~~~~~ae~~l~~----~  224 (294)
                                         .+.+++++.+++|||++||..++.....  ..   +..+ ..+...|..+|.+++.    .
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  160 (330)
T 2c20_A           81 GVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQAS  160 (330)
T ss_dssp             HHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS
T ss_pred             cccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHh
Confidence                               1445677789999999999988753211  00   0001 1112234455665543    5


Q ss_pred             CCCEEEEEccceecCCCC-----------C--------------ccee-ec------cCCCCCCCcCHHHHHHHHHHHhh
Q 022625          225 GIPYTIIRTGVLQNTPGG-----------K--------------QGFQ-FE------EGCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       225 gl~~tivRPg~l~~~~~~-----------~--------------~~~~-~~------~g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                      +++++++||+.++ ++..           .              ..+. ++      .|....++++++|+|++++.+++
T Consensus       161 ~~~~~ilrp~~v~-G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~  239 (330)
T 2c20_A          161 NLRYKIFRYFNVA-GATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLK  239 (330)
T ss_dssp             SCEEEEEECSEEE-CCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHH
T ss_pred             CCcEEEEecCccc-CCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHh
Confidence            8999999999987 3320           0              0011 11      23445678999999999999998


Q ss_pred             CCCC--CCcEEEEecCC-cccccc
Q 022625          273 SIPQ--TGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       273 ~~~~--~g~~~~v~~g~-~~~~ei  293 (294)
                      ++..  .+++||+++++ .+++|+
T Consensus       240 ~~~~~~~~~~~ni~~~~~~s~~e~  263 (330)
T 2c20_A          240 DLQNGGESDFYNLGNGNGFSVKEI  263 (330)
T ss_dssp             HHHTTCCCEEEECCCTTCBCHHHH
T ss_pred             ccccCCCCCeEEeCCCCCccHHHH
Confidence            6432  46899998864 565554

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.90  E-value=6.1e-23  Score=186.47  Aligned_cols=190  Identities=12%  Similarity=0.027  Sum_probs=136.3

Q ss_pred             CCCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcC--CcEEEEc
Q 022625           93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICP  170 (294)
Q Consensus        93 ~~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~~  170 (294)
                      .....+.|+||||||+|+||++++++|+++|++|++++|++.. .. .  +++++.+|++|.+.+.+++++  +|+|||+
T Consensus         6 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-l--~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   81 (321)
T 2pk3_A            6 HHHHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-P--NVEMISLDIMDSQRVKKVISDIKPDYIFHL   81 (321)
T ss_dssp             -------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-T--TEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             cccccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-c--eeeEEECCCCCHHHHHHHHHhcCCCEEEEc
Confidence            3455678999999999999999999999999999999998765 22 2  688999999999999999986  8999998


Q ss_pred             CCc----------------------hHHhhhhhc-CCCEEEEecccccccCC-------------CCchhccchhHHHHH
Q 022625          171 SEG----------------------FISNAGSLK-GVQHVILLSQLSVYRGS-------------GGIQALMKGNARKLA  214 (294)
Q Consensus       171 ~~~----------------------~~~~~~~~~-gv~r~V~vSs~~~~~~~-------------~~~~~~~~~~~~~~~  214 (294)
                      ++.                      .+.+++.+. +++|||++||..++...             .+...|     ...|
T Consensus        82 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y-----~~sK  156 (321)
T 2pk3_A           82 AAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPY-----GVSK  156 (321)
T ss_dssp             CSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHH-----HHHH
T ss_pred             CcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCcc-----HHHH
Confidence            321                      034456554 68999999999877542             111122     2234


Q ss_pred             HHHHHHHHh----CCCCEEEEEccceecCCCCCc---------------------ceeeccCCCCCCCcCHHHHHHHHHH
Q 022625          215 EQDESMLMA----SGIPYTIIRTGVLQNTPGGKQ---------------------GFQFEEGCAANGSLSKEDAAFICVE  269 (294)
Q Consensus       215 ~~ae~~l~~----~gl~~tivRPg~l~~~~~~~~---------------------~~~~~~g~~~~~~Is~eDvA~~iv~  269 (294)
                      ..+|.+++.    .|++++++||+.++ +++...                     ...++.+.....+++++|+|++++.
T Consensus       157 ~~~E~~~~~~~~~~gi~~~ilrp~~v~-g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~  235 (321)
T 2pk3_A          157 ASVGMLARQYVKAYGMDIIHTRTFNHI-GPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWL  235 (321)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEE-CTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCEEEEEeCccc-CcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHH
Confidence            455666544    49999999999988 443211                     1123344556778999999999999


Q ss_pred             HhhCCCCCCcEEEEecCC-cccccc
Q 022625          270 ALESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       270 aL~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      ++.++ ..+++|+++++. .++.|+
T Consensus       236 ~~~~~-~~g~~~~i~~~~~~s~~e~  259 (321)
T 2pk3_A          236 LSQYG-KTGDVYNVCSGIGTRIQDV  259 (321)
T ss_dssp             HHHHC-CTTCEEEESCSCEEEHHHH
T ss_pred             HHhCC-CCCCeEEeCCCCCeeHHHH
Confidence            99876 457899998874 455543

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.90  E-value=2.2e-23  Score=186.88  Aligned_cols=188  Identities=15%  Similarity=0.156  Sum_probs=143.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcC-CcEEEEcCC----
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-VRSIICPSE----  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~-~d~Vi~~~~----  172 (294)
                      .+|+|+||| +|+||++++++|+++|++|++++|++++.    +.+++++.+|++|.+.+.+++++ +|+|||+++    
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~   76 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEY   76 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHH
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCC
Confidence            468999999 59999999999999999999999998763    36789999999999999999988 999999821    


Q ss_pred             -------------chHHhhhhhcCCCEEEEecccccccCCCCc-----hhccch-hHHHHHHHHHHHHHhCCCCEEEEEc
Q 022625          173 -------------GFISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKG-NARKLAEQDESMLMASGIPYTIIRT  233 (294)
Q Consensus       173 -------------~~~~~~~~~~gv~r~V~vSs~~~~~~~~~~-----~~~~~~-~~~~~~~~ae~~l~~~gl~~tivRP  233 (294)
                                   ..+.+++.+.+++||||+||..+|......     .+..+. .+...|..+|.+ ++. ++++++||
T Consensus        77 ~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~~~ilR~  154 (286)
T 3gpi_A           77 SDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-YSSTILRF  154 (286)
T ss_dssp             C-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-SSEEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-CCeEEEec
Confidence                         015667788899999999999887643211     011111 122345677888 767 99999999


Q ss_pred             cceecCCCCCc-------ceeeccCCCCCCCcCHHHHHHHHHHHhhCC--CCCCcEEEEecCC-cccccc
Q 022625          234 GVLQNTPGGKQ-------GFQFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       234 g~l~~~~~~~~-------~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~--~~~g~~~~v~~g~-~~~~ei  293 (294)
                      +.++ ++....       ...+..+....++++++|+|++++.+++++  ...+++|++++++ .++.|+
T Consensus       155 ~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~  223 (286)
T 3gpi_A          155 SGIY-GPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDL  223 (286)
T ss_dssp             CEEE-BTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHHHH
T ss_pred             cccc-CCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHHHH
Confidence            9998 444211       112234566678999999999999999885  5668999999875 555554

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.90  E-value=6.4e-23  Score=189.66  Aligned_cols=190  Identities=17%  Similarity=0.203  Sum_probs=145.0

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHC-CC-eEEEEEcCccchhhh---c-CCCcEEeecCCCCHHHHHHHhcCCcEE
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVK-RT-RIKALVKDKRNAMES---F-GTYVESMAGDASNKKFLKTALRGVRSI  167 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~-g~-~V~~~~R~~~~~~~~---~-~~~v~~v~~D~~d~~~l~~~l~~~d~V  167 (294)
                      .....+|+||||||+|+||++++++|+++ |+ +|++++|++.+....   + ..+++++.+|++|.+++.++++++|+|
T Consensus        16 ~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~V   95 (344)
T 2gn4_A           16 QNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDIC   95 (344)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred             HHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEE
Confidence            34456899999999999999999999999 97 999999998764332   1 257899999999999999999999999


Q ss_pred             EEcCCc----------------------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHh--
Q 022625          168 ICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA--  223 (294)
Q Consensus       168 i~~~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~--  223 (294)
                      ||+++.                      .+.+++.+.++++||++||..++.+.   ..|..     .|..+|.+++.  
T Consensus        96 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~---~~Y~~-----sK~~~E~~~~~~~  167 (344)
T 2gn4_A           96 IHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPI---NLYGA-----TKLCSDKLFVSAN  167 (344)
T ss_dssp             EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCC---SHHHH-----HHHHHHHHHHHGG
T ss_pred             EECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCc---cHHHH-----HHHHHHHHHHHHH
Confidence            998321                      14556778899999999998776543   23322     24456666553  


Q ss_pred             -----CCCCEEEEEccceecCCCC------------Cc-ceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 022625          224 -----SGIPYTIIRTGVLQNTPGG------------KQ-GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCE  285 (294)
Q Consensus       224 -----~gl~~tivRPg~l~~~~~~------------~~-~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~  285 (294)
                           .++++++||||.++ ++..            +. ...+..+.....+++++|+|++++.+++++ ..+++|++.+
T Consensus       168 ~~~~~~g~~~~~vRpg~v~-g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~-~~g~~~~~~~  245 (344)
T 2gn4_A          168 NFKGSSQTQFSVVRYGNVV-GSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRM-HGGEIFVPKI  245 (344)
T ss_dssp             GCCCSSCCEEEEECCCEET-TCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHC-CSSCEEEECC
T ss_pred             HHhCCCCcEEEEEEeccEE-CCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhc-cCCCEEecCC
Confidence                 57999999999988 4331            11 233334445567899999999999999875 4578999988


Q ss_pred             CCcccccc
Q 022625          286 ISNLCEQL  293 (294)
Q Consensus       286 g~~~~~ei  293 (294)
                      +..++.|+
T Consensus       246 ~~~s~~el  253 (344)
T 2gn4_A          246 PSMKMTDL  253 (344)
T ss_dssp             CEEEHHHH
T ss_pred             CcEEHHHH
Confidence            87666664

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.90  E-value=1.1e-22  Score=188.71  Aligned_cols=189  Identities=16%  Similarity=0.135  Sum_probs=143.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch--hhhcC-CCcEEeecC-CCCHHHHHHHhcCCcEEEEcCCc-
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--MESFG-TYVESMAGD-ASNKKFLKTALRGVRSIICPSEG-  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~~-~~v~~v~~D-~~d~~~l~~~l~~~d~Vi~~~~~-  173 (294)
                      +|+|+||||||+||++++++|+++|++|++++|++++.  ..... .+++++.+| ++|.+++.++++++|+|||+... 
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~   84 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ   84 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCST
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCC
Confidence            68999999999999999999999999999999988764  22222 368899999 99999999999999999987322 


Q ss_pred             ---------hHHhhhhhcC-CCEEEEeccccc--ccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecCCC
Q 022625          174 ---------FISNAGSLKG-VQHVILLSQLSV--YRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG  241 (294)
Q Consensus       174 ---------~~~~~~~~~g-v~r~V~vSs~~~--~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~  241 (294)
                               .+.+++++.| ++|||++||...  +.+ .....|.     ..|..+|.++++.++++++|||+.+.++..
T Consensus        85 ~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-~~~~~y~-----~sK~~~E~~~~~~gi~~~ivrpg~~g~~~~  158 (352)
T 1xgk_A           85 AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP-WPAVPMW-----APKFTVENYVRQLGLPSTFVYAGIYNNNFT  158 (352)
T ss_dssp             TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS-CCCCTTT-----HHHHHHHHHHHTSSSCEEEEEECEEGGGCB
T ss_pred             CcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCC-CCCccHH-----HHHHHHHHHHHHcCCCEEEEecceecCCch
Confidence                     1566778888 999999999862  222 1222332     235678999999999999999997654321


Q ss_pred             C-----------Ccce---e-eccCCCCCCCcCH-HHHHHHHHHHhhCCC--CCCcEEEEecCCcccccc
Q 022625          242 G-----------KQGF---Q-FEEGCAANGSLSK-EDAAFICVEALESIP--QTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       242 ~-----------~~~~---~-~~~g~~~~~~Is~-eDvA~~iv~aL~~~~--~~g~~~~v~~g~~~~~ei  293 (294)
                      .           ..+.   . +..++...+++++ +|+|++++.++.++.  ..+++|+++++..+++|+
T Consensus       159 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~~~~s~~e~  228 (352)
T 1xgk_A          159 SLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQV  228 (352)
T ss_dssp             SSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHH
T ss_pred             hcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEecCCCCHHHH
Confidence            1           0111   1 2235566788998 999999999998753  368999999877666654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.90  E-value=1.6e-22  Score=185.18  Aligned_cols=196  Identities=16%  Similarity=0.184  Sum_probs=144.0

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHHhc--CCcEEEE
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR--GVRSIIC  169 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~  169 (294)
                      .....+|+||||||+|+||++++++|+++|++|++++|+.....+...  .+++++.+|++|.+.+.++++  ++|+|||
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih   94 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVH   94 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEE
Confidence            456678999999999999999999999999999999997654321111  468899999999999999999  9999999


Q ss_pred             cCC---c----------------hHHhhhhhcCCCEEEEecccccccCCCC---c-hhc--cchhHHHHHHHHHHHHHhC
Q 022625          170 PSE---G----------------FISNAGSLKGVQHVILLSQLSVYRGSGG---I-QAL--MKGNARKLAEQDESMLMAS  224 (294)
Q Consensus       170 ~~~---~----------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~---~-~~~--~~~~~~~~~~~ae~~l~~~  224 (294)
                      +++   .                .+.+++.+.++++||++||..++.....   . ...  ....+...|..+|.+++..
T Consensus        95 ~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~  174 (330)
T 2pzm_A           95 SAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMS  174 (330)
T ss_dssp             CCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC
T ss_pred             CCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHc
Confidence            832   1                1445677788999999999988754321   0 000  0111223455778888888


Q ss_pred             CCCEEEEEccceecCCCCCcc-------------eeeccCCCCCCCcCHHHHHH-HHHHHhhCCCCCCcEEEEecCC-cc
Q 022625          225 GIPYTIIRTGVLQNTPGGKQG-------------FQFEEGCAANGSLSKEDAAF-ICVEALESIPQTGLIFEVCEIS-NL  289 (294)
Q Consensus       225 gl~~tivRPg~l~~~~~~~~~-------------~~~~~g~~~~~~Is~eDvA~-~iv~aL~~~~~~g~~~~v~~g~-~~  289 (294)
                      ++++++|||+.++ +|+....             ..++.+. ...+++++|+|+ +++.+++++.  +++|+++++. .+
T Consensus       175 ~~~~~~iR~~~v~-gp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~~~~~~s  250 (330)
T 2pzm_A          175 DVPVVSLRLANVT-GPRLAIGPIPTFYKRLKAGQKCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TGVFNVSTGEGHS  250 (330)
T ss_dssp             SSCEEEEEECEEE-CTTCCSSHHHHHHHHHHTTCCCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CEEEEESCSCCEE
T ss_pred             CCCEEEEeeeeeE-CcCCCCCHHHHHHHHHHcCCEEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CCEEEeCCCCCCC
Confidence            9999999999888 5542111             1122233 567899999999 9999998754  8999999874 45


Q ss_pred             cccc
Q 022625          290 CEQL  293 (294)
Q Consensus       290 ~~ei  293 (294)
                      +.|+
T Consensus       251 ~~e~  254 (330)
T 2pzm_A          251 IKEV  254 (330)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5553

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.89  E-value=1.6e-22  Score=188.65  Aligned_cols=195  Identities=12%  Similarity=0.060  Sum_probs=137.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchhhhc--CCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      .+.+|+|+||||+|+||++++++|+++| ++|++++|+.....+..  ..+++++.+|++|.+.+.++++++|+|||+++
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~  108 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT  108 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence            3467899999999999999999999999 99999999876533222  35789999999999999999999999999832


Q ss_pred             c----------------------hHHhhhhhc-CCCEEEEecccccccCCCC--ch--------hc-cc-hhHHHHHHHH
Q 022625          173 G----------------------FISNAGSLK-GVQHVILLSQLSVYRGSGG--IQ--------AL-MK-GNARKLAEQD  217 (294)
Q Consensus       173 ~----------------------~~~~~~~~~-gv~r~V~vSs~~~~~~~~~--~~--------~~-~~-~~~~~~~~~a  217 (294)
                      .                      .+.+++.+. ++++||++||..++.....  ..        +. .+ ..+...|..+
T Consensus       109 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~  188 (377)
T 2q1s_A          109 YHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFG  188 (377)
T ss_dssp             CSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHH
T ss_pred             ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHH
Confidence            1                      044567777 8999999999887642110  00        10 11 1122234456


Q ss_pred             HHHHHh----CCCCEEEEEccceecCCCC---------C------c-------------ce-eeccCCCCCCCcCHHHHH
Q 022625          218 ESMLMA----SGIPYTIIRTGVLQNTPGG---------K------Q-------------GF-QFEEGCAANGSLSKEDAA  264 (294)
Q Consensus       218 e~~l~~----~gl~~tivRPg~l~~~~~~---------~------~-------------~~-~~~~g~~~~~~Is~eDvA  264 (294)
                      |.+++.    .++++++|||+.++ ++..         .      .             .. .++.+....++++++|+|
T Consensus       189 E~~~~~~~~~~gi~~~ilRp~~v~-G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva  267 (377)
T 2q1s_A          189 EFYSVYYHKQHQLPTVRARFQNVY-GPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVA  267 (377)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEE-CTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEeeccEE-CCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHH
Confidence            665543    59999999999988 3332         1      0             01 123345567899999999


Q ss_pred             HH-HHHHhhCCCCCCcEEEEecC-Ccccccc
Q 022625          265 FI-CVEALESIPQTGLIFEVCEI-SNLCEQL  293 (294)
Q Consensus       265 ~~-iv~aL~~~~~~g~~~~v~~g-~~~~~ei  293 (294)
                      ++ ++.+++++. .| +|+++++ ..+++|+
T Consensus       268 ~a~i~~~~~~~~-~g-~~~i~~~~~~s~~e~  296 (377)
T 2q1s_A          268 NGLIACAADGTP-GG-VYNIASGKETSIADL  296 (377)
T ss_dssp             HHHHHHHHHCCT-TE-EEECCCCCCEEHHHH
T ss_pred             HHHHHHHHhcCC-CC-eEEecCCCceeHHHH
Confidence            99 999998865 56 9999987 4555553

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.89  E-value=1.1e-22  Score=187.66  Aligned_cols=196  Identities=13%  Similarity=0.056  Sum_probs=139.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-----CCCcEEeecCCCCHHHHHHHhcC--CcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALRG--VRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~  169 (294)
                      +.+|+||||||+|+||++++++|+++|++|++++|++.+.....     ..+++++.+|++|.+.+.+++++  +|+|||
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   86 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   86 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence            45789999999999999999999999999999999876543221     34789999999999999999986  899999


Q ss_pred             cCCc----------------------hHHhhhhhcC-CCEEEEecccccccCCCC---ch---hccch-hHHHHHHHHHH
Q 022625          170 PSEG----------------------FISNAGSLKG-VQHVILLSQLSVYRGSGG---IQ---ALMKG-NARKLAEQDES  219 (294)
Q Consensus       170 ~~~~----------------------~~~~~~~~~g-v~r~V~vSs~~~~~~~~~---~~---~~~~~-~~~~~~~~ae~  219 (294)
                      +++.                      .+.+++.+.+ ++|||++||..+|.....   ..   +..+. .+...|..+|.
T Consensus        87 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  166 (357)
T 1rkx_A           87 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAEL  166 (357)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHH
T ss_pred             CCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHH
Confidence            8431                      0344566666 899999999987753221   10   11111 11223445555


Q ss_pred             HHHh-------------CCCCEEEEEccceecCCCC----------------CcceeeccCCCCCCCcCHHHHHHHHHHH
Q 022625          220 MLMA-------------SGIPYTIIRTGVLQNTPGG----------------KQGFQFEEGCAANGSLSKEDAAFICVEA  270 (294)
Q Consensus       220 ~l~~-------------~gl~~tivRPg~l~~~~~~----------------~~~~~~~~g~~~~~~Is~eDvA~~iv~a  270 (294)
                      +++.             .++++++|||+.++ +++.                +....++.+....++++++|+|++++.+
T Consensus       167 ~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~-G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~~  245 (357)
T 1rkx_A          167 VTSSYRNSFFNPANYGQHGTAVATVRAGNVI-GGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLL  245 (357)
T ss_dssp             HHHHHHHHHSCGGGHHHHCCEEEEEECCCEE-CTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhccccCCceEEEEeeceee-CCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHHH
Confidence            5543             28999999999988 4432                1112233345567899999999999998


Q ss_pred             hhC----CCCCCcEEEEecC---Ccccccc
Q 022625          271 LES----IPQTGLIFEVCEI---SNLCEQL  293 (294)
Q Consensus       271 L~~----~~~~g~~~~v~~g---~~~~~ei  293 (294)
                      +..    +...+++||++++   ..+++|+
T Consensus       246 ~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~  275 (357)
T 1rkx_A          246 AQKLYTDGAEYAEGWNFGPNDADATPVKNI  275 (357)
T ss_dssp             HHHHHHTCGGGCSEEECCCCGGGCEEHHHH
T ss_pred             HHhhhhcCCCCCceEEECCCCCCcccHHHH
Confidence            874    2356789999975   3455543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.89  E-value=3e-22  Score=183.25  Aligned_cols=192  Identities=13%  Similarity=0.082  Sum_probs=138.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCccchhhhc-CCCcEEeecCCCC-HHHHHHHhcCCcEEEEcCC--c-
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDASN-KKFLKTALRGVRSIICPSE--G-  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d-~~~l~~~l~~~d~Vi~~~~--~-  173 (294)
                      |+|+||||+|+||++++++|+++ |++|++++|+.++..... ..+++++.+|++| .+.+.++++++|+|||+++  . 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~   80 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence            58999999999999999999998 899999999987655433 2478999999998 4678889999999999722  0 


Q ss_pred             -------------------hHHhhhhhcCCCEEEEecccccccCCCC--chhc----------cch-hHHHHHHHHHHHH
Q 022625          174 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQAL----------MKG-NARKLAEQDESML  221 (294)
Q Consensus       174 -------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~~~----------~~~-~~~~~~~~ae~~l  221 (294)
                                         .+.+++.+.+ +||||+||..++.....  ....          .+. .+...|..+|.++
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  159 (345)
T 2bll_A           81 IEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI  159 (345)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred             cchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHH
Confidence                               1345667777 99999999888753221  1000          000 1222344556655


Q ss_pred             H----hCCCCEEEEEccceecCCCCC-----------------------cce-eeccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          222 M----ASGIPYTIIRTGVLQNTPGGK-----------------------QGF-QFEEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       222 ~----~~gl~~tivRPg~l~~~~~~~-----------------------~~~-~~~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                      +    +.+++++++||+.++ ++...                       ... .++.+....++++++|+|++++.++++
T Consensus       160 ~~~~~~~~~~~~ilrp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  238 (345)
T 2bll_A          160 WAYGEKEGLQFTLFRPFNWM-GPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN  238 (345)
T ss_dssp             HHHHHHHCCCEEEEEECSEE-CSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHC
T ss_pred             HHHHHhcCCCEEEEcCCccc-CCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhh
Confidence            3    469999999999988 44321                       011 123455667899999999999999987


Q ss_pred             CC--CCCcEEEEecCC--cccccc
Q 022625          274 IP--QTGLIFEVCEIS--NLCEQL  293 (294)
Q Consensus       274 ~~--~~g~~~~v~~g~--~~~~ei  293 (294)
                      +.  ..+++|++++++  .++.|+
T Consensus       239 ~~~~~~g~~~~i~~~~~~~s~~e~  262 (345)
T 2bll_A          239 AGNRCDGEIINIGNPENEASIEEL  262 (345)
T ss_dssp             GGGTTTTEEEEECCTTSEEEHHHH
T ss_pred             ccccCCCceEEeCCCCCCCCHHHH
Confidence            64  568999999974  565554

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.89  E-value=1.2e-22  Score=183.34  Aligned_cols=192  Identities=15%  Similarity=0.172  Sum_probs=139.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc-------cchhh---hcCCCcEEeecCCCCHHHHHHHhcCCcEEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-------RNAME---SFGTYVESMAGDASNKKFLKTALRGVRSII  168 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~-------~~~~~---~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi  168 (294)
                      +|+|+||||||+||++++++|+++|++|++++|++       ++...   ....+++++.+|++|.+++.++++++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            67899999999999999999999999999999987       33221   122578999999999999999999999999


Q ss_pred             EcCCc-------hHHhhhhhcC-CCEEEEecccccccCC-CCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecC
Q 022625          169 CPSEG-------FISNAGSLKG-VQHVILLSQLSVYRGS-GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT  239 (294)
Q Consensus       169 ~~~~~-------~~~~~~~~~g-v~r~V~vSs~~~~~~~-~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~  239 (294)
                      |+.+.       .+.+++++.| ++|||+ |+.+..... ....+.  ...+..|..+|.++++.+++|++|||+.+++.
T Consensus        82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~--~~~y~sK~~~e~~~~~~~i~~~~lrp~~~~~~  158 (307)
T 2gas_A           82 CAAGRLLIEDQVKIIKAIKEAGNVKKFFP-SEFGLDVDRHDAVEPV--RQVFEEKASIRRVIEAEGVPYTYLCCHAFTGY  158 (307)
T ss_dssp             ECSSSSCGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTH--HHHHHHHHHHHHHHHHHTCCBEEEECCEETTT
T ss_pred             ECCcccccccHHHHHHHHHhcCCceEEee-cccccCcccccCCCcc--hhHHHHHHHHHHHHHHcCCCeEEEEcceeecc
Confidence            98431       2667888888 999984 544322111 110110  11124466788899999999999999987642


Q ss_pred             CC------------CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecC--Ccccccc
Q 022625          240 PG------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEI--SNLCEQL  293 (294)
Q Consensus       240 ~~------------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g--~~~~~ei  293 (294)
                      ..            ......++.++....+++++|+|++++.++.++...++.|++.++  ..+..|+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~  226 (307)
T 2gas_A          159 FLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEV  226 (307)
T ss_dssp             TGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHH
T ss_pred             ccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHH
Confidence            11            111122344566678999999999999999887666888888754  3455553

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.89  E-value=4.2e-22  Score=182.86  Aligned_cols=192  Identities=15%  Similarity=0.116  Sum_probs=136.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCcc-----chhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKR-----NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~R~~~-----~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      +|+||||||+|+||++++++|+++  |++|++++|+..     .+......+++++.+|++|.+.+.++++++|+|||++
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   83 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence            589999999999999999999998  899999999653     1222223578999999999999999999999999983


Q ss_pred             Cc----------------------hHHhhhhhcCCCEEEEecccccccCCC--------------Cch---hccc-hhHH
Q 022625          172 EG----------------------FISNAGSLKGVQHVILLSQLSVYRGSG--------------GIQ---ALMK-GNAR  211 (294)
Q Consensus       172 ~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~--------------~~~---~~~~-~~~~  211 (294)
                      +.                      .+.+++.+.++ |||++||..++....              +..   +..+ ..+.
T Consensus        84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~  162 (348)
T 1oc2_A           84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  162 (348)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccH
Confidence            21                      14456677787 999999988764321              000   0011 1112


Q ss_pred             HHHHHHHHHHHh----CCCCEEEEEccceecCCCCC----------------cceeeccCCCCCCCcCHHHHHHHHHHHh
Q 022625          212 KLAEQDESMLMA----SGIPYTIIRTGVLQNTPGGK----------------QGFQFEEGCAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       212 ~~~~~ae~~l~~----~gl~~tivRPg~l~~~~~~~----------------~~~~~~~g~~~~~~Is~eDvA~~iv~aL  271 (294)
                      ..|..+|.+++.    .++++++|||+.++ ++...                ....++.+.....+++++|+|++++.++
T Consensus       163 ~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  241 (348)
T 1oc2_A          163 STKAASDLIVKAWVRSFGVKATISNCSNNY-GPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAIL  241 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEE-STTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeeceee-CCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHh
Confidence            234455555543    58999999999988 44321                0112234555678999999999999999


Q ss_pred             hCCCCCCcEEEEecCC-cccccc
Q 022625          272 ESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       272 ~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      +.+ ..+++|+++++. .+++|+
T Consensus       242 ~~~-~~g~~~~i~~~~~~s~~e~  263 (348)
T 1oc2_A          242 TKG-RMGETYLIGADGEKNNKEV  263 (348)
T ss_dssp             HHC-CTTCEEEECCSCEEEHHHH
T ss_pred             hCC-CCCCeEEeCCCCCCCHHHH
Confidence            764 468899999875 455543

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.89  E-value=2.3e-22  Score=188.30  Aligned_cols=197  Identities=19%  Similarity=0.179  Sum_probs=137.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchh-----------------------hhcCCCcEEeecCCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----------------------ESFGTYVESMAGDAS  152 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~-----------------------~~~~~~v~~v~~D~~  152 (294)
                      ..++++||||||+||||++++++|+++|++|++++|......                       .....+++++.+|++
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~   87 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   87 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence            346899999999999999999999999999999988643210                       012357899999999


Q ss_pred             CHHHHHHHhcC--CcEEEEcCCc---------------h----------HHhhhhhcCC-CEEEEecccccccCCCCc-h
Q 022625          153 NKKFLKTALRG--VRSIICPSEG---------------F----------ISNAGSLKGV-QHVILLSQLSVYRGSGGI-Q  203 (294)
Q Consensus       153 d~~~l~~~l~~--~d~Vi~~~~~---------------~----------~~~~~~~~gv-~r~V~vSs~~~~~~~~~~-~  203 (294)
                      |.+.+.+++++  +|+|||+++.               .          +.+++.+.++ ++||++||..++...... .
T Consensus        88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~  167 (404)
T 1i24_A           88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIE  167 (404)
T ss_dssp             SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBC
T ss_pred             CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCCC
Confidence            99999999988  9999998320               0          3345667787 599999999877532110 0


Q ss_pred             -----------------hccchhHH-HHHHHHHHHHH----hCCCCEEEEEccceecCCCCC------------------
Q 022625          204 -----------------ALMKGNAR-KLAEQDESMLM----ASGIPYTIIRTGVLQNTPGGK------------------  243 (294)
Q Consensus       204 -----------------~~~~~~~~-~~~~~ae~~l~----~~gl~~tivRPg~l~~~~~~~------------------  243 (294)
                                       +..+...+ ..|..+|.+++    +.++++++|||+.++ +++..                  
T Consensus       168 E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~-Gp~~~~~~~~~~~~~~~~~~~~~  246 (404)
T 1i24_A          168 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVY-GVKTDETEMHEELRNRLDYDAVF  246 (404)
T ss_dssp             SSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE-CSCCTTGGGSGGGCCCCCCSTTT
T ss_pred             ccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceee-CCCCCccccccccccccccccch
Confidence                             00011112 23444555543    359999999999988 44321                  


Q ss_pred             --------------cce-eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCC--cEEEEecCCcccccc
Q 022625          244 --------------QGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTG--LIFEVCEISNLCEQL  293 (294)
Q Consensus       244 --------------~~~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g--~~~~v~~g~~~~~ei  293 (294)
                                    ... .++.+....++++++|+|++++.+++++...+  ++||++++..++.|+
T Consensus       247 ~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~  313 (404)
T 1i24_A          247 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNEL  313 (404)
T ss_dssp             CCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHH
T ss_pred             hhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHH
Confidence                          011 23445566789999999999999998876556  799998855555554

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.89  E-value=5.5e-23  Score=185.84  Aligned_cols=193  Identities=13%  Similarity=0.063  Sum_probs=138.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEcCCc-
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG-  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~~-  173 (294)
                      +|+|+||||+|+||++++++|+++  |++|++++|+..+..  ...+++++.+|++|.+.+.++++  ++|+|||+++. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~   79 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD--VVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALL   79 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH--HHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc--ccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccC
Confidence            578999999999999999999999  899999999876532  11357889999999999999998  89999998321 


Q ss_pred             --------------------hHHhhhhhcCCCEEEEecccccccCCCC---chh---ccch-hHHHHHHHHHHHHH----
Q 022625          174 --------------------FISNAGSLKGVQHVILLSQLSVYRGSGG---IQA---LMKG-NARKLAEQDESMLM----  222 (294)
Q Consensus       174 --------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~---~~~---~~~~-~~~~~~~~ae~~l~----  222 (294)
                                          .+.+++.+.+++|||++||..++.....   ...   ..+. .+...|..+|.+++    
T Consensus        80 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~  159 (312)
T 2yy7_A           80 SATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHN  159 (312)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHH
Confidence                                1445677789999999999988754211   000   0011 11223444555543    


Q ss_pred             hCCCCEEEEEccceecC---CCCC----------------cceeeccCCCCCCCcCHHHHHHHHHHHhhCCCC---CCcE
Q 022625          223 ASGIPYTIIRTGVLQNT---PGGK----------------QGFQFEEGCAANGSLSKEDAAFICVEALESIPQ---TGLI  280 (294)
Q Consensus       223 ~~gl~~tivRPg~l~~~---~~~~----------------~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~---~g~~  280 (294)
                      +.+++++++||+.+++.   ++..                ....++.++...++++++|+|++++.+++++..   .+++
T Consensus       160 ~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~  239 (312)
T 2yy7_A          160 IYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSS  239 (312)
T ss_dssp             HHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSC
T ss_pred             hcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccCce
Confidence            35899999999998841   2211                111223456667899999999999999988653   2489


Q ss_pred             EEEecCCcccccc
Q 022625          281 FEVCEISNLCEQL  293 (294)
Q Consensus       281 ~~v~~g~~~~~ei  293 (294)
                      ||+++...++.|+
T Consensus       240 ~ni~~~~~s~~e~  252 (312)
T 2yy7_A          240 YNLAAMSFTPTEI  252 (312)
T ss_dssp             EECCSEEECHHHH
T ss_pred             EEeCCCccCHHHH
Confidence            9998755565554

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.89  E-value=2.5e-22  Score=184.02  Aligned_cols=194  Identities=14%  Similarity=0.040  Sum_probs=136.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-----hhhhc-CCCcEEeecCCCCHHHHHHHhcC--CcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF-GTYVESMAGDASNKKFLKTALRG--VRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~-~~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~~  170 (294)
                      ||+||||||+||||++++++|+++|++|++++|+...     ..... ..+++++.+|++|.+.+.+++++  +|+|||+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence            4789999999999999999999999999999985321     11111 13588999999999999999988  9999998


Q ss_pred             CCc----------------------hHHhhhhhcCCC-EEEEecccccccCCCC------------------c---hhcc
Q 022625          171 SEG----------------------FISNAGSLKGVQ-HVILLSQLSVYRGSGG------------------I---QALM  206 (294)
Q Consensus       171 ~~~----------------------~~~~~~~~~gv~-r~V~vSs~~~~~~~~~------------------~---~~~~  206 (294)
                      ++.                      .+.+++.+.+++ +||++||..++.....                  .   .+..
T Consensus        81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  160 (347)
T 1orr_A           81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  160 (347)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCC
Confidence            321                      144567777886 9999999887653211                  0   0011


Q ss_pred             chh-HHHHHHHHHHHHHh----CCCCEEEEEccceecCCCCC------------------------cceeeccCCCCCCC
Q 022625          207 KGN-ARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPGGK------------------------QGFQFEEGCAANGS  257 (294)
Q Consensus       207 ~~~-~~~~~~~ae~~l~~----~gl~~tivRPg~l~~~~~~~------------------------~~~~~~~g~~~~~~  257 (294)
                      +.. +...|..+|.+++.    .++++++|||+.++ ++...                        ....++.|....++
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~  239 (347)
T 1orr_A          161 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMY-GGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV  239 (347)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEE-CTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEEC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCcee-CcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEee
Confidence            111 12234455665544    48999999999988 33211                        01123345556779


Q ss_pred             cCHHHHHHHHHHHhhC-CCCCCcEEEEecCC---cccccc
Q 022625          258 LSKEDAAFICVEALES-IPQTGLIFEVCEIS---NLCEQL  293 (294)
Q Consensus       258 Is~eDvA~~iv~aL~~-~~~~g~~~~v~~g~---~~~~ei  293 (294)
                      ++++|+|++++.++.+ +...|++|+++++.   .+++|+
T Consensus       240 i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~  279 (347)
T 1orr_A          240 LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLEL  279 (347)
T ss_dssp             EEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHH
T ss_pred             EEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHH
Confidence            9999999999999986 23568899999885   465554

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.89  E-value=1.3e-22  Score=183.73  Aligned_cols=192  Identities=13%  Similarity=0.133  Sum_probs=140.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc-----chhh---hcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-----NAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~-----~~~~---~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      +|+|+||||||+||++++++|+++|++|++++|+..     +...   ....+++++.+|++|.+++.++++++|+|||+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   83 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   83 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence            578999999999999999999999999999999853     2211   12457999999999999999999999999998


Q ss_pred             CCc-----------hHHhhhhhcC-CCEEEEecccccccCC--CCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccce
Q 022625          171 SEG-----------FISNAGSLKG-VQHVILLSQLSVYRGS--GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL  236 (294)
Q Consensus       171 ~~~-----------~~~~~~~~~g-v~r~V~vSs~~~~~~~--~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l  236 (294)
                      .+.           .+.+++++.| ++|||+ |+.+.....  ....+.  ...+..|..+|.++++.+++|++|||+.+
T Consensus        84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~~p~--~~~y~sK~~~e~~~~~~g~~~~ilrp~~~  160 (313)
T 1qyd_A           84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDIMEHALQPG--SITFIDKRKVRRAIEAASIPYTYVSSNMF  160 (313)
T ss_dssp             CCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTSCCCCCSST--THHHHHHHHHHHHHHHTTCCBCEEECCEE
T ss_pred             CccccchhhHHHHHHHHHHHHhcCCCceEEe-cCCcCCccccccCCCCC--cchHHHHHHHHHHHHhcCCCeEEEEecee
Confidence            321           2667888888 999986 554322111  110010  11224566789999999999999999987


Q ss_pred             ecCC-------------CCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecC--Ccccccc
Q 022625          237 QNTP-------------GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEI--SNLCEQL  293 (294)
Q Consensus       237 ~~~~-------------~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g--~~~~~ei  293 (294)
                      ++..             ..+....++.++...++++++|+|++++.++.++...++.|++.++  ..+..|+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~  232 (313)
T 1qyd_A          161 AGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEV  232 (313)
T ss_dssp             HHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHH
T ss_pred             ccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHH
Confidence            6310             0111112344566678999999999999999887667888888754  3455543

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.89  E-value=7.4e-22  Score=180.63  Aligned_cols=192  Identities=18%  Similarity=0.158  Sum_probs=136.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC---C---CeEEEEEcCcc-----chhhhc-CCCcEEeecCCCCHHHHHHHhcCCcEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVK---R---TRIKALVKDKR-----NAMESF-GTYVESMAGDASNKKFLKTALRGVRSI  167 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~---g---~~V~~~~R~~~-----~~~~~~-~~~v~~v~~D~~d~~~l~~~l~~~d~V  167 (294)
                      |+|+||||+|+||++++++|+++   |   ++|++++|+..     .+.... ..+++++.+|++|.+.+.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            58999999999999999999997   8   99999999642     122111 247899999999999999999999999


Q ss_pred             EEcCCc----------------------hHHhhhhhcCCCEEEEecccccccCCC--Cch---hccc-hhHHHHHHHHHH
Q 022625          168 ICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSG--GIQ---ALMK-GNARKLAEQDES  219 (294)
Q Consensus       168 i~~~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~--~~~---~~~~-~~~~~~~~~ae~  219 (294)
                      ||+++.                      .+.+++.+.+++|||++||..++....  +..   +..+ ..+...|..+|.
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHH
Confidence            998321                      144567778899999999988764321  000   0001 111122444555


Q ss_pred             HHH----hCCCCEEEEEccceecCCCCC---------------cce-eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCc
Q 022625          220 MLM----ASGIPYTIIRTGVLQNTPGGK---------------QGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTGL  279 (294)
Q Consensus       220 ~l~----~~gl~~tivRPg~l~~~~~~~---------------~~~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~  279 (294)
                      +++    +.+++++++||+.++ ++...               ... .++.+.....+++++|+|++++.+++++ ..++
T Consensus       161 ~~~~~~~~~g~~~~ilrp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~-~~g~  238 (337)
T 1r6d_A          161 VARAYHRTYGLDVRITRCCNNY-GPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG-RAGE  238 (337)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEE-CTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC-CTTC
T ss_pred             HHHHHHHHHCCCEEEEEeeeeE-CCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC-CCCC
Confidence            543    369999999999988 44321               111 2234555678999999999999999764 4678


Q ss_pred             EEEEecCC-cccccc
Q 022625          280 IFEVCEIS-NLCEQL  293 (294)
Q Consensus       280 ~~~v~~g~-~~~~ei  293 (294)
                      +|+++++. .++.|+
T Consensus       239 ~~~v~~~~~~s~~e~  253 (337)
T 1r6d_A          239 IYHIGGGLELTNREL  253 (337)
T ss_dssp             EEEECCCCEEEHHHH
T ss_pred             EEEeCCCCCccHHHH
Confidence            99999875 455543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.89  E-value=1.7e-22  Score=182.55  Aligned_cols=192  Identities=15%  Similarity=0.152  Sum_probs=140.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch------h---hhcCCCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------M---ESFGTYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~------~---~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      +|+|+||||||+||++++++|+++|++|++++|+....      .   .....+++++.+|++|.+++.++++++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            57899999999999999999999999999999985321      1   11245799999999999999999999999999


Q ss_pred             cCCc-------hHHhhhhhcC-CCEEEEecccccccCC-CCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecC-
Q 022625          170 PSEG-------FISNAGSLKG-VQHVILLSQLSVYRGS-GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT-  239 (294)
Q Consensus       170 ~~~~-------~~~~~~~~~g-v~r~V~vSs~~~~~~~-~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~-  239 (294)
                      +.+.       .+.+++++.| ++|||+ |+.+..... ....+.  ...+..|..+|.++++.+++|+++||+.+++. 
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~--~~~y~sK~~~e~~~~~~~~~~~~~r~~~~~~~~  160 (308)
T 1qyc_A           84 TVGSLQIESQVNIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPA--KSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYF  160 (308)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTH--HHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHH
T ss_pred             CCcchhhhhHHHHHHHHHhcCCCceEee-cccccCccccccCCcc--hhHHHHHHHHHHHHHhcCCCeEEEEeceecccc
Confidence            8432       2667888888 999985 654432111 111110  11224466789999999999999999987531 


Q ss_pred             -C----------CCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecC--Ccccccc
Q 022625          240 -P----------GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEI--SNLCEQL  293 (294)
Q Consensus       240 -~----------~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g--~~~~~ei  293 (294)
                       +          ..+....++.++....+++++|+|++++.++.++...++.|++.++  ..+..|+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~  227 (308)
T 1qyc_A          161 LRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNEL  227 (308)
T ss_dssp             TTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHH
T ss_pred             ccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHH
Confidence             1          0111123345566788999999999999999887666888888754  3455543

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.89  E-value=1.5e-21  Score=180.78  Aligned_cols=193  Identities=16%  Similarity=0.110  Sum_probs=141.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHH--CCCeEEEEEcCcc-------------chhhhcCCCcEEeecCCCCHHHHHHH
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIV--KRTRIKALVKDKR-------------NAMESFGTYVESMAGDASNKKFLKTA  160 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~--~g~~V~~~~R~~~-------------~~~~~~~~~v~~v~~D~~d~~~l~~~  160 (294)
                      .+.+|+||||||+||||++++++|++  +|++|++++|+..             ......+.+++++.+|++|.+.+.++
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence            45689999999999999999999999  9999999999764             12222334689999999999999998


Q ss_pred             -hcCCcEEEEcCC--c------------------hHHhhhhhcCCCEEEEecccccccCCCCch----hccchh-HHHHH
Q 022625          161 -LRGVRSIICPSE--G------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ----ALMKGN-ARKLA  214 (294)
Q Consensus       161 -l~~~d~Vi~~~~--~------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~----~~~~~~-~~~~~  214 (294)
                       ..++|+|||+++  .                  .+.+++++.+++ ||++||..++.......    +..+.. +...|
T Consensus        87 ~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK  165 (362)
T 3sxp_A           87 EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPENVYGFSK  165 (362)
T ss_dssp             TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHH
T ss_pred             hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHH
Confidence             889999999832  0                  155667778887 99999988876433211    011111 22245


Q ss_pred             HHHHHHHHhCC--CCEEEEEccceecCCCCCc-------------------c-eeeccCCCCCCCcCHHHHHHHHHHHhh
Q 022625          215 EQDESMLMASG--IPYTIIRTGVLQNTPGGKQ-------------------G-FQFEEGCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       215 ~~ae~~l~~~g--l~~tivRPg~l~~~~~~~~-------------------~-~~~~~g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                      ..+|.+++...  +++++|||+.++ +|+...                   . ..++.+....++++++|+|++++.+++
T Consensus       166 ~~~E~~~~~~~~~~~~~~lR~~~v~-Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~  244 (362)
T 3sxp_A          166 LCMDEFVLSHSNDNVQVGLRYFNVY-GPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMK  244 (362)
T ss_dssp             HHHHHHHHHTTTTSCEEEEEECSEE-STTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhccCCEEEEEeCcee-CcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHh
Confidence            57788877643  899999999988 444211                   1 122445566789999999999999998


Q ss_pred             CCCCCCcEEEEecCC-ccccc
Q 022625          273 SIPQTGLIFEVCEIS-NLCEQ  292 (294)
Q Consensus       273 ~~~~~g~~~~v~~g~-~~~~e  292 (294)
                      .+. .| +|++++++ .++.|
T Consensus       245 ~~~-~g-~~~i~~~~~~s~~e  263 (362)
T 3sxp_A          245 AQK-SG-VYNVGYSQARSYNE  263 (362)
T ss_dssp             CSS-CE-EEEESCSCEEEHHH
T ss_pred             cCC-CC-EEEeCCCCCccHHH
Confidence            764 46 99998875 44444

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.89  E-value=5.4e-22  Score=181.22  Aligned_cols=198  Identities=11%  Similarity=-0.023  Sum_probs=137.5

Q ss_pred             CCCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch-----hhh-cCCCcEEeecCCCCHHHHHHHhcC--C
Q 022625           93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MES-FGTYVESMAGDASNKKFLKTALRG--V  164 (294)
Q Consensus        93 ~~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~-----~~~-~~~~v~~v~~D~~d~~~l~~~l~~--~  164 (294)
                      .....++|+||||||+|+||++++++|+++|++|++++|+..+.     ... ...+++++.+|++|.+.+.+++++  +
T Consensus         8 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   87 (335)
T 1rpn_A            8 HHHGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQP   87 (335)
T ss_dssp             -------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             ccccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCC
Confidence            44556789999999999999999999999999999999987542     111 124688999999999999999986  5


Q ss_pred             cEEEEcCCc----------------------hHHhhhhhcCC-CEEEEecccccccCCCC--ch---hccc-hhHHHHHH
Q 022625          165 RSIICPSEG----------------------FISNAGSLKGV-QHVILLSQLSVYRGSGG--IQ---ALMK-GNARKLAE  215 (294)
Q Consensus       165 d~Vi~~~~~----------------------~~~~~~~~~gv-~r~V~vSs~~~~~~~~~--~~---~~~~-~~~~~~~~  215 (294)
                      |+|||+++.                      .+.+++.+.++ ++||++||..++.....  ..   +..+ ..+...|.
T Consensus        88 d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~  167 (335)
T 1rpn_A           88 QEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKL  167 (335)
T ss_dssp             SEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred             CEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHH
Confidence            999998321                      14456777786 99999999888754321  00   0001 11122344


Q ss_pred             HHHHHHHh----CCCCEEEEEccceecCCCCC--------------------cceeeccCCCCCCCcCHHHHHHHHHHHh
Q 022625          216 QDESMLMA----SGIPYTIIRTGVLQNTPGGK--------------------QGFQFEEGCAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       216 ~ae~~l~~----~gl~~tivRPg~l~~~~~~~--------------------~~~~~~~g~~~~~~Is~eDvA~~iv~aL  271 (294)
                      .+|.+++.    .+++++++||+.++ +++..                    ....++.++...++++++|+|++++.++
T Consensus       168 ~~e~~~~~~~~~~~~~~~i~r~~~v~-Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~  246 (335)
T 1rpn_A          168 YGHWITVNYRESFGLHASSGILFNHE-SPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLML  246 (335)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEE-CTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCcEEEEeeCccc-CCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHH
Confidence            55665543    58999999999987 44211                    0112344566678999999999999999


Q ss_pred             hCCCCCCcEEEEecCC-cccccc
Q 022625          272 ESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       272 ~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      +++.  +++|++++++ .++.|+
T Consensus       247 ~~~~--~~~~ni~~~~~~s~~e~  267 (335)
T 1rpn_A          247 QQDK--ADDYVVATGVTTTVRDM  267 (335)
T ss_dssp             HSSS--CCCEEECCSCEEEHHHH
T ss_pred             hcCC--CCEEEEeCCCCccHHHH
Confidence            8764  4799999875 455543

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.89  E-value=5e-22  Score=179.95  Aligned_cols=190  Identities=17%  Similarity=0.144  Sum_probs=133.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEcCCc----
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG----  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~~----  173 (294)
                      |+||||||+|+||++++++|+++|++|+++.|...........+++++.+|++|.+++.++++  ++|+|||++..    
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~   80 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVK   80 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCch
Confidence            589999999999999999999999999999985433222233468889999999999999998  89999998321    


Q ss_pred             ------------------hHHhhhhhcCCCEEEEeccc-ccccC-C--CCc---hhccc-hhHHHHHHHHHHHHH----h
Q 022625          174 ------------------FISNAGSLKGVQHVILLSQL-SVYRG-S--GGI---QALMK-GNARKLAEQDESMLM----A  223 (294)
Q Consensus       174 ------------------~~~~~~~~~gv~r~V~vSs~-~~~~~-~--~~~---~~~~~-~~~~~~~~~ae~~l~----~  223 (294)
                                        .+.+++.+.+++|||++||. .++.. .  .+.   .+..+ ..+...|..+|.+++    +
T Consensus        81 ~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~  160 (311)
T 2p5y_A           81 VSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQS  160 (311)
T ss_dssp             HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence                              14456777889999999998 55532 1  010   00001 111123444555543    3


Q ss_pred             CCCCEEEEEccceecCCCCC------------------cce-ee-----ccCCCCCCCcCHHHHHHHHHHHhhCCCCCCc
Q 022625          224 SGIPYTIIRTGVLQNTPGGK------------------QGF-QF-----EEGCAANGSLSKEDAAFICVEALESIPQTGL  279 (294)
Q Consensus       224 ~gl~~tivRPg~l~~~~~~~------------------~~~-~~-----~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~  279 (294)
                      .+++++++||+.++ ++...                  ... .+     +.+.....+++++|+|++++.+++++   ++
T Consensus       161 ~~~~~~~lrp~~v~-Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~---~~  236 (311)
T 2p5y_A          161 YGLKWVSLRYGNVY-GPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL---EG  236 (311)
T ss_dssp             HCCCEEEEEECEEE-CTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC---CE
T ss_pred             cCCCEEEEeecccc-CcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC---CC
Confidence            68999999999988 44321                  011 12     34455578899999999999999874   78


Q ss_pred             EEEEecCC-cccccc
Q 022625          280 IFEVCEIS-NLCEQL  293 (294)
Q Consensus       280 ~~~v~~g~-~~~~ei  293 (294)
                      +|++++++ .+++|+
T Consensus       237 ~~~i~~~~~~s~~e~  251 (311)
T 2p5y_A          237 IYNVGTGEGHTTREV  251 (311)
T ss_dssp             EEEESCSCCEEHHHH
T ss_pred             EEEeCCCCCccHHHH
Confidence            99999875 455543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.89  E-value=2.1e-22  Score=183.30  Aligned_cols=192  Identities=12%  Similarity=0.081  Sum_probs=140.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc-c-----chhh---hcCCCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-R-----NAME---SFGTYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~-~-----~~~~---~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      +|+|+||||||+||++++++|+++|++|++++|++ .     +...   ....+++++.+|++|.+++.++++++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~   83 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS   83 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            67899999999999999999999999999999986 2     2111   1235799999999999999999999999999


Q ss_pred             cCCc-------hHHhhhhhcC-CCEEEEecccccccCC-CCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecC-
Q 022625          170 PSEG-------FISNAGSLKG-VQHVILLSQLSVYRGS-GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT-  239 (294)
Q Consensus       170 ~~~~-------~~~~~~~~~g-v~r~V~vSs~~~~~~~-~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~-  239 (294)
                      +.+.       .+.+++++.| ++|||+ |+.+..... ....+.  ...+..|..+|.++++.+++|++|||+.+++. 
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~--~~~y~sK~~~e~~~~~~~~~~~~lrp~~~~~~~  160 (321)
T 3c1o_A           84 ALPFPMISSQIHIINAIKAAGNIKRFLP-SDFGCEEDRIKPLPPF--ESVLEKKRIIRRAIEAAALPYTYVSANCFGAYF  160 (321)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCCEEEC-SCCSSCGGGCCCCHHH--HHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHH
T ss_pred             CCCccchhhHHHHHHHHHHhCCccEEec-cccccCccccccCCCc--chHHHHHHHHHHHHHHcCCCeEEEEeceecccc
Confidence            8432       2677888888 999983 543321110 111110  11124466789999999999999999987531 


Q ss_pred             -----------CCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecC--Ccccccc
Q 022625          240 -----------PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEI--SNLCEQL  293 (294)
Q Consensus       240 -----------~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g--~~~~~ei  293 (294)
                                 ...+....++.++....+++++|+|++++.++.++...+++|++.++  ..+..|+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~  227 (321)
T 3c1o_A          161 VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNEL  227 (321)
T ss_dssp             HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHH
T ss_pred             ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHH
Confidence                       11122233455667788999999999999999987777888888753  4455543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.88  E-value=9.5e-22  Score=179.69  Aligned_cols=194  Identities=15%  Similarity=0.094  Sum_probs=133.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCcc--c---hhhhc-CCCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR--N---AMESF-GTYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~--~---~~~~~-~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      .+|+||||||+||||++++++|+++|  ++|++++|+..  .   +.... ..+++++.+|++|.+.+.+++.++|+|||
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   81 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVH   81 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEE
Confidence            35789999999999999999999996  89999998642  1   11111 24688999999999999999999999999


Q ss_pred             cCCc----------------------hHHhhhhhcCC-CEEEEecccccccCCC--Cch---hccc-hhHHHHHHHHHHH
Q 022625          170 PSEG----------------------FISNAGSLKGV-QHVILLSQLSVYRGSG--GIQ---ALMK-GNARKLAEQDESM  220 (294)
Q Consensus       170 ~~~~----------------------~~~~~~~~~gv-~r~V~vSs~~~~~~~~--~~~---~~~~-~~~~~~~~~ae~~  220 (294)
                      +++.                      .+.+++...+. +|||++||..++....  +..   +..+ ..+...|..+|.+
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~  161 (336)
T 2hun_A           82 LAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDML  161 (336)
T ss_dssp             CCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHH
T ss_pred             CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHH
Confidence            8321                      03445666664 7999999988764321  000   0001 1112234455555


Q ss_pred             HH----hCCCCEEEEEccceecCCCCC---------------cce-eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcE
Q 022625          221 LM----ASGIPYTIIRTGVLQNTPGGK---------------QGF-QFEEGCAANGSLSKEDAAFICVEALESIPQTGLI  280 (294)
Q Consensus       221 l~----~~gl~~tivRPg~l~~~~~~~---------------~~~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~  280 (294)
                      ++    +.+++++++||+.++ ++...               ... .++.+.....+++++|+|++++.+++++ ..+++
T Consensus       162 ~~~~~~~~~~~~~ilrp~~v~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~~g~~  239 (336)
T 2hun_A          162 VLGWTRTYNLNASITRCTNNY-GPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKG-ESREI  239 (336)
T ss_dssp             HHHHHHHTTCEEEEEEECEEE-STTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHC-CTTCE
T ss_pred             HHHHHHHhCCCEEEEeeeeee-CcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCC-CCCCE
Confidence            44    368999999999988 44321               111 1234455678999999999999999764 46889


Q ss_pred             EEEecCC-cccccc
Q 022625          281 FEVCEIS-NLCEQL  293 (294)
Q Consensus       281 ~~v~~g~-~~~~ei  293 (294)
                      |+++++. .++.|+
T Consensus       240 ~~v~~~~~~s~~e~  253 (336)
T 2hun_A          240 YNISAGEEKTNLEV  253 (336)
T ss_dssp             EEECCSCEECHHHH
T ss_pred             EEeCCCCcccHHHH
Confidence            9999875 455543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.88  E-value=6.1e-22  Score=176.46  Aligned_cols=174  Identities=12%  Similarity=0.063  Sum_probs=134.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC-----
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-----  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~-----  172 (294)
                      .+|+|+||||+|+||++++++|+++|++|++++|++.+..   ..+++++.+|++|.+++.++++++|+|||+++     
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~   78 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEK   78 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcC
Confidence            4689999999999999999999999999999999986644   45789999999999999999999999999832     


Q ss_pred             c-------------hHHhhhhhcCCCEEEEecccccccCC------------CCchhccchhHHHHHHHHHHHH----Hh
Q 022625          173 G-------------FISNAGSLKGVQHVILLSQLSVYRGS------------GGIQALMKGNARKLAEQDESML----MA  223 (294)
Q Consensus       173 ~-------------~~~~~~~~~gv~r~V~vSs~~~~~~~------------~~~~~~~~~~~~~~~~~ae~~l----~~  223 (294)
                      .             .+.+++++.+++|||++||..++...            .+...|..     .|..+|.++    .+
T Consensus        79 ~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~-----sK~~~e~~~~~~a~~  153 (267)
T 3rft_A           79 PFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGV-----SKCFGENLARMYFDK  153 (267)
T ss_dssp             CHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHH-----HHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHH-----HHHHHHHHHHHHHHH
Confidence            1             15566788899999999998877311            11122322     232334433    35


Q ss_pred             CCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 022625          224 SGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       224 ~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                      .++++++|||+.++..+..        +.....+++++|+++++..+++.+...+.++++.+++
T Consensus       154 ~g~~~~~vr~~~v~~~~~~--------~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~  209 (267)
T 3rft_A          154 FGQETALVRIGSCTPEPNN--------YRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASAN  209 (267)
T ss_dssp             HCCCEEEEEECBCSSSCCS--------TTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCC
T ss_pred             hCCeEEEEEeecccCCCCC--------CCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCC
Confidence            7999999999999854322        2233567999999999999999877666778877764

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.88  E-value=6.7e-22  Score=181.26  Aligned_cols=195  Identities=11%  Similarity=0.093  Sum_probs=139.2

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHHhcC--CcEEEE
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRG--VRSIIC  169 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~  169 (294)
                      .....+|+|+||||+|+||++++++|+++|++|++++|+.....+...  .+++++.+|++|.+.+.+++++  +|+|||
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih   95 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVH   95 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEE
Confidence            345568999999999999999999999999999999998654322222  4688999999999999999988  999999


Q ss_pred             cCC---c----------------hHHhhhhhcCCCEEEEeccccccc----CCCCc-hhc-cc--hhHHHHHHHHHHHHH
Q 022625          170 PSE---G----------------FISNAGSLKGVQHVILLSQLSVYR----GSGGI-QAL-MK--GNARKLAEQDESMLM  222 (294)
Q Consensus       170 ~~~---~----------------~~~~~~~~~gv~r~V~vSs~~~~~----~~~~~-~~~-~~--~~~~~~~~~ae~~l~  222 (294)
                      +++   .                .+.+++.+.++++||++||..++.    ..... .+. .+  ..+...|..+|.+++
T Consensus        96 ~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~  175 (333)
T 2q1w_A           96 TAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLE  175 (333)
T ss_dssp             CCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHH
T ss_pred             CceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHH
Confidence            822   1                145567778899999999988875    22100 000 01  112223557788887


Q ss_pred             h-CCCCEEEEEccceecCCCCCcc-------------eeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-
Q 022625          223 A-SGIPYTIIRTGVLQNTPGGKQG-------------FQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-  287 (294)
Q Consensus       223 ~-~gl~~tivRPg~l~~~~~~~~~-------------~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-  287 (294)
                      . .. ++++|||+.++ +++....             ..++ +.....+++++|+|++++.+++++.  +++|+++++. 
T Consensus       176 ~s~~-~~~ilR~~~v~-gp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--g~~~~v~~~~~  250 (333)
T 2q1w_A          176 YSGL-DFVTFRLANVV-GPRNVSGPLPIFFQRLSEGKKCFV-TKARRDFVFVKDLARATVRAVDGVG--HGAYHFSSGTD  250 (333)
T ss_dssp             HHTC-CEEEEEESEEE-STTCCSSHHHHHHHHHHTTCCCEE-EECEECEEEHHHHHHHHHHHHTTCC--CEEEECSCSCC
T ss_pred             hhhC-CeEEEeeceEE-CcCCcCcHHHHHHHHHHcCCeeeC-CCceEeeEEHHHHHHHHHHHHhcCC--CCEEEeCCCCC
Confidence            7 55 99999999888 4432100             1122 4455678999999999999998765  8999998874 


Q ss_pred             cccccc
Q 022625          288 NLCEQL  293 (294)
Q Consensus       288 ~~~~ei  293 (294)
                      .++.|+
T Consensus       251 ~s~~e~  256 (333)
T 2q1w_A          251 VAIKEL  256 (333)
T ss_dssp             EEHHHH
T ss_pred             ccHHHH
Confidence            455543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.88  E-value=3.6e-22  Score=181.66  Aligned_cols=192  Identities=11%  Similarity=0.106  Sum_probs=141.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc-chhh---hcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc-
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~-~~~~---~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-  173 (294)
                      +++|+||||||+||++++++|+++|++|++++|+++ +...   ....+++++.+|++|.+++.++++++|+|||+.+. 
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~   90 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP   90 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh
Confidence            468999999999999999999999999999999875 3221   12357999999999999999999999999998432 


Q ss_pred             ------hHHhhhhhcC-CCEEEEecccccccCC-CCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecC------
Q 022625          174 ------FISNAGSLKG-VQHVILLSQLSVYRGS-GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT------  239 (294)
Q Consensus       174 ------~~~~~~~~~g-v~r~V~vSs~~~~~~~-~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~------  239 (294)
                            .+.+++++.| ++|||+ |+.+..... ....+.  ...+..|..+|.++++.+++|++|||+.+++.      
T Consensus        91 ~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~--~~~y~sK~~~e~~~~~~~~~~~~lr~~~~~~~~~~~~~  167 (318)
T 2r6j_A           91 QILDQFKILEAIKVAGNIKRFLP-SDFGVEEDRINALPPF--EALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLL  167 (318)
T ss_dssp             GSTTHHHHHHHHHHHCCCCEEEC-SCCSSCTTTCCCCHHH--HHHHHHHHHHHHHHHHTTCCBEEEECCEEHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhcCCCCEEEe-eccccCcccccCCCCc--chhHHHHHHHHHHHHhcCCCeEEEEcceehhhhhhhhc
Confidence                  2667888888 999985 554322111 111110  11224466789999999999999999986531      


Q ss_pred             -C--CCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecC--Ccccccc
Q 022625          240 -P--GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEI--SNLCEQL  293 (294)
Q Consensus       240 -~--~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g--~~~~~ei  293 (294)
                       .  .......++.++....+++++|+|++++.++.++...++.|++.++  ..+..|+
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~  226 (318)
T 2r6j_A          168 RPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLEL  226 (318)
T ss_dssp             CTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHH
T ss_pred             cccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHH
Confidence             1  1222233455667788999999999999999887666888888753  3455443

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.88  E-value=1.4e-21  Score=179.44  Aligned_cols=194  Identities=18%  Similarity=0.146  Sum_probs=134.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc----------hhhh---cCCCcEEeecCCCCHHHHHHHhc--C
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----------AMES---FGTYVESMAGDASNKKFLKTALR--G  163 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~----------~~~~---~~~~v~~v~~D~~d~~~l~~~l~--~  163 (294)
                      +|+|+||||+|+||++++++|+++|++|++++|+...          ....   .+.+++++.+|++|.+++.++++  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            5899999999999999999999999999999986432          1111   23578999999999999999998  8


Q ss_pred             CcEEEEcCCc----------------------hHHhhhhhcCCCEEEEecccccccCCCC--ch---hccc--hhHHHHH
Q 022625          164 VRSIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ---ALMK--GNARKLA  214 (294)
Q Consensus       164 ~d~Vi~~~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~---~~~~--~~~~~~~  214 (294)
                      +|+|||+++.                      .+.+++++.++++||++||..++.....  ..   +..+  ..+...|
T Consensus        82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK  161 (348)
T 1ek6_A           82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK  161 (348)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred             CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHH
Confidence            9999998321                      1445677788999999999888753210  00   0000  1112234


Q ss_pred             HHHHHHHHh---CC--CCEEEEEccceecCCCC--------------------------Cccee-ec------cCCCCCC
Q 022625          215 EQDESMLMA---SG--IPYTIIRTGVLQNTPGG--------------------------KQGFQ-FE------EGCAANG  256 (294)
Q Consensus       215 ~~ae~~l~~---~g--l~~tivRPg~l~~~~~~--------------------------~~~~~-~~------~g~~~~~  256 (294)
                      ..+|.+++.   .+  ++++++||+.++ ++..                          ...+. ++      .|....+
T Consensus       162 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~-G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  240 (348)
T 1ek6_A          162 FFIEEMIRDLCQADKTWNAVLLRYFNPT-GAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD  240 (348)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEEEECEEE-CCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred             HHHHHHHHHHHhcCCCcceEEEeecccc-CCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEe
Confidence            455555543   24  999999999887 3310                          00011 11      2345568


Q ss_pred             CcCHHHHHHHHHHHhhCCC-CCC-cEEEEecCC-cccccc
Q 022625          257 SLSKEDAAFICVEALESIP-QTG-LIFEVCEIS-NLCEQL  293 (294)
Q Consensus       257 ~Is~eDvA~~iv~aL~~~~-~~g-~~~~v~~g~-~~~~ei  293 (294)
                      +++++|+|++++.+++++. ..+ ++||+++++ .+++|+
T Consensus       241 ~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~  280 (348)
T 1ek6_A          241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQM  280 (348)
T ss_dssp             EEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHH
T ss_pred             eEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHH
Confidence            8999999999999998653 344 899998874 555553

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.87  E-value=2.3e-21  Score=181.17  Aligned_cols=194  Identities=15%  Similarity=0.135  Sum_probs=134.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEEcCccch---------hhh------c-----CCC---cEEeecCCCCH
Q 022625           99 RDAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKRNA---------MES------F-----GTY---VESMAGDASNK  154 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~-~~g~~V~~~~R~~~~~---------~~~------~-----~~~---v~~v~~D~~d~  154 (294)
                      +|+||||||+|+||++++++|+ ++|++|++++|+....         ...      .     ..+   ++++.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4799999999999999999999 9999999999976432         111      0     124   88999999999


Q ss_pred             HHHHHHhc--C-CcEEEEcCCc----------------------hHHhhhhhcCCCEEEEecccccccCCC---------
Q 022625          155 KFLKTALR--G-VRSIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSG---------  200 (294)
Q Consensus       155 ~~l~~~l~--~-~d~Vi~~~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~---------  200 (294)
                      +.+.++++  + +|+|||+++.                      .+.+++.+.++++||++||..++....         
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  161 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence            99999987  6 9999998321                      044567778999999999988775332         


Q ss_pred             Cchh---ccc-hhHHHHHHHHHHHHHh----CCCCEEEEEccceecCCCC-----------Cc-----------------
Q 022625          201 GIQA---LMK-GNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPGG-----------KQ-----------------  244 (294)
Q Consensus       201 ~~~~---~~~-~~~~~~~~~ae~~l~~----~gl~~tivRPg~l~~~~~~-----------~~-----------------  244 (294)
                      +...   ..+ ..+...|..+|.+++.    .++++++|||+.++ ++..           ..                 
T Consensus       162 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~-G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  240 (397)
T 1gy8_A          162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNAC-GAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ  240 (397)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE-CCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-
T ss_pred             CcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEecccee-CCCccccccccccchhHHHHHHHHHHHHHHHhcC
Confidence            0000   000 1112234455555543    59999999999987 3320           00                 


Q ss_pred             ------------ce-eec------cCCCCCCCcCHHHHHHHHHHHhhCCCCC-----C---cEEEEecCC-cccccc
Q 022625          245 ------------GF-QFE------EGCAANGSLSKEDAAFICVEALESIPQT-----G---LIFEVCEIS-NLCEQL  293 (294)
Q Consensus       245 ------------~~-~~~------~g~~~~~~Is~eDvA~~iv~aL~~~~~~-----g---~~~~v~~g~-~~~~ei  293 (294)
                                  .+ .++      .|....++|+++|+|++++.+++.+...     +   ++||+++++ .+++|+
T Consensus       241 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~  317 (397)
T 1gy8_A          241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREV  317 (397)
T ss_dssp             ----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHH
T ss_pred             ccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHH
Confidence                        01 011      2344567899999999999999764322     3   899998764 555554

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.87  E-value=2.9e-22  Score=171.64  Aligned_cols=174  Identities=14%  Similarity=0.073  Sum_probs=132.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc--
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG--  173 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~--  173 (294)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|++++    ...+++++.+|++|.+++.+++  +|+|||+.+.  
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~   77 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTI   77 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCH
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----cCCCceEEeccccCHHHHHHhh--hcEEEECeeecc
Confidence            468999999999999999999999998  99999998876    2346889999999998888777  9999998321  


Q ss_pred             ------------------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCC-EEEEEcc
Q 022625          174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIRTG  234 (294)
Q Consensus       174 ------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~-~tivRPg  234 (294)
                                        .+.+++++.+++|||++||..++.++.  ..|     ...|..+|.++++.+++ +++|||+
T Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~--~~y-----~~sK~~~e~~~~~~~~~~~~~vrp~  150 (215)
T 2a35_A           78 KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSS--IFY-----NRVKGELEQALQEQGWPQLTIARPS  150 (215)
T ss_dssp             HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS--SHH-----HHHHHHHHHHHTTSCCSEEEEEECC
T ss_pred             ccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCCc--cHH-----HHHHHHHHHHHHHcCCCeEEEEeCc
Confidence                              144567778999999999998875432  233     22356788889889999 9999999


Q ss_pred             ceecCCCCCcce-------eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 022625          235 VLQNTPGGKQGF-------QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       235 ~l~~~~~~~~~~-------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                      .++ ++......       ....+....++++++|+|++++.++.++.  +++|++++++
T Consensus       151 ~v~-g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~~~  207 (215)
T 2a35_A          151 LLF-GPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG--KGVRFVESDE  207 (215)
T ss_dssp             SEE-STTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC--SEEEEEEHHH
T ss_pred             eee-CCCCcchHHHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC--CCceEEcHHH
Confidence            988 43321100       00111113467899999999999998864  7899998764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.87  E-value=1.2e-21  Score=177.81  Aligned_cols=181  Identities=13%  Similarity=0.116  Sum_probs=132.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEcCC--c
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE--G  173 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~--~  173 (294)
                      .+|+|+||||+|+||++++++|+++|++|+++.|+.              .+|++|.+.+.++++  ++|+|||+++  .
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   67 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------ELNLLDSRAVHDFFASERIDQVYLAAAKVG   67 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------cCCccCHHHHHHHHHhcCCCEEEEcCeecC
Confidence            357999999999999999999999999999987763              379999999999999  9999999822  1


Q ss_pred             ---------------------hHHhhhhhcCCCEEEEecccccccCCC--Cch-------hccc--hhHHHHHHHHHHHH
Q 022625          174 ---------------------FISNAGSLKGVQHVILLSQLSVYRGSG--GIQ-------ALMK--GNARKLAEQDESML  221 (294)
Q Consensus       174 ---------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~--~~~-------~~~~--~~~~~~~~~ae~~l  221 (294)
                                           .+.+++.+.+++||||+||..++....  +..       ...+  ..+...|..+|.++
T Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~  147 (321)
T 1e6u_A           68 GIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLC  147 (321)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred             CcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHH
Confidence                                 144567778999999999998875321  100       0111  11222344566665


Q ss_pred             Hh----CCCCEEEEEccceecCCCCC------------------------cce-eeccCCCCCCCcCHHHHHHHHHHHhh
Q 022625          222 MA----SGIPYTIIRTGVLQNTPGGK------------------------QGF-QFEEGCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       222 ~~----~gl~~tivRPg~l~~~~~~~------------------------~~~-~~~~g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                      +.    .++++++|||+.++ +++..                        ... .++.+....++++++|+|++++.+++
T Consensus       148 ~~~~~~~~~~~~ilrp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~  226 (321)
T 1e6u_A          148 ESYNRQYGRDYRSVMPTNLY-GPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVME  226 (321)
T ss_dssp             HHHHHHHCCEEEEEEECEEE-STTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCEEEEEeCCcC-CcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHh
Confidence            54    58999999999988 44321                        111 13445666789999999999999998


Q ss_pred             CCCC--------CCcEEEEecCC-cccccc
Q 022625          273 SIPQ--------TGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       273 ~~~~--------~g~~~~v~~g~-~~~~ei  293 (294)
                      ++..        .+++||+++++ .++.|+
T Consensus       227 ~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~  256 (321)
T 1e6u_A          227 LAHEVWLENTQPMLSHINVGTGVDCTIREL  256 (321)
T ss_dssp             SCHHHHHHTSBTTBCCEEESCSCCEEHHHH
T ss_pred             CcccccccccccCCceEEeCCCCCccHHHH
Confidence            8654        26899998874 555553

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.87  E-value=7.5e-22  Score=175.36  Aligned_cols=173  Identities=14%  Similarity=0.018  Sum_probs=131.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC-----c
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-----G  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~-----~  173 (294)
                      +|+|+||||+|+||++++++|+++|++|++++|++.+..   ..+++++.+|++|.+.+.++++++|+|||+.+     .
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~   78 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVERP   78 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSCCC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---CCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCCCC
Confidence            468999999999999999999999999999999876432   24678999999999999999999999999832     1


Q ss_pred             -------------hHHhhhhhcCCCEEEEecccccccCCC------------CchhccchhHHHHHHHHHHHH----HhC
Q 022625          174 -------------FISNAGSLKGVQHVILLSQLSVYRGSG------------GIQALMKGNARKLAEQDESML----MAS  224 (294)
Q Consensus       174 -------------~~~~~~~~~gv~r~V~vSs~~~~~~~~------------~~~~~~~~~~~~~~~~ae~~l----~~~  224 (294)
                                   .+.+++.+.+++|||++||..++....            +...|.     ..|..+|.++    ...
T Consensus        79 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~-----~sK~~~e~~~~~~~~~~  153 (267)
T 3ay3_A           79 WNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYG-----LSKCFGEDLASLYYHKF  153 (267)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHH-----HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHH-----HHHHHHHHHHHHHHHHc
Confidence                         145567778899999999998765321            112221     1233444444    347


Q ss_pred             CCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 022625          225 GIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       225 gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                      ++++++|||+.+++.+..        +.....+++++|+|++++.+++++...+.+|++.++.
T Consensus       154 gi~~~~lrp~~v~~~~~~--------~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~  208 (267)
T 3ay3_A          154 DIETLNIRIGSCFPKPKD--------ARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASAN  208 (267)
T ss_dssp             CCCEEEEEECBCSSSCCS--------HHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSC
T ss_pred             CCCEEEEeceeecCCCCC--------CCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCc
Confidence            999999999998743321        1223568999999999999999876556788887654

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.87  E-value=4.8e-21  Score=176.65  Aligned_cols=192  Identities=13%  Similarity=0.064  Sum_probs=135.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCcc--chhhh---c-CCCcEEeecCCCCHHHHHHHhc--CCcEEEEc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR--NAMES---F-GTYVESMAGDASNKKFLKTALR--GVRSIICP  170 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~--~~~~~---~-~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~  170 (294)
                      |+||||||+|+||++++++|+++ |++|++++|+..  .....   . ..+++++.+|++|.+.+.++++  ++|+|||+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            57999999999999999999998 799999998652  21111   1 2468899999999999999998  89999998


Q ss_pred             CCc----------------------hHHhhhhhc--CCC-------EEEEecccccccCCC------------Cch---h
Q 022625          171 SEG----------------------FISNAGSLK--GVQ-------HVILLSQLSVYRGSG------------GIQ---A  204 (294)
Q Consensus       171 ~~~----------------------~~~~~~~~~--gv~-------r~V~vSs~~~~~~~~------------~~~---~  204 (294)
                      ++.                      .+.+++.+.  +++       |||++||..++....            +..   +
T Consensus        81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~  160 (361)
T 1kew_A           81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCC
Confidence            321                      034456666  887       999999987764321            000   0


Q ss_pred             ccc-hhHHHHHHHHHHHHHh----CCCCEEEEEccceecCCCCC----------------cceeeccCCCCCCCcCHHHH
Q 022625          205 LMK-GNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPGGK----------------QGFQFEEGCAANGSLSKEDA  263 (294)
Q Consensus       205 ~~~-~~~~~~~~~ae~~l~~----~gl~~tivRPg~l~~~~~~~----------------~~~~~~~g~~~~~~Is~eDv  263 (294)
                      ..+ ..+...|..+|.+++.    .++++++|||+.++ ++...                ....++.+.....+++++|+
T Consensus       161 ~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  239 (361)
T 1kew_A          161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNY-GPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE-STTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeE-CCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHH
Confidence            111 1112234455555543    58999999999988 44321                01122344556788999999


Q ss_pred             HHHHHHHhhCCCCCCcEEEEecCC-cccccc
Q 022625          264 AFICVEALESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       264 A~~iv~aL~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      |++++.+++.+ ..|++|+++++. .++.|+
T Consensus       240 a~a~~~~~~~~-~~g~~~~v~~~~~~s~~e~  269 (361)
T 1kew_A          240 ARALHMVVTEG-KAGETYNIGGHNEKKNLDV  269 (361)
T ss_dssp             HHHHHHHHHHC-CTTCEEEECCCCEEEHHHH
T ss_pred             HHHHHHHHhCC-CCCCEEEecCCCeeeHHHH
Confidence            99999999764 468899999885 455553

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.87  E-value=9.9e-22  Score=176.91  Aligned_cols=185  Identities=12%  Similarity=0.084  Sum_probs=131.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcC--CcEEEEcCCc-
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG-  173 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~~~~~-  173 (294)
                      +.+|+||||||+|+||++++++|+++|+      +....     ...++++.+|++|.+.+.+++++  +|+|||++.. 
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~   72 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED-----WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMV   72 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE-----EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc-----ccccCceecccCCHHHHHHHHhhcCCCEEEECceec
Confidence            4679999999999999999999999998      11111     12456678999999999999987  8999998221 


Q ss_pred             ----------------------hHHhhhhhcCCCEEEEecccccccCCCC--ch-------hccchh--HHHHHHHHHHH
Q 022625          174 ----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ-------ALMKGN--ARKLAEQDESM  220 (294)
Q Consensus       174 ----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~-------~~~~~~--~~~~~~~ae~~  220 (294)
                                            .+.+++++.+++||||+||..++.....  ..       +..+..  +...|..+|.+
T Consensus        73 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~  152 (319)
T 4b8w_A           73 GGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQ  152 (319)
T ss_dssp             CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHH
T ss_pred             ccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHH
Confidence                                  1456788889999999999988753221  10       000111  11234455655


Q ss_pred             HH----hCCCCEEEEEccceecCCCCC-----------------------cc-eeeccCCCCCCCcCHHHHHHHHHHHhh
Q 022625          221 LM----ASGIPYTIIRTGVLQNTPGGK-----------------------QG-FQFEEGCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       221 l~----~~gl~~tivRPg~l~~~~~~~-----------------------~~-~~~~~g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                      ++    +.+++++++||+.++ +++..                       .. ..++.+....++++++|+|++++.++.
T Consensus       153 ~~~~~~~~~~~~~ilRp~~v~-Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~  231 (319)
T 4b8w_A          153 NRAYFQQYGCTFTAVIPTNVF-GPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLR  231 (319)
T ss_dssp             HHHHHHHHCCEEEEEEECEEE-CTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHhhCCCEEEEeecccc-CCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHh
Confidence            54    379999999999988 44321                       01 123455666788999999999999998


Q ss_pred             CCC-CCCcEEEEecC-Ccccccc
Q 022625          273 SIP-QTGLIFEVCEI-SNLCEQL  293 (294)
Q Consensus       273 ~~~-~~g~~~~v~~g-~~~~~ei  293 (294)
                      ++. ..+++||++++ ..++.|+
T Consensus       232 ~~~~~~~~~~ni~~~~~~s~~e~  254 (319)
T 4b8w_A          232 EYNEVEPIILSVGEEDEVSIKEA  254 (319)
T ss_dssp             HCCCSSCEEECCCGGGCEEHHHH
T ss_pred             ccccCCceEEEecCCCceeHHHH
Confidence            744 55789999876 4555543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.87  E-value=1.9e-21  Score=169.86  Aligned_cols=181  Identities=13%  Similarity=0.127  Sum_probs=134.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc-
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-  173 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-  173 (294)
                      +.+|+|+||||+|+||++++++|+++|+  +|++++|++++........++++.+|++|.+++.++++++|+|||+.+. 
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~   95 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT   95 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence            3578999999999999999999999999  9999999987654333346889999999999999999999999998431 


Q ss_pred             ------------------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCC-EEEEEcc
Q 022625          174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIRTG  234 (294)
Q Consensus       174 ------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~-~tivRPg  234 (294)
                                        .+.+++++.++++||++||..++.+..  ..|.     ..|..+|.+++..+++ +++||||
T Consensus        96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~--~~Y~-----~sK~~~e~~~~~~~~~~~~~vrpg  168 (242)
T 2bka_A           96 RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSN--FLYL-----QVKGEVEAKVEELKFDRYSVFRPG  168 (242)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS--SHHH-----HHHHHHHHHHHTTCCSEEEEEECC
T ss_pred             cccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCCc--chHH-----HHHHHHHHHHHhcCCCCeEEEcCc
Confidence                              134557778899999999998875422  2332     2355788888888994 9999999


Q ss_pred             ceecCCCCCcce----------eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecC
Q 022625          235 VLQNTPGGKQGF----------QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEI  286 (294)
Q Consensus       235 ~l~~~~~~~~~~----------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g  286 (294)
                      .++ ++......          ..+.......+++++|+|+++++++.++... ..|.+.++
T Consensus       169 ~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~-~~~~~~~~  228 (242)
T 2bka_A          169 VLL-CDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDK-QMELLENK  228 (242)
T ss_dssp             EEE-CTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCCS-SEEEEEHH
T ss_pred             eec-CCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCcccc-CeeEeeHH
Confidence            988 33211100          0010011245789999999999999876553 46666543

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.87  E-value=2.3e-21  Score=173.45  Aligned_cols=173  Identities=14%  Similarity=0.110  Sum_probs=131.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEcCCc-----
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG-----  173 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~~-----  173 (294)
                      +|+||||+|+||++++++|+++|++|++++|               ..+|++|.+.+.++++  ++|+|||+++.     
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r---------------~~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~   71 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDK---------------KLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQ   71 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECT---------------TTSCTTCHHHHHHHHHHHCCSEEEECCCCCCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecc---------------cccCCCCHHHHHHHHHhcCCCEEEECCcccChHH
Confidence            8999999999999999999999999999999               2489999999999998  69999998321     


Q ss_pred             -----------------hHHhhhhhcCCCEEEEecccccccCCCC--ch---hccc-hhHHHHHHHHHHHHHhCCCCEEE
Q 022625          174 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ---ALMK-GNARKLAEQDESMLMASGIPYTI  230 (294)
Q Consensus       174 -----------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~---~~~~-~~~~~~~~~ae~~l~~~gl~~ti  230 (294)
                                       .+.+++++.++ ||||+||..++.....  ..   +..+ ..+...|..+|.+++....++++
T Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~i  150 (287)
T 3sc6_A           72 AEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFI  150 (287)
T ss_dssp             HTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEEE
T ss_pred             HhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEE
Confidence                             15566777887 7999999988754311  10   0111 11233466789998887889999


Q ss_pred             EEccceecCCCC-------------CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cccccc
Q 022625          231 IRTGVLQNTPGG-------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       231 vRPg~l~~~~~~-------------~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      +||+.++ ++..             +....+ .++...++++++|+|++++.++.++.  +++|++++++ .++.|+
T Consensus       151 lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~~~~s~~e~  223 (287)
T 3sc6_A          151 VRTSWLY-GKYGNNFVKTMIRLGKEREEISV-VADQIGSPTYVADLNVMINKLIHTSL--YGTYHVSNTGSCSWFEF  223 (287)
T ss_dssp             EEECSEE-CSSSCCHHHHHHHHHTTCSEEEE-ECSCEECCEEHHHHHHHHHHHHTSCC--CEEEECCCBSCEEHHHH
T ss_pred             Eeeeeec-CCCCCcHHHHHHHHHHcCCCeEe-ecCcccCceEHHHHHHHHHHHHhCCC--CCeEEEcCCCcccHHHH
Confidence            9999998 4431             111222 34566889999999999999998876  7799999976 555543

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.87  E-value=8.5e-21  Score=182.88  Aligned_cols=199  Identities=15%  Similarity=0.139  Sum_probs=141.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHC---CCeEEEEEcCccchh------h---------------hcCCCcEEeecC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVK---RTRIKALVKDKRNAM------E---------------SFGTYVESMAGD  150 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~---g~~V~~~~R~~~~~~------~---------------~~~~~v~~v~~D  150 (294)
                      ....+|+|+||||+|+||++++++|+++   |++|++++|+.+...      +               ....+++++.+|
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            3456899999999999999999999999   999999999875421      1               122579999999


Q ss_pred             CC------CHHHHHHHhcCCcEEEEcCCc------------------hHHhhhhhcCCCEEEEecccccccCCCCc----
Q 022625          151 AS------NKKFLKTALRGVRSIICPSEG------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI----  202 (294)
Q Consensus       151 ~~------d~~~l~~~l~~~d~Vi~~~~~------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~----  202 (294)
                      ++      |.+.+.++++++|+|||+++.                  .+.+++.+.++++|||+||..++......    
T Consensus       149 l~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E  228 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTE  228 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCS
T ss_pred             CCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCC
Confidence            98      778899999999999998321                  15667788899999999998876532110    


Q ss_pred             ----hhccc---------hhHHHHHHHHHHHHHh----CCCCEEEEEccceecCCC-CC----cce------------ee
Q 022625          203 ----QALMK---------GNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPG-GK----QGF------------QF  248 (294)
Q Consensus       203 ----~~~~~---------~~~~~~~~~ae~~l~~----~gl~~tivRPg~l~~~~~-~~----~~~------------~~  248 (294)
                          .+..+         ..+...|..+|.++++    .|++++++|||.+++... .+    ...            .+
T Consensus       229 ~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~  308 (478)
T 4dqv_A          229 DADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIA  308 (478)
T ss_dssp             SSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEE
T ss_pred             cccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcc
Confidence                00000         0122235566666654    599999999999984211 10    000            00


Q ss_pred             cc-----------CCCCCCCcCHHHHHHHHHHHhhC----CCCCCcEEEEecCCc---ccccc
Q 022625          249 EE-----------GCAANGSLSKEDAAFICVEALES----IPQTGLIFEVCEISN---LCEQL  293 (294)
Q Consensus       249 ~~-----------g~~~~~~Is~eDvA~~iv~aL~~----~~~~g~~~~v~~g~~---~~~ei  293 (294)
                      +.           +....++++++|+|++++.++.+    +...+++||+++++.   ++.|+
T Consensus       309 P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el  371 (478)
T 4dqv_A          309 PRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEY  371 (478)
T ss_dssp             ESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHH
T ss_pred             cccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHH
Confidence            00           13456889999999999999886    556789999999863   44443

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.87  E-value=1.1e-21  Score=177.68  Aligned_cols=184  Identities=16%  Similarity=0.069  Sum_probs=129.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc----hhhh---c-CCCcEEeecCCCCHHHHHHHhcCCcEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AMES---F-GTYVESMAGDASNKKFLKTALRGVRSII  168 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~----~~~~---~-~~~v~~v~~D~~d~~~l~~~l~~~d~Vi  168 (294)
                      ..+|+||||||||+||++++++|+++|++|++++|+...    ....   . ..+++++.+|++          ++|+||
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi   74 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLVY   74 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEEE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEEE
Confidence            357899999999999999999999999999999998762    1111   1 134666666665          899999


Q ss_pred             EcCCc---------------------hHHhhhhhcCCCEEEEecccccccCCCC--ch---hccc-hhHHHHHHHHHHHH
Q 022625          169 CPSEG---------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ---ALMK-GNARKLAEQDESML  221 (294)
Q Consensus       169 ~~~~~---------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~---~~~~-~~~~~~~~~ae~~l  221 (294)
                      |+++.                     .+.+++++.+++||||+||..++.....  ..   +..+ ..+...|..+|.++
T Consensus        75 ~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~  154 (321)
T 3vps_A           75 HLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVA  154 (321)
T ss_dssp             ECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             ECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence            98321                     1556778889999999999988764321  00   0111 11122344556655


Q ss_pred             Hh----CCC-CEEEEEccceecCCCCCc----------------ceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcE
Q 022625          222 MA----SGI-PYTIIRTGVLQNTPGGKQ----------------GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLI  280 (294)
Q Consensus       222 ~~----~gl-~~tivRPg~l~~~~~~~~----------------~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~  280 (294)
                      +.    .++ +++++||+.++ +++...                ...++.+....++++++|+|++++.++.++.. | +
T Consensus       155 ~~~~~~~~~~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g-~  231 (321)
T 3vps_A          155 GAHQRASVAPEVGIVRFFNVY-GPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-S-V  231 (321)
T ss_dssp             HHHHHSSSSCEEEEEEECEEE-CTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-S-E
T ss_pred             HHHHHHcCCCceEEEEecccc-CcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-C-e
Confidence            54    689 99999999998 443211                12234566778999999999999999988766 6 9


Q ss_pred             EEEecCC-cccccc
Q 022625          281 FEVCEIS-NLCEQL  293 (294)
Q Consensus       281 ~~v~~g~-~~~~ei  293 (294)
                      |++++++ .++.|+
T Consensus       232 ~~i~~~~~~s~~e~  245 (321)
T 3vps_A          232 VNFGSGQSLSVNDV  245 (321)
T ss_dssp             EEESCSCCEEHHHH
T ss_pred             EEecCCCcccHHHH
Confidence            9999875 555543

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.86  E-value=3e-21  Score=175.14  Aligned_cols=193  Identities=18%  Similarity=0.129  Sum_probs=126.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-Cccc---hhhh--cC---CCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRN---AMES--FG---TYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R-~~~~---~~~~--~~---~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      +|+||||||+||||++++++|+++|++|++++| +++.   ....  .+   .+++++.+|++|.+.+.++++++|+|||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   80 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH   80 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence            589999999999999999999999999999998 6532   1111  11   2478899999999999999999999999


Q ss_pred             cCCc-----------h----------HHhhhhhc-CCCEEEEecccccccCCC----Cchh-------c----cch--hH
Q 022625          170 PSEG-----------F----------ISNAGSLK-GVQHVILLSQLSVYRGSG----GIQA-------L----MKG--NA  210 (294)
Q Consensus       170 ~~~~-----------~----------~~~~~~~~-gv~r~V~vSs~~~~~~~~----~~~~-------~----~~~--~~  210 (294)
                      ++..           .          +.+++.+. +++|||++||..++....    ....       +    .+.  .+
T Consensus        81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y  160 (322)
T 2p4h_X           81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNY  160 (322)
T ss_dssp             CCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred             cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccH
Confidence            8311           1          33455666 789999999987432110    0000       0    000  01


Q ss_pred             HHHHHHHHHHH----HhCCCCEEEEEccceecCCCCCccee--e------ccC------CCCCCCcCHHHHHHHHHHHhh
Q 022625          211 RKLAEQDESML----MASGIPYTIIRTGVLQNTPGGKQGFQ--F------EEG------CAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       211 ~~~~~~ae~~l----~~~gl~~tivRPg~l~~~~~~~~~~~--~------~~g------~~~~~~Is~eDvA~~iv~aL~  272 (294)
                      ...|..+|.++    ...|++++++||+.++ ++.......  +      ..+      .....+++++|+|++++.+++
T Consensus       161 ~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~  239 (322)
T 2p4h_X          161 AVSKTLAEKAVLEFGEQNGIDVVTLILPFIV-GRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLE  239 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEEECEEE-SCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEcCCceE-CCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhh
Confidence            11233444443    3479999999999988 443211000  0      011      111258999999999999998


Q ss_pred             CCCCCCcEEEEecCCcccccc
Q 022625          273 SIPQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       273 ~~~~~g~~~~v~~g~~~~~ei  293 (294)
                      ++...|. |++++...+++|+
T Consensus       240 ~~~~~g~-~~~~~~~~s~~e~  259 (322)
T 2p4h_X          240 NSVPGGR-YNCSPFIVPIEEM  259 (322)
T ss_dssp             SCCCCEE-EECCCEEEEHHHH
T ss_pred             CcCCCCC-EEEcCCCCCHHHH
Confidence            7655554 8865555566554

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.86  E-value=2.4e-21  Score=175.60  Aligned_cols=188  Identities=16%  Similarity=0.094  Sum_probs=133.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEcCCc---
Q 022625          101 AVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG---  173 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~~---  173 (294)
                      +||||||+|+||++++++|+++  |++|++++|+..+..     +++++.+|++|.+++.++++  ++|+|||+++.   
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~   75 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSA   75 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCC
Confidence            5899999999999999999998  899999998765432     47789999999999999998  89999998321   


Q ss_pred             ------------------hHHhhhhhcCCCEEEEecccccccCCCC---chh---ccc-hhHHHHHHHHHHHH----HhC
Q 022625          174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGG---IQA---LMK-GNARKLAEQDESML----MAS  224 (294)
Q Consensus       174 ------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~---~~~---~~~-~~~~~~~~~ae~~l----~~~  224 (294)
                                        .+.+++++.++++||++||..++.....   ...   ..+ ..+...|..+|.++    ++.
T Consensus        76 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~  155 (317)
T 3ajr_A           76 KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKF  155 (317)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHhc
Confidence                              1445677789999999999988754211   000   001 11112233444443    346


Q ss_pred             CCCEEEEEccceecC---CCCC----------------cceeeccCCCCCCCcCHHHHHHHHHHHhhCCCC---CCcEEE
Q 022625          225 GIPYTIIRTGVLQNT---PGGK----------------QGFQFEEGCAANGSLSKEDAAFICVEALESIPQ---TGLIFE  282 (294)
Q Consensus       225 gl~~tivRPg~l~~~---~~~~----------------~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~---~g~~~~  282 (294)
                      +++++++||+.+++.   ++..                ....+..+....++++++|+|++++.+++++..   .+++|+
T Consensus       156 ~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~  235 (317)
T 3ajr_A          156 GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYN  235 (317)
T ss_dssp             CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEE
T ss_pred             CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccccccCceEe
Confidence            999999999887742   2111                111223445667889999999999999987643   358999


Q ss_pred             EecCCcccccc
Q 022625          283 VCEISNLCEQL  293 (294)
Q Consensus       283 v~~g~~~~~ei  293 (294)
                      ++++..++.|+
T Consensus       236 i~~~~~s~~e~  246 (317)
T 3ajr_A          236 VTAYTFTPSEL  246 (317)
T ss_dssp             CCSEEECHHHH
T ss_pred             cCCccccHHHH
Confidence            98765565554

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.86  E-value=1.5e-21  Score=176.91  Aligned_cols=185  Identities=12%  Similarity=0.075  Sum_probs=121.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcC--CcEEEEcCCc---
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG---  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~~~~~---  173 (294)
                      +|+|+||||+|+||++++++|+++|++|++++|+..+      .+  ++.+|++|.+.+.+++++  +|+|||+++.   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~   73 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRP   73 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHHCCSEEEECC-----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------CC--eEEecCCCHHHHHHHHHhhCCCEEEECCcccCh
Confidence            5899999999999999999999999999999987644      12  778999999999998885  8999998321   


Q ss_pred             -------------------hHHhhhhhcCCCEEEEecccccccCCCCc-h---hccc-hhHHHHHHHHHHHHHhCCCCEE
Q 022625          174 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-Q---ALMK-GNARKLAEQDESMLMASGIPYT  229 (294)
Q Consensus       174 -------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~-~---~~~~-~~~~~~~~~ae~~l~~~gl~~t  229 (294)
                                         .+.+++.+.++ |||++||..++...... .   +..+ ..+...|..+|.+++..+++++
T Consensus        74 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~  152 (315)
T 2ydy_A           74 DVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAA  152 (315)
T ss_dssp             --------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTCE
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCeE
Confidence                               14556677776 99999999887541110 0   0011 1122346678888888889999


Q ss_pred             EEEccceecCCCCC---------------cc-eeeccCCCCCCCcCHHHHHHHHHHHhhCC---CCCCcEEEEecCC-cc
Q 022625          230 IIRTGVLQNTPGGK---------------QG-FQFEEGCAANGSLSKEDAAFICVEALESI---PQTGLIFEVCEIS-NL  289 (294)
Q Consensus       230 ivRPg~l~~~~~~~---------------~~-~~~~~g~~~~~~Is~eDvA~~iv~aL~~~---~~~g~~~~v~~g~-~~  289 (294)
                      +|||+.++ ++...               .. .....+.....+++++|+|++++.++.++   ...+++|++++++ .+
T Consensus       153 ~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s  231 (315)
T 2ydy_A          153 VLRIPILY-GEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMT  231 (315)
T ss_dssp             EEEECSEE-CSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBC
T ss_pred             EEeeeeee-CCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCccc
Confidence            99999988 54322               00 01112445578899999999999998764   3568899999874 45


Q ss_pred             cccc
Q 022625          290 CEQL  293 (294)
Q Consensus       290 ~~ei  293 (294)
                      +.|+
T Consensus       232 ~~e~  235 (315)
T 2ydy_A          232 KYEM  235 (315)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.86  E-value=3.2e-21  Score=178.11  Aligned_cols=192  Identities=15%  Similarity=0.037  Sum_probs=132.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-----CCcEEEEc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-----GVRSIICP  170 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-----~~d~Vi~~  170 (294)
                      ..+|+|+||||+|+||++++++|+++| ++|+++.|+........-..+. +.+|++|.+.++++++     ++|+|||+
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~  122 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHE  122 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCce-EeeecCcHHHHHHHHhhcccCCCCEEEEC
Confidence            456899999999999999999999999 9999999987543111112344 7889999999999987     48999998


Q ss_pred             CCc--------------------hHHhhhhhcCCCEEEEecccccccCCCC--ch---hccch-hHHHHHHHHHHHHHh-
Q 022625          171 SEG--------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ---ALMKG-NARKLAEQDESMLMA-  223 (294)
Q Consensus       171 ~~~--------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~---~~~~~-~~~~~~~~ae~~l~~-  223 (294)
                      ++.                    .+.+++.+.++ +||++||..++.....  ..   +..+. .+...|..+|.+++. 
T Consensus       123 A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~  201 (357)
T 2x6t_A          123 GACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQI  201 (357)
T ss_dssp             CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHH
T ss_pred             CcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHH
Confidence            320                    14556777888 9999999988754321  00   00011 112234456666543 


Q ss_pred             ---CCCCEEEEEccceecCCCCC-------------------cc-eeeccCCC-CCCCcCHHHHHHHHHHHhhCCCCCCc
Q 022625          224 ---SGIPYTIIRTGVLQNTPGGK-------------------QG-FQFEEGCA-ANGSLSKEDAAFICVEALESIPQTGL  279 (294)
Q Consensus       224 ---~gl~~tivRPg~l~~~~~~~-------------------~~-~~~~~g~~-~~~~Is~eDvA~~iv~aL~~~~~~g~  279 (294)
                         .++++++|||+.++ +++..                   .. ..++.+.. ...+++++|+|++++.+++++.  ++
T Consensus       202 ~~~~g~~~~ilRp~~v~-Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~  278 (357)
T 2x6t_A          202 LPEANSQIVGFRYFNVY-GPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--SG  278 (357)
T ss_dssp             GGGCSSCEEEEEECEEE-SSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC--CE
T ss_pred             HHHcCCCEEEEecCeEE-CCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC--CC
Confidence               58999999999988 44321                   01 12233445 5688999999999999998765  88


Q ss_pred             EEEEecCC-cccccc
Q 022625          280 IFEVCEIS-NLCEQL  293 (294)
Q Consensus       280 ~~~v~~g~-~~~~ei  293 (294)
                      +|++++++ .+++|+
T Consensus       279 ~~~i~~~~~~s~~e~  293 (357)
T 2x6t_A          279 IFNLGTGRAESFQAV  293 (357)
T ss_dssp             EEEESCSCCEEHHHH
T ss_pred             eEEecCCCcccHHHH
Confidence            99998874 555554

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.86  E-value=1.2e-20  Score=175.40  Aligned_cols=191  Identities=11%  Similarity=0.001  Sum_probs=134.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-----hhhh-------cCCCcEEeecCCCCHHHHHHHhcC--Cc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES-------FGTYVESMAGDASNKKFLKTALRG--VR  165 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~-------~~~~v~~v~~D~~d~~~l~~~l~~--~d  165 (294)
                      |+|+||||+|+||++++++|+++|++|++++|+++.     ....       ...+++++.+|++|.+.+.+++++  +|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            789999999999999999999999999999998653     2221       124688999999999999999986  59


Q ss_pred             EEEEcCCc----------------------hHHhhhhhcCC---CEEEEecccccccCCCC--ch---hccc-hhHHHHH
Q 022625          166 SIICPSEG----------------------FISNAGSLKGV---QHVILLSQLSVYRGSGG--IQ---ALMK-GNARKLA  214 (294)
Q Consensus       166 ~Vi~~~~~----------------------~~~~~~~~~gv---~r~V~vSs~~~~~~~~~--~~---~~~~-~~~~~~~  214 (294)
                      +|||+++.                      .+.+++.+.++   ++||++||..++.....  ..   +..+ ..+...|
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK  184 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAK  184 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHH
Confidence            99998321                      14456677777   89999999988753211  00   0001 1111234


Q ss_pred             HHHHHHHH----hCCCCEEEEEccceecCCCCC--------------------cceeeccCCCCCCCcCHHHHHHHHHHH
Q 022625          215 EQDESMLM----ASGIPYTIIRTGVLQNTPGGK--------------------QGFQFEEGCAANGSLSKEDAAFICVEA  270 (294)
Q Consensus       215 ~~ae~~l~----~~gl~~tivRPg~l~~~~~~~--------------------~~~~~~~g~~~~~~Is~eDvA~~iv~a  270 (294)
                      ..+|.+++    +.+++++++||+.++ +|+..                    ....++.++...++++++|+|++++.+
T Consensus       185 ~~~e~~~~~~~~~~~~~~~i~r~~~~~-gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~  263 (375)
T 1t2a_A          185 LYAYWIVVNFREAYNLFAVNGILFNHE-SPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLM  263 (375)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECCEE-CTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeccccc-CCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHH
Confidence            44555544    358999999999877 43211                    012234456667899999999999999


Q ss_pred             hhCCCCCCcEEEEecCC-cccccc
Q 022625          271 LESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       271 L~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      ++++.  +++|++++++ .++.|+
T Consensus       264 ~~~~~--~~~~ni~~~~~~s~~e~  285 (375)
T 1t2a_A          264 LQNDE--PEDFVIATGEVHSVREF  285 (375)
T ss_dssp             HHSSS--CCCEEECCSCCEEHHHH
T ss_pred             HhcCC--CceEEEeCCCcccHHHH
Confidence            98754  4789998874 455553

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.86  E-value=1.8e-21  Score=178.20  Aligned_cols=194  Identities=13%  Similarity=0.133  Sum_probs=129.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch---hhh--cC---CCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA---MES--FG---TYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~---~~~--~~---~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      .+++||||||+||||++++++|+++|++|++++|+.+..   ...  ..   .+++++.+|++|.+.+.++++++|+|||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   83 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH   83 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            468999999999999999999999999999999987632   111  11   2478899999999999999999999999


Q ss_pred             cCC-------c----h----------HHhhhhhcC-CCEEEEecccccccC-CC--C-chh-------c-----cch-hH
Q 022625          170 PSE-------G----F----------ISNAGSLKG-VQHVILLSQLSVYRG-SG--G-IQA-------L-----MKG-NA  210 (294)
Q Consensus       170 ~~~-------~----~----------~~~~~~~~g-v~r~V~vSs~~~~~~-~~--~-~~~-------~-----~~~-~~  210 (294)
                      ++.       .    .          +.+++.+.+ ++||||+||..++.. ..  . ...       +     .+. .+
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  163 (337)
T 2c29_D           84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMY  163 (337)
T ss_dssp             CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred             eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchH
Confidence            721       0    0          334566666 899999999874321 10  0 000       0     000 11


Q ss_pred             HHHHHHHHHHH----HhCCCCEEEEEccceecCCCCCccee--e------ccCC-------CCCCCcCHHHHHHHHHHHh
Q 022625          211 RKLAEQDESML----MASGIPYTIIRTGVLQNTPGGKQGFQ--F------EEGC-------AANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       211 ~~~~~~ae~~l----~~~gl~~tivRPg~l~~~~~~~~~~~--~------~~g~-------~~~~~Is~eDvA~~iv~aL  271 (294)
                      ...|..+|.++    ++.|+++++|||+.++ ++.......  +      ..|.       ....+++++|+|++++.++
T Consensus       164 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~-Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~~  242 (337)
T 2c29_D          164 FVSKTLAEQAAWKYAKENNIDFITIIPTLVV-GPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLF  242 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEECEEE-SCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceE-CCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHHHh
Confidence            11233445443    3469999999999988 444211110  0      0111       1123899999999999999


Q ss_pred             hCCCCCCcEEEEecCCcccccc
Q 022625          272 ESIPQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       272 ~~~~~~g~~~~v~~g~~~~~ei  293 (294)
                      +++.. +..|+++++..+++|+
T Consensus       243 ~~~~~-~~~~~~~~~~~s~~e~  263 (337)
T 2c29_D          243 ENPKA-EGRYICSSHDCIILDL  263 (337)
T ss_dssp             HCTTC-CEEEEECCEEEEHHHH
T ss_pred             cCccc-CceEEEeCCCCCHHHH
Confidence            87544 4468777766666654

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.86  E-value=2.1e-21  Score=183.93  Aligned_cols=187  Identities=15%  Similarity=0.105  Sum_probs=135.0

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch------------------hhhcCCCcEEeecCCCCHHHH
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------------------MESFGTYVESMAGDASNKKFL  157 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~------------------~~~~~~~v~~v~~D~~d~~~l  157 (294)
                      ...+|+||||||+|+||++++++|+++|++|++++|++...                  ......+++++.+|++|.+.+
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            45678999999999999999999999999999999998721                  111235799999999998887


Q ss_pred             HHHhcCCcEEEEcCCc-------------------hHHhhhhhcCCCEEEEecccccccC-------------------C
Q 022625          158 KTALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRG-------------------S  199 (294)
Q Consensus       158 ~~~l~~~d~Vi~~~~~-------------------~~~~~~~~~gv~r~V~vSs~~~~~~-------------------~  199 (294)
                      . .+.++|+|||+++.                   .+.+++.+ ++++||++||..+ ..                   .
T Consensus       146 ~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~  222 (427)
T 4f6c_A          146 V-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQ  222 (427)
T ss_dssp             C-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSC
T ss_pred             C-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCccccccccccCC
Confidence            7 77899999998321                   14556666 7899999999887 21                   0


Q ss_pred             CCchhccchhHHHHHHHHHHHHHh---CCCCEEEEEccceecCCCCCcc--------------------eeec--cCCCC
Q 022625          200 GGIQALMKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQG--------------------FQFE--EGCAA  254 (294)
Q Consensus       200 ~~~~~~~~~~~~~~~~~ae~~l~~---~gl~~tivRPg~l~~~~~~~~~--------------------~~~~--~g~~~  254 (294)
                      .+...|     ...|..+|.++++   .|+++++||||.++ ++.....                    ..++  .++..
T Consensus       223 ~~~~~Y-----~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (427)
T 4f6c_A          223 LLTSPY-----TRSKFYSELKVLEAVNNGLDGRIVRVGNLT-SPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMP  296 (427)
T ss_dssp             CCCSHH-----HHHHHHHHHHHHHHHHTTCCEEEEEECCEE-SCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCE
T ss_pred             CCCCch-----HHHHHHHHHHHHHHHHcCCCEEEEeCCeee-cCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccce
Confidence            011222     2234566766665   79999999999988 3332110                    0111  24566


Q ss_pred             CCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-ccccc
Q 022625          255 NGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-NLCEQ  292 (294)
Q Consensus       255 ~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-~~~~e  292 (294)
                      .++++++|+|++++.++..+. .+++|++++++ .++.|
T Consensus       297 ~~~v~v~DvA~ai~~~~~~~~-~g~~~~l~~~~~~s~~e  334 (427)
T 4f6c_A          297 VDFSFVDTTARQIVALAQVNT-PQIIYHVLSPNKMPVKS  334 (427)
T ss_dssp             ECCEEHHHHHHHHHHHTTSCC-CCSEEEESCSCCEEHHH
T ss_pred             EEEeeHHHHHHHHHHHHcCCC-CCCEEEecCCCCCcHHH
Confidence            789999999999999998877 88999999875 44444

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.86  E-value=2.8e-21  Score=174.28  Aligned_cols=187  Identities=16%  Similarity=0.086  Sum_probs=130.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchh-hhcCCCcEEeecCCCCHHHHHHHhcC-----CcEEEEcCC-
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALRG-----VRSIICPSE-  172 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~-~~~~~~v~~v~~D~~d~~~l~~~l~~-----~d~Vi~~~~-  172 (294)
                      +|+||||+|+||++++++|+++| ++|+++.|++.... ... ..++ +.+|++|.+.+.+++++     +|+|||+++ 
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~   78 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL-VDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC   78 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH-HTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhc-Ccce-eccccccHHHHHHHHhccccCCCcEEEECccc
Confidence            58999999999999999999999 99999999875431 111 1234 78999999999999986     899999822 


Q ss_pred             ------c-------------hHHhhhhhcCCCEEEEecccccccCCCC--ch---hccch-hHHHHHHHHHHHHHh----
Q 022625          173 ------G-------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ---ALMKG-NARKLAEQDESMLMA----  223 (294)
Q Consensus       173 ------~-------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~---~~~~~-~~~~~~~~ae~~l~~----  223 (294)
                            .             .+.+++.+.++ |||++||..++.....  ..   +..+. .+...|..+|.+++.    
T Consensus        79 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~  157 (310)
T 1eq2_A           79 SSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE  157 (310)
T ss_dssp             CCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG
T ss_pred             ccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence                  0             14556777888 9999999988754321  00   00111 122234456666543    


Q ss_pred             CCCCEEEEEccceecCCCCC-------------------cc-eeeccCCC-CCCCcCHHHHHHHHHHHhhCCCCCCcEEE
Q 022625          224 SGIPYTIIRTGVLQNTPGGK-------------------QG-FQFEEGCA-ANGSLSKEDAAFICVEALESIPQTGLIFE  282 (294)
Q Consensus       224 ~gl~~tivRPg~l~~~~~~~-------------------~~-~~~~~g~~-~~~~Is~eDvA~~iv~aL~~~~~~g~~~~  282 (294)
                      .+++++++||+.++ ++...                   .. ..++.+.. ..++++++|+|++++.+++++.  +++|+
T Consensus       158 ~g~~~~~lrp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~  234 (310)
T 1eq2_A          158 ANSQIVGFRYFNVY-GPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--SGIFN  234 (310)
T ss_dssp             CSSCEEEEEECEEE-SSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--CEEEE
T ss_pred             cCCCEEEEeCCcEE-CcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC--CCeEE
Confidence            58999999999988 44321                   00 11334555 7789999999999999998765  88999


Q ss_pred             EecC-Ccccccc
Q 022625          283 VCEI-SNLCEQL  293 (294)
Q Consensus       283 v~~g-~~~~~ei  293 (294)
                      ++++ ..++.|+
T Consensus       235 i~~~~~~s~~e~  246 (310)
T 1eq2_A          235 LGTGRAESFQAV  246 (310)
T ss_dssp             ESCSCCBCHHHH
T ss_pred             EeCCCccCHHHH
Confidence            9886 4565554

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.86  E-value=6.6e-21  Score=173.95  Aligned_cols=196  Identities=9%  Similarity=-0.029  Sum_probs=135.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEe-ecCCCCHHHHHHHhcCCcEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESM-AGDASNKKFLKTALRGVRSI  167 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v-~~D~~d~~~l~~~l~~~d~V  167 (294)
                      ...+|+||||||+|+||++++++|+++|++|++++|+.++....       .+.+++++ .+|++|.+.+.++++++|+|
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   87 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence            45679999999999999999999999999999999987654321       12468888 89999999999999999999


Q ss_pred             EEcCCc-------------------hHHhhhh-hcCCCEEEEeccccccc-CCC-----Cchh-----------------
Q 022625          168 ICPSEG-------------------FISNAGS-LKGVQHVILLSQLSVYR-GSG-----GIQA-----------------  204 (294)
Q Consensus       168 i~~~~~-------------------~~~~~~~-~~gv~r~V~vSs~~~~~-~~~-----~~~~-----------------  204 (294)
                      ||+++.                   .+.+++. ..+++|||++||..++. +..     +...                 
T Consensus        88 ih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  167 (342)
T 1y1p_A           88 AHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPES  167 (342)
T ss_dssp             EECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTT
T ss_pred             EEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccccc
Confidence            998321                   1344555 36789999999988763 211     0000                 


Q ss_pred             --ccchh-HHHHHHHHHHHHHh------CCCCEEEEEccceecCCCCCc---c---------------ee-eccCCCCCC
Q 022625          205 --LMKGN-ARKLAEQDESMLMA------SGIPYTIIRTGVLQNTPGGKQ---G---------------FQ-FEEGCAANG  256 (294)
Q Consensus       205 --~~~~~-~~~~~~~ae~~l~~------~gl~~tivRPg~l~~~~~~~~---~---------------~~-~~~g~~~~~  256 (294)
                        ..+.. +...|..+|.+++.      .+++++++||+.++ ++....   .               .. ++.+ ....
T Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  245 (342)
T 1y1p_A          168 DPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTI-GTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PPQY  245 (342)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEE-CCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CSEE
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceE-CCCCCCCCCCccHHHHHHHHHcCCCccccccC-CcCC
Confidence              00111 11234455555543      27899999999988 433111   0               00 1111 4467


Q ss_pred             CcCHHHHHHHHHHHhhCCCCCCcEEEEecCCcccccc
Q 022625          257 SLSKEDAAFICVEALESIPQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       257 ~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~~~~ei  293 (294)
                      +++++|+|++++.++.++...++.|...++..++.|+
T Consensus       246 ~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~  282 (342)
T 1y1p_A          246 YVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTV  282 (342)
T ss_dssp             EEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHH
T ss_pred             EeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHH
Confidence            8999999999999998866667666555555666654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.86  E-value=2.9e-21  Score=173.27  Aligned_cols=183  Identities=15%  Similarity=0.095  Sum_probs=131.7

Q ss_pred             CCCCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEE
Q 022625           92 DEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIIC  169 (294)
Q Consensus        92 ~~~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~  169 (294)
                      ++....+.++||||||+|+||++++++|+++|++|++++|+               .+|++|.+.+.++++  ++|+|||
T Consensus         5 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~Dl~d~~~~~~~~~~~~~d~vih   69 (292)
T 1vl0_A            5 KIHHHHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------DLDITNVLAVNKFFNEKKPNVVIN   69 (292)
T ss_dssp             -------CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ccccccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------cCCCCCHHHHHHHHHhcCCCEEEE
Confidence            34455677999999999999999999999999999999986               379999999999998  7999999


Q ss_pred             cCCc----------------------hHHhhhhhcCCCEEEEecccccccCCCC--chh---ccc-hhHHHHHHHHHHHH
Q 022625          170 PSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQA---LMK-GNARKLAEQDESML  221 (294)
Q Consensus       170 ~~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~~---~~~-~~~~~~~~~ae~~l  221 (294)
                      +++.                      .+.+++.+.++ |||++||..++.....  ...   ..+ ..+...|..+|.++
T Consensus        70 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~  148 (292)
T 1vl0_A           70 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFV  148 (292)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence            8321                      14456777787 9999999987754321  100   001 11223466788888


Q ss_pred             HhCCCCEEEEEccceecCCCCCc-----------ceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-cc
Q 022625          222 MASGIPYTIIRTGVLQNTPGGKQ-----------GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-NL  289 (294)
Q Consensus       222 ~~~gl~~tivRPg~l~~~~~~~~-----------~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-~~  289 (294)
                      +..+.++++|||+.++ ++....           ......++...++++++|+|++++.+++++  .+++|++++++ .+
T Consensus       149 ~~~~~~~~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~~~~s  225 (292)
T 1vl0_A          149 KALNPKYYIVRTAWLY-GDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTCKGICS  225 (292)
T ss_dssp             HHHCSSEEEEEECSEE-SSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT--CCEEEECCCBSCEE
T ss_pred             HhhCCCeEEEeeeeee-CCCcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC--CCcEEEecCCCCcc
Confidence            8877899999999998 543211           011112445578899999999999999876  68999999874 45


Q ss_pred             cccc
Q 022625          290 CEQL  293 (294)
Q Consensus       290 ~~ei  293 (294)
                      +.|+
T Consensus       226 ~~e~  229 (292)
T 1vl0_A          226 WYDF  229 (292)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5543

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.86  E-value=1e-21  Score=179.77  Aligned_cols=192  Identities=13%  Similarity=0.118  Sum_probs=130.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchh------hh-cCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ES-FGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~------~~-~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      +|+||||||+||||++++++|+++|++|++++|+.++..      .. ...+++++.+|++|.+.+.++++++|+|||++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   88 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA   88 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence            689999999999999999999999999999999875421      11 12368899999999999999999999999972


Q ss_pred             Cc-----------h----------HHhhhhhcC-CCEEEEeccccccc---CCC-----------------C----chhc
Q 022625          172 EG-----------F----------ISNAGSLKG-VQHVILLSQLSVYR---GSG-----------------G----IQAL  205 (294)
Q Consensus       172 ~~-----------~----------~~~~~~~~g-v~r~V~vSs~~~~~---~~~-----------------~----~~~~  205 (294)
                      +.           .          +.+++.+.+ ++||||+||..++.   ...                 +    .+.|
T Consensus        89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y  168 (338)
T 2rh8_A           89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGY  168 (338)
T ss_dssp             SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCC
T ss_pred             CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchH
Confidence            10           1          344566665 99999999976311   000                 0    0123


Q ss_pred             cchhHHHHHHHHHHHHHhCCCCEEEEEccceecCCCCCccee--e------ccCC--------------CCCCCcCHHHH
Q 022625          206 MKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQ--F------EEGC--------------AANGSLSKEDA  263 (294)
Q Consensus       206 ~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~--~------~~g~--------------~~~~~Is~eDv  263 (294)
                      ..+|.. ....+..+.++.|+++++|||+.++ ++.......  +      ..|.              ...++++++|+
T Consensus       169 ~~sK~~-~E~~~~~~~~~~gi~~~~lrp~~v~-Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dv  246 (338)
T 2rh8_A          169 PASKTL-AEKAAWKFAEENNIDLITVIPTLMA-GSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDV  246 (338)
T ss_dssp             TTSCCH-HHHHHHHHHHHHTCCEEEEEECEEE-SCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHH
T ss_pred             HHHHHH-HHHHHHHHHHHcCCcEEEEeCCceE-CCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHH
Confidence            333321 1112223334469999999999988 544221100  0      0111              11268999999


Q ss_pred             HHHHHHHhhCCCCCCcEEEEecCCcccccc
Q 022625          264 AFICVEALESIPQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       264 A~~iv~aL~~~~~~g~~~~v~~g~~~~~ei  293 (294)
                      |++++.+++++.. +..|+++++..+++|+
T Consensus       247 a~a~~~~~~~~~~-~~~~~~~~~~~s~~e~  275 (338)
T 2rh8_A          247 CRAHIFVAEKESA-SGRYICCAANTSVPEL  275 (338)
T ss_dssp             HHHHHHHHHCTTC-CEEEEECSEEECHHHH
T ss_pred             HHHHHHHHcCCCc-CCcEEEecCCCCHHHH
Confidence            9999999987544 4578888776666664

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.86  E-value=4.9e-21  Score=172.73  Aligned_cols=178  Identities=15%  Similarity=0.102  Sum_probs=121.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc------
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~------  173 (294)
                      |+|||||||||||++|+++|+++||+|++++|++.+..             +...+...+.++++|+|||+.+.      
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~-------------~~~~~~~~~~l~~~d~vihla~~~i~~~~   67 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGR-------------ITWDELAASGLPSCDAAVNLAGENILNPL   67 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE-------------EEHHHHHHHCCCSCSEEEECCCCCSSCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe-------------eecchhhHhhccCCCEEEEeccCcccchh
Confidence            78999999999999999999999999999999875421             11223345678899999997320      


Q ss_pred             --------------------hHHhhhhhcCC--CEEEEecccccccCCCCc--h---hccchh-HHHHHH--HHHHHHHh
Q 022625          174 --------------------FISNAGSLKGV--QHVILLSQLSVYRGSGGI--Q---ALMKGN-ARKLAE--QDESMLMA  223 (294)
Q Consensus       174 --------------------~~~~~~~~~gv--~r~V~vSs~~~~~~~~~~--~---~~~~~~-~~~~~~--~ae~~l~~  223 (294)
                                          .+.+++...++  .+||+.||..+|.+....  .   +..+.. ....+.  +.+.....
T Consensus        68 ~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~~~~~~  147 (298)
T 4b4o_A           68 RRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPG  147 (298)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHHHCCSS
T ss_pred             hhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHHHHhhc
Confidence                                02334455554  468888998887643211  0   011111 111121  22223344


Q ss_pred             CCCCEEEEEccceecCCC------------CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-ccc
Q 022625          224 SGIPYTIIRTGVLQNTPG------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-NLC  290 (294)
Q Consensus       224 ~gl~~tivRPg~l~~~~~------------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-~~~  290 (294)
                      .+++++++||+.++ +++            .+....++.+.+..++||++|+|++++.+++++... .+||+++++ .+.
T Consensus       148 ~~~~~~~~r~~~v~-g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~-g~yn~~~~~~~t~  225 (298)
T 4b4o_A          148 DSTRQVVVRSGVVL-GRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVH-GVLNGVAPSSATN  225 (298)
T ss_dssp             SSSEEEEEEECEEE-CTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCC-EEEEESCSCCCBH
T ss_pred             cCCceeeeeeeeEE-cCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCC-CeEEEECCCccCH
Confidence            78999999999988 443            233345567788899999999999999999987654 599999885 454


Q ss_pred             cc
Q 022625          291 EQ  292 (294)
Q Consensus       291 ~e  292 (294)
                      +|
T Consensus       226 ~e  227 (298)
T 4b4o_A          226 AE  227 (298)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.85  E-value=9.6e-21  Score=174.68  Aligned_cols=190  Identities=12%  Similarity=0.081  Sum_probs=134.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-----CeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcC---CcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR-----TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG---VRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g-----~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~---~d~Vi~~  170 (294)
                      +|+|+||||+|+||++++++|+++|     ++|++++|++.... ....+++++.+|++|.+.+.+++++   +|+|||+
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~   79 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYV   79 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEEC
Confidence            4789999999999999999999999     99999999876543 2234789999999999999999998   9999998


Q ss_pred             CCc-----------------hHHhhhhhc--CCCEEE-------EecccccccCC----CCchhc---cc-hhHHHHHHH
Q 022625          171 SEG-----------------FISNAGSLK--GVQHVI-------LLSQLSVYRGS----GGIQAL---MK-GNARKLAEQ  216 (294)
Q Consensus       171 ~~~-----------------~~~~~~~~~--gv~r~V-------~vSs~~~~~~~----~~~~~~---~~-~~~~~~~~~  216 (294)
                      ++.                 .+.+++.+.  +++|||       |+||..++...    .+....   .+ ...+   ..
T Consensus        80 a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y---~~  156 (364)
T 2v6g_A           80 TWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY---YD  156 (364)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH---HH
T ss_pred             CCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhh---HH
Confidence            321                 145567776  799998       78998776432    111110   00 1111   12


Q ss_pred             HHHHHH----hCC-CCEEEEEccceecCCCCCc--c-------ee-e--------c-cC-----CCCCCCcCHHHHHHHH
Q 022625          217 DESMLM----ASG-IPYTIIRTGVLQNTPGGKQ--G-------FQ-F--------E-EG-----CAANGSLSKEDAAFIC  267 (294)
Q Consensus       217 ae~~l~----~~g-l~~tivRPg~l~~~~~~~~--~-------~~-~--------~-~g-----~~~~~~Is~eDvA~~i  267 (294)
                      +|.+++    ..+ ++++++||+.++ +++...  .       .. +        . .+     ......++++|+|+++
T Consensus       157 ~E~~~~~~~~~~~~~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~  235 (364)
T 2v6g_A          157 LEDIMLEEVEKKEGLTWSVHRPGNIF-GFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHH  235 (364)
T ss_dssp             HHHHHHHHHTTSTTCEEEEEEESSEE-CCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHH
T ss_pred             HHHHHHHHhhcCCCceEEEECCCcee-CCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHH
Confidence            444443    356 999999999998 443211  0       00 1        0 11     1224567789999999


Q ss_pred             HHHhhCCCCCCcEEEEecCC-cccccc
Q 022625          268 VEALESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       268 v~aL~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      +.+++++...+++||+++++ .++.|+
T Consensus       236 ~~~~~~~~~~g~~~ni~~~~~~s~~e~  262 (364)
T 2v6g_A          236 IWAAVDPYAKNEAFNVSNGDVFKWKHF  262 (364)
T ss_dssp             HHHHHCGGGTTEEEEECCSCCBCHHHH
T ss_pred             HHHHhCCCCCCceEEecCCCcCCHHHH
Confidence            99998876678999999985 566554

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.85  E-value=5e-21  Score=172.13  Aligned_cols=180  Identities=18%  Similarity=0.118  Sum_probs=132.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcC--CcEEEEcCC--c--
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSE--G--  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~~~~--~--  173 (294)
                      |+|+||||+|+||++++++|+ +|++|++++|++.           ++.+|++|.+.+.+++++  +|+|||+++  .  
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~   68 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD   68 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------cccccCCCHHHHHHHHHhcCCCEEEECcccCCHh
Confidence            589999999999999999999 8999999999862           467999999999999986  999999832  0  


Q ss_pred             ------------------hHHhhhhhcCCCEEEEecccccccCCCC--ch---hccc-hhHHHHHHHHHHHHHhCCCCEE
Q 022625          174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ---ALMK-GNARKLAEQDESMLMASGIPYT  229 (294)
Q Consensus       174 ------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~---~~~~-~~~~~~~~~ae~~l~~~gl~~t  229 (294)
                                        .+.+++++.++ ||||+||..++.....  ..   +..+ ..+...|..+|.+++....+++
T Consensus        69 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~  147 (299)
T 1n2s_A           69 KAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHL  147 (299)
T ss_dssp             HHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCSSEE
T ss_pred             hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCCCeE
Confidence                              14456777787 8999999988754321  10   0011 1122346678888888777999


Q ss_pred             EEEccceecCCCCCc------------ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--C-CCcEEEEecCC-cccccc
Q 022625          230 IIRTGVLQNTPGGKQ------------GFQFEEGCAANGSLSKEDAAFICVEALESIP--Q-TGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       230 ivRPg~l~~~~~~~~------------~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~-~g~~~~v~~g~-~~~~ei  293 (294)
                      ++||+.++ ++....            ......++...++++++|+|++++.+++++.  . .+++|++++++ .++.|+
T Consensus       148 ilRp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~  226 (299)
T 1n2s_A          148 IFRTSWVY-AGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDY  226 (299)
T ss_dssp             EEEECSEE-CSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHH
T ss_pred             EEeeeeec-CCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCCCHHHH
Confidence            99999998 443211            0111234566789999999999999998762  2 47899999874 555553

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.85  E-value=3.1e-20  Score=169.70  Aligned_cols=193  Identities=7%  Similarity=-0.106  Sum_probs=134.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh----hc--CCCcEEeecCCCCHHHHHHHhcC--CcEEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SF--GTYVESMAGDASNKKFLKTALRG--VRSIIC  169 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~--~~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~  169 (294)
                      .+|+|+||||+|+||++++++|+++|++|++++|++++...    ..  ..+++++.+|++|.+++.+++++  +|+|||
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            46899999999999999999999999999999998765321    11  13688999999999999999986  599999


Q ss_pred             cCCc----------------------hHHhhhhhcCC-CEEEEecccccccCCCC--c---hhccc-hhHHHHHHHHHHH
Q 022625          170 PSEG----------------------FISNAGSLKGV-QHVILLSQLSVYRGSGG--I---QALMK-GNARKLAEQDESM  220 (294)
Q Consensus       170 ~~~~----------------------~~~~~~~~~gv-~r~V~vSs~~~~~~~~~--~---~~~~~-~~~~~~~~~ae~~  220 (294)
                      +++.                      .+.+++.+.++ ++||++||..++.....  .   .+..+ ..+...|..+|.+
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~  161 (345)
T 2z1m_A           82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWI  161 (345)
T ss_dssp             CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHH
Confidence            8321                      03455666787 89999999987643211  0   00011 1111234445555


Q ss_pred             HH----hCCCCEEEEEccceecCCCCCc--------------------ceeeccCCCCCCCcCHHHHHHHHHHHhhCCCC
Q 022625          221 LM----ASGIPYTIIRTGVLQNTPGGKQ--------------------GFQFEEGCAANGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       221 l~----~~gl~~tivRPg~l~~~~~~~~--------------------~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      ++    +.+++++++|+..++ +|+...                    ...++.+....++++++|+|++++.+++++. 
T Consensus       162 ~~~~~~~~~~~~~~~r~~~~~-gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~-  239 (345)
T 2z1m_A          162 TVNYREAYNMFACSGILFNHE-SPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE-  239 (345)
T ss_dssp             HHHHHHHHCCCEEEEEECCEE-CTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS-
T ss_pred             HHHHHHHhCCceEeeeeeeec-CCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC-
Confidence            43    358999999988776 433110                    1123334555679999999999999998754 


Q ss_pred             CCcEEEEecCC-cccccc
Q 022625          277 TGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       277 ~g~~~~v~~g~-~~~~ei  293 (294)
                       +++|++++++ .++.|+
T Consensus       240 -~~~~~i~~~~~~s~~e~  256 (345)
T 2z1m_A          240 -PDDYVIATGETHTVREF  256 (345)
T ss_dssp             -CCCEEECCSCCEEHHHH
T ss_pred             -CceEEEeCCCCccHHHH
Confidence             4799998874 455543

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.85  E-value=9.7e-21  Score=173.52  Aligned_cols=193  Identities=11%  Similarity=0.031  Sum_probs=136.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCC-------CeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-CCcEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKR-------TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSI  167 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-~~d~V  167 (294)
                      .+.+|+|+||||+||||++++++|+++|       ++|++++|+..+.......+++++.+|++|.+.+.++++ ++|+|
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~v   90 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDVI   90 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSEE
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCEE
Confidence            3567899999999999999999999999       899999998755432233468899999999999999984 89999


Q ss_pred             EEcCCc---------------------hHHhhhhhcC-----CCEEEEecccccccCCC-----------CchhccchhH
Q 022625          168 ICPSEG---------------------FISNAGSLKG-----VQHVILLSQLSVYRGSG-----------GIQALMKGNA  210 (294)
Q Consensus       168 i~~~~~---------------------~~~~~~~~~g-----v~r~V~vSs~~~~~~~~-----------~~~~~~~~~~  210 (294)
                      ||+++.                     .+.+++.+.+     +++||++||..++....           +...|.    
T Consensus        91 ih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~----  166 (342)
T 2hrz_A           91 FHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYG----  166 (342)
T ss_dssp             EECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHH----
T ss_pred             EECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHH----
Confidence            998321                     0334555555     89999999998875431           112221    


Q ss_pred             HHHHHHHHHHHHh----CCCCEEEEEccceecCCCCCc------------------ceeec-cCCCCCCCcCHHHHHHHH
Q 022625          211 RKLAEQDESMLMA----SGIPYTIIRTGVLQNTPGGKQ------------------GFQFE-EGCAANGSLSKEDAAFIC  267 (294)
Q Consensus       211 ~~~~~~ae~~l~~----~gl~~tivRPg~l~~~~~~~~------------------~~~~~-~g~~~~~~Is~eDvA~~i  267 (294)
                       ..|..+|.++++    .+++++++|++.++..|+...                  ...++ .+.....+++++|+|+++
T Consensus       167 -~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~  245 (342)
T 2hrz_A          167 -TQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFL  245 (342)
T ss_dssp             -HHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHH
Confidence             224455555443    479999999998774344211                  01111 122334478999999999


Q ss_pred             HHHhhCCCC---CCcEEEEecCCcccccc
Q 022625          268 VEALESIPQ---TGLIFEVCEISNLCEQL  293 (294)
Q Consensus       268 v~aL~~~~~---~g~~~~v~~g~~~~~ei  293 (294)
                      +.+++.+..   .+++||+++...+++|+
T Consensus       246 ~~~~~~~~~~~~~~~~~ni~g~~~s~~e~  274 (342)
T 2hrz_A          246 IHGAMIDVEKVGPRRNLSMPGLSATVGEQ  274 (342)
T ss_dssp             HHHHHSCHHHHCSCCEEECCCEEEEHHHH
T ss_pred             HHHHhccccccCCccEEEcCCCCCCHHHH
Confidence            999987643   57899997655566554

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.85  E-value=3.1e-20  Score=171.90  Aligned_cols=192  Identities=11%  Similarity=-0.018  Sum_probs=132.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch-----hhhc------CCCcEEeecCCCCHHHHHHHhcC--Cc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MESF------GTYVESMAGDASNKKFLKTALRG--VR  165 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~-----~~~~------~~~v~~v~~D~~d~~~l~~~l~~--~d  165 (294)
                      ||+|+||||+|+||++++++|+++|++|++++|+.++.     ....      ..+++++.+|++|.+++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            58999999999999999999999999999999986531     1111      24688999999999999999986  69


Q ss_pred             EEEEcCCc----------------------hHHhhhhhcCC---CEEEEecccccccCCCC--ch---hccc-hhHHHHH
Q 022625          166 SIICPSEG----------------------FISNAGSLKGV---QHVILLSQLSVYRGSGG--IQ---ALMK-GNARKLA  214 (294)
Q Consensus       166 ~Vi~~~~~----------------------~~~~~~~~~gv---~r~V~vSs~~~~~~~~~--~~---~~~~-~~~~~~~  214 (294)
                      +|||+++.                      .+.+++.+.++   ++||++||..++.....  ..   +..+ ..+...|
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK  160 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK  160 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHH
Confidence            99998220                      04455677787   89999999887753211  00   0001 1111224


Q ss_pred             HHHHHHHH----hCCCCEEEEEccceecCCCCC--------------------cceeeccCCCCCCCcCHHHHHHHHHHH
Q 022625          215 EQDESMLM----ASGIPYTIIRTGVLQNTPGGK--------------------QGFQFEEGCAANGSLSKEDAAFICVEA  270 (294)
Q Consensus       215 ~~ae~~l~----~~gl~~tivRPg~l~~~~~~~--------------------~~~~~~~g~~~~~~Is~eDvA~~iv~a  270 (294)
                      ..+|.+++    +.+++++++|+..++ +|+..                    ....++.+....++++++|+|++++.+
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~r~~~~~-gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~  239 (372)
T 1db3_A          161 LYAYWITVNYRESYGMYACNGILFNHE-SPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMM  239 (372)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEE-CTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEECCcc-CCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHH
Confidence            44555543    358999999998877 33211                    112334556667899999999999999


Q ss_pred             hhCCCCCCcEEEEecCC-cccccc
Q 022625          271 LESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       271 L~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      ++++.  +++||+++++ .++.|+
T Consensus       240 ~~~~~--~~~~ni~~~~~~s~~e~  261 (372)
T 1db3_A          240 LQQEQ--PEDFVIATGVQYSVRQF  261 (372)
T ss_dssp             TSSSS--CCCEEECCCCCEEHHHH
T ss_pred             HhcCC--CceEEEcCCCceeHHHH
Confidence            87654  4799999875 555553

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.84  E-value=3.9e-20  Score=169.86  Aligned_cols=190  Identities=13%  Similarity=0.077  Sum_probs=129.1

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch----hhhc-CCCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESF-GTYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~----~~~~-~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      ..+.+|+||||||+|+||++++++|+++|++|++++|+....    .... ..+++++.+|+.+.     .+.++|+|||
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~d~vih   97 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LYIEVDQIYH   97 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CCCCCSEEEE
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-----hhcCCCEEEE
Confidence            345679999999999999999999999999999999975421    1111 24689999999874     3678999999


Q ss_pred             cCCc----------------------hHHhhhhhcCCCEEEEecccccccCCC--Cc--------hhccchh-HHHHHHH
Q 022625          170 PSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSG--GI--------QALMKGN-ARKLAEQ  216 (294)
Q Consensus       170 ~~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~--~~--------~~~~~~~-~~~~~~~  216 (294)
                      +++.                      .+.+++.+.++ +||++||..++....  +.        .+..+.. +...|..
T Consensus        98 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  176 (343)
T 2b69_A           98 LASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRV  176 (343)
T ss_dssp             CCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHH
T ss_pred             CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHH
Confidence            8321                      13456677776 999999988774321  00        0111111 1123445


Q ss_pred             HHHHHH----hCCCCEEEEEccceecCCCCC-----------------cc-eeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          217 DESMLM----ASGIPYTIIRTGVLQNTPGGK-----------------QG-FQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       217 ae~~l~----~~gl~~tivRPg~l~~~~~~~-----------------~~-~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      +|.+++    +.+++++++||+.++ ++...                 .. ..++.+....++++++|+|++++.++..+
T Consensus       177 ~E~~~~~~~~~~~~~~~ilrp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~  255 (343)
T 2b69_A          177 AETMCYAYMKQEGVEVRVARIFNTF-GPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN  255 (343)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECCEE-CTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHhCCcEEEEEEccee-CcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC
Confidence            555543    469999999999988 44311                 11 12344556678999999999999998764


Q ss_pred             CCCCcEEEEecCC-cccccc
Q 022625          275 PQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       275 ~~~g~~~~v~~g~-~~~~ei  293 (294)
                        .+++|++++++ .++.|+
T Consensus       256 --~~~~~~i~~~~~~s~~e~  273 (343)
T 2b69_A          256 --VSSPVNLGNPEEHTILEF  273 (343)
T ss_dssp             --CCSCEEESCCCEEEHHHH
T ss_pred             --CCCeEEecCCCCCcHHHH
Confidence              36799999875 455543

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.84  E-value=3.6e-20  Score=169.44  Aligned_cols=193  Identities=18%  Similarity=0.137  Sum_probs=129.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc----hhh---hcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AME---SFGTYVESMAGDASNKKFLKTALR--GVRSIICP  170 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~----~~~---~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~  170 (294)
                      |+|+||||+|+||++++++|+++|++|+++.|....    ...   ..+..++++.+|++|.+.+.++++  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            589999999999999999999999999999875322    111   113468899999999999999887  48999998


Q ss_pred             CCc----------------------hHHhhhhhcCCCEEEEecccccccCCCC--c---hhc-c-chhHHHHHHHHHHHH
Q 022625          171 SEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QAL-M-KGNARKLAEQDESML  221 (294)
Q Consensus       171 ~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~---~~~-~-~~~~~~~~~~ae~~l  221 (294)
                      ++.                      .+.+++++.++++||++||..++.....  .   .+. . ...+...|..+|.++
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~  160 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence            321                      0344567788999999999887642210  0   000 0 011122344555554


Q ss_pred             Hh----C-CCCEEEEEccceecCCC---------CC-----------------ccee-e------ccCCCCCCCcCHHHH
Q 022625          222 MA----S-GIPYTIIRTGVLQNTPG---------GK-----------------QGFQ-F------EEGCAANGSLSKEDA  263 (294)
Q Consensus       222 ~~----~-gl~~tivRPg~l~~~~~---------~~-----------------~~~~-~------~~g~~~~~~Is~eDv  263 (294)
                      +.    . +++++++||+.++ ++.         ..                 ..+. +      +.|....++||++|+
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~-G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dv  239 (338)
T 1udb_A          161 TDLQKAQPDWSIALLRYFNPV-GAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL  239 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEE-CCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHH
T ss_pred             HHHHHhcCCCceEEEeeceec-CCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHH
Confidence            33    3 7999999998776 221         00                 0000 1      123344578999999


Q ss_pred             HHHHHHHhhCCC-CC-CcEEEEecCC-cccccc
Q 022625          264 AFICVEALESIP-QT-GLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       264 A~~iv~aL~~~~-~~-g~~~~v~~g~-~~~~ei  293 (294)
                      |++++.+++.+. .. +++||+++++ .+++|+
T Consensus       240 a~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~  272 (338)
T 1udb_A          240 ADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDV  272 (338)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHH
T ss_pred             HHHHHHHHhhhhccCCCcEEEecCCCceeHHHH
Confidence            999999997532 23 4899998874 455554

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.84  E-value=3.1e-20  Score=185.55  Aligned_cols=196  Identities=13%  Similarity=0.072  Sum_probs=140.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCccchhhhc-CCCcEEeecCCCCHHH-HHHHhcCCcEEEEcCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDASNKKF-LKTALRGVRSIICPSE  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~-l~~~l~~~d~Vi~~~~  172 (294)
                      ...+|+|+||||+|+||++++++|+++ |++|++++|+..+..... ..+++++.+|++|.++ +.++++++|+|||+++
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa  391 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA  391 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCC
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECce
Confidence            346789999999999999999999998 899999999887654432 2478999999998654 7788899999999722


Q ss_pred             --c--------------------hHHhhhhhcCCCEEEEecccccccCCCC--chhc----------cch-hHHHHHHHH
Q 022625          173 --G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQAL----------MKG-NARKLAEQD  217 (294)
Q Consensus       173 --~--------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~~~----------~~~-~~~~~~~~a  217 (294)
                        .                    .+.+++.+.+ +||||+||.+++.....  ....          .+. .+...|..+
T Consensus       392 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~  470 (660)
T 1z7e_A          392 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLL  470 (660)
T ss_dssp             CCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHH
T ss_pred             ecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHH
Confidence              0                    1445667778 99999999988753211  0000          001 122234556


Q ss_pred             HHHHH----hCCCCEEEEEccceecCCCCC-----------------------cc-eeeccCCCCCCCcCHHHHHHHHHH
Q 022625          218 ESMLM----ASGIPYTIIRTGVLQNTPGGK-----------------------QG-FQFEEGCAANGSLSKEDAAFICVE  269 (294)
Q Consensus       218 e~~l~----~~gl~~tivRPg~l~~~~~~~-----------------------~~-~~~~~g~~~~~~Is~eDvA~~iv~  269 (294)
                      |.+++    +.+++++++||+.++ ++...                       .. ..++.+....++++++|+|++++.
T Consensus       471 E~~~~~~~~~~gi~~~ilRpg~v~-Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~  549 (660)
T 1z7e_A          471 DRVIWAYGEKEGLQFTLFRPFNWM-GPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYR  549 (660)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECSEE-STTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEECCCccc-CCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHH
Confidence            66653    369999999999988 44321                       01 112344566789999999999999


Q ss_pred             HhhCCC--CCCcEEEEecCC--cccccc
Q 022625          270 ALESIP--QTGLIFEVCEIS--NLCEQL  293 (294)
Q Consensus       270 aL~~~~--~~g~~~~v~~g~--~~~~ei  293 (294)
                      +++++.  ..+++|++++++  .++.|+
T Consensus       550 ~l~~~~~~~~g~~~ni~~~~~~~s~~el  577 (660)
T 1z7e_A          550 IIENAGNRCDGEIINIGNPENEASIEEL  577 (660)
T ss_dssp             HHHCGGGTTTTEEEEECCGGGEEEHHHH
T ss_pred             HHhCccccCCCeEEEECCCCCCcCHHHH
Confidence            998764  468999999874  565554

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.84  E-value=3.9e-21  Score=186.34  Aligned_cols=192  Identities=16%  Similarity=0.126  Sum_probs=136.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch------------------hhhcCCCcEEeecCCCCHHHHH
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------------------MESFGTYVESMAGDASNKKFLK  158 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~------------------~~~~~~~v~~v~~D~~d~~~l~  158 (294)
                      ..+|+||||||||+||++++++|+++|++|++++|+..+.                  ......+++++.+|++|.+.+.
T Consensus       148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred             CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence            3468999999999999999999999999999999988731                  1123468999999999977777


Q ss_pred             HHhcCCcEEEEcCCc-------------------hHHhhhhhcCCCEEEEeccccc--ccCC----CCch-------hcc
Q 022625          159 TALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSV--YRGS----GGIQ-------ALM  206 (294)
Q Consensus       159 ~~l~~~d~Vi~~~~~-------------------~~~~~~~~~gv~r~V~vSs~~~--~~~~----~~~~-------~~~  206 (294)
                       .+.++|+|||++..                   .+.+++.+ ++++|||+||.++  +...    .+..       ...
T Consensus       228 -~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~  305 (508)
T 4f6l_B          228 -LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLL  305 (508)
T ss_dssp             -CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCC
T ss_pred             -CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCccCCcCcccccccccccccC
Confidence             77899999998321                   14455666 7799999999887  1000    0000       000


Q ss_pred             chhHHHHHHHHHHHHHh---CCCCEEEEEccceecCCCCCcc--------------------eeec--cCCCCCCCcCHH
Q 022625          207 KGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQG--------------------FQFE--EGCAANGSLSKE  261 (294)
Q Consensus       207 ~~~~~~~~~~ae~~l~~---~gl~~tivRPg~l~~~~~~~~~--------------------~~~~--~g~~~~~~Is~e  261 (294)
                      ...+...|..+|.++++   .|++++++||+.+++ +.....                    ..++  .++...++++++
T Consensus       306 ~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~  384 (508)
T 4f6l_B          306 TSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTS-PYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVD  384 (508)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEES-CSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHcCCCEEEEecceecc-CCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHH
Confidence            11122234456666655   799999999999883 321110                    1111  235667899999


Q ss_pred             HHHHHHHHHhhCCCCCCcEEEEecCC-ccccc
Q 022625          262 DAAFICVEALESIPQTGLIFEVCEIS-NLCEQ  292 (294)
Q Consensus       262 DvA~~iv~aL~~~~~~g~~~~v~~g~-~~~~e  292 (294)
                      |+|++++.++.++. .+++||+++++ .++.|
T Consensus       385 DvA~ai~~~~~~~~-~~~~~nl~~~~~~s~~e  415 (508)
T 4f6l_B          385 TTARQIVALAQVNT-PQIIYHVLSPNKMPVKS  415 (508)
T ss_dssp             HHHHHHHHHTTBCC-SCSEEEESCSCEEEHHH
T ss_pred             HHHHHHHHHHhCCC-CCCEEEeCCCCCCCHHH
Confidence            99999999998877 78999999975 44444

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.84  E-value=4.1e-20  Score=172.07  Aligned_cols=186  Identities=9%  Similarity=-0.024  Sum_probs=133.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-----hhhhc------CC-CcEEeecCCCCHHHHHHHhcC--Cc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF------GT-YVESMAGDASNKKFLKTALRG--VR  165 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~------~~-~v~~v~~D~~d~~~l~~~l~~--~d  165 (294)
                      |+||||||+||||++++++|+++|++|++++|+.++     +....      .. +++++.+|++|.+++.+++++  +|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            799999999999999999999999999999998754     22211      12 688999999999999999986  59


Q ss_pred             EEEEcCCc----------------------hHHhhhhhcCCC-----EEEEecccccccCCC----------Cchhccch
Q 022625          166 SIICPSEG----------------------FISNAGSLKGVQ-----HVILLSQLSVYRGSG----------GIQALMKG  208 (294)
Q Consensus       166 ~Vi~~~~~----------------------~~~~~~~~~gv~-----r~V~vSs~~~~~~~~----------~~~~~~~~  208 (294)
                      +|||+++.                      .+.+++.+.+++     +||++||..++....          +...|   
T Consensus       109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y---  185 (381)
T 1n7h_A          109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPY---  185 (381)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHH---
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCch---
Confidence            99998321                      034456666665     999999998875321          11222   


Q ss_pred             hHHHHHHHHHHHHHh----CCCCEEEEEccceecCCCCCc--------------------ceeeccCCCCCCCcCHHHHH
Q 022625          209 NARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPGGKQ--------------------GFQFEEGCAANGSLSKEDAA  264 (294)
Q Consensus       209 ~~~~~~~~ae~~l~~----~gl~~tivRPg~l~~~~~~~~--------------------~~~~~~g~~~~~~Is~eDvA  264 (294)
                        ...|..+|.+++.    .+++++++|+..++ +|+...                    ...++.+.....+++++|+|
T Consensus       186 --~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~-gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva  262 (381)
T 1n7h_A          186 --AASKCAAHWYTVNYREAYGLFACNGILFNHE-SPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYV  262 (381)
T ss_dssp             --HHHHHHHHHHHHHHHHHHCCEEEEEEECCEE-CTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHH
T ss_pred             --HHHHHHHHHHHHHHHHHhCCcEEEEEeCcee-CCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHH
Confidence              1224455555443    58999999998877 443110                    11233445667899999999


Q ss_pred             HHHHHHhhCCCCCCcEEEEecCC-cccccc
Q 022625          265 FICVEALESIPQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       265 ~~iv~aL~~~~~~g~~~~v~~g~-~~~~ei  293 (294)
                      ++++.+++++.  +++|++++++ .++.|+
T Consensus       263 ~a~~~~~~~~~--~~~~~i~~~~~~s~~e~  290 (381)
T 1n7h_A          263 EAMWLMLQQEK--PDDYVVATEEGHTVEEF  290 (381)
T ss_dssp             HHHHHHHTSSS--CCEEEECCSCEEEHHHH
T ss_pred             HHHHHHHhCCC--CCeEEeeCCCCCcHHHH
Confidence            99999998754  4899999874 455543

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.83  E-value=2.7e-20  Score=172.90  Aligned_cols=165  Identities=14%  Similarity=0.078  Sum_probs=125.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc-----
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-----  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-----  173 (294)
                      |+|+||||+|+||++++++|+++|+ +|+.++|+                   .|.+.+.++++++|+|||+++.     
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------~d~~~l~~~~~~~d~Vih~a~~~~~~~   61 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------TKEEELESALLKADFIVHLAGVNRPEH   61 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------CCHHHHHHHHHHCSEEEECCCSBCTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------CCHHHHHHHhccCCEEEECCcCCCCCC
Confidence            6899999999999999999999998 66655443                   7899999999999999998220     


Q ss_pred             -------------hHHhhhhhcCCC-EEEEecccccccCCCCchhccchhHHHHHHHHHHHHHh----CCCCEEEEEccc
Q 022625          174 -------------FISNAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA----SGIPYTIIRTGV  235 (294)
Q Consensus       174 -------------~~~~~~~~~gv~-r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~----~gl~~tivRPg~  235 (294)
                                   .+.+++++.+++ |||++||..++.    ...|..     .|..+|.++++    .+++++++||+.
T Consensus        62 ~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~----~~~Y~~-----sK~~~E~~~~~~~~~~g~~~~i~R~~~  132 (369)
T 3st7_A           62 DKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ----DNPYGE-----SKLQGEQLLREYAEEYGNTVYIYRWPN  132 (369)
T ss_dssp             STTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS----CSHHHH-----HHHHHHHHHHHHHHHHCCCEEEEEECE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC----CCCchH-----HHHHHHHHHHHHHHHhCCCEEEEECCc
Confidence                         166778888988 999999998876    223322     24456666654    799999999999


Q ss_pred             eecCCCC-----------------CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCC-CcEEEEecC-Ccccccc
Q 022625          236 LQNTPGG-----------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQT-GLIFEVCEI-SNLCEQL  293 (294)
Q Consensus       236 l~~~~~~-----------------~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~-g~~~~v~~g-~~~~~ei  293 (294)
                      ++ ++..                 +....+..++...++++++|+|++++.++.++... +++|++.++ ..++.|+
T Consensus       133 v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~  208 (369)
T 3st7_A          133 LF-GKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEI  208 (369)
T ss_dssp             EE-CTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHHHH
T ss_pred             ee-CCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCceeHHHH
Confidence            88 3321                 11122334556678999999999999999987765 899999887 4454443

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.83  E-value=3.7e-19  Score=157.78  Aligned_cols=191  Identities=14%  Similarity=0.138  Sum_probs=134.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--------CCCcEEeecCCCCHHHHHHHhc------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      +.+|+++||||+|+||++++++|+++|++|++++|++++..+..        +..++++.+|++|.++++++++      
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            46799999999999999999999999999999999986543321        2268899999999999988886      


Q ss_pred             CCcEEEEcCC----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          163 GVRSIICPSE----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       163 ~~d~Vi~~~~----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      ++|++||+++    + +                         +...+++.+.++||++||..++.+......|..+|.. 
T Consensus        85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  164 (260)
T 2z1n_A           85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPV  164 (260)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHHH
Confidence            6899999832    0 0                         1223445678999999999887766555566554432 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCC----------Ccc-----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGG----------KQG-----FQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~----------~~~-----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                       .+.+.....+...|+++++|+||++......          ...     ..+........+.+++|+|+++++++..+.
T Consensus       165 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~  244 (260)
T 2z1n_A          165 IGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEKA  244 (260)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccc
Confidence             1223333344557999999999987632211          000     001111122346799999999999987643


Q ss_pred             --CCCcEEEEecCC
Q 022625          276 --QTGLIFEVCEIS  287 (294)
Q Consensus       276 --~~g~~~~v~~g~  287 (294)
                        ..|+.+++.+|-
T Consensus       245 ~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          245 SFITGAVIPVDGGA  258 (260)
T ss_dssp             TTCCSCEEEESTTT
T ss_pred             cCCCCCEEEeCCCc
Confidence              578999998773

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.83  E-value=2.7e-19  Score=156.97  Aligned_cols=191  Identities=12%  Similarity=0.116  Sum_probs=133.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      +|+++||||+|+||++++++|+++|++|++++|+.++..+.       .+..++++.+|++|.++++++++       ++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999987654321       12468899999999999888876       78


Q ss_pred             cEEEEcCC-----c---h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          165 RSIICPSE-----G---F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       165 d~Vi~~~~-----~---~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      |+|||+++     .   +                         +...+++.+.++||++||..++.+..+...|..+|..
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  161 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGA  161 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHHH
Confidence            99999832     1   1                         1112345578999999999887665555556444431


Q ss_pred             H--HHHHHHHHHHhCCCCEEEEEccceecCCCCC-cc---e--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG---F--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       212 ~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-~~---~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                      .  +.+.....+...|+++++||||.+....... ..   .  .+........+.+++|+|+++++++..+.  ..|+.+
T Consensus       162 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  241 (250)
T 2cfc_A          162 VLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAAL  241 (250)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCSCEE
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccCCEE
Confidence            1  1222223334469999999999987332111 00   0  01112223456799999999999998754  458999


Q ss_pred             EEecCCcc
Q 022625          282 EVCEISNL  289 (294)
Q Consensus       282 ~v~~g~~~  289 (294)
                      ++.+|...
T Consensus       242 ~v~gG~~~  249 (250)
T 2cfc_A          242 VMDGAYTA  249 (250)
T ss_dssp             EESTTGGG
T ss_pred             EECCceec
Confidence            99887543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.83  E-value=2.3e-19  Score=159.44  Aligned_cols=190  Identities=14%  Similarity=0.117  Sum_probs=133.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      +.+|+++||||+|+||++++++|+++|++|++++|++++..+.   ....+.++.+|++|.++++++++       ++|+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4679999999999999999999999999999999998765432   22347889999999999988877       7899


Q ss_pred             EEEcCC----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HH
Q 022625          167 IICPSE----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA  214 (294)
Q Consensus       167 Vi~~~~----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~  214 (294)
                      +||+++    + +                         +...+++.+.++||++||..++.+..+...|..+|...  +.
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  164 (260)
T 1nff_A           85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLT  164 (260)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHH
Confidence            999832    0 0                         12234556788999999998876655555564444311  22


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      +.....+...|+++++||||.+...........+. ......+.+++|+|+++++++..+.  ..|+.|++.+|.
T Consensus       165 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~  238 (260)
T 1nff_A          165 KSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIF-QTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGT  238 (260)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCS-CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCccCcEEEEEEeCCCCCCccccchhhHH-hCccCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence            22223344579999999999977321110000000 1122346789999999999987643  458999998874

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.83  E-value=1.6e-19  Score=158.83  Aligned_cols=193  Identities=12%  Similarity=0.097  Sum_probs=135.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+.+|+|+||||+|+||++++++|+++|++|+++.|++++....      .+..+.++.+|++|.++++++++       
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   87 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            45689999999999999999999999999999999997654322      13468889999999999988876       


Q ss_pred             CCcEEEEcCCc-----h--------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHHH-
Q 022625          163 GVRSIICPSEG-----F--------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK-  212 (294)
Q Consensus       163 ~~d~Vi~~~~~-----~--------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~-  212 (294)
                      ++|+|||+++.     +                    +.+    .+++.+.++||++||..++.+..+...|..+|... 
T Consensus        88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  167 (255)
T 1fmc_A           88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAAS  167 (255)
T ss_dssp             SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHH
Confidence            78999998320     0                    111    22456789999999998877665555664444321 


Q ss_pred             -HHHHHHHHHHhCCCCEEEEEccceecCCC-CC--cc--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          213 -LAEQDESMLMASGIPYTIIRTGVLQNTPG-GK--QG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       213 -~~~~ae~~l~~~gl~~tivRPg~l~~~~~-~~--~~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                       +.+.....+...++++++||||.+..... ..  ..  ..+..+.....+.+++|+|+++++++..+.  ..|++|++.
T Consensus       168 ~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  247 (255)
T 1fmc_A          168 HLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVS  247 (255)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCccccCCCcEEEEC
Confidence             11222223344689999999999873210 00  00  011122333457899999999999987643  368999998


Q ss_pred             cCCc
Q 022625          285 EISN  288 (294)
Q Consensus       285 ~g~~  288 (294)
                      +|..
T Consensus       248 gg~~  251 (255)
T 1fmc_A          248 GGGV  251 (255)
T ss_dssp             TTSC
T ss_pred             Ccee
Confidence            8753

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.83  E-value=1.4e-19  Score=160.56  Aligned_cols=190  Identities=13%  Similarity=0.108  Sum_probs=134.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-------CCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+++++.+..       +..+.++.+|++|.++++++++       
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            56799999999999999999999999999999999986543321       4568889999999998888776       


Q ss_pred             CCcEEEEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          163 GVRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       163 ~~d~Vi~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      ++|++||+++.             +                 +...+++.+.++||++||..++.+......|..+|.. 
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  164 (263)
T 3ai3_A           85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAAL  164 (263)
T ss_dssp             SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHHHH
Confidence            78999998320             0                 1112345678899999999887765555566544432 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc--------------c--eeeccC-CCCCCCcCHHHHHHHHHHHhhC
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--------------G--FQFEEG-CAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~--------------~--~~~~~g-~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                       .+.+.....+...|+++++||||.+.. +....              .  ..+... .....+.+++|+|+++++++..
T Consensus       165 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~  243 (263)
T 3ai3_A          165 MMFSKTLATEVIKDNIRVNCINPGLILT-PDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSE  243 (263)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCC-HHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHTST
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCcccC-cchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCc
Confidence             122222333445799999999998762 21000              0  000011 2234578999999999999876


Q ss_pred             CC--CCCcEEEEecCC
Q 022625          274 IP--QTGLIFEVCEIS  287 (294)
Q Consensus       274 ~~--~~g~~~~v~~g~  287 (294)
                      +.  ..|++|++.+|.
T Consensus       244 ~~~~~~G~~~~vdgG~  259 (263)
T 3ai3_A          244 RATYSVGSAYFVDGGM  259 (263)
T ss_dssp             TCTTCCSCEEEESTTC
T ss_pred             cccCCCCcEEEECCCc
Confidence            54  468999998874

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.83  E-value=5.3e-19  Score=158.28  Aligned_cols=190  Identities=16%  Similarity=0.161  Sum_probs=133.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      ..+|+++||||+|+||++++++|+++|++|+++.|+.++..+.   .+..++++.+|++|.++++++++       ++|+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            3579999999999999999999999999999999998775543   34578999999999999888776       7799


Q ss_pred             EEEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HH
Q 022625          167 IICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA  214 (294)
Q Consensus       167 Vi~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~  214 (294)
                      |||+++.             +                 +...+++.+.++||++||..+..+..+...|..+|...  +.
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  162 (281)
T 3m1a_A           83 LVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLS  162 (281)
T ss_dssp             EEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHHH
Confidence            9998321             0                 12234566789999999998877766666665554321  11


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCCCCCcce-----------------eeccCCCCCCCcCHHHHHHHHHHHhhCCCCC
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGF-----------------QFEEGCAANGSLSKEDAAFICVEALESIPQT  277 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~-----------------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~  277 (294)
                      +.....+...|+++++||||.+..........                 .+........+.+++|+|++++.+++++. .
T Consensus       163 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~-~  241 (281)
T 3m1a_A          163 EGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTEK-T  241 (281)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSSS-C
T ss_pred             HHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCCC-C
Confidence            22222234479999999999876322111000                 01112233557899999999999998865 4


Q ss_pred             CcEEEEecCC
Q 022625          278 GLIFEVCEIS  287 (294)
Q Consensus       278 g~~~~v~~g~  287 (294)
                      +..|++.++.
T Consensus       242 ~~~~~l~s~~  251 (281)
T 3m1a_A          242 PLRLALGGDA  251 (281)
T ss_dssp             CSEEEESHHH
T ss_pred             CeEEecCchH
Confidence            6788887764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.82  E-value=4.6e-19  Score=157.90  Aligned_cols=197  Identities=9%  Similarity=0.049  Sum_probs=134.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cC--CCcEEeecCCCCHHHHHHHhc-------C
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~--~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      .+.+|+|+||||+|+||++++++|+++|++|+++.|+.++....   .+  ..+.++.+|++|.++++++++       +
T Consensus        13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   92 (278)
T 2bgk_A           13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   92 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45689999999999999999999999999999999987654322   22  268899999999999888876       7


Q ss_pred             CcEEEEcCC------c-h---------------------HH----hhhhhcCCCEEEEecccccccCCC-CchhccchhH
Q 022625          164 VRSIICPSE------G-F---------------------IS----NAGSLKGVQHVILLSQLSVYRGSG-GIQALMKGNA  210 (294)
Q Consensus       164 ~d~Vi~~~~------~-~---------------------~~----~~~~~~gv~r~V~vSs~~~~~~~~-~~~~~~~~~~  210 (294)
                      +|+|||+.+      . +                     +.    ..+.+.+.++||++||..++.+.. ....|..+|.
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~  172 (278)
T 2bgk_A           93 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKH  172 (278)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHH
T ss_pred             CCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHHHH
Confidence            899999822      0 0                     11    123345778999999998876544 4445544433


Q ss_pred             HH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCc-c--ee------eccCCCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G--FQ------FEEGCAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       211 ~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~--~~------~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                      ..  +.+.....+...|+++++||||.+........ .  ..      .........+++++|+|+++++++..+.  ..
T Consensus       173 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  252 (278)
T 2bgk_A          173 AVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVS  252 (278)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCcccccCC
Confidence            11  11222222344799999999999873321111 0  00      0011223457899999999999997543  46


Q ss_pred             CcEEEEecCC-ccccc
Q 022625          278 GLIFEVCEIS-NLCEQ  292 (294)
Q Consensus       278 g~~~~v~~g~-~~~~e  292 (294)
                      |++|++.+|. .+.+|
T Consensus       253 G~~~~v~gg~~~~~~e  268 (278)
T 2bgk_A          253 GLNLVIDGGYTRTNPA  268 (278)
T ss_dssp             SCEEEESTTGGGCCTH
T ss_pred             CCEEEECCcccccCCc
Confidence            8999998874 34443

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.82  E-value=1.1e-19  Score=182.49  Aligned_cols=197  Identities=16%  Similarity=0.104  Sum_probs=135.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchh-------hhcCCCcEEeecCCCCHHHHHHHhc--CCcE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR--GVRS  166 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~-------~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~  166 (294)
                      ...+|+||||||+|+||++++++|+++|++|++++|+.....       .....+++++.+|++|.+.+.++++  ++|+
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~   87 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDS   87 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence            346789999999999999999999999999999999764321       1123578899999999999999998  8999


Q ss_pred             EEEcCCc----------------------hHHhhhhhcCCCEEEEecccccccCCC------Cch---hccc-hhHHHHH
Q 022625          167 IICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSG------GIQ---ALMK-GNARKLA  214 (294)
Q Consensus       167 Vi~~~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~------~~~---~~~~-~~~~~~~  214 (294)
                      |||+++.                      .+.+++++.+++|||++||..++....      +..   +..+ ..+...|
T Consensus        88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK  167 (699)
T 1z45_A           88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTK  167 (699)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHH
T ss_pred             EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHH
Confidence            9998321                      144567778999999999988764311      000   0001 1122234


Q ss_pred             HHHHHHHHh------CCCCEEEEEccceecCCCC------------Cc--------------ce-eec------cCCCCC
Q 022625          215 EQDESMLMA------SGIPYTIIRTGVLQNTPGG------------KQ--------------GF-QFE------EGCAAN  255 (294)
Q Consensus       215 ~~ae~~l~~------~gl~~tivRPg~l~~~~~~------------~~--------------~~-~~~------~g~~~~  255 (294)
                      ..+|.+++.      .+++++++||+.+++ +..            ..              .+ .++      .+....
T Consensus       168 ~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  246 (699)
T 1z45_A          168 YAIENILNDLYNSDKKSWKFAILRYFNPIG-AHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIR  246 (699)
T ss_dssp             HHHHHHHHHHHHHSTTSCEEEEEEECEEEC-CCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEE
T ss_pred             HHHHHHHHHHHHhccCCCcEEEEEeccccC-CCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeE
Confidence            456665543      689999999998773 210            00              01 111      234456


Q ss_pred             CCcCHHHHHHHHHHHhhCC------CCCCcEEEEecCC-cccccc
Q 022625          256 GSLSKEDAAFICVEALESI------PQTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       256 ~~Is~eDvA~~iv~aL~~~------~~~g~~~~v~~g~-~~~~ei  293 (294)
                      ++|+++|+|++++.+++.+      ...+++||+++++ .++.|+
T Consensus       247 ~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el  291 (699)
T 1z45_A          247 DYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEV  291 (699)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHH
T ss_pred             eeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHH
Confidence            7899999999999988642      2346899998875 455543

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.82  E-value=2.1e-19  Score=157.34  Aligned_cols=192  Identities=13%  Similarity=0.117  Sum_probs=132.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|++++..+.       .+..+.++.+|++|.++++++++      
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            35679999999999999999999999999999999987654322       24568899999999999988876      


Q ss_pred             -CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 -GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                       ++|+|||+++.     +                         +.+.+++.+.++||++||..+..+..+...|..+|..
T Consensus        84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  163 (248)
T 2pnf_A           84 DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAG  163 (248)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHHHH
Confidence             78999998320     0                         1112345678899999998765544444455444331


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhCC--CCCCcEEEE
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESI--PQTGLIFEV  283 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~--~~~g~~~~v  283 (294)
                        .+.+.....+...+++++++|||.+.........    ..+........+++++|+|++++.++..+  ...|++|++
T Consensus       164 ~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  243 (248)
T 2pnf_A          164 LIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHV  243 (248)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcCCCcEEEe
Confidence              1122222233457899999999987632111100    00111222345789999999999998764  246899999


Q ss_pred             ecCC
Q 022625          284 CEIS  287 (294)
Q Consensus       284 ~~g~  287 (294)
                      .+|.
T Consensus       244 ~gg~  247 (248)
T 2pnf_A          244 NGGM  247 (248)
T ss_dssp             STTC
T ss_pred             CCCc
Confidence            8773

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.82  E-value=3.6e-19  Score=157.89  Aligned_cols=192  Identities=13%  Similarity=0.104  Sum_probs=136.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.   .+..+.++.+|++|.++++++++       ++|
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   84 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLD   84 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            35689999999999999999999999999999999998765433   34578899999999999888876       789


Q ss_pred             EEEEcCCc-----h---------------------HHh----hhhhcC-CCEEEEecccccccCCCCchhccchhHH--H
Q 022625          166 SIICPSEG-----F---------------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--K  212 (294)
Q Consensus       166 ~Vi~~~~~-----~---------------------~~~----~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~--~  212 (294)
                      ++||+++.     +                     +.+    .+.+.+ ..+||++||..++.+......|..+|..  .
T Consensus        85 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  164 (259)
T 4e6p_A           85 ILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVIS  164 (259)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence            99998321     0                     111    122333 5699999999888776666666555432  1


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCCC----------------cceeeccCCCCCCCcCHHHHHHHHHHHhhCCC-
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----------------QGFQFEEGCAANGSLSKEDAAFICVEALESIP-  275 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----------------~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-  275 (294)
                      +.+.....+...|+++++|+||.+.. +...                ....+..+.....+.+++|+|+++++++.... 
T Consensus       165 ~~~~la~e~~~~gi~vn~v~PG~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~  243 (259)
T 4e6p_A          165 LTQSAGLDLIKHRINVNAIAPGVVDG-EHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESD  243 (259)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCS-TTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGT
T ss_pred             HHHHHHHHhhhcCCEEEEEEECCCcc-chhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccC
Confidence            22222333445799999999999873 2210                00011122344567899999999999886543 


Q ss_pred             -CCCcEEEEecCCc
Q 022625          276 -QTGLIFEVCEISN  288 (294)
Q Consensus       276 -~~g~~~~v~~g~~  288 (294)
                       ..|++|++.+|..
T Consensus       244 ~itG~~i~vdgG~~  257 (259)
T 4e6p_A          244 YIVSQTYNVDGGNW  257 (259)
T ss_dssp             TCCSCEEEESTTSS
T ss_pred             CCCCCEEEECcChh
Confidence             4689999988854

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.82  E-value=6.7e-19  Score=155.77  Aligned_cols=192  Identities=13%  Similarity=0.033  Sum_probs=134.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---CCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+++++.+..   +..+.++.+|++|.++++++++       ++|+
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46799999999999999999999999999999999987654322   2357889999999999888776       7899


Q ss_pred             EEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHH
Q 022625          167 IICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA  214 (294)
Q Consensus       167 Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~  214 (294)
                      +||+++.     +                         +...+++.+.++||++||..++.+......|..+|..  .+.
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~  162 (254)
T 1hdc_A           83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLS  162 (254)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHHHH
Confidence            9998320     0                         1223455678899999999887665555566544432  122


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCCC----CCcceeeccCCCCCCCc-CHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQFEEGCAANGSL-SKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~~----~~~~~~~~~g~~~~~~I-s~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      +.....+...|+++++||||++.....    ......+........+. +++|+|+++++++..+.  ..|+.+.+.+|.
T Consensus       163 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  242 (254)
T 1hdc_A          163 KLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGW  242 (254)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCc
Confidence            223333445799999999998762110    00000011111123356 99999999999987653  468999998875


Q ss_pred             c
Q 022625          288 N  288 (294)
Q Consensus       288 ~  288 (294)
                      .
T Consensus       243 ~  243 (254)
T 1hdc_A          243 T  243 (254)
T ss_dssp             T
T ss_pred             c
Confidence            3

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.82  E-value=5.1e-19  Score=155.64  Aligned_cols=191  Identities=14%  Similarity=0.130  Sum_probs=132.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-Cccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R-~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.| ++++..+.      .+..+.++.+|++|.++++++++       
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35799999999999999999999999999999999 66544321      13468889999999998888776       


Q ss_pred             CCcEEEEcCC----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          163 GVRSIICPSE----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       163 ~~d~Vi~~~~----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      ++|++||+++    + +                         +...+++.+.++||++||..+..+......|..+|.. 
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  161 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGV  161 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHH
Confidence            6899999832    1 0                         1122445677899999998776555555556544431 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc--c--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--G--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~--~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                       .+.+.....+...|+++++|+||++........  .  ..+........+++++|+|+++++++..+.  ..|+.+.+.
T Consensus       162 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vd  241 (246)
T 2uvd_A          162 IGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLNVD  241 (246)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEEC
Confidence             122333333456799999999999763221110  0  001111223457899999999999987643  468999998


Q ss_pred             cCC
Q 022625          285 EIS  287 (294)
Q Consensus       285 ~g~  287 (294)
                      +|.
T Consensus       242 gG~  244 (246)
T 2uvd_A          242 GGM  244 (246)
T ss_dssp             TTS
T ss_pred             cCc
Confidence            874

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.82  E-value=1.1e-19  Score=176.64  Aligned_cols=182  Identities=16%  Similarity=0.144  Sum_probs=126.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc-----
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-----  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-----  173 (294)
                      +|+||||||+|+||++|+++|+++|++|++++|+..+..        .+.+|+.+.  +.++++++|+|||+++.     
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~--------~v~~d~~~~--~~~~l~~~D~Vih~A~~~~~~~  216 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG--------KRFWDPLNP--ASDLLDGADVLVHLAGEPIFGR  216 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT--------CEECCTTSC--CTTTTTTCSEEEECCCC-----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc--------ceeecccch--hHHhcCCCCEEEECCCCccccc
Confidence            789999999999999999999999999999999986532        256777653  45677899999998321     


Q ss_pred             ------------------hHHhh-hhhcCCCEEEEecccccccC-CCC--c---hhccchhHHHHHHHHH---HHHHhCC
Q 022625          174 ------------------FISNA-GSLKGVQHVILLSQLSVYRG-SGG--I---QALMKGNARKLAEQDE---SMLMASG  225 (294)
Q Consensus       174 ------------------~~~~~-~~~~gv~r~V~vSs~~~~~~-~~~--~---~~~~~~~~~~~~~~ae---~~l~~~g  225 (294)
                                        .+.++ ++..++++||++||.++|.. ...  .   .+.........+...|   .++...|
T Consensus       217 ~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~~~~~g  296 (516)
T 3oh8_A          217 FNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAG  296 (516)
T ss_dssp             CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTHHHHHTT
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHHHHHhCC
Confidence                              03344 56678999999999988762 110  0   0011111111222223   3345689


Q ss_pred             CCEEEEEccceecCCCC------------CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC-ccccc
Q 022625          226 IPYTIIRTGVLQNTPGG------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS-NLCEQ  292 (294)
Q Consensus       226 l~~tivRPg~l~~~~~~------------~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~-~~~~e  292 (294)
                      +++++|||+.++ +++.            +....++.+....++|+++|+|++++.++.++.. +.+||+++++ .++.|
T Consensus       297 i~~~ilRp~~v~-Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-~g~~ni~~~~~~s~~e  374 (516)
T 3oh8_A          297 KRVAFIRTGVAL-SGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI-SGPINAVAPNPVSNAD  374 (516)
T ss_dssp             CEEEEEEECEEE-BTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTC-CEEEEESCSCCEEHHH
T ss_pred             CCEEEEEeeEEE-CCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCccc-CCcEEEECCCCCCHHH
Confidence            999999999998 4331            1122344556668899999999999999998664 4589999874 34444

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.81  E-value=3.1e-19  Score=156.02  Aligned_cols=191  Identities=15%  Similarity=0.086  Sum_probs=133.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--CCCcEEeecCCCCHHHHHHHhcC---CcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALRG---VRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~l~~---~d~Vi~~~  171 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|++++..+..  ..+++++.+|++|.++++++++.   +|+|||++
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A   84 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA   84 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECC
Confidence            56799999999999999999999999999999999987654332  13578889999999999998874   69999983


Q ss_pred             C-----ch---------------------HHh----hhhhcC-CCEEEEecccccccCCCCchhccchhHHH--HHHHHH
Q 022625          172 E-----GF---------------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDE  218 (294)
Q Consensus       172 ~-----~~---------------------~~~----~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~ae  218 (294)
                      +     .+                     +.+    .+.+.+ .++||++||..++.+......|..+|...  +.+...
T Consensus        85 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a  164 (244)
T 1cyd_A           85 ALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMA  164 (244)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHH
Confidence            2     00                     111    223345 68999999998877665555664444321  112222


Q ss_pred             HHHHhCCCCEEEEEccceecCCCC----Ccc--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          219 SMLMASGIPYTIIRTGVLQNTPGG----KQG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       219 ~~l~~~gl~~tivRPg~l~~~~~~----~~~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      ..+...++++++||||.+......    ...  ..+..+.....+++++|+|++++.++.++.  ..|+.+++.+|.
T Consensus       165 ~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  241 (244)
T 1cyd_A          165 MELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGY  241 (244)
T ss_dssp             HHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred             HHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcccCCEEEECCCc
Confidence            223347899999999987632110    000  011122334578999999999999997653  468999998774

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.81  E-value=4.7e-19  Score=157.26  Aligned_cols=192  Identities=11%  Similarity=0.053  Sum_probs=133.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      .+.+|+++||||+|+||++++++|+++|++|++++|++++..+.   ....+.++.+|++|.++++++++       ++|
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD   88 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFD   88 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            35679999999999999999999999999999999998765432   22367889999999999888876       789


Q ss_pred             EEEEcCC-----ch---------------------H----HhhhhhcC-CCEEEEecccccccCCCCchhccchhHH--H
Q 022625          166 SIICPSE-----GF---------------------I----SNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--K  212 (294)
Q Consensus       166 ~Vi~~~~-----~~---------------------~----~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~--~  212 (294)
                      +|||+++     .+                     +    ...+.+.+ ..+||++||..+..+......|..+|..  .
T Consensus        89 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  168 (263)
T 3ak4_A           89 LLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFG  168 (263)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHHH
Confidence            9999832     00                     1    11233345 6899999998877665555556444431  1


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCCC-------------cc--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-------------QG--FQFEEGCAANGSLSKEDAAFICVEALESIP--  275 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-------------~~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--  275 (294)
                      +.+.....+...|+++++||||.+.......             ..  ..+........+.+++|+|+++++++..+.  
T Consensus       169 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~  248 (263)
T 3ak4_A          169 WTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARF  248 (263)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            2222233344579999999999876211000             00  001112233457899999999999997653  


Q ss_pred             CCCcEEEEecCC
Q 022625          276 QTGLIFEVCEIS  287 (294)
Q Consensus       276 ~~g~~~~v~~g~  287 (294)
                      ..|++|++.+|-
T Consensus       249 ~tG~~~~vdgG~  260 (263)
T 3ak4_A          249 MTGQGINVTGGV  260 (263)
T ss_dssp             CCSCEEEESSSS
T ss_pred             CCCCEEEECcCE
Confidence            468999998874

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.81  E-value=1.2e-18  Score=152.48  Aligned_cols=192  Identities=16%  Similarity=0.083  Sum_probs=133.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHHhc---CCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR---GVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~---~~d~Vi~~  170 (294)
                      .+.+|+|+||||+|+||++++++|+++|++|+++.|++++..+...  .+++++.+|++|.++++++++   .+|+|||+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence            3567999999999999999999999999999999999876543321  357788999999999999886   46999998


Q ss_pred             CCc-----h---------------------HHh----hhhhcC-CCEEEEecccccccCCCCchhccchhHHH--HHHHH
Q 022625          171 SEG-----F---------------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD  217 (294)
Q Consensus       171 ~~~-----~---------------------~~~----~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~a  217 (294)
                      ++.     +                     +.+    .+.+.+ .++||++||..++.+..+...|..+|...  +.+..
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  163 (244)
T 3d3w_A           84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVM  163 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             CccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHHHHHHHH
Confidence            320     0                     111    223345 68999999998877665555665544321  11112


Q ss_pred             HHHHHhCCCCEEEEEccceecCCCC----Ccc--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          218 ESMLMASGIPYTIIRTGVLQNTPGG----KQG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       218 e~~l~~~gl~~tivRPg~l~~~~~~----~~~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      ...+...++++++||||.+......    ...  ..+........+++++|+|+++++++.++.  ..|+.|++.+|.
T Consensus       164 a~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  241 (244)
T 3d3w_A          164 ALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             HHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            2223346899999999988732211    000  011122233567899999999999997643  468999998874

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.81  E-value=8.1e-19  Score=157.72  Aligned_cols=193  Identities=16%  Similarity=0.149  Sum_probs=132.4

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      ..+.+|+|+||||+|+||++++++|+++|++|+++.|++++..+.      .+..+.++.+|++|.++++++++      
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            456789999999999999999999999999999999887654332      13468889999999999888774      


Q ss_pred             -CCcEEEEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 -GVRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 -~~d~Vi~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                       ++|+|||+++.             +                 +...+.+.+.++||++||..+..+......|..+|..
T Consensus       120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a  199 (285)
T 2c07_A          120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAG  199 (285)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHH
Confidence             67999998320             0                 1112345677899999998776555555555444431


Q ss_pred             H--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcce----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       212 ~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                      .  +.+.....+...|+++++|+||.+..........    .+........+++++|+|+++++++..+.  ..|+.|++
T Consensus       200 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v  279 (285)
T 2c07_A          200 VIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVI  279 (285)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEe
Confidence            1  2222223344579999999999886322111000    01111222447899999999999987643  46899999


Q ss_pred             ecCC
Q 022625          284 CEIS  287 (294)
Q Consensus       284 ~~g~  287 (294)
                      .+|.
T Consensus       280 ~gG~  283 (285)
T 2c07_A          280 DGGL  283 (285)
T ss_dssp             STTS
T ss_pred             CCCc
Confidence            8774

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.81  E-value=1e-18  Score=154.17  Aligned_cols=192  Identities=15%  Similarity=0.082  Sum_probs=131.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+.+|+|+||||+|+||++++++|+++|++|++++|+.++..+.      .+..++++.+|++|.++++++++       
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEG   89 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35679999999999999999999999999999999987654321      13468899999999999888775       


Q ss_pred             CCcEEEEcCC-----c-h---------------------HHh----hhhhcCCCEEEEecccccccCCCCc--hhccchh
Q 022625          163 GVRSIICPSE-----G-F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGI--QALMKGN  209 (294)
Q Consensus       163 ~~d~Vi~~~~-----~-~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~--~~~~~~~  209 (294)
                      ++|+|||+++     + +                     +.+    .+.+.+..+||++||..+..+....  ..|..+|
T Consensus        90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK  169 (260)
T 3awd_A           90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASK  169 (260)
T ss_dssp             CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHHH
Confidence            6899999832     1 0                     111    1234577899999998776543333  4454333


Q ss_pred             HHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCC-c-c-----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-Q-G-----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       210 ~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-~-~-----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      ...  +.+.....+...|+++++||||.+.. +... . .     ..+..+.....+++++|+|++++.++..+.  ..|
T Consensus       170 ~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  248 (260)
T 3awd_A          170 AGVHQYIRSLAAEWAPHGIRANAVAPTYIET-TLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTG  248 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-TTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeeeecc-chhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhccCCC
Confidence            211  11222222334799999999999873 3221 0 0     011122233457899999999999987543  468


Q ss_pred             cEEEEecCCc
Q 022625          279 LIFEVCEISN  288 (294)
Q Consensus       279 ~~~~v~~g~~  288 (294)
                      ++|++.+|..
T Consensus       249 ~~~~v~gg~~  258 (260)
T 3awd_A          249 AIVNVDAGFT  258 (260)
T ss_dssp             CEEEESTTTT
T ss_pred             cEEEECCcee
Confidence            9999988754

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.81  E-value=1.2e-18  Score=154.96  Aligned_cols=192  Identities=13%  Similarity=0.101  Sum_probs=135.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--------CCCcEEeecCCCCHHHHHHHhc-----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+..        +..+.++.+|++|.++++++++     
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999986643321        4568889999999998888775     


Q ss_pred             --CCcEEEEcCC-----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchh
Q 022625          163 --GVRSIICPSE-----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN  209 (294)
Q Consensus       163 --~~d~Vi~~~~-----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~  209 (294)
                        ++|++||+++     + +                         +...+++.+.++||++||..+..+......|..+|
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  169 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAK  169 (267)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHH
Confidence              6799999822     1 1                         12234556788999999998876655555665544


Q ss_pred             HH--HHHHHHHHHHHhCCCCEEEEEccceecCCC--------CCcce----eeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          210 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPG--------GKQGF----QFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       210 ~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~--------~~~~~----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      ..  .+.+.....+...|+++++|+||.+.....        .....    .+........+.+++|+|+++++++..+.
T Consensus       170 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~  249 (267)
T 1iy8_A          170 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA  249 (267)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccc
Confidence            31  122333333455799999999998762110        00000    11111222346799999999999987643


Q ss_pred             --CCCcEEEEecCC
Q 022625          276 --QTGLIFEVCEIS  287 (294)
Q Consensus       276 --~~g~~~~v~~g~  287 (294)
                        ..|+.+.+.+|.
T Consensus       250 ~~~tG~~i~vdGG~  263 (267)
T 1iy8_A          250 SYVNATVVPIDGGQ  263 (267)
T ss_dssp             TTCCSCEEEESTTT
T ss_pred             cCCCCCEEEECCCc
Confidence              478999998874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.81  E-value=1.4e-18  Score=153.14  Aligned_cols=191  Identities=14%  Similarity=0.044  Sum_probs=131.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc-cchhhh---cCCCcEEeecCCCCHHHHHHHh-------cCCc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES---FGTYVESMAGDASNKKFLKTAL-------RGVR  165 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~-~~~~~~---~~~~v~~v~~D~~d~~~l~~~l-------~~~d  165 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|++ +++.+.   .+..+.++.+|++|.+++++++       .++|
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            4679999999999999999999999999999999998 554321   2446888999999998888775       3789


Q ss_pred             EEEEcCC----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HH
Q 022625          166 SIICPSE----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL  213 (294)
Q Consensus       166 ~Vi~~~~----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~  213 (294)
                      ++||+++    + +                         +...+++.+.++||++||..++.+......|..+|..  .+
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  164 (249)
T 2ew8_A           85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGF  164 (249)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHHHH
Confidence            9999832    0 0                         1112455677899999999887766665566554432  12


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCC-Ccc-e--eeccC--CCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGG-KQG-F--QFEEG--CAANGSLSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~-~~~-~--~~~~g--~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                      .+.....+...|+++++|+||++...... ... .  .....  .....+.+++|+|+++++++..+.  ..|+.+++.+
T Consensus       165 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdG  244 (249)
T 2ew8_A          165 TRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDG  244 (249)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECC
Confidence            22333334457999999999987632211 100 0  00000  122346789999999999987543  4689999988


Q ss_pred             CC
Q 022625          286 IS  287 (294)
Q Consensus       286 g~  287 (294)
                      |-
T Consensus       245 G~  246 (249)
T 2ew8_A          245 GM  246 (249)
T ss_dssp             SC
T ss_pred             Cc
Confidence            74

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.81  E-value=3.8e-19  Score=156.15  Aligned_cols=191  Identities=13%  Similarity=0.142  Sum_probs=132.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cC--CCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~--~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|++++..+.   ..  ..++++.+|++|.+++.++++       .+
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4679999999999999999999999999999999987654332   11  468899999999998887776       48


Q ss_pred             cEEEEcCCc-----h-------------------------HHhhhhhcCC-CEEEEecccccccCCCCchhccchhHHH-
Q 022625          165 RSIICPSEG-----F-------------------------ISNAGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNARK-  212 (294)
Q Consensus       165 d~Vi~~~~~-----~-------------------------~~~~~~~~gv-~r~V~vSs~~~~~~~~~~~~~~~~~~~~-  212 (294)
                      |+|||+++.     +                         +.+.+++.+. ++||++||..++.+......|..+|... 
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  163 (251)
T 1zk4_A           84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVR  163 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHHHH
Confidence            999998320     0                         1223455666 7999999998876655555665544321 


Q ss_pred             -HHHHHHHHHH--hCCCCEEEEEccceecCCCCC-c-c---eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEE
Q 022625          213 -LAEQDESMLM--ASGIPYTIIRTGVLQNTPGGK-Q-G---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE  282 (294)
Q Consensus       213 -~~~~ae~~l~--~~gl~~tivRPg~l~~~~~~~-~-~---~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~  282 (294)
                       +.+.....+.  ..++++++||||++....... . .   ..+........+++++|+|+++++++.++.  ..|+.|+
T Consensus       164 ~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  243 (251)
T 1zk4_A          164 IMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFV  243 (251)
T ss_dssp             HHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccccCcEEE
Confidence             1121112222  578999999999876311000 0 0   001111222457899999999999997643  4689999


Q ss_pred             EecCC
Q 022625          283 VCEIS  287 (294)
Q Consensus       283 v~~g~  287 (294)
                      +.+|.
T Consensus       244 v~gG~  248 (251)
T 1zk4_A          244 VDGGY  248 (251)
T ss_dssp             ESTTG
T ss_pred             ECCCc
Confidence            98875

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.81  E-value=6.7e-19  Score=155.68  Aligned_cols=192  Identities=20%  Similarity=0.144  Sum_probs=129.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------C-------CCcEEeecCCCCHHHHHHHhcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------G-------TYVESMAGDASNKKFLKTALRG  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~-------~~v~~v~~D~~d~~~l~~~l~~  163 (294)
                      +.+|+|+||||+|+||++++++|+++|++|+++.|+.++..+..      +       ..++++.+|++|.++++++++.
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            46799999999999999999999999999999999986643321      1       3578899999999988887765


Q ss_pred             C--------cEEEEcCC----c-h---------------------HHh----hhhhcC-CCEEEEecccccccCCCCchh
Q 022625          164 V--------RSIICPSE----G-F---------------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQA  204 (294)
Q Consensus       164 ~--------d~Vi~~~~----~-~---------------------~~~----~~~~~g-v~r~V~vSs~~~~~~~~~~~~  204 (294)
                      +        |+|||+++    + +                     +.+    .+.+.+ .++||++||..+..+..+...
T Consensus        85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  164 (264)
T 2pd6_A           85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTN  164 (264)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBHH
T ss_pred             HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCChh
Confidence            3        99999832    0 0                     111    233345 679999999877655555555


Q ss_pred             ccchhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--C
Q 022625          205 LMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--Q  276 (294)
Q Consensus       205 ~~~~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~  276 (294)
                      |..+|...  +.+.....+...|+++++||||.+.........    ..+..+.....+.+++|+|++++.++..+.  .
T Consensus       165 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  244 (264)
T 2pd6_A          165 YAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYI  244 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCcccCC
Confidence            64444311  122222333447999999999987732211100    001111222446799999999999987543  5


Q ss_pred             CCcEEEEecCCc
Q 022625          277 TGLIFEVCEISN  288 (294)
Q Consensus       277 ~g~~~~v~~g~~  288 (294)
                      .|+.+++.+|..
T Consensus       245 ~G~~~~v~gg~~  256 (264)
T 2pd6_A          245 TGTSVEVTGGLF  256 (264)
T ss_dssp             CSCEEEESTTC-
T ss_pred             CCCEEEECCCce
Confidence            689999988754

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.81  E-value=1.5e-18  Score=155.92  Aligned_cols=193  Identities=13%  Similarity=0.038  Sum_probs=133.9

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-ccchhhh-------cCCCcEEeecCCCCHHHHHHHhc----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES-------FGTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~-~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+ .+.....       .+..+.++.+|++|.++++++++    
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  100 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD  100 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999994 3332221       13578899999999998888775    


Q ss_pred             ---CCcEEEEcCCc-----h---------------------H----HhhhhhcCCCEEEEecccccccCCCCchhccchh
Q 022625          163 ---GVRSIICPSEG-----F---------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN  209 (294)
Q Consensus       163 ---~~d~Vi~~~~~-----~---------------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~  209 (294)
                         ++|++||+++.     +                     +    ...+++.+..+||++||..+..+......|..+|
T Consensus       101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  180 (281)
T 3v2h_A          101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAK  180 (281)
T ss_dssp             HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHH
Confidence               67999998321     0                     1    1123556778999999998877666666665554


Q ss_pred             HH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc----------------ceeeccCCCCCCCcCHHHHHHHHHHHh
Q 022625          210 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----------------GFQFEEGCAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       210 ~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----------------~~~~~~g~~~~~~Is~eDvA~~iv~aL  271 (294)
                      ..  .+.+.....+...|+++++|+||.+........                ...+..+.....+.+++|+|+++++++
T Consensus       181 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~  260 (281)
T 3v2h_A          181 HGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLA  260 (281)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHc
Confidence            32  122223333445799999999998763211100                001223344456789999999999999


Q ss_pred             hCCC--CCCcEEEEecCC
Q 022625          272 ESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       272 ~~~~--~~g~~~~v~~g~  287 (294)
                      ..+.  ..|+++++.+|-
T Consensus       261 s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          261 GDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             SSGGGGCCSCEEEESTTG
T ss_pred             CCCcCCCCCcEEEECCCc
Confidence            7654  479999998874

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.81  E-value=2.4e-18  Score=152.30  Aligned_cols=193  Identities=16%  Similarity=0.117  Sum_probs=131.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---CCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|++++..+..   +..+.++.+|++|.++++++++       .+|
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   83 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVH   83 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            356899999999999999999999999999999999987654432   3468899999999998888776       789


Q ss_pred             EEEEcCCc-----------------h-------------HHh----hhhh------cCCCEEEEecccccccCCCCchhc
Q 022625          166 SIICPSEG-----------------F-------------ISN----AGSL------KGVQHVILLSQLSVYRGSGGIQAL  205 (294)
Q Consensus       166 ~Vi~~~~~-----------------~-------------~~~----~~~~------~gv~r~V~vSs~~~~~~~~~~~~~  205 (294)
                      ++||+++.                 +             +.+    .+++      .+..+||++||..+..+......|
T Consensus        84 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  163 (257)
T 3tpc_A           84 GLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAY  163 (257)
T ss_dssp             EEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHH
T ss_pred             EEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcch
Confidence            99998220                 0             111    1222      245789999999887766666666


Q ss_pred             cchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCC----cceeeccCCCC-CCCcCHHHHHHHHHHHhhCCCCCC
Q 022625          206 MKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQFEEGCAA-NGSLSKEDAAFICVEALESIPQTG  278 (294)
Q Consensus       206 ~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----~~~~~~~g~~~-~~~Is~eDvA~~iv~aL~~~~~~g  278 (294)
                      ..+|..  .+.+.....+...|+++++|+||.+.......    ....+...... ..+.+++|+|++++++++.+...|
T Consensus       164 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~~~itG  243 (257)
T 3tpc_A          164 AASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICENTMLNG  243 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSCSCBCHHHHHHHHHHHHHCTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcccCCcCC
Confidence            555432  12223333345579999999999986322111    00111112222 456799999999999998866789


Q ss_pred             cEEEEecCCc
Q 022625          279 LIFEVCEISN  288 (294)
Q Consensus       279 ~~~~v~~g~~  288 (294)
                      +++++.+|-.
T Consensus       244 ~~i~vdGG~~  253 (257)
T 3tpc_A          244 EVIRLDGALR  253 (257)
T ss_dssp             CEEEESTTCC
T ss_pred             cEEEECCCcc
Confidence            9999988753

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.81  E-value=1.1e-18  Score=155.22  Aligned_cols=193  Identities=15%  Similarity=0.090  Sum_probs=130.4

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|++++|+.++..+... .++.++.+|++|.++++++++       .+|+
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            45678999999999999999999999999999999999876443322 358899999999998887775       5799


Q ss_pred             EEEcCCc------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HHH
Q 022625          167 IICPSEG------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAE  215 (294)
Q Consensus       167 Vi~~~~~------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~  215 (294)
                      +||+++.            +                 +...+++.+..+||++||..+..+......|..+|..-  +.+
T Consensus       103 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~  182 (260)
T 3gem_A          103 VVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTL  182 (260)
T ss_dssp             EEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHHH
T ss_pred             EEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHHHH
Confidence            9998321            0                 11123455678999999998887766666665544311  122


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCCCCcc--eeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCc
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPGGKQG--FQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISN  288 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~~~~~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~  288 (294)
                      .....+. .++++++|+||.+.........  ..+........+.+++|+|+++++++..+...|++|++.+|..
T Consensus       183 ~la~e~~-~~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~v~~L~~~~~itG~~i~vdGG~~  256 (260)
T 3gem_A          183 SFAARFA-PLVKVNGIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLLDSTYVTGTTLTVNGGRH  256 (260)
T ss_dssp             HHHHHHT-TTCEEEEEEECTTCC---------------CCSCCCCCTHHHHHHHHHHHHCSSCCSCEEEESTTTT
T ss_pred             HHHHHHC-CCCEEEEEeecccccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhCCCCCCCEEEECCCcc
Confidence            2222222 3699999999987632211110  1111122223455789999999999976667899999988753

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.81  E-value=5.9e-19  Score=155.13  Aligned_cols=196  Identities=13%  Similarity=0.103  Sum_probs=137.1

Q ss_pred             CCCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc---CCcE
Q 022625           93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR---GVRS  166 (294)
Q Consensus        93 ~~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~---~~d~  166 (294)
                      ......+|+|+||||+|+||++++++|+++|++|++++|+.+++.+.   ....+.++.+|++|.+++.++++   ++|+
T Consensus         8 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~   87 (249)
T 3f9i_A            8 HMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDI   87 (249)
T ss_dssp             -CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            34566789999999999999999999999999999999998765443   34578899999999999998887   5799


Q ss_pred             EEEcCCc-------------h-------------H----HhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHH
Q 022625          167 IICPSEG-------------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA  214 (294)
Q Consensus       167 Vi~~~~~-------------~-------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~  214 (294)
                      +||+++.             +             +    ...+.+.+..+||++||..++.+......|..+|..  .+.
T Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  167 (249)
T 3f9i_A           88 LVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMT  167 (249)
T ss_dssp             EEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHHH
Confidence            9998321             0             1    112344667899999999887766666666554431  122


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      +.....+...|+++++|+||.+.........    ..+..+.....+.+++|+|+++++++.++.  ..|++|++.+|..
T Consensus       168 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          168 KSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGML  247 (249)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCEe
Confidence            2223334457999999999998632211100    011122344567889999999999997654  4699999988754

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.81  E-value=3.5e-19  Score=157.48  Aligned_cols=191  Identities=15%  Similarity=0.068  Sum_probs=132.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch--hhh--cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--MES--FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~--~~~--~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+.+..  .+.  .+..+.++.+|++|.++++++++       ++|
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3579999999999999999999999999999999987521  111  13467889999999999988887       789


Q ss_pred             EEEEcCC----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HH
Q 022625          166 SIICPSE----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL  213 (294)
Q Consensus       166 ~Vi~~~~----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~  213 (294)
                      ++||+++    + +                         +...+++.+.++||++||..++.+......|..+|..  .+
T Consensus        82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  161 (255)
T 2q2v_A           82 ILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGL  161 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHHHHH
Confidence            9999832    0 0                         1223456678899999999887665555556444431  11


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCC-----c-----c----eee-ccCCCCCCCcCHHHHHHHHHHHhhCCC--C
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGK-----Q-----G----FQF-EEGCAANGSLSKEDAAFICVEALESIP--Q  276 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-----~-----~----~~~-~~g~~~~~~Is~eDvA~~iv~aL~~~~--~  276 (294)
                      .+.....+...|+++++|+||.+.......     .     .    ..+ ........+++++|+|+++++++..+.  .
T Consensus       162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~  241 (255)
T 2q2v_A          162 TKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQV  241 (255)
T ss_dssp             HHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCC
Confidence            222222233478999999999876211000     0     0    001 122233457899999999999887644  4


Q ss_pred             CCcEEEEecCC
Q 022625          277 TGLIFEVCEIS  287 (294)
Q Consensus       277 ~g~~~~v~~g~  287 (294)
                      .|+.|++.+|.
T Consensus       242 tG~~~~vdgG~  252 (255)
T 2q2v_A          242 RGAAWNVDGGW  252 (255)
T ss_dssp             CSCEEEESTTG
T ss_pred             CCCEEEECCCc
Confidence            58999998874

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.81  E-value=2.7e-19  Score=156.75  Aligned_cols=175  Identities=10%  Similarity=0.077  Sum_probs=121.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc----CCcEEEEcCC--
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPSE--  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~----~~d~Vi~~~~--  172 (294)
                      ||+|+||||+|+||++++++|+++|++|++++|++++...       .+.+|++|.++++++++    ++|+|||+++  
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~   73 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG   73 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------cccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence            4689999999999999999999999999999998865432       26789999999988886    8899999832  


Q ss_pred             ---c-h-------------HHhh----hhhcCCCEEEEecccccccCC--------------------------CCchhc
Q 022625          173 ---G-F-------------ISNA----GSLKGVQHVILLSQLSVYRGS--------------------------GGIQAL  205 (294)
Q Consensus       173 ---~-~-------------~~~~----~~~~gv~r~V~vSs~~~~~~~--------------------------~~~~~~  205 (294)
                         . +             +.++    +++.+.+|||++||..++.+.                          .+...|
T Consensus        74 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y  153 (255)
T 2dkn_A           74 VTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAY  153 (255)
T ss_dssp             TTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHH
T ss_pred             CcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhH
Confidence               1 0             2222    334467899999999887543                          111222


Q ss_pred             cchhHHHHHHHHHHHH-------HhCCCCEEEEEccceecCCCC-------Ccceee--ccCCCCCCCcCHHHHHHHHHH
Q 022625          206 MKGNARKLAEQDESML-------MASGIPYTIIRTGVLQNTPGG-------KQGFQF--EEGCAANGSLSKEDAAFICVE  269 (294)
Q Consensus       206 ~~~~~~~~~~~ae~~l-------~~~gl~~tivRPg~l~~~~~~-------~~~~~~--~~g~~~~~~Is~eDvA~~iv~  269 (294)
                      ..+     |...|.++       ...|+++++||||.+.. +..       ......  ..+ ....+++++|+|++++.
T Consensus       154 ~~s-----K~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dva~~~~~  226 (255)
T 2dkn_A          154 AGS-----KYAVTCLARRNVVDWAGRGVRLNVVAPGAVET-PLLQASKADPRYGESTRRFVA-PLGRGSEPREVAEAIAF  226 (255)
T ss_dssp             HHH-----HHHHHHHHHHTHHHHHHTTCEEEEEEECCBCS-HHHHHHHHCTTTHHHHHSCCC-TTSSCBCHHHHHHHHHH
T ss_pred             HHH-----HHHHHHHHHHHHHHHhhcCcEEEEEcCCcccc-hhhhhcccchhhHHHHHHHHH-HhcCCCCHHHHHHHHHH
Confidence            222     22223322       23699999999998762 210       000000  001 34568999999999999


Q ss_pred             HhhCC--CCCCcEEEEecCC
Q 022625          270 ALESI--PQTGLIFEVCEIS  287 (294)
Q Consensus       270 aL~~~--~~~g~~~~v~~g~  287 (294)
                      ++.++  ...|++|++.+|.
T Consensus       227 l~~~~~~~~~G~~~~v~gg~  246 (255)
T 2dkn_A          227 LLGPQASFIHGSVLFVDGGM  246 (255)
T ss_dssp             HHSGGGTTCCSCEEEESTTH
T ss_pred             HhCCCcccceeeEEEecCCe
Confidence            99875  3568999998874

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.80  E-value=2.7e-18  Score=151.82  Aligned_cols=192  Identities=13%  Similarity=0.067  Sum_probs=135.0

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      .+.+|+|+||||+|+||++++++|+++|++|+++.|+.++..+.   .+..+.++.+|++|.++++++++       ++|
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   88 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD   88 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence            45689999999999999999999999999999999998765432   24578999999999999988876       789


Q ss_pred             EEEEcCCc--------------h------------------HHhh----hhhc------CCCEEEEecccccccCCCCch
Q 022625          166 SIICPSEG--------------F------------------ISNA----GSLK------GVQHVILLSQLSVYRGSGGIQ  203 (294)
Q Consensus       166 ~Vi~~~~~--------------~------------------~~~~----~~~~------gv~r~V~vSs~~~~~~~~~~~  203 (294)
                      +|||+++.              .                  +.++    +++.      +..+||++||..++.+..+..
T Consensus        89 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  168 (265)
T 2o23_A           89 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA  168 (265)
T ss_dssp             EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred             EEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCc
Confidence            99998220              0                  1111    2222      678999999998876655555


Q ss_pred             hccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCC-CCCcCHHHHHHHHHHHhhCCCC
Q 022625          204 ALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAA-NGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       204 ~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~-~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      .|..+|..  .+.+.....+...++++++|+||++.........    ..+...... ..+.+++|+|+++++++..+..
T Consensus       169 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  248 (265)
T 2o23_A          169 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPFL  248 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHHCTTC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcCCCCCHHHHHHHHHHHhhcCcc
Confidence            66544431  1222333334557999999999987632211100    001111111 4567999999999999987667


Q ss_pred             CCcEEEEecCC
Q 022625          277 TGLIFEVCEIS  287 (294)
Q Consensus       277 ~g~~~~v~~g~  287 (294)
                      .|+.+.+.+|-
T Consensus       249 ~G~~i~vdgG~  259 (265)
T 2o23_A          249 NGEVIRLDGAI  259 (265)
T ss_dssp             CSCEEEESTTC
T ss_pred             CceEEEECCCE
Confidence            89999998874

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.80  E-value=2.4e-18  Score=152.50  Aligned_cols=193  Identities=14%  Similarity=0.123  Sum_probs=134.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+.      .+..+.++.+|++|.++++++++       
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            35689999999999999999999999999999999998765432      23468899999999988887775       


Q ss_pred             CCcEEEEcCCc-----h---------------------HHhh----h-hhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 GVRSIICPSEG-----F---------------------ISNA----G-SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 ~~d~Vi~~~~~-----~---------------------~~~~----~-~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      ++|++||+++.     +                     +.++    + ++.+..+||++||..+..+......|..+|..
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  162 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAG  162 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHH
Confidence            67999998321     0                     1111    2 34457899999999887766666666554432


Q ss_pred             --HHHHHHHHHHH-hCCCCEEEEEccceecCCCCCc-------ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCc
Q 022625          212 --KLAEQDESMLM-ASGIPYTIIRTGVLQNTPGGKQ-------GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGL  279 (294)
Q Consensus       212 --~~~~~ae~~l~-~~gl~~tivRPg~l~~~~~~~~-------~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~  279 (294)
                        .+.+.....+. ..|+++++|+||.+........       ...+........+.+++|+|+++++++..+.  ..|+
T Consensus       163 ~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~  242 (257)
T 3imf_A          163 VLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGT  242 (257)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCC
Confidence              12222222233 5699999999998863221110       0011112233456799999999999987654  4789


Q ss_pred             EEEEecCCc
Q 022625          280 IFEVCEISN  288 (294)
Q Consensus       280 ~~~v~~g~~  288 (294)
                      .+++.+|..
T Consensus       243 ~i~vdGG~~  251 (257)
T 3imf_A          243 CMTMDGGQH  251 (257)
T ss_dssp             EEEESTTTT
T ss_pred             EEEECCCcc
Confidence            999987743

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.80  E-value=7.3e-19  Score=157.13  Aligned_cols=195  Identities=13%  Similarity=0.107  Sum_probs=130.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---c------CCCcEEeecCCCCHHHHHHHhc-----
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F------GTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~------~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+++++.+.   .      +..+.++.+|++|.++++++++     
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999998654321   1      2357889999999999888876     


Q ss_pred             --CCcEEEEcCC--------------ch----------------H----HhhhhhcCCCEEEEeccccc-ccCCCCchhc
Q 022625          163 --GVRSIICPSE--------------GF----------------I----SNAGSLKGVQHVILLSQLSV-YRGSGGIQAL  205 (294)
Q Consensus       163 --~~d~Vi~~~~--------------~~----------------~----~~~~~~~gv~r~V~vSs~~~-~~~~~~~~~~  205 (294)
                        ++|++||+++              ..                +    ...+++.+ ++||++||..+ +.+......|
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y  162 (278)
T 1spx_A           84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYY  162 (278)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHH
T ss_pred             cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCccHH
Confidence              7899999832              10                1    11223346 89999999887 6555454555


Q ss_pred             cchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc----c-e--------eeccCCCCCCCcCHHHHHHHHHHH
Q 022625          206 MKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----G-F--------QFEEGCAANGSLSKEDAAFICVEA  270 (294)
Q Consensus       206 ~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~-~--------~~~~g~~~~~~Is~eDvA~~iv~a  270 (294)
                      ..+|..  .+.+.....+...|+++++||||.+........    . .        .+........+.+++|+|++++++
T Consensus       163 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l  242 (278)
T 1spx_A          163 SIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFL  242 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHHH
Confidence            444431  122222333445799999999999863221110    0 0        000011223568999999999998


Q ss_pred             hhCCC---CCCcEEEEecCC-ccccc
Q 022625          271 LESIP---QTGLIFEVCEIS-NLCEQ  292 (294)
Q Consensus       271 L~~~~---~~g~~~~v~~g~-~~~~e  292 (294)
                      +..+.   ..|++|++.+|. .+..|
T Consensus       243 ~s~~~~~~~tG~~~~vdgG~~~~~~~  268 (278)
T 1spx_A          243 ADRKTSSYIIGHQLVVDGGSSLIMGL  268 (278)
T ss_dssp             HCHHHHTTCCSCEEEESTTGGGC---
T ss_pred             cCccccCcccCcEEEECCCcccccCc
Confidence            87643   468999998884 34433

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.80  E-value=1.2e-18  Score=154.51  Aligned_cols=191  Identities=14%  Similarity=0.049  Sum_probs=131.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhhhc-------CCCcEEeecCCCCHHHHHHHhc------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESF-------GTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~-------~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|++++ +.+..       +..+.++.+|++|.++++++++      
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            357999999999999999999999999999999998766 43321       4468889999999998887775      


Q ss_pred             -CCcEEEEcCC----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 -GVRSIICPSE----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 -~~d~Vi~~~~----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                       ++|++||+++    + +                         +...+++.+..+||++||..++.+..+...|..+|..
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  161 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHG  161 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHH
Confidence             6899999832    0 0                         1112345577899999999887665555566544431


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-------------ce--ee-ccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-------------GF--QF-EEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-------------~~--~~-~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                        .+.+.....+...|+++++|+||.+........             ..  .+ ........+.+++|+|+++++++..
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~  241 (260)
T 1x1t_A          162 VVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASD  241 (260)
T ss_dssp             HHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhCh
Confidence              122222233344789999999998763221110             00  00 1111223567999999999999875


Q ss_pred             CC--CCCcEEEEecCC
Q 022625          274 IP--QTGLIFEVCEIS  287 (294)
Q Consensus       274 ~~--~~g~~~~v~~g~  287 (294)
                      +.  ..|++|++.+|.
T Consensus       242 ~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          242 AAAQITGTTVSVDGGW  257 (260)
T ss_dssp             GGTTCCSCEEEESTTG
T ss_pred             hhcCCCCCEEEECCCc
Confidence            43  468999998774

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.80  E-value=2.3e-18  Score=153.06  Aligned_cols=190  Identities=14%  Similarity=0.123  Sum_probs=131.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-------CCcEEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII  168 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi  168 (294)
                      ...+|+++||||+|+||++++++|+++|++|+++.|+.++...   ..++++.+|++|.++++++++       ++|++|
T Consensus        25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  101 (260)
T 3un1_A           25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD---PDIHTVAGDISKPETADRIVREGIERFGRIDSLV  101 (260)
T ss_dssp             HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS---TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            4568999999999999999999999999999999998765432   368899999999999888776       789999


Q ss_pred             EcCCc-----h---------------------HHh----hhhhcCCCEEEEecccccccCCC--CchhccchhHH--HHH
Q 022625          169 CPSEG-----F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSG--GIQALMKGNAR--KLA  214 (294)
Q Consensus       169 ~~~~~-----~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~--~~~~~~~~~~~--~~~  214 (294)
                      |+++.     +                     +.+    .+++.+..+||++||..+..+..  +...|..+|..  .+.
T Consensus       102 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~  181 (260)
T 3un1_A          102 NNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVT  181 (260)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHHHHHH
Confidence            98320     0                     111    23566788999999987754322  22334322221  111


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCCCCCcc-eeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCc
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQG-FQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISN  288 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~-~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~  288 (294)
                      +.....+...|+++++|+||.+......... ..+........+.+++|+|++++++...+...|++|++.+|..
T Consensus       182 ~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~p~~r~~~~~dva~av~~L~~~~~itG~~i~vdGG~~  256 (260)
T 3un1_A          182 RSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLHPVGRMGEIRDVVDAVLYLEHAGFITGEILHVDGGQN  256 (260)
T ss_dssp             HHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTTSTTSSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhccCCCCCCcCHHHHHHHHHHhcccCCCCCcEEEECCCee
Confidence            2222223336899999999998733221111 1122233445577899999999998666557899999988753

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.80  E-value=4.1e-19  Score=157.38  Aligned_cols=193  Identities=15%  Similarity=0.120  Sum_probs=135.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+.      .+..+.++.+|++|.++++++++       
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            45689999999999999999999999999999999998654332      13467889999999988887765       


Q ss_pred             CCcEEEEcCC-----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 GVRSIICPSE-----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 ~~d~Vi~~~~-----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      ++|++||+++     + +                         +...+++.+.++||++||..++.+......|..+|..
T Consensus        91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  170 (260)
T 2zat_A           91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTA  170 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHH
Confidence            7899999832     1 0                         1112345678899999999888766665566554431


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCC----cc--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----~~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                        .+.+.....+...|+++++|+||++.......    ..  ..+........+.+++|+|+++++++..+.  ..|++|
T Consensus       171 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~  250 (260)
T 2zat_A          171 LLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETV  250 (260)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCCEE
Confidence              12222233344579999999999886322110    00  001111123457899999999999887654  368999


Q ss_pred             EEecCCc
Q 022625          282 EVCEISN  288 (294)
Q Consensus       282 ~v~~g~~  288 (294)
                      ++.+|..
T Consensus       251 ~vdgG~~  257 (260)
T 2zat_A          251 VVGGGTA  257 (260)
T ss_dssp             EESTTCC
T ss_pred             EECCCcc
Confidence            9988853

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.80  E-value=4.9e-18  Score=149.73  Aligned_cols=187  Identities=11%  Similarity=0.047  Sum_probs=126.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-------CCcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi~  169 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+++...    .++.++.+|++|.++++++++       ++|++||
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~   80 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ----YPFATEVMDVADAAQVAQVCQRLLAETERLDALVN   80 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSC----CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhc----CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46799999999999999999999999999999999875311    237889999999999888876       6899999


Q ss_pred             cCCc-------------h-------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHHHH
Q 022625          170 PSEG-------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQD  217 (294)
Q Consensus       170 ~~~~-------------~-------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~a  217 (294)
                      +++.             +             +.+    .+++.+..+||++||..++.+......|..+|..  .+.+..
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  160 (250)
T 2fwm_X           81 AAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSV  160 (250)
T ss_dssp             CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHHHHHHH
Confidence            8320             0             111    2345678899999999887766555566544432  122223


Q ss_pred             HHHHHhCCCCEEEEEccceecCCCCCc----c--e-eecc-------CCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          218 ESMLMASGIPYTIIRTGVLQNTPGGKQ----G--F-QFEE-------GCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       218 e~~l~~~gl~~tivRPg~l~~~~~~~~----~--~-~~~~-------g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                      ...+...|+++++|+||.+........    .  . .+..       ......+.+++|+|+++++++..+.  ..|+.+
T Consensus       161 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i  240 (250)
T 2fwm_X          161 GLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDI  240 (250)
T ss_dssp             HHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCEE
Confidence            333445799999999998763211100    0  0 1100       1122346789999999999997643  478999


Q ss_pred             EEecCC
Q 022625          282 EVCEIS  287 (294)
Q Consensus       282 ~v~~g~  287 (294)
                      .+.+|.
T Consensus       241 ~vdGG~  246 (250)
T 2fwm_X          241 VVDGGS  246 (250)
T ss_dssp             EESTTT
T ss_pred             EECCCc
Confidence            998874

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.80  E-value=1e-18  Score=155.81  Aligned_cols=194  Identities=15%  Similarity=0.069  Sum_probs=133.4

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCHHHHHHHhc----
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      ...+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+.       .+..+.++.+|++|.++++++++    
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   95 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3556789999999999999999999999999999999997654321       24467889999999998887775    


Q ss_pred             ---CCcEEEEcCC-----ch-------------------------HHhhhhhcCCCEEEEecccc-cccCCCCchhccch
Q 022625          163 ---GVRSIICPSE-----GF-------------------------ISNAGSLKGVQHVILLSQLS-VYRGSGGIQALMKG  208 (294)
Q Consensus       163 ---~~d~Vi~~~~-----~~-------------------------~~~~~~~~gv~r~V~vSs~~-~~~~~~~~~~~~~~  208 (294)
                         ++|++||+++     .+                         +...+++.+.++||++||.. ...+......|..+
T Consensus        96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  175 (267)
T 1vl8_A           96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAAS  175 (267)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHH
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHH
Confidence               6899999832     00                         11123456778999999987 55444444555444


Q ss_pred             hHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCC----cce--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       209 ~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----~~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      |..  .+.+.....+...|+++++|+||++.......    ...  .+........+.+++|+|+++++++..+.  ..|
T Consensus       176 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~itG  255 (267)
T 1vl8_A          176 KGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTG  255 (267)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCcC
Confidence            431  12222333344579999999999986322110    000  01111222456899999999999987643  468


Q ss_pred             cEEEEecCC
Q 022625          279 LIFEVCEIS  287 (294)
Q Consensus       279 ~~~~v~~g~  287 (294)
                      +.+.+.+|-
T Consensus       256 ~~i~vdGG~  264 (267)
T 1vl8_A          256 QIIFVDGGW  264 (267)
T ss_dssp             CEEEESTTG
T ss_pred             CeEEECCCC
Confidence            999998773

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.80  E-value=1.5e-18  Score=156.73  Aligned_cols=193  Identities=10%  Similarity=0.111  Sum_probs=132.1

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCHHHHHHHhcC----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRG----  163 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l~~----  163 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|++++|+.++..+.       .+..+.++.+|++|.++++++++.    
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999998654322       145689999999999988877754    


Q ss_pred             ---CcEEEEcCCc-----h---------------------HHh----hhh-hcCCCEEEEecccccccCCCCchhccchh
Q 022625          164 ---VRSIICPSEG-----F---------------------ISN----AGS-LKGVQHVILLSQLSVYRGSGGIQALMKGN  209 (294)
Q Consensus       164 ---~d~Vi~~~~~-----~---------------------~~~----~~~-~~gv~r~V~vSs~~~~~~~~~~~~~~~~~  209 (294)
                         +|+|||+++.     +                     +..    .+. +.+..+||++||..++.+..+...|..+|
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  181 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAK  181 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHH
Confidence               4999998321     0                     111    122 34568999999988776655555564444


Q ss_pred             HHH--HHHHHHHHHHhCCCCEEEEEccceecC-CCCC---cce---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNT-PGGK---QGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       210 ~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~-~~~~---~~~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      ...  +.+.....+...|+++++||||.+... ....   ...   .+........+.+++|+|+++++++..+.  ..|
T Consensus       182 ~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~~~G  261 (302)
T 1w6u_A          182 AGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWING  261 (302)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcccccCC
Confidence            321  112222223447999999999998632 1110   000   11122233456799999999999887543  368


Q ss_pred             cEEEEecCC
Q 022625          279 LIFEVCEIS  287 (294)
Q Consensus       279 ~~~~v~~g~  287 (294)
                      ++|++.+|.
T Consensus       262 ~~~~v~gg~  270 (302)
T 1w6u_A          262 AVIKFDGGE  270 (302)
T ss_dssp             CEEEESTTH
T ss_pred             CEEEECCCe
Confidence            999998884

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.80  E-value=1.4e-18  Score=154.58  Aligned_cols=194  Identities=15%  Similarity=0.092  Sum_probs=135.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------C-CCcEEeecCCCCHHHHHHHhc-----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------G-TYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~-~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+..      + ..+.++.+|++|.++++++++     
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999987644321      1 468899999999998887775     


Q ss_pred             --CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccc-cCCCCchhccchh
Q 022625          163 --GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVY-RGSGGIQALMKGN  209 (294)
Q Consensus       163 --~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~-~~~~~~~~~~~~~  209 (294)
                        ++|++||+++.     +                         +...+++.+..+||++||..+. .+......|..+|
T Consensus        86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  165 (262)
T 3pk0_A           86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATK  165 (262)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHH
Confidence              78999998320     0                         1122344577899999998764 4444455564444


Q ss_pred             HH--HHHHHHHHHHHhCCCCEEEEEccceecCCC--CCc--ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          210 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPG--GKQ--GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       210 ~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~--~~~--~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                      ..  .+.+.....+...|+++++|+||.+.....  ...  ...+........+.+++|+|+++++++..+.  ..|+++
T Consensus       166 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i  245 (262)
T 3pk0_A          166 AAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAI  245 (262)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEE
Confidence            31  122223333445799999999998762110  000  0011122233456789999999999887654  579999


Q ss_pred             EEecCCc
Q 022625          282 EVCEISN  288 (294)
Q Consensus       282 ~v~~g~~  288 (294)
                      ++.+|..
T Consensus       246 ~vdGG~~  252 (262)
T 3pk0_A          246 AVDGGQV  252 (262)
T ss_dssp             EESTTTT
T ss_pred             EECCCee
Confidence            9988854

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.80  E-value=8.1e-19  Score=155.60  Aligned_cols=193  Identities=15%  Similarity=0.065  Sum_probs=121.5

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHh-------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------  161 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l-------  161 (294)
                      ..+.+|+|+||||+|+||++++++|+++|++|+++.|++++..+.      .+..++++.+|++|.+++++++       
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            345689999999999999999999999999999999997654332      1346888999999998888776       


Q ss_pred             -cCCcEEEEcCCc-------------h-------------HHhh----hhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          162 -RGVRSIICPSEG-------------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       162 -~~~d~Vi~~~~~-------------~-------------~~~~----~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                       .++|+|||+++.             +             +.++    +++.+.++||++||..++.+......|..+|.
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  169 (266)
T 1xq1_A           90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKG  169 (266)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHH
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHHH
Confidence             468999998321             0             1122    24567899999999887665444445544433


Q ss_pred             HH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCc--c---eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--G---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       211 ~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~--~---~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                      ..  +.+.....+...|+++++||||.+........  .   ..+........+++++|+|+++++++..+.  ..|+.|
T Consensus       170 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  249 (266)
T 1xq1_A          170 ALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTI  249 (266)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEE
Confidence            11  12222223344699999999999873221110  0   001111122346789999999999887543  468999


Q ss_pred             EEecCC
Q 022625          282 EVCEIS  287 (294)
Q Consensus       282 ~v~~g~  287 (294)
                      ++.+|.
T Consensus       250 ~v~gG~  255 (266)
T 1xq1_A          250 CVDGGL  255 (266)
T ss_dssp             ECCCCE
T ss_pred             EEcCCc
Confidence            998874

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.80  E-value=3.5e-18  Score=152.66  Aligned_cols=191  Identities=12%  Similarity=0.017  Sum_probs=137.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.   .+..+.++.+|++|.++++++++       .+|
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   87 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLD   87 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            45689999999999999999999999999999999998765433   34578899999999999888776       789


Q ss_pred             EEEEcCC---c----h---------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          166 SIICPSE---G----F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       166 ~Vi~~~~---~----~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      ++||+++   .    +                     +.+    .+++.+..+||++||..++.+......|..+|..  
T Consensus        88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  167 (271)
T 3tzq_B           88 IVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIE  167 (271)
T ss_dssp             EEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHHH
Confidence            9999822   0    0                     111    2355677899999999888776666666555432  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCC-Ccc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGG-KQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~-~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                      .+.+.....+...|+++++|+||.+...... ...    ..+........+.+++|+|+++++++....  ..|+++++.
T Consensus       168 ~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vd  247 (271)
T 3tzq_B          168 TLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAAD  247 (271)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEEC
Confidence            1222333334457999999999998732211 000    011122233456789999999999987654  479999998


Q ss_pred             cC
Q 022625          285 EI  286 (294)
Q Consensus       285 ~g  286 (294)
                      +|
T Consensus       248 GG  249 (271)
T 3tzq_B          248 SG  249 (271)
T ss_dssp             TT
T ss_pred             CC
Confidence            88

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.80  E-value=1.5e-18  Score=153.60  Aligned_cols=190  Identities=14%  Similarity=0.046  Sum_probs=130.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHHhc-------CCcEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRSI  167 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~-------~~d~V  167 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|++++ .+...  .. .++.+|++|.++++++++       .+|++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   81 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVL   81 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            467999999999999999999999999999999998765 32211  13 788999999988887765       67999


Q ss_pred             EEcCC----c-h---------------------H----HhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HHH
Q 022625          168 ICPSE----G-F---------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAE  215 (294)
Q Consensus       168 i~~~~----~-~---------------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~  215 (294)
                      ||+++    + +                     +    ...+++.+.++||++||..+..+......|..+|...  +.+
T Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  161 (256)
T 2d1y_A           82 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTR  161 (256)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHHHHH
Confidence            99832    0 0                     1    1123445778999999988776655555665444321  222


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCC---------CCc-ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPG---------GKQ-GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~---------~~~-~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                      .....+...|+++++|+||.+.....         ... ...+........+++++|+|+++++++..+.  ..|+.|++
T Consensus       162 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v  241 (256)
T 2d1y_A          162 SLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPV  241 (256)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEE
Confidence            22233445799999999998752110         000 0011122233457899999999999987653  46899999


Q ss_pred             ecCCc
Q 022625          284 CEISN  288 (294)
Q Consensus       284 ~~g~~  288 (294)
                      .+|..
T Consensus       242 ~gG~~  246 (256)
T 2d1y_A          242 DGGMT  246 (256)
T ss_dssp             STTGG
T ss_pred             CCCcc
Confidence            88853

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.80  E-value=7.4e-19  Score=155.69  Aligned_cols=177  Identities=17%  Similarity=0.057  Sum_probs=125.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcC--CcEEEEcCCc----
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG----  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~~~~~----  173 (294)
                      |+|+||||+|+||++++++|+ +|++|++++|++...     .+   +.+|++|.+++.+++++  +|+|||+++.    
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~   71 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-----GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVD   71 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-----TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-----CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccChh
Confidence            579999999999999999999 589999999987431     22   78999999999999986  8999998321    


Q ss_pred             ------------------hHHhhhhhcCCCEEEEecccccccCCCCc-h---hccc-hhHHHHHHHHHHHHHhCCCCEEE
Q 022625          174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-Q---ALMK-GNARKLAEQDESMLMASGIPYTI  230 (294)
Q Consensus       174 ------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~-~---~~~~-~~~~~~~~~ae~~l~~~gl~~ti  230 (294)
                                        .+.+++.+.++ |||++||..++.+.... .   +..+ ..+...|..+|.+++.  +++++
T Consensus        72 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~--~~~~~  148 (273)
T 2ggs_A           72 KCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ--DDSLI  148 (273)
T ss_dssp             HHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC--TTCEE
T ss_pred             hhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC--CCeEE
Confidence                              13445666776 99999999887543210 0   0001 1122235567777776  89999


Q ss_pred             EEccceecCCCC-----------CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCcccccc
Q 022625          231 IRTGVLQNTPGG-----------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       231 vRPg~l~~~~~~-----------~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~~~~ei  293 (294)
                      |||+.++ ++..           +..... .+. ...+++++|+|++++.+++++.  +++|++.+...++.|+
T Consensus       149 iR~~~v~-G~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~~~~s~~e~  217 (273)
T 2ggs_A          149 IRTSGIF-RNKGFPIYVYKTLKEGKTVFA-FKG-YYSPISARKLASAILELLELRK--TGIIHVAGERISRFEL  217 (273)
T ss_dssp             EEECCCB-SSSSHHHHHHHHHHTTCCEEE-ESC-EECCCBHHHHHHHHHHHHHHTC--CEEEECCCCCEEHHHH
T ss_pred             Eeccccc-cccHHHHHHHHHHHcCCCEEe-ecC-CCCceEHHHHHHHHHHHHhcCc--CCeEEECCCcccHHHH
Confidence            9999988 3221           111111 122 5678999999999999998753  4599998844455553

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.80  E-value=1.1e-18  Score=152.74  Aligned_cols=191  Identities=12%  Similarity=0.101  Sum_probs=124.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~-~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|+|+||||+|+||++++++|+++|++|+++ .|++++..+.      .+..+.++.+|++|.++++++++       
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            457999999999999999999999999999998 5666543321      23468899999999999888776       


Q ss_pred             CCcEEEEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH
Q 022625          163 GVRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK  212 (294)
Q Consensus       163 ~~d~Vi~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~  212 (294)
                      ++|+|||+++.             +                 +...+++.+.++||++||..+..+......|..+|...
T Consensus        83 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  162 (247)
T 2hq1_A           83 RIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGL  162 (247)
T ss_dssp             CCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHHH
Confidence            78999998320             0                 11123456788999999986654444444554443211


Q ss_pred             --HHHHHHHHHHhCCCCEEEEEccceecCCCCC-cc---eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          213 --LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QG---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       213 --~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-~~---~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                        +.+.....+...++++++++||.+....... ..   ..+..+.....+++++|+|++++.++..+.  ..|++|++.
T Consensus       163 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  242 (247)
T 2hq1_A          163 IGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVINID  242 (247)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccccccCcEEEeC
Confidence              1222222334468999999999876221100 00   011122333557899999999999887643  468999998


Q ss_pred             cCC
Q 022625          285 EIS  287 (294)
Q Consensus       285 ~g~  287 (294)
                      +|.
T Consensus       243 gG~  245 (247)
T 2hq1_A          243 GGL  245 (247)
T ss_dssp             TTC
T ss_pred             CCc
Confidence            874

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.80  E-value=2.3e-18  Score=151.94  Aligned_cols=194  Identities=15%  Similarity=0.087  Sum_probs=131.1

Q ss_pred             CCCCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCC-CHHHHHHHhcCCcEEEEc
Q 022625           92 DEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-NKKFLKTALRGVRSIICP  170 (294)
Q Consensus        92 ~~~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~-d~~~l~~~l~~~d~Vi~~  170 (294)
                      +......+|+++||||+|+||++++++|+++|++|+++.|+++...+. + .+.++ +|+. +.+.+.+.+.++|++||+
T Consensus        12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~-~~~~~-~D~~~~~~~~~~~~~~iD~lv~~   88 (249)
T 1o5i_A           12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-G-HRYVV-CDLRKDLDLLFEKVKEVDILVLN   88 (249)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-C-SEEEE-CCTTTCHHHHHHHSCCCSEEEEC
T ss_pred             hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh-C-CeEEE-eeHHHHHHHHHHHhcCCCEEEEC
Confidence            345677899999999999999999999999999999999998554433 2 46667 9993 344454555588999998


Q ss_pred             CC----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHHHHH
Q 022625          171 SE----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDE  218 (294)
Q Consensus       171 ~~----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~ae  218 (294)
                      ++    + +                         +.+.+++.+.++||++||..++.+......|..+|..  .+.+...
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la  168 (249)
T 1o5i_A           89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLS  168 (249)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHHHH
Confidence            32    0 0                         1223456678899999999888766555566544431  1222333


Q ss_pred             HHHHhCCCCEEEEEccceecCCCC---Ccc-e-eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          219 SMLMASGIPYTIIRTGVLQNTPGG---KQG-F-QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       219 ~~l~~~gl~~tivRPg~l~~~~~~---~~~-~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      ..+...|+++++|+||.+......   ... . .+........+.+++|+|+++++++..+.  ..|+.|++.+|..
T Consensus       169 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          169 FEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLS  245 (249)
T ss_dssp             HHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            334557999999999998732110   000 0 11112223456799999999999887643  4689999988854

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.80  E-value=2.3e-18  Score=154.59  Aligned_cols=196  Identities=14%  Similarity=0.099  Sum_probs=139.9

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.   .+..+.++.+|++|.++++++++       .+
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRV  102 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            456789999999999999999999999999999999998765433   34578899999999998887775       67


Q ss_pred             cEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--H
Q 022625          165 RSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K  212 (294)
Q Consensus       165 d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~  212 (294)
                      |++||+++.     +                         +...+++.+..+||++||..++.+......|..+|..  .
T Consensus       103 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  182 (277)
T 4dqx_A          103 DVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISS  182 (277)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHH
Confidence            999998320     0                         1122345567799999999888776666666555432  1


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCC-C-----CCcc-ee---eccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTP-G-----GKQG-FQ---FEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~-~-----~~~~-~~---~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      +.+.....+...|+++++|+||.+.... .     .... ..   +........+.+++|+|+++++++....  ..|++
T Consensus       183 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~~itG~~  262 (277)
T 4dqx_A          183 LTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSI  262 (277)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCccCCCcCCE
Confidence            2223333344579999999999876211 0     0000 00   2223333456789999999999987654  47999


Q ss_pred             EEEecCCccc
Q 022625          281 FEVCEISNLC  290 (294)
Q Consensus       281 ~~v~~g~~~~  290 (294)
                      +++.+|....
T Consensus       263 i~vdGG~~~~  272 (277)
T 4dqx_A          263 LTVDGGSSIG  272 (277)
T ss_dssp             EEESSSSSSC
T ss_pred             EEECCchhhh
Confidence            9998886543

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.80  E-value=2.2e-18  Score=151.70  Aligned_cols=190  Identities=15%  Similarity=0.101  Sum_probs=131.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHHhc-------CCcEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR-------GVRSII  168 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi  168 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+++++.+... .+++++.+|++|.++++++++       .+|++|
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   82 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            457999999999999999999999999999999999876544321 147889999999998887765       479999


Q ss_pred             EcCC----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHHH
Q 022625          169 CPSE----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ  216 (294)
Q Consensus       169 ~~~~----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~  216 (294)
                      |+++    + +                         +...+++.+.++||++||.. ..+......|..+|..  .+.+.
T Consensus        83 n~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~~~~  161 (245)
T 1uls_A           83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRT  161 (245)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHHHHHHHH
Confidence            9832    0 0                         11223445678999999988 5444444455444431  12233


Q ss_pred             HHHHHHhCCCCEEEEEccceecCCCCCcce----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          217 DESMLMASGIPYTIIRTGVLQNTPGGKQGF----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       217 ae~~l~~~gl~~tivRPg~l~~~~~~~~~~----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      ....+...|+++++|+||++..........    .+........+.+++|+|+++++++..+.  ..|+.+.+.+|.
T Consensus       162 la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  238 (245)
T 1uls_A          162 LALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGR  238 (245)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence            334455679999999999986332211000    00011122346899999999999987643  468999998774

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.80  E-value=2.6e-18  Score=153.56  Aligned_cols=192  Identities=13%  Similarity=0.086  Sum_probs=132.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHh--------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL--------  161 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l--------  161 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+.      .+..+.++.+|++|.+++++++        
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   97 (273)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35689999999999999999999999999999999998654332      1346888999999998888776        


Q ss_pred             cCCcEEEEcCCc-------------h-------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          162 RGVRSIICPSEG-------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       162 ~~~d~Vi~~~~~-------------~-------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      ..+|++||+++.             +             +.+    .+++.+..+||++||..++.+......|..+|..
T Consensus        98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  177 (273)
T 1ae1_A           98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGA  177 (273)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHH
Confidence            468999998321             0             111    2345567899999999887766555566554431


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce----------eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF----------QFEEGCAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~----------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                        .+.+.....+...|+++++|+||.+..........          .+........+.+++|+|+++++++..+.  ..
T Consensus       178 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~t  257 (273)
T 1ae1_A          178 INQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYIT  257 (273)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcC
Confidence              12222333344579999999999876322111000          00001122346799999999999886543  46


Q ss_pred             CcEEEEecCC
Q 022625          278 GLIFEVCEIS  287 (294)
Q Consensus       278 g~~~~v~~g~  287 (294)
                      |+++++.+|.
T Consensus       258 G~~i~vdGG~  267 (273)
T 1ae1_A          258 GQIIWADGGF  267 (273)
T ss_dssp             SCEEEESTTG
T ss_pred             CCEEEECCCc
Confidence            8999998874

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.80  E-value=1.3e-18  Score=154.29  Aligned_cols=193  Identities=14%  Similarity=0.037  Sum_probs=133.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHh--------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL--------  161 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l--------  161 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+.      .+..+.++.+|++|.+++++++        
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   85 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35689999999999999999999999999999999998764332      1346788999999998888777        


Q ss_pred             cCCcEEEEcCCc-----h---------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          162 RGVRSIICPSEG-----F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       162 ~~~d~Vi~~~~~-----~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      ..+|++||+++.     +                     +.+    .+++.+.++||++||..++.+......|..+|..
T Consensus        86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  165 (260)
T 2ae2_A           86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGA  165 (260)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHHH
Confidence            468999998320     0                     111    2345677899999998877665555556444431


Q ss_pred             H--HHHHHHHHHHhCCCCEEEEEccceecCCC----CCcc--e---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQG--F---QFEEGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       212 ~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~----~~~~--~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      .  +.+.....+...|+++++|+||.+.....    ....  .   .+........+.+++|+|+++++++..+.  ..|
T Consensus       166 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG  245 (260)
T 2ae2_A          166 MDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTG  245 (260)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCCC
Confidence            1  11222222334689999999998762110    0000  0   11112233457899999999999887543  468


Q ss_pred             cEEEEecCCc
Q 022625          279 LIFEVCEISN  288 (294)
Q Consensus       279 ~~~~v~~g~~  288 (294)
                      +++++.+|..
T Consensus       246 ~~~~vdgG~~  255 (260)
T 2ae2_A          246 QIIYVDGGLM  255 (260)
T ss_dssp             CEEEESTTGG
T ss_pred             CEEEECCCcc
Confidence            9999988753

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.80  E-value=9.3e-19  Score=155.44  Aligned_cols=192  Identities=14%  Similarity=0.088  Sum_probs=129.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-Cccchhhh------cCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R-~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ..+.+|+|+||||+|+||++++++|+++|++|+++.| ++++..+.      .+..+.++.+|++|.++++++++     
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999 55443221      23468889999999999888876     


Q ss_pred             --CCcEEEEcCCc-----h---------------------HHhhhhh---cCCCEEEEecccccc-cCCCCchhccchhH
Q 022625          163 --GVRSIICPSEG-----F---------------------ISNAGSL---KGVQHVILLSQLSVY-RGSGGIQALMKGNA  210 (294)
Q Consensus       163 --~~d~Vi~~~~~-----~---------------------~~~~~~~---~gv~r~V~vSs~~~~-~~~~~~~~~~~~~~  210 (294)
                        ++|+|||+++.     +                     +.+++..   .+ ++||++||..++ .+......|..+|.
T Consensus        97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~Y~~sK~  175 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPNHALYAGSKA  175 (274)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCCSCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCCCCchHHHHHH
Confidence              78999998320     0                     1111111   24 799999998876 54444445544433


Q ss_pred             HH--HHHHHHHHHHhCCCCEEEEEccceecCCCC------------Ccc-----eeeccCCCCCCCcCHHHHHHHHHHHh
Q 022625          211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGG------------KQG-----FQFEEGCAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       211 ~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~------------~~~-----~~~~~g~~~~~~Is~eDvA~~iv~aL  271 (294)
                      ..  +.+.....+...++++++||||.+......            ...     ..+..+.....+++++|+|+++++++
T Consensus       176 a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  255 (274)
T 1ja9_A          176 AVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALC  255 (274)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHh
Confidence            11  111122223346999999999987621100            000     01112333456789999999999999


Q ss_pred             hCCC--CCCcEEEEecCC
Q 022625          272 ESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       272 ~~~~--~~g~~~~v~~g~  287 (294)
                      .++.  ..|++|++.+|.
T Consensus       256 ~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          256 QEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             SGGGTTCCSCEEEESTTC
T ss_pred             CcccccccCcEEEecCCc
Confidence            7643  368999998873

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.80  E-value=8.6e-19  Score=154.65  Aligned_cols=194  Identities=13%  Similarity=0.109  Sum_probs=138.1

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+.   .......+.+|++|.++++++++       ++
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            346789999999999999999999999999999999998765432   23457889999999998888776       78


Q ss_pred             cEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--H
Q 022625          165 RSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K  212 (294)
Q Consensus       165 d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~  212 (294)
                      |++||+++.     +                         +...+++.+..+||++||..+..+..+...|..+|..  .
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  164 (248)
T 3op4_A           85 DILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIG  164 (248)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHH
Confidence            999998320     0                         1112344667899999998887766666666555431  1


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      +.+.....+...|++++.|+||.+.........    ..+........+.+++|+|+++++++....  ..|+++++.+|
T Consensus       165 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG  244 (248)
T 3op4_A          165 FTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGG  244 (248)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence            223333334557999999999998733221110    011122333557799999999999887543  46999999888


Q ss_pred             Cc
Q 022625          287 SN  288 (294)
Q Consensus       287 ~~  288 (294)
                      -.
T Consensus       245 ~~  246 (248)
T 3op4_A          245 MY  246 (248)
T ss_dssp             SS
T ss_pred             ee
Confidence            54

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.80  E-value=1.4e-18  Score=155.00  Aligned_cols=194  Identities=14%  Similarity=0.116  Sum_probs=133.3

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.   .+..+.++.+|++|.++++++++       ++
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGI  102 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            456789999999999999999999999999999999998765443   34578999999999998887775       68


Q ss_pred             cEEEEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--H
Q 022625          165 RSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K  212 (294)
Q Consensus       165 d~Vi~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~  212 (294)
                      |++||+++.             +                 +...+++.+..+||++||..+..+......|..+|..  .
T Consensus       103 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~  182 (266)
T 3grp_A          103 DILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIG  182 (266)
T ss_dssp             CEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHH
Confidence            999998321             0                 1122445677899999998887666555566554431  1


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCC----CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~----~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      +.+.....+...|+++++|+||.+.....    ......+........+.+++|+|+++++++....  ..|+++++.+|
T Consensus       183 ~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 3grp_A          183 FSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGG  262 (266)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            22233333445799999999998763110    0000111223334556789999999999887654  47999999887


Q ss_pred             Cc
Q 022625          287 SN  288 (294)
Q Consensus       287 ~~  288 (294)
                      -.
T Consensus       263 ~~  264 (266)
T 3grp_A          263 MA  264 (266)
T ss_dssp             C-
T ss_pred             ee
Confidence            54

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.80  E-value=2.9e-18  Score=153.71  Aligned_cols=194  Identities=12%  Similarity=0.107  Sum_probs=134.9

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc------------chhh------hcCCCcEEeecCCCCHHH
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR------------NAME------SFGTYVESMAGDASNKKF  156 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~------------~~~~------~~~~~v~~v~~D~~d~~~  156 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|++.            .+.+      ..+..+.++.+|++|.++
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   85 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA   85 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            3467899999999999999999999999999999999732            1111      123578899999999998


Q ss_pred             HHHHhc-------CCcEEEEcCCc-------------h-------------H----HhhhhhcCCCEEEEecccccccCC
Q 022625          157 LKTALR-------GVRSIICPSEG-------------F-------------I----SNAGSLKGVQHVILLSQLSVYRGS  199 (294)
Q Consensus       157 l~~~l~-------~~d~Vi~~~~~-------------~-------------~----~~~~~~~gv~r~V~vSs~~~~~~~  199 (294)
                      ++++++       ++|++||+++.             +             +    ...+++.+..+||++||..++.+.
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  165 (281)
T 3s55_A           86 LESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSAN  165 (281)
T ss_dssp             HHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCC
Confidence            888775       78999998220             0             1    112445667899999999888776


Q ss_pred             CCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc----ce-------e--------eccCCCCCCCc
Q 022625          200 GGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GF-------Q--------FEEGCAANGSL  258 (294)
Q Consensus       200 ~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~~-------~--------~~~g~~~~~~I  258 (294)
                      .....|..+|..  .+.+.....+...|+++++|+||.+........    ..       .        ...+.....+.
T Consensus       166 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (281)
T 3s55_A          166 FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFL  245 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSCB
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCCC
Confidence            666666554431  122222233344799999999999873221110    00       0        01122235678


Q ss_pred             CHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          259 SKEDAAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       259 s~eDvA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      +++|+|+++++++.++.  ..|+++++.+|..
T Consensus       246 ~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~  277 (281)
T 3s55_A          246 KPEEVTRAVLFLVDEASSHITGTVLPIDAGAT  277 (281)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CHHHHHHHHHHHcCCcccCCCCCEEEECCCcc
Confidence            99999999999997654  4699999988853

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.80  E-value=1.8e-18  Score=152.91  Aligned_cols=189  Identities=16%  Similarity=0.116  Sum_probs=131.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      +|+++||||+|+||++++++|+++|++|+++.|+++++.+.      .+..+.++.+|++|.++++++++       ++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999999998654332      13468889999999999888776       789


Q ss_pred             EEEEcCC-----ch-------------------------HHhhhhhcC-CCEEEEecccccccCCCCchhccchhHH--H
Q 022625          166 SIICPSE-----GF-------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--K  212 (294)
Q Consensus       166 ~Vi~~~~-----~~-------------------------~~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~--~  212 (294)
                      ++||+++     .+                         +...+++.+ ..+||++||..+..+......|..+|..  .
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  161 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG  161 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHHH
Confidence            9999832     00                         112234445 6899999998877655555556544431  1


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCC--------------Ccc-eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGG--------------KQG-FQFEEGCAANGSLSKEDAAFICVEALESIP--  275 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~--------------~~~-~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--  275 (294)
                      +.+.....+...|+++++|+||++......              ... ..+........+.+++|+|+++++++..+.  
T Consensus       162 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~  241 (256)
T 1geg_A          162 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY  241 (256)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            222333334457999999999987621100              000 001111222347899999999999987653  


Q ss_pred             CCCcEEEEecCC
Q 022625          276 QTGLIFEVCEIS  287 (294)
Q Consensus       276 ~~g~~~~v~~g~  287 (294)
                      ..|+.+.+.+|.
T Consensus       242 ~tG~~i~vdGG~  253 (256)
T 1geg_A          242 MTGQSLLIDGGM  253 (256)
T ss_dssp             CCSCEEEESSSS
T ss_pred             CCCCEEEeCCCc
Confidence            478999998874

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.80  E-value=1.2e-18  Score=153.23  Aligned_cols=193  Identities=12%  Similarity=0.104  Sum_probs=131.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCc-EEeecCCCCHHHHHHHh------cCCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYV-ESMAGDASNKKFLKTAL------RGVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v-~~v~~D~~d~~~l~~~l------~~~d  165 (294)
                      .+.+|+++||||+|+||++++++|+++|++|++++|++++..+.   .+..+ .++.+|++|.+++++++      .++|
T Consensus         8 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id   87 (254)
T 2wsb_A            8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVS   87 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCc
Confidence            45689999999999999999999999999999999998764432   12345 88999999999888776      4689


Q ss_pred             EEEEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCc--hhccchhHHH-
Q 022625          166 SIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGI--QALMKGNARK-  212 (294)
Q Consensus       166 ~Vi~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~--~~~~~~~~~~-  212 (294)
                      +|||+++.             +                 +.+.+++.+.++||++||..++.+....  ..|..+|... 
T Consensus        88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~  167 (254)
T 2wsb_A           88 ILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVH  167 (254)
T ss_dssp             EEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHHHHHHH
T ss_pred             EEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHHHHHHH
Confidence            99998320             0                 1122445678999999998876544333  4454433211 


Q ss_pred             -HHHHHHHHHHhCCCCEEEEEccceecCCCC----Ccc--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       213 -~~~~ae~~l~~~gl~~tivRPg~l~~~~~~----~~~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                       +.+.....+...|+++++||||.+......    ...  ..+........+.+++|+|+++++++..+.  ..|+.+++
T Consensus       168 ~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  247 (254)
T 2wsb_A          168 QLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGAILAV  247 (254)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccccccCCEEEE
Confidence             112222223446999999999998622110    000  001112223457899999999999987543  46899999


Q ss_pred             ecCCc
Q 022625          284 CEISN  288 (294)
Q Consensus       284 ~~g~~  288 (294)
                      .+|-.
T Consensus       248 ~gG~~  252 (254)
T 2wsb_A          248 DGGYT  252 (254)
T ss_dssp             STTGG
T ss_pred             CCCEe
Confidence            88743

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.80  E-value=1.9e-18  Score=150.31  Aligned_cols=171  Identities=18%  Similarity=0.132  Sum_probs=117.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHHhc-------CCcEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRSII  168 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi  168 (294)
                      .+|+|+||||+|+||++++++|+++|++|+++.|++++..+...  .+++++.+|++|.++++++++       ++|+||
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            46899999999999999999999999999999999876543221  268899999999988877765       679999


Q ss_pred             EcCC-----ch-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHHH
Q 022625          169 CPSE-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ  216 (294)
Q Consensus       169 ~~~~-----~~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~  216 (294)
                      |+.+     .+                         +.+.+++.+.++||++||..++.+..+...|..+|..  .+.+.
T Consensus        84 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  163 (234)
T 2ehd_A           84 NNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGA  163 (234)
T ss_dssp             ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHHHHHH
Confidence            9832     00                         1223455678999999999887665555556444431  12222


Q ss_pred             HHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          217 DESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       217 ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      ....+...|+++++||||++........    ..  . ..+++++|+|+++++++.++.
T Consensus       164 la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~--~-~~~~~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          164 AMLDLREANVRVVNVLPGSVDTGFAGNT----PG--Q-AWKLKPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             HHHHHGGGTEEEEEEECC-----------------------CCHHHHHHHHHHHHHSCC
T ss_pred             HHHHHhhcCcEEEEEEeCCCcCCccccc----cc--c-cCCCCHHHHHHHHHHHhCCCc
Confidence            2333455799999999998763221111    00  0 125899999999999998765

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.79  E-value=9.4e-19  Score=156.83  Aligned_cols=193  Identities=11%  Similarity=0.121  Sum_probs=133.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+.      .+..+.++.+|++|.++++++++       
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999999998654332      13468889999999998887775       


Q ss_pred             CCcEEEEcCC----c-h---------------------HHhh------hhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 GVRSIICPSE----G-F---------------------ISNA------GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 ~~d~Vi~~~~----~-~---------------------~~~~------~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                      ++|+|||+++    + +                     +.++      +++.+.++||++||..+..+......|..+|.
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  178 (277)
T 2rhc_B           99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKH  178 (277)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHHH
Confidence            6899999832    1 0                     1112      33346689999999987765555555644443


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCCCC-------------cc--eeeccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-------------QG--FQFEEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-------------~~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                      .  .+.+.....+...|+++++|+||.+.......             ..  ..+........+++++|+|+++++++..
T Consensus       179 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~  258 (277)
T 2rhc_B          179 GVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGP  258 (277)
T ss_dssp             HHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence            1  12222223344578999999999876221000             00  0011112234578999999999999876


Q ss_pred             CC--CCCcEEEEecCCc
Q 022625          274 IP--QTGLIFEVCEISN  288 (294)
Q Consensus       274 ~~--~~g~~~~v~~g~~  288 (294)
                      +.  ..|++|++.+|..
T Consensus       259 ~~~~~tG~~~~vdGG~~  275 (277)
T 2rhc_B          259 GAAAVTAQALNVCGGLG  275 (277)
T ss_dssp             GGTTCCSCEEEESTTCC
T ss_pred             hhcCCCCcEEEECCCcc
Confidence            53  4789999988854

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.79  E-value=1.1e-18  Score=154.35  Aligned_cols=193  Identities=13%  Similarity=0.142  Sum_probs=133.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc------CCcEEEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIIC  169 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~------~~d~Vi~  169 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.++..+..+..++++.+|++|.++++++++      .+|++||
T Consensus         6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~   85 (257)
T 3tl3_A            6 EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVN   85 (257)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             eecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence            4568999999999999999999999999999999998776665566789999999999999888776      7899999


Q ss_pred             cCCc------------h------------------HHh----hhhh--------cCCCEEEEecccccccCCCCchhccc
Q 022625          170 PSEG------------F------------------ISN----AGSL--------KGVQHVILLSQLSVYRGSGGIQALMK  207 (294)
Q Consensus       170 ~~~~------------~------------------~~~----~~~~--------~gv~r~V~vSs~~~~~~~~~~~~~~~  207 (294)
                      +++.            .                  +.+    .+.+        .+-.+||++||..+..+......|..
T Consensus        86 nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  165 (257)
T 3tl3_A           86 CAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSA  165 (257)
T ss_dssp             CGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHHH
T ss_pred             CCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccHHH
Confidence            8321            0                  111    1222        34568999999988765555555544


Q ss_pred             hhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCC-CCCcCHHHHHHHHHHHhhCCCCCCcE
Q 022625          208 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAA-NGSLSKEDAAFICVEALESIPQTGLI  280 (294)
Q Consensus       208 ~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~-~~~Is~eDvA~~iv~aL~~~~~~g~~  280 (294)
                      +|..  .+.+.....+...|++++.|+||++.........    ..+...... ..+.+++|+|++++++++++...|++
T Consensus       166 sKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~s~~~itG~~  245 (257)
T 3tl3_A          166 SKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIENPMLNGEV  245 (257)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHHHHCTTCCSCE
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCCccCHHHHHHHHHHHhcCCCCCCCE
Confidence            4431  1223333334557999999999998633211100    001111222 45679999999999999987678999


Q ss_pred             EEEecCCc
Q 022625          281 FEVCEISN  288 (294)
Q Consensus       281 ~~v~~g~~  288 (294)
                      +.+.+|-.
T Consensus       246 i~vdGG~~  253 (257)
T 3tl3_A          246 IRLDGAIR  253 (257)
T ss_dssp             EEESTTC-
T ss_pred             EEECCCcc
Confidence            99988753

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.79  E-value=2.7e-18  Score=149.54  Aligned_cols=183  Identities=15%  Similarity=0.169  Sum_probs=128.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc------CCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~------~~d~Vi~~~~  172 (294)
                      +|+++||||+|+||++++++|+++|++|+++.|+++ .     ..++++.+|++|.++++++++      ++|++||+++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag   75 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   75 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----cceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence            589999999999999999999999999999999876 2     346889999999999998887      7899999721


Q ss_pred             -----------------ch-------------HHhh----hhhcC------CCEEEEecccccccCCCCchhccchhHH-
Q 022625          173 -----------------GF-------------ISNA----GSLKG------VQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       173 -----------------~~-------------~~~~----~~~~g------v~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                                       .+             +.++    +.+.+      ..+||++||..++.+..+...|..+|.. 
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  155 (242)
T 1uay_A           76 VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGV  155 (242)
T ss_dssp             CCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             ccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhHHHHHH
Confidence                             11             1111    12222      2399999999887665555566544432 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-c---eeeccCCCC-CCCcCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G---FQFEEGCAA-NGSLSKEDAAFICVEALESIPQTGLIFEVCE  285 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~---~~~~~g~~~-~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~  285 (294)
                       .+.+.....+...|+++++||||.+........ .   ..+...... ..+.+++|+|+++++++.++...|+.|++.+
T Consensus       156 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g  235 (242)
T 1uay_A          156 VALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENPMLNGEVVRLDG  235 (242)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcCCCCCCcEEEEcC
Confidence             122222333445699999999998763211000 0   001111222 4568999999999999988666799999988


Q ss_pred             CC
Q 022625          286 IS  287 (294)
Q Consensus       286 g~  287 (294)
                      |.
T Consensus       236 G~  237 (242)
T 1uay_A          236 AL  237 (242)
T ss_dssp             TC
T ss_pred             Ce
Confidence            75

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.79  E-value=5.8e-19  Score=155.26  Aligned_cols=192  Identities=14%  Similarity=0.124  Sum_probs=131.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-ccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~-~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|+|+||||+|+||++++++|+++|++|++++|+ +++..+.      .+..++++.+|++|.++++++++       
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999999998 6554322      13468899999999999988887       


Q ss_pred             CCcEEEEcCCc------h---------------------HHh----hhhhcC--C---CEEEEeccccccc-CCCCchhc
Q 022625          163 GVRSIICPSEG------F---------------------ISN----AGSLKG--V---QHVILLSQLSVYR-GSGGIQAL  205 (294)
Q Consensus       163 ~~d~Vi~~~~~------~---------------------~~~----~~~~~g--v---~r~V~vSs~~~~~-~~~~~~~~  205 (294)
                      ++|+|||+++.      +                     +.+    .+.+.+  .   .+||++||..++. +..+...|
T Consensus        85 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y  164 (258)
T 3afn_B           85 GIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLY  164 (258)
T ss_dssp             SCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHH
T ss_pred             CCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHH
Confidence            78999998331      0                     001    122222  2   7999999987765 44444555


Q ss_pred             cchhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCc-c---eeeccCCCCCCCcCHHHHHHHHHHHhhCC---CC
Q 022625          206 MKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G---FQFEEGCAANGSLSKEDAAFICVEALESI---PQ  276 (294)
Q Consensus       206 ~~~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~---~~~~~g~~~~~~Is~eDvA~~iv~aL~~~---~~  276 (294)
                      ..+|...  +.+.....+...|+++++||||.+........ .   ..+..+.....+++++|+|+++++++..+   ..
T Consensus       165 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  244 (258)
T 3afn_B          165 GAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLASGYI  244 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCcchhccc
Confidence            4443311  11122222334699999999999863221110 0   01112233346789999999999998754   23


Q ss_pred             CCcEEEEecCCc
Q 022625          277 TGLIFEVCEISN  288 (294)
Q Consensus       277 ~g~~~~v~~g~~  288 (294)
                      .|++|++.+|..
T Consensus       245 ~G~~~~v~gg~~  256 (258)
T 3afn_B          245 TGQVLDINGGQY  256 (258)
T ss_dssp             CSEEEEESTTSS
T ss_pred             cCCEEeECCCcc
Confidence            689999988764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.79  E-value=2.5e-18  Score=151.87  Aligned_cols=192  Identities=11%  Similarity=0.044  Sum_probs=131.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-Cccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R-~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|+|+||||+|+||++++++|+++|++|+++.| ++++..+.      .+..+.++.+|++|.+++.++++       
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999999999 66543321      13467889999999998888776       


Q ss_pred             CCcEEEEcCC----c-h-------------------------HHhhhhhcC-CCEEEEecccccccCCCCchhccchhHH
Q 022625          163 GVRSIICPSE----G-F-------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 ~~d~Vi~~~~----~-~-------------------------~~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      ++|+|||+++    + +                         +...+.+.+ ..+||++||..+..+..+...|..+|..
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  164 (261)
T 1gee_A           85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGG  164 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHHH
Confidence            7899999822    0 0                         111233445 6899999999887665555566444431


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCC----cc--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----~~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                        .+.+.....+...++++++||||.+.......    ..  ..+........+.+++|+|+++++++..+.  ..|+.+
T Consensus       165 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  244 (261)
T 1gee_A          165 MKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITL  244 (261)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEE
Confidence              11222222334469999999999986321100    00  001111222457899999999999987542  468999


Q ss_pred             EEecCCc
Q 022625          282 EVCEISN  288 (294)
Q Consensus       282 ~v~~g~~  288 (294)
                      ++.+|..
T Consensus       245 ~v~gg~~  251 (261)
T 1gee_A          245 FADGGMT  251 (261)
T ss_dssp             EESTTGG
T ss_pred             EEcCCcc
Confidence            9988753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.79  E-value=2.9e-18  Score=150.01  Aligned_cols=184  Identities=12%  Similarity=0.116  Sum_probs=128.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc---
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR---  162 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~---  162 (294)
                      +|+|+||||+|+||++++++|+++|+       +|+++.|++++.....      +..++++.+|++|.++++++++   
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            57999999999999999999999999       9999999876544321      3468899999999998888775   


Q ss_pred             ----CCcEEEEcCCc-------------h-------------H----HhhhhhcCCCEEEEecccccccCCCCchhccch
Q 022625          163 ----GVRSIICPSEG-------------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       163 ----~~d~Vi~~~~~-------------~-------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                          ++|+|||+++.             +             +    ...+++.+.++||++||..++.+..+...|..+
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  161 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS  161 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHHH
Confidence                68999998320             0             1    112344577899999999887765555566444


Q ss_pred             hHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCC--CCcEEEEe
Q 022625          209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ--TGLIFEVC  284 (294)
Q Consensus       209 ~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~--~g~~~~v~  284 (294)
                      |...  +.+.....+...|+++++||||.+........    .. .....+++++|+|+++++++..+..  .+.++...
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~-~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~  236 (244)
T 2bd0_A          162 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV----DD-EMQALMMMPEDIAAPVVQAYLQPSRTVVEEIILRP  236 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC----CS-TTGGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc----cc-cccccCCCHHHHHHHHHHHHhCCccccchheEEec
Confidence            4321  12222333445799999999999873221111    00 1123678999999999999987653  45555554


Q ss_pred             cCC
Q 022625          285 EIS  287 (294)
Q Consensus       285 ~g~  287 (294)
                      ++.
T Consensus       237 ~~~  239 (244)
T 2bd0_A          237 TSG  239 (244)
T ss_dssp             TTC
T ss_pred             ccc
Confidence            443

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.79  E-value=2.1e-18  Score=152.85  Aligned_cols=194  Identities=10%  Similarity=0.081  Sum_probs=137.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.      .+..+.++.+|++|.++++++++      
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF   87 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            456789999999999999999999999999999999998764432      23578899999999988887775      


Q ss_pred             -CCcEEEEcCCc------------h-------------H----HhhhhhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          163 -GVRSIICPSEG------------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       163 -~~d~Vi~~~~~------------~-------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                       .+|++||+++.            +             +    ...+++.+..+||++||..++.+......|..+|.. 
T Consensus        88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  167 (256)
T 3gaf_A           88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAV  167 (256)
T ss_dssp             SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHH
Confidence             78999998321            0             1    112345667899999999888776666666555432 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCC----C-CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPG----G-KQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~----~-~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                       .+.+.....+...|++++.|+||.+.....    . .....+........+.+++|+|+++++++....  ..|+++++
T Consensus       168 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~v  247 (256)
T 3gaf_A          168 NHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTV  247 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCccCCEEEE
Confidence             122223333445799999999998762210    0 000111122333556799999999999887543  46999999


Q ss_pred             ecCCc
Q 022625          284 CEISN  288 (294)
Q Consensus       284 ~~g~~  288 (294)
                      .+|..
T Consensus       248 dgG~~  252 (256)
T 3gaf_A          248 SGGGV  252 (256)
T ss_dssp             STTSC
T ss_pred             CCCcc
Confidence            88854

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.79  E-value=1.8e-18  Score=151.80  Aligned_cols=191  Identities=13%  Similarity=0.077  Sum_probs=135.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|++++..+.      .+..+.++.+|++|.++++++++       .
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999999999999999999998764432      23478899999999998887765       4


Q ss_pred             CcEEEEcCCc-----h---------------------HH----hhhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          164 VRSIICPSEG-----F---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       164 ~d~Vi~~~~~-----~---------------------~~----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      +|++||+++.     +                     +.    ..+.+.+..+||++||..+..+......|..+|..  
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  162 (247)
T 3lyl_A           83 IDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVI  162 (247)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHHH
Confidence            6999998320     0                     11    12344566799999999887666666666554431  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                      .+.+.....+...|+++++|+||++.........    ..+........+.+++|+|+++++++....  ..|++|++.+
T Consensus       163 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg  242 (247)
T 3lyl_A          163 GFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNG  242 (247)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECC
Confidence            1222233334457999999999998733221110    112233344567899999999999887543  4699999988


Q ss_pred             CC
Q 022625          286 IS  287 (294)
Q Consensus       286 g~  287 (294)
                      |-
T Consensus       243 G~  244 (247)
T 3lyl_A          243 GM  244 (247)
T ss_dssp             TS
T ss_pred             CE
Confidence            74

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.79  E-value=1.7e-18  Score=152.94  Aligned_cols=191  Identities=13%  Similarity=0.051  Sum_probs=132.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+++++.+.   .+..+.++.+|++|.++++++++       .+|+
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4679999999999999999999999999999999998765432   24568899999999988877765       4699


Q ss_pred             EEEcCC----c---------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HH
Q 022625          167 IICPSE----G---------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA  214 (294)
Q Consensus       167 Vi~~~~----~---------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~  214 (294)
                      +||+++    +         +                 +...+++.+ ++||++||..++.+......|..+|..-  +.
T Consensus        84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  162 (253)
T 1hxh_A           84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALT  162 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHHHHHH
Confidence            999822    0         0                 112344556 8999999998877665555665544321  22


Q ss_pred             HHHHHHHHhC--CCCEEEEEccceecCCC-----CCccee-ecc---CCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          215 EQDESMLMAS--GIPYTIIRTGVLQNTPG-----GKQGFQ-FEE---GCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       215 ~~ae~~l~~~--gl~~tivRPg~l~~~~~-----~~~~~~-~~~---g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                      +.....+...  |+++++||||.+.....     ...... +..   ......+.+++|+|+++++++..+.  ..|+.+
T Consensus       163 ~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~  242 (253)
T 1hxh_A          163 RAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSEL  242 (253)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccccCCCCcEE
Confidence            2222223334  89999999998762110     000000 111   1122346799999999999997653  468999


Q ss_pred             EEecCCc
Q 022625          282 EVCEISN  288 (294)
Q Consensus       282 ~v~~g~~  288 (294)
                      .+.+|..
T Consensus       243 ~vdgG~~  249 (253)
T 1hxh_A          243 HADNSIL  249 (253)
T ss_dssp             EESSSCT
T ss_pred             EECCCcc
Confidence            9988743

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.79  E-value=3.6e-18  Score=152.38  Aligned_cols=181  Identities=13%  Similarity=0.109  Sum_probs=129.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-------CCcEEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII  168 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi  168 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.....+.++.+|++|.++++++++       ++|++|
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            3467999999999999999999999999999999999888776655678999999999988887776       679999


Q ss_pred             EcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHHH
Q 022625          169 CPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ  216 (294)
Q Consensus       169 ~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~  216 (294)
                      |+++.     +                         +...+++.+..+||++||..++.+......|..+|..  .+.+.
T Consensus        93 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~  172 (266)
T 3p19_A           93 NNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISEN  172 (266)
T ss_dssp             ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHHH
Confidence            98321     0                         1223455678899999999888766666666555432  12223


Q ss_pred             HHHHHHhCCCCEEEEEccceecCCCCCcce-e----ecc-CCCCCCCcCHHHHHHHHHHHhhCCCC
Q 022625          217 DESMLMASGIPYTIIRTGVLQNTPGGKQGF-Q----FEE-GCAANGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       217 ae~~l~~~gl~~tivRPg~l~~~~~~~~~~-~----~~~-g~~~~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      ....+...|+++++|+||++.......... .    +.. ......+++++|+|+++++++.++..
T Consensus       173 la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~  238 (266)
T 3p19_A          173 VREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQN  238 (266)
T ss_dssp             HHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCC
Confidence            333345579999999999986322111000 0    000 01224468999999999999988754

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.79  E-value=1.1e-18  Score=155.21  Aligned_cols=197  Identities=13%  Similarity=0.108  Sum_probs=135.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---c-----CCCcEEeecCCCCHHHHHHHhc------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F-----GTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~-----~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      +.+|+++||||+|+||++++++|+++|++|++++|+.++..+.   .     +..+.++.+|++|.++++++++      
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999997654321   1     2357889999999998887775      


Q ss_pred             -CCcEEEEcCC-----ch-----------------HHhhhhhcC---CCEEEEecccccccCCCCchhccchhHHH--HH
Q 022625          163 -GVRSIICPSE-----GF-----------------ISNAGSLKG---VQHVILLSQLSVYRGSGGIQALMKGNARK--LA  214 (294)
Q Consensus       163 -~~d~Vi~~~~-----~~-----------------~~~~~~~~g---v~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~  214 (294)
                       .+|++||+++     .+                 +...+++.+   .++||++||..++.+......|..+|..-  +.
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  164 (267)
T 2gdz_A           85 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFT  164 (267)
T ss_dssp             SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHHHHHH
Confidence             4699999832     11                 122333432   67999999998876655555565444311  11


Q ss_pred             HH--HHHHHHhCCCCEEEEEccceecCCCCCc--ceee----------ccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcE
Q 022625          215 EQ--DESMLMASGIPYTIIRTGVLQNTPGGKQ--GFQF----------EEGCAANGSLSKEDAAFICVEALESIPQTGLI  280 (294)
Q Consensus       215 ~~--ae~~l~~~gl~~tivRPg~l~~~~~~~~--~~~~----------~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~  280 (294)
                      +.  .+..+...|+++++|+||.+........  ....          ........+++++|+|+++++++.++...|++
T Consensus       165 ~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~G~~  244 (267)
T 2gdz_A          165 RSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNGAI  244 (267)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCTTCSSCE
T ss_pred             HHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcCcCCCCcE
Confidence            21  1233456899999999998752110000  0000          00001134679999999999999887788999


Q ss_pred             EEEecCC-cccccc
Q 022625          281 FEVCEIS-NLCEQL  293 (294)
Q Consensus       281 ~~v~~g~-~~~~ei  293 (294)
                      |++.++. .++.|+
T Consensus       245 ~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          245 MKITTSKGIHFQDY  258 (267)
T ss_dssp             EEEETTTEEEECCC
T ss_pred             EEecCCCcccccCc
Confidence            9999875 455554

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.79  E-value=1.6e-18  Score=152.42  Aligned_cols=190  Identities=14%  Similarity=0.126  Sum_probs=130.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHHh---cCCcEEEEcCC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTAL---RGVRSIICPSE  172 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l---~~~d~Vi~~~~  172 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+++++.+... .+++++.+|++|.+++++++   .++|++||+++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag   83 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence            467999999999999999999999999999999999876554331 26788999999999887664   46799999832


Q ss_pred             ----c---------h-------------HHh----hhhhcCCCEEEEecccccccCCC-CchhccchhHH--HHHHHHHH
Q 022625          173 ----G---------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSG-GIQALMKGNAR--KLAEQDES  219 (294)
Q Consensus       173 ----~---------~-------------~~~----~~~~~gv~r~V~vSs~~~~~~~~-~~~~~~~~~~~--~~~~~ae~  219 (294)
                          +         +             +.+    .+++.+..+||++||..+..+.. ....|..+|..  .+.+....
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  163 (246)
T 2ag5_A           84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAA  163 (246)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHHHHHHHHHH
Confidence                0         0             111    23345778999999987765544 44455444431  11222222


Q ss_pred             HHHhCCCCEEEEEccceecCCCCCc--------c---eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          220 MLMASGIPYTIIRTGVLQNTPGGKQ--------G---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       220 ~l~~~gl~~tivRPg~l~~~~~~~~--------~---~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      .+...|+++++||||.+.. +....        .   ..+........+.+++|+|+++++++..+.  ..|+.+.+.+|
T Consensus       164 e~~~~gi~v~~v~Pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG  242 (246)
T 2ag5_A          164 DFIQQGIRCNCVCPGTVDT-PSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGG  242 (246)
T ss_dssp             HHGGGTEEEEEEEESCEEC-HHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             HhhhcCcEEEEEeeCcCcC-cchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            3345799999999999862 21000        0   001111122346799999999999987643  46899999887


Q ss_pred             C
Q 022625          287 S  287 (294)
Q Consensus       287 ~  287 (294)
                      -
T Consensus       243 ~  243 (246)
T 2ag5_A          243 W  243 (246)
T ss_dssp             G
T ss_pred             c
Confidence            4

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.79  E-value=2e-18  Score=154.79  Aligned_cols=192  Identities=15%  Similarity=0.123  Sum_probs=131.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---C--CCcEEeecCCCCHHHHHHHhc-------C
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G--TYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~--~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+..   .  ..+.++.+|++|.++++++++       +
T Consensus        26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (276)
T 2b4q_A           26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSAR  105 (276)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            467899999999999999999999999999999999986643321   1  157889999999998887775       6


Q ss_pred             CcEEEEcCCc-------------h-----------------HHhhhhhcCC----CEEEEecccccccCCCCch-hccch
Q 022625          164 VRSIICPSEG-------------F-----------------ISNAGSLKGV----QHVILLSQLSVYRGSGGIQ-ALMKG  208 (294)
Q Consensus       164 ~d~Vi~~~~~-------------~-----------------~~~~~~~~gv----~r~V~vSs~~~~~~~~~~~-~~~~~  208 (294)
                      +|++||+++.             +                 +...+++.+.    ++||++||..++.+..... .|..+
T Consensus       106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~as  185 (276)
T 2b4q_A          106 LDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPS  185 (276)
T ss_dssp             CSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHHH
Confidence            7999998320             0                 1112334444    8999999998776544443 55444


Q ss_pred             hHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc--c--eeecc--CCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--G--FQFEE--GCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       209 ~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~--~--~~~~~--g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      |..  .+.+.....+...|+++++|+||.+........  .  ..+..  ......+.+++|+|+++++++..+.  ..|
T Consensus       186 K~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG  265 (276)
T 2b4q_A          186 KAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAYMTG  265 (276)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCccccCCCC
Confidence            431  122222333445799999999999873321110  0  00111  2223456799999999999987653  468


Q ss_pred             cEEEEecCC
Q 022625          279 LIFEVCEIS  287 (294)
Q Consensus       279 ~~~~v~~g~  287 (294)
                      +++.+.+|.
T Consensus       266 ~~i~vdGG~  274 (276)
T 2b4q_A          266 NVIPIDGGF  274 (276)
T ss_dssp             CEEEESTTT
T ss_pred             CEEEeCCCc
Confidence            999998774

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.79  E-value=3.2e-18  Score=154.98  Aligned_cols=195  Identities=16%  Similarity=0.081  Sum_probs=134.5

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------C-CCcEEeecCCCCHHHHHHHhc----
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------G-TYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~-~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      ...+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+..      + ..+.++.+|++|.++++++++    
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  115 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD  115 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999987654321      1 368899999999988877664    


Q ss_pred             ---CCcEEEEcCCc-----h---------------------HHhh----hhhcCCCEEEEecccccc-cCCCCchhccch
Q 022625          163 ---GVRSIICPSEG-----F---------------------ISNA----GSLKGVQHVILLSQLSVY-RGSGGIQALMKG  208 (294)
Q Consensus       163 ---~~d~Vi~~~~~-----~---------------------~~~~----~~~~gv~r~V~vSs~~~~-~~~~~~~~~~~~  208 (294)
                         .+|++||+++.     +                     +.++    +++.+..+||++||..+. .+......|..+
T Consensus       116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~as  195 (293)
T 3rih_A          116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGAS  195 (293)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHH
Confidence               56999998321     0                     1112    345677899999998764 444445556444


Q ss_pred             hHH--HHHHHHHHHHHhCCCCEEEEEccceecCCC--CCc--ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPG--GKQ--GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       209 ~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~--~~~--~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      |..  .+.+.....+...|+++++|+||.+.....  ...  ...+........+.+++|+|+++++++....  ..|++
T Consensus       196 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~itG~~  275 (293)
T 3rih_A          196 KAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQA  275 (293)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCE
Confidence            431  122223333445799999999999873110  000  0011122233445689999999999887543  56999


Q ss_pred             EEEecCCc
Q 022625          281 FEVCEISN  288 (294)
Q Consensus       281 ~~v~~g~~  288 (294)
                      +++.+|..
T Consensus       276 i~vdGG~~  283 (293)
T 3rih_A          276 IVVDGGQV  283 (293)
T ss_dssp             EEESTTTT
T ss_pred             EEECCCcc
Confidence            99988753

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.79  E-value=1.1e-17  Score=149.85  Aligned_cols=194  Identities=13%  Similarity=0.046  Sum_probs=134.1

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-------------ccchhhh------cCCCcEEeecCCCCHH
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-------------KRNAMES------FGTYVESMAGDASNKK  155 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~-------------~~~~~~~------~~~~v~~v~~D~~d~~  155 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+             .+++.+.      .+..+.++.+|++|.+
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   90 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA   90 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            35678999999999999999999999999999999983             3332221      2346888999999999


Q ss_pred             HHHHHhc-------CCcEEEEcCCc-----h-------------------------HHhhhhhcC-CCEEEEeccccccc
Q 022625          156 FLKTALR-------GVRSIICPSEG-----F-------------------------ISNAGSLKG-VQHVILLSQLSVYR  197 (294)
Q Consensus       156 ~l~~~l~-------~~d~Vi~~~~~-----~-------------------------~~~~~~~~g-v~r~V~vSs~~~~~  197 (294)
                      +++++++       .+|++||+++.     +                         +...+++.+ ..+||++||..+..
T Consensus        91 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  170 (280)
T 3pgx_A           91 ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK  170 (280)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc
Confidence            8888775       67999998321     0                         111233444 57899999998887


Q ss_pred             CCCCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc---------ce---ee-ccCCCCCCCcCHHH
Q 022625          198 GSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ---------GF---QF-EEGCAANGSLSKED  262 (294)
Q Consensus       198 ~~~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~---------~~---~~-~~g~~~~~~Is~eD  262 (294)
                      +......|..+|..  .+.+.....+...|+++++|+||.+........         ..   .+ ........+.+++|
T Consensus       171 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~d  250 (280)
T 3pgx_A          171 ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADE  250 (280)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCSSCBCHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCCCCCCHHH
Confidence            76666666555432  122333333455799999999999873221110         00   00 11122234789999


Q ss_pred             HHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          263 AAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       263 vA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      +|+++++++....  ..|+++++.+|..
T Consensus       251 vA~~v~~L~s~~~~~itG~~i~vdGG~~  278 (280)
T 3pgx_A          251 VADVVAWLAGDGSGTLTGTQIPVDKGAL  278 (280)
T ss_dssp             HHHHHHHHHSGGGTTCSSCEEEESTTGG
T ss_pred             HHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            9999999987654  5699999988854

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.79  E-value=5.2e-18  Score=151.36  Aligned_cols=193  Identities=13%  Similarity=0.085  Sum_probs=134.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh-------hcCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ....+|+|+||||+|+||++++++|+++|++|+++.|+..+..+       ..+..+.++.+|++|.+++.++++     
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999999999996543211       123478899999999988887775     


Q ss_pred             --CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 --GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 --~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                        ++|++||+++.     +                         +...+++.+..+||++||..+..+..+...|..+|.
T Consensus       105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  184 (271)
T 4iin_A          105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKG  184 (271)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHH
Confidence              68999998321     0                         112234557789999999888766666666655443


Q ss_pred             HH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCc----ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEE
Q 022625          211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE  282 (294)
Q Consensus       211 ~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~  282 (294)
                      ..  +.+.....+...+++++.|+||.+........    ...+........+.+++|+|+++++++..+.  ..|++++
T Consensus       185 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~  264 (271)
T 4iin_A          185 GMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLK  264 (271)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEE
Confidence            21  22222233445799999999999863321110    0111122333456799999999999997644  5799999


Q ss_pred             EecCC
Q 022625          283 VCEIS  287 (294)
Q Consensus       283 v~~g~  287 (294)
                      +.+|-
T Consensus       265 vdGG~  269 (271)
T 4iin_A          265 VNGGL  269 (271)
T ss_dssp             ESTTS
T ss_pred             eCCCe
Confidence            98874

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.79  E-value=1.8e-18  Score=151.13  Aligned_cols=190  Identities=12%  Similarity=0.105  Sum_probs=129.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCccchhhh------cCCCcEE-eecCCCCHHHHHHHhc-------C
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVES-MAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~-~R~~~~~~~~------~~~~v~~-v~~D~~d~~~l~~~l~-------~  163 (294)
                      +|+|+||||+|+||++++++|+++|++|+++ .|++++..+.      .+..+.. +.+|++|.++++++++       +
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4799999999999999999999999999998 7887654332      1235666 8999999988887754       7


Q ss_pred             CcEEEEcCC----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          164 VRSIICPSE----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       164 ~d~Vi~~~~----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      +|+|||+++    + +                         +.+.+++.+.++||++||..+..+......|..+|..  
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  160 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLI  160 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHHH
Confidence            899999832    0 0                         1223455678999999998766555455555444431  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                      .+.+.....+...++++++||||.+.........    ..+........+++++|+|+++++++..+.  ..|+.|++.+
T Consensus       161 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  240 (245)
T 2ph3_A          161 GFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDG  240 (245)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECC
Confidence            1222222333446999999999987621100000    001112223457899999999999987643  4689999988


Q ss_pred             CCc
Q 022625          286 ISN  288 (294)
Q Consensus       286 g~~  288 (294)
                      |..
T Consensus       241 g~~  243 (245)
T 2ph3_A          241 GLT  243 (245)
T ss_dssp             TCS
T ss_pred             CCC
Confidence            754

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.79  E-value=3e-18  Score=152.56  Aligned_cols=185  Identities=9%  Similarity=0.048  Sum_probs=129.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-------CCcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi~  169 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|++++     +..+.++.+|++|.++++++++       ++|++||
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~   80 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN   80 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            567999999999999999999999999999999998765     3468899999999998888776       6899999


Q ss_pred             cCC----c---------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HHHHH
Q 022625          170 PSE----G---------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD  217 (294)
Q Consensus       170 ~~~----~---------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~a  217 (294)
                      +++    +         +                 +...+++.+.++||++||..++.+......|..+|..-  +.+..
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  160 (264)
T 2dtx_A           81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSI  160 (264)
T ss_dssp             CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHHHHHHH
Confidence            832    0         0                 11223445678999999998877665555665544321  11222


Q ss_pred             HHHHHhCCCCEEEEEccceecCCCC---------Cc----c--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          218 ESMLMASGIPYTIIRTGVLQNTPGG---------KQ----G--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       218 e~~l~~~gl~~tivRPg~l~~~~~~---------~~----~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      ...+... +++++|+||.+......         ..    .  ..+........+++++|+|+++++++..+.  ..|+.
T Consensus       161 a~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~  239 (264)
T 2dtx_A          161 ALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTC  239 (264)
T ss_dssp             HHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcE
Confidence            2222334 99999999987521100         00    0  001111223457899999999999987643  56899


Q ss_pred             EEEecCC
Q 022625          281 FEVCEIS  287 (294)
Q Consensus       281 ~~v~~g~  287 (294)
                      |++.+|.
T Consensus       240 i~vdGG~  246 (264)
T 2dtx_A          240 LYVDGGL  246 (264)
T ss_dssp             EEESTTG
T ss_pred             EEECCCc
Confidence            9998874

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.78  E-value=1.3e-17  Score=148.10  Aligned_cols=194  Identities=11%  Similarity=0.007  Sum_probs=133.5

Q ss_pred             CCcCCCCeEEEEcCCC-hHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCHHHHHHHhc---
Q 022625           94 FPEEARDAVLVTDGDS-DIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR---  162 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG-~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l~---  162 (294)
                      ...+.+|+++||||+| +||++++++|+++|++|+++.|+.+++.+.       .+..++++.+|++|.++++++++   
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            3456789999999997 799999999999999999999998764332       12478999999999998887775   


Q ss_pred             ----CCcEEEEcCCc-----h---------------------HHh----hhhhc-CCCEEEEecccccccCCCCchhccc
Q 022625          163 ----GVRSIICPSEG-----F---------------------ISN----AGSLK-GVQHVILLSQLSVYRGSGGIQALMK  207 (294)
Q Consensus       163 ----~~d~Vi~~~~~-----~---------------------~~~----~~~~~-gv~r~V~vSs~~~~~~~~~~~~~~~  207 (294)
                          .+|++||+++-     +                     +.+    .+++. +..+||++||..+..+..+...|..
T Consensus        97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  176 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAA  176 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHH
Confidence                56999998320     0                     111    12232 5678999999988776666666655


Q ss_pred             hhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCC-----cceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          208 GNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-----QGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       208 ~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-----~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      +|...  +.+.....+...|+++++|+||++.......     ....+........+.+++|+|+++++++....  ..|
T Consensus       177 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG  256 (266)
T 3o38_A          177 AKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTG  256 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccccCccC
Confidence            54321  2222223344579999999999876322111     01111222333556799999999999987643  579


Q ss_pred             cEEEEecCC
Q 022625          279 LIFEVCEIS  287 (294)
Q Consensus       279 ~~~~v~~g~  287 (294)
                      +++++.+|-
T Consensus       257 ~~i~vdgG~  265 (266)
T 3o38_A          257 EVVSVSSQR  265 (266)
T ss_dssp             CEEEESSCC
T ss_pred             CEEEEcCCc
Confidence            999998874

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.78  E-value=6.8e-18  Score=150.41  Aligned_cols=194  Identities=12%  Similarity=0.068  Sum_probs=132.5

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc-cchhh------hcCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME------SFGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~-~~~~~------~~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ....+|+++||||+|+||++++++|+++|++|+++.|.. +....      ..+..+.++.+|++|.++++++++     
T Consensus        21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (269)
T 3gk3_A           21 SMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD  100 (269)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            345678999999999999999999999999999998543 33221      123578999999999998887775     


Q ss_pred             --CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 --GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 --~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                        .+|++||+++.     +                         +...+.+.+..+||++||..+..+..+...|..+|.
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  180 (269)
T 3gk3_A          101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKA  180 (269)
T ss_dssp             HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHH
Confidence              78999998320     0                         111234456789999999888776666666655443


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----e-eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----F-QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                      .  .+.+.....+...|+++++|+||++.........    . .+........+.+++|+|+++++++..+.  ..|+++
T Consensus       181 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i  260 (269)
T 3gk3_A          181 GIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADL  260 (269)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEE
T ss_pred             HHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEE
Confidence            1  1222233334457999999999998733221110    0 11122233456689999999999987654  579999


Q ss_pred             EEecCCc
Q 022625          282 EVCEISN  288 (294)
Q Consensus       282 ~v~~g~~  288 (294)
                      ++.+|..
T Consensus       261 ~vdgG~~  267 (269)
T 3gk3_A          261 AINGGMH  267 (269)
T ss_dssp             EESTTSC
T ss_pred             EECCCEe
Confidence            9988753

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.78  E-value=2.2e-18  Score=152.62  Aligned_cols=188  Identities=15%  Similarity=0.136  Sum_probs=126.9

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcC-------CcEE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSI  167 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~-------~d~V  167 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+++++.     .+.++.+|++|.++++++++.       +|++
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~l   91 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----GFLAVKCDITDTEQVEQAYKEIEETHGPVEVL   91 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEE
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----cceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3456799999999999999999999999999999999876543     378899999999988877753       6999


Q ss_pred             EEcCCc-------------h-------------H----HhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHH
Q 022625          168 ICPSEG-------------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE  215 (294)
Q Consensus       168 i~~~~~-------------~-------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~  215 (294)
                      ||+++.             +             +    ...+++.+..+||++||..+..+......|..+|..  .+.+
T Consensus        92 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  171 (253)
T 2nm0_A           92 IANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFAR  171 (253)
T ss_dssp             EEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHH
Confidence            997220             0             1    112344577899999998776543334445433321  1122


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      .....+...|+++++|+||++.........    ..+........+++++|+|+++++++.++.  ..|+.+.+.+|.
T Consensus       172 ~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~  249 (253)
T 2nm0_A          172 SLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIPVDGGL  249 (253)
T ss_dssp             HHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCcc
Confidence            222334457899999999987632211100    001111222457899999999999997653  478999998874

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.78  E-value=5.2e-18  Score=149.22  Aligned_cols=190  Identities=14%  Similarity=0.091  Sum_probs=133.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc-cchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~-~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      .+|+++||||+|+||++++++|+++|++|+++.|.. ++..+.      .+..+.++.+|++|.++++++++       +
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999988754 332221      23468889999999999888776       7


Q ss_pred             CcEEEEcCCc-----h---------------------HHhh----hhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          164 VRSIICPSEG-----F---------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       164 ~d~Vi~~~~~-----~---------------------~~~~----~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      +|++||+++.     +                     +.++    +++.+..+||++||..+..+..+...|..+|..  
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  162 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVI  162 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHH
Confidence            7999998320     0                     1112    355677899999998877666666666555431  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                      .+.+.....+...|+++++|+||.+.........    ..+........+.+++|+|+++++++..+.  ..|++|++.+
T Consensus       163 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdg  242 (246)
T 3osu_A          163 GLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNG  242 (246)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence            1222333334457999999999998733221110    011123334556789999999999887654  4599999988


Q ss_pred             CC
Q 022625          286 IS  287 (294)
Q Consensus       286 g~  287 (294)
                      |-
T Consensus       243 G~  244 (246)
T 3osu_A          243 GM  244 (246)
T ss_dssp             TS
T ss_pred             Cc
Confidence            74

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.78  E-value=4.4e-18  Score=151.36  Aligned_cols=192  Identities=11%  Similarity=0.065  Sum_probs=135.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.      .+..+.++.+|++|.++++++++       
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45689999999999999999999999999999999998764432      23478899999999998887775       


Q ss_pred             CCcEEEEcCCc------h---------------------HH----hhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 GVRSIICPSEG------F---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 ~~d~Vi~~~~~------~---------------------~~----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      .+|++||+++.      +                     +.    ..+.+.+ .+||++||..+..+......|..+|..
T Consensus        88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa  166 (264)
T 3ucx_A           88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSA  166 (264)
T ss_dssp             CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHHH
Confidence            67999998321      0                     11    1123344 799999999888776666666555432


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCC-------------c--ceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-------------Q--GFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-------------~--~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                        .+.+.....+...|+++++|+||++.......             .  ...+........+.+++|+|+++++++...
T Consensus       167 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~  246 (264)
T 3ucx_A          167 LLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDL  246 (264)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCcc
Confidence              12233333345589999999999986211000             0  001112333455779999999999988764


Q ss_pred             C--CCCcEEEEecCCc
Q 022625          275 P--QTGLIFEVCEISN  288 (294)
Q Consensus       275 ~--~~g~~~~v~~g~~  288 (294)
                      .  ..|+++++.+|..
T Consensus       247 ~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          247 ASGITGQALDVNCGEY  262 (264)
T ss_dssp             GTTCCSCEEEESTTSS
T ss_pred             ccCCCCCEEEECCCcc
Confidence            3  5799999988853

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.78  E-value=4.3e-18  Score=152.04  Aligned_cols=193  Identities=13%  Similarity=0.083  Sum_probs=134.5

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-ccchhhh------cCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES------FGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~-~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|. .+...+.      .+..+.++.+|++|.++++++++     
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999884 3332221      23478899999999998887775     


Q ss_pred             --CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 --GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 --~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                        .+|++||+++.     +                         +...+++.+..+||++||..+..+......|..+|.
T Consensus       104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  183 (269)
T 4dmm_A          104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKA  183 (269)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHH
Confidence              67999998321     0                         111234567789999999887766655556655443


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc-eeeccCCCCCCCcCHHHHHHHHHHHhhCCC---CCCcEEEEe
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG-FQFEEGCAANGSLSKEDAAFICVEALESIP---QTGLIFEVC  284 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~-~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~---~~g~~~~v~  284 (294)
                      .  .+.+.....+...|+++++|+||.+......... ..+........+.+++|+|+++++++.++.   ..|++|++.
T Consensus       184 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vd  263 (269)
T 4dmm_A          184 GVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINID  263 (269)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEES
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEEC
Confidence            1  1222333334457999999999998732211100 011122233456789999999999998743   469999998


Q ss_pred             cCC
Q 022625          285 EIS  287 (294)
Q Consensus       285 ~g~  287 (294)
                      +|-
T Consensus       264 GG~  266 (269)
T 4dmm_A          264 GGL  266 (269)
T ss_dssp             TTS
T ss_pred             CCe
Confidence            874

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.78  E-value=1.5e-18  Score=155.74  Aligned_cols=194  Identities=16%  Similarity=0.131  Sum_probs=134.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CC---CcEEeecCCCCHHHHHHHhc---
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GT---YVESMAGDASNKKFLKTALR---  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~---~v~~v~~D~~d~~~l~~~l~---  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+..      +.   .+.++.+|++|.++++++++   
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999987643321      11   67889999999988887775   


Q ss_pred             ----CCcEEEEcCCc------h---------------------H----HhhhhhcCCCEEEEecccccccCCCCchhccc
Q 022625          163 ----GVRSIICPSEG------F---------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMK  207 (294)
Q Consensus       163 ----~~d~Vi~~~~~------~---------------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~  207 (294)
                          .+|++||+++.      +                     +    ...+.+.+-.+||++||..++.+......|..
T Consensus        87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  166 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGV  166 (281)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHH
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHH
Confidence                56999998331      0                     1    11233455679999999988776666666655


Q ss_pred             hhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCC----Cc--ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          208 GNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQ--GFQFEEGCAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       208 ~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~----~~--~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                      +|..-  +.+.....+...|+++++|+||++......    ..  ...+........+.+++|+|+++++++.+..  ..
T Consensus       167 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~it  246 (281)
T 3svt_A          167 TKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVT  246 (281)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCCC
Confidence            54321  222223334457899999999997632110    00  0011112233456789999999999987644  46


Q ss_pred             CcEEEEecCCc
Q 022625          278 GLIFEVCEISN  288 (294)
Q Consensus       278 g~~~~v~~g~~  288 (294)
                      |++|++.+|..
T Consensus       247 G~~~~vdgG~~  257 (281)
T 3svt_A          247 GQVINVDGGQM  257 (281)
T ss_dssp             SCEEEESTTGG
T ss_pred             CCEEEeCCChh
Confidence            99999988754

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.78  E-value=2.4e-18  Score=154.37  Aligned_cols=194  Identities=13%  Similarity=0.130  Sum_probs=133.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      ....+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.      .+..+.++.+|++|.++++++++      
T Consensus        20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            345679999999999999999999999999999999998764432      23478899999999998887765      


Q ss_pred             -CCcEEEEcCCc-----h---------------------HHhh------hhhcCCCEEEEecccccccCCCCchhccchh
Q 022625          163 -GVRSIICPSEG-----F---------------------ISNA------GSLKGVQHVILLSQLSVYRGSGGIQALMKGN  209 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~---------------------~~~~------~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~  209 (294)
                       .+|++||+++.     +                     +.++      +++.+..+||++||..+..+......|..+|
T Consensus       100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK  179 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASK  179 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHH
Confidence             67999998321     0                     1111      3345678999999998877666666665544


Q ss_pred             HH--HHHHHHHHHHHhCCCCEEEEEccceecCCCC--------C----c---ceeeccCCCCCCCcCHHHHHHHHHHHhh
Q 022625          210 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGG--------K----Q---GFQFEEGCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       210 ~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~--------~----~---~~~~~~g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                      ..  .+.+.....+...|+++++|+||.+......        .    .   ...+........+.+++|+|+++++++.
T Consensus       180 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s  259 (279)
T 3sju_A          180 HGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVT  259 (279)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence            31  1222222333447899999999987521100        0    0   0011122333456789999999999887


Q ss_pred             CCC--CCCcEEEEecCCc
Q 022625          273 SIP--QTGLIFEVCEISN  288 (294)
Q Consensus       273 ~~~--~~g~~~~v~~g~~  288 (294)
                      ...  ..|+++++.+|-.
T Consensus       260 ~~a~~itG~~i~vdGG~~  277 (279)
T 3sju_A          260 DAAASITAQALNVCGGLG  277 (279)
T ss_dssp             SGGGGCCSCEEEESTTCC
T ss_pred             ccccCcCCcEEEECCCcc
Confidence            654  5799999988854

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.78  E-value=2.5e-18  Score=150.26  Aligned_cols=189  Identities=15%  Similarity=0.144  Sum_probs=128.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~-~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      +|+|+||||+|+||++++++|+++|++|+++ .|++++....      .+..+.++.+|++|.++++++++       ++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4899999999999999999999999999995 7876554321      23468889999999999988876       68


Q ss_pred             cEEEEcCC----c---------h-------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHHH--
Q 022625          165 RSIICPSE----G---------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--  212 (294)
Q Consensus       165 d~Vi~~~~----~---------~-------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--  212 (294)
                      |+|||+++    +         +             +.+    .+.+.+.++||++||..+..+......|..+|...  
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (244)
T 1edo_A           81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG  160 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHHH
Confidence            99999832    0         0             111    23345778999999987765554555554444311  


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCCC--cc--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC---CCCcEEEEec
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGK--QG--FQFEEGCAANGSLSKEDAAFICVEALESIP---QTGLIFEVCE  285 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~--~~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~---~~g~~~~v~~  285 (294)
                      +.+.....+...|+++++||||.+.......  ..  ..+........+++++|+|+++++++..+.   ..|+.|++.+
T Consensus       161 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~g  240 (244)
T 1edo_A          161 FSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDG  240 (244)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEEST
T ss_pred             HHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCC
Confidence            2222223344579999999999876321100  00  001111222457899999999999885442   4689999987


Q ss_pred             CC
Q 022625          286 IS  287 (294)
Q Consensus       286 g~  287 (294)
                      |.
T Consensus       241 G~  242 (244)
T 1edo_A          241 GI  242 (244)
T ss_dssp             TT
T ss_pred             Cc
Confidence            74

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.78  E-value=2.9e-18  Score=150.13  Aligned_cols=186  Identities=14%  Similarity=0.140  Sum_probs=127.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHh-------cCCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l-------~~~d~Vi~~~  171 (294)
                      +|+++||||+|+||++++++|+++|++|+++.|++++..+..  ++.++.+|++| +++++++       .++|++||++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~A   78 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSL--GAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAA   78 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH--TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhh--CcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECC
Confidence            589999999999999999999999999999999987644333  37889999998 6665544       3789999983


Q ss_pred             C-----ch-------------------------HHhhhhhcCCCEEEEecccccccCC--CCchhccchhHH--HHHHHH
Q 022625          172 E-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGS--GGIQALMKGNAR--KLAEQD  217 (294)
Q Consensus       172 ~-----~~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~--~~~~~~~~~~~~--~~~~~a  217 (294)
                      +     .+                         +...+++.+.++||++||..++.+.  .+...|..+|..  .+.+..
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l  158 (239)
T 2ekp_A           79 AVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRAL  158 (239)
T ss_dssp             CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHHHHHHHH
Confidence            2     00                         1112345678999999999887654  444555444431  122233


Q ss_pred             HHHHHhCCCCEEEEEccceecCCCCC----cce--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          218 ESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       218 e~~l~~~gl~~tivRPg~l~~~~~~~----~~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      ...+...|+++++||||.+.......    ...  .+........+.+++|+|+++++++..+.  ..|+.+.+.+|-
T Consensus       159 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          159 AKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             HHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence            33345579999999999876321100    000  01111222346799999999999887543  468999998874

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.78  E-value=5e-18  Score=152.62  Aligned_cols=193  Identities=16%  Similarity=0.107  Sum_probs=134.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|++++|+.+++.+.      .+..+.++.+|++|.++++++++       
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG   84 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35689999999999999999999999999999999998764432      13468899999999988887775       


Q ss_pred             CCcEEEEcCC-----c-h-------------------------HHhhhhhcCCCEEEEecccccc-cCCCCchhccchhH
Q 022625          163 GVRSIICPSE-----G-F-------------------------ISNAGSLKGVQHVILLSQLSVY-RGSGGIQALMKGNA  210 (294)
Q Consensus       163 ~~d~Vi~~~~-----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~-~~~~~~~~~~~~~~  210 (294)
                      .+|++||+++     + +                         +...+++.+..+||++||..++ .+......|..+|.
T Consensus        85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKa  164 (280)
T 3tox_A           85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKA  164 (280)
T ss_dssp             CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHH
Confidence            6899999832     0 0                         1112345566799999998876 44445555654443


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCCCC-----cc---eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-----QG---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-----~~---~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      .  .+.+.....+...|+++++|+||.+.......     ..   ..+........+.+++|+|+++++++.+..  ..|
T Consensus       165 a~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG  244 (280)
T 3tox_A          165 GLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTG  244 (280)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccCCcC
Confidence            1  12223333345579999999999987322111     00   001122233456799999999999997643  569


Q ss_pred             cEEEEecCCc
Q 022625          279 LIFEVCEISN  288 (294)
Q Consensus       279 ~~~~v~~g~~  288 (294)
                      +++++.+|..
T Consensus       245 ~~i~vdGG~~  254 (280)
T 3tox_A          245 AALLADGGAS  254 (280)
T ss_dssp             CEEEESTTGG
T ss_pred             cEEEECCCcc
Confidence            9999988854

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.78  E-value=4.6e-18  Score=152.23  Aligned_cols=194  Identities=13%  Similarity=0.144  Sum_probs=137.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc------CCc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR------GVR  165 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~------~~d  165 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|++++|+.+++.+.   .+..+.++.+|++|.++++++++      ..|
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id  105 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLR  105 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEE
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            456789999999999999999999999999999999998765443   34578999999999999888775      469


Q ss_pred             EEEEcCCc-------------------h-------------HHhh----hhh------cCCCEEEEecccccccCCCCch
Q 022625          166 SIICPSEG-------------------F-------------ISNA----GSL------KGVQHVILLSQLSVYRGSGGIQ  203 (294)
Q Consensus       166 ~Vi~~~~~-------------------~-------------~~~~----~~~------~gv~r~V~vSs~~~~~~~~~~~  203 (294)
                      ++||+..+                   +             +..+    +.+      .+..+||++||..++.+.....
T Consensus       106 ~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  185 (281)
T 3ppi_A          106 YAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQT  185 (281)
T ss_dssp             EEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCH
T ss_pred             eEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCc
Confidence            99987211                   0             1111    111      3456999999998887766666


Q ss_pred             hccchhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCC----cceeeccCCCC-CCCcCHHHHHHHHHHHhhCCCC
Q 022625          204 ALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQFEEGCAA-NGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       204 ~~~~~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----~~~~~~~g~~~-~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      .|..+|..-  +.+.....+...|++++.|+||.+.......    ....+...... ..+.+++|+|+++++++.++..
T Consensus       186 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~  265 (281)
T 3ppi_A          186 AYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLLTNGYI  265 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHCSSC
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHcCCCc
Confidence            665554321  2223333345579999999999876211100    00011112222 5578999999999999998767


Q ss_pred             CCcEEEEecCCc
Q 022625          277 TGLIFEVCEISN  288 (294)
Q Consensus       277 ~g~~~~v~~g~~  288 (294)
                      .|+++++.+|..
T Consensus       266 tG~~i~vdGG~~  277 (281)
T 3ppi_A          266 NGEVMRLDGAQR  277 (281)
T ss_dssp             CSCEEEESTTCC
T ss_pred             CCcEEEECCCcc
Confidence            899999988754

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.78  E-value=9.6e-18  Score=148.45  Aligned_cols=189  Identities=17%  Similarity=0.141  Sum_probs=131.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc--hhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~--~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +|+++||||+|+||++++++|+++|++|+++.|++++  +.+.      .+..+.++.+|++|.++++++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999998765  3322      13468889999999998887775       7


Q ss_pred             CcEEEEcCC-----ch-------------------------HHhhhhhcCC-CEEEEecccccccCCCCchhccchhHH-
Q 022625          164 VRSIICPSE-----GF-------------------------ISNAGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       164 ~d~Vi~~~~-----~~-------------------------~~~~~~~~gv-~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      +|++||+++     .+                         +...+++.+. .+||++||..+..+......|..+|.. 
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  161 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAV  161 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHH
Confidence            899999832     00                         1112334566 899999999887665555566544432 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCC-----------C--cc-e-eeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGG-----------K--QG-F-QFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~-----------~--~~-~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                       .+.+.....+...|+++++|+||++......           .  .. . .+........+.+++|+|+++++++..+.
T Consensus       162 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~  241 (258)
T 3a28_C          162 RGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASENS  241 (258)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccc
Confidence             1222333334557999999999987521100           0  00 0 01111122346799999999999987653


Q ss_pred             --CCCcEEEEecCC
Q 022625          276 --QTGLIFEVCEIS  287 (294)
Q Consensus       276 --~~g~~~~v~~g~  287 (294)
                        ..|+.+.+.+|.
T Consensus       242 ~~~tG~~i~vdGG~  255 (258)
T 3a28_C          242 NYVTGQVMLVDGGM  255 (258)
T ss_dssp             TTCCSCEEEESSSS
T ss_pred             CCCCCCEEEECCCE
Confidence              478999998874

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.78  E-value=5.6e-18  Score=143.97  Aligned_cols=161  Identities=14%  Similarity=0.112  Sum_probs=115.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcC---CcEEEEcCC----
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG---VRSIICPSE----  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~---~d~Vi~~~~----  172 (294)
                      |+|+||||+|+||++++++|+ +|++|+++.|+++           .+.+|++|.+++++++++   +|+|||+.+    
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~   71 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSATF   71 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCCC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence            589999999999999999999 9999999999874           467999999999888875   799999832    


Q ss_pred             -ch---------------------HHhhhhhc---CCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHH-----
Q 022625          173 -GF---------------------ISNAGSLK---GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLM-----  222 (294)
Q Consensus       173 -~~---------------------~~~~~~~~---gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~-----  222 (294)
                       .+                     +.+++...   + ++||++||..++.+......|..+|.     ..|.+.+     
T Consensus        72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~Y~~sK~-----~~~~~~~~~~~e  145 (202)
T 3d7l_A           72 SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQGASAAMANG-----AVTAFAKSAAIE  145 (202)
T ss_dssp             CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTTCHHHHHHHH-----HHHHHHHHHTTS
T ss_pred             CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCccHHHHHHHH-----HHHHHHHHHHHH
Confidence             00                     12223222   3 79999999887765555445533322     2333332     


Q ss_pred             -hCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 022625          223 -ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVC  284 (294)
Q Consensus       223 -~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~  284 (294)
                       ..++++++||||.+.....     .+..+.....+++++|+|++++.++. ....|++|++.
T Consensus       146 ~~~gi~v~~v~pg~v~~~~~-----~~~~~~~~~~~~~~~dva~~~~~~~~-~~~~G~~~~vd  202 (202)
T 3d7l_A          146 MPRGIRINTVSPNVLEESWD-----KLEPFFEGFLPVPAAKVARAFEKSVF-GAQTGESYQVY  202 (202)
T ss_dssp             CSTTCEEEEEEECCBGGGHH-----HHGGGSTTCCCBCHHHHHHHHHHHHH-SCCCSCEEEEC
T ss_pred             ccCCeEEEEEecCccCCchh-----hhhhhccccCCCCHHHHHHHHHHhhh-ccccCceEecC
Confidence             2489999999999873211     11122334678999999999998884 35668888873

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.78  E-value=1.1e-17  Score=148.11  Aligned_cols=192  Identities=13%  Similarity=0.062  Sum_probs=130.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+.   .+..+.++.+|++|.++++++++       .+|
T Consensus         6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   85 (261)
T 3n74_A            6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVD   85 (261)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            45689999999999999999999999999999999998765443   34578999999999998887775       679


Q ss_pred             EEEEcCC-----c-h-------------------------HHhhhhhcC----CCEEEEecccccccCCCCchhccchhH
Q 022625          166 SIICPSE-----G-F-------------------------ISNAGSLKG----VQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       166 ~Vi~~~~-----~-~-------------------------~~~~~~~~g----v~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                      ++||+++     + +                         +...+++.+    ..+||++||..+..+......|..+|.
T Consensus        86 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKa  165 (261)
T 3n74_A           86 ILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKG  165 (261)
T ss_dssp             EEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHHH
T ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHHH
Confidence            9999822     1 0                         111122222    457999999988776666666655443


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCCCC--------cceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~--------~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      .  .+.+.....+...+++++.|+||.+.......        ....+........+++++|+|+++++++....  ..|
T Consensus       166 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG  245 (261)
T 3n74_A          166 WVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITG  245 (261)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCC
Confidence            2  12223333344579999999999876321110        00111122333557899999999999886543  579


Q ss_pred             cEEEEecCC
Q 022625          279 LIFEVCEIS  287 (294)
Q Consensus       279 ~~~~v~~g~  287 (294)
                      +++++.+|.
T Consensus       246 ~~i~vdgG~  254 (261)
T 3n74_A          246 VALDVDGGR  254 (261)
T ss_dssp             CEEEESTTT
T ss_pred             cEEEecCCc
Confidence            999998874

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.78  E-value=2.9e-18  Score=152.80  Aligned_cols=193  Identities=15%  Similarity=0.083  Sum_probs=135.5

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.       .+..++++.+|++|.++++++++     
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999998764332       34578999999999988877765     


Q ss_pred             --CCcEEEEcCC-----ch-------------------------HHhhhhhcC-CCEEEEecccccccCCCCchhccchh
Q 022625          163 --GVRSIICPSE-----GF-------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGN  209 (294)
Q Consensus       163 --~~d~Vi~~~~-----~~-------------------------~~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~  209 (294)
                        .+|++||+++     .+                         +...+.+.+ ..+||++||..++.+......|..+|
T Consensus        96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  175 (266)
T 4egf_A           96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSK  175 (266)
T ss_dssp             HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHH
Confidence              7899999822     00                         111233333 46999999998887766666665554


Q ss_pred             HH--HHHHHHHHHHHhCCCCEEEEEccceecCCC----CCc--ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCc
Q 022625          210 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQ--GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGL  279 (294)
Q Consensus       210 ~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~----~~~--~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~  279 (294)
                      ..  .+.+.....+...|++++.|+||++.....    ...  ...+........+.+++|+|+++++++....  ..|+
T Consensus       176 ~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~  255 (266)
T 4egf_A          176 AGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGV  255 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCc
Confidence            31  122333333455799999999998762210    000  0011122233456789999999999887643  5799


Q ss_pred             EEEEecCC
Q 022625          280 IFEVCEIS  287 (294)
Q Consensus       280 ~~~v~~g~  287 (294)
                      ++++.+|.
T Consensus       256 ~i~vdGG~  263 (266)
T 4egf_A          256 DIPVDGGY  263 (266)
T ss_dssp             EEEESTTG
T ss_pred             EEEECCCc
Confidence            99998875

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.78  E-value=3.8e-18  Score=152.93  Aligned_cols=191  Identities=10%  Similarity=0.059  Sum_probs=131.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CC---CcEEeecCCCCHHHHHHHhc-----
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GT---YVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~---~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+++++.+..      +.   .+.++.+|++|.++++++++     
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            46799999999999999999999999999999999987644321      12   58889999999988887765     


Q ss_pred             --CCcEEEEcCC-----c----h---------------------H----HhhhhhcCCCEEEEecccccccCC-CCchhc
Q 022625          163 --GVRSIICPSE-----G----F---------------------I----SNAGSLKGVQHVILLSQLSVYRGS-GGIQAL  205 (294)
Q Consensus       163 --~~d~Vi~~~~-----~----~---------------------~----~~~~~~~gv~r~V~vSs~~~~~~~-~~~~~~  205 (294)
                        .+|++||+++     .    +                     +    ...+.+.+ .+||++||..++.+. .....|
T Consensus        84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y  162 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYY  162 (280)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHH
T ss_pred             cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccHH
Confidence              6799999832     1    1                     1    11123345 899999999877655 455556


Q ss_pred             cchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-------------ceeeccCCCCCCCcCHHHHHHHHHHH
Q 022625          206 MKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-------------GFQFEEGCAANGSLSKEDAAFICVEA  270 (294)
Q Consensus       206 ~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-------------~~~~~~g~~~~~~Is~eDvA~~iv~a  270 (294)
                      ..+|..  .+.+.....+...|+++++|+||++........             ...+........+.+++|+|++++++
T Consensus       163 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l  242 (280)
T 1xkq_A          163 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL  242 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHHh
Confidence            444431  122223333455799999999999863211000             00011112224567999999999999


Q ss_pred             hhCC---CCCCcEEEEecCCc
Q 022625          271 LESI---PQTGLIFEVCEISN  288 (294)
Q Consensus       271 L~~~---~~~g~~~~v~~g~~  288 (294)
                      +..+   ...|+.+++.+|..
T Consensus       243 ~s~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          243 ADRNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             HCHHHHTTCCSCEEEESTTGG
T ss_pred             cCcccccCccCCeEEECCCcc
Confidence            8754   35789999988743

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.78  E-value=1.7e-18  Score=155.40  Aligned_cols=193  Identities=18%  Similarity=0.116  Sum_probs=135.0

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.   .+..+.++.+|++|.++++++++       .+|
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  105 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVD  105 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            45789999999999999999999999999999999998765432   34578999999999988877765       679


Q ss_pred             EEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HH
Q 022625          166 SIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL  213 (294)
Q Consensus       166 ~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~  213 (294)
                      ++||+++.     +                         +...+++.+..+||++||..+..+......|..+|..  .+
T Consensus       106 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l  185 (277)
T 3gvc_A          106 KLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQL  185 (277)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHHH
Confidence            99998321     0                         1112344567899999999887776666666555432  12


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCC----C----Ccceeecc---CCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPG----G----KQGFQFEE---GCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~----~----~~~~~~~~---g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      .+.....+...|+++++|+||.+.....    .    ........   ......+.+++|+|+++++++....  ..|++
T Consensus       186 ~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~  265 (277)
T 3gvc_A          186 SRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTT  265 (277)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCCccCcE
Confidence            2233333455799999999998762110    0    00000000   1112346789999999999997643  57999


Q ss_pred             EEEecCCc
Q 022625          281 FEVCEISN  288 (294)
Q Consensus       281 ~~v~~g~~  288 (294)
                      +++.+|..
T Consensus       266 i~vdGG~~  273 (277)
T 3gvc_A          266 QIADGGTI  273 (277)
T ss_dssp             EEESTTGG
T ss_pred             EEECCcch
Confidence            99988753

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.78  E-value=1.3e-17  Score=150.01  Aligned_cols=193  Identities=16%  Similarity=0.172  Sum_probs=130.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.      .+..+.++.+|++|.++++++++       
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (283)
T 3v8b_A           25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFG  104 (283)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            45679999999999999999999999999999999998764432      12468899999999988887775       


Q ss_pred             CCcEEEEcCCc------h---------------------H----HhhhhhcCCCEEEEeccccccc--CCCCchhccchh
Q 022625          163 GVRSIICPSEG------F---------------------I----SNAGSLKGVQHVILLSQLSVYR--GSGGIQALMKGN  209 (294)
Q Consensus       163 ~~d~Vi~~~~~------~---------------------~----~~~~~~~gv~r~V~vSs~~~~~--~~~~~~~~~~~~  209 (294)
                      .+|++||+++.      +                     +    ...+++.+..+||++||..+..  +..+...|..+|
T Consensus       105 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asK  184 (283)
T 3v8b_A          105 HLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATK  184 (283)
T ss_dssp             CCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHH
Confidence            67999998220      0                     1    1123556778999999988765  444444554444


Q ss_pred             HHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----------eeeccCC-CC--CCCcCHHHHHHHHHHHhhCC
Q 022625          210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----------FQFEEGC-AA--NGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       210 ~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----------~~~~~g~-~~--~~~Is~eDvA~~iv~aL~~~  274 (294)
                      ..-  +.+.....+...|+++++|+||.+.........          ....... ..  ..+.+++|+|+++++++...
T Consensus       185 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~  264 (283)
T 3v8b_A          185 AAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSER  264 (283)
T ss_dssp             HHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCcc
Confidence            311  112222223347899999999998633221110          0000111 11  34568999999999988764


Q ss_pred             C--CCCcEEEEecCCc
Q 022625          275 P--QTGLIFEVCEISN  288 (294)
Q Consensus       275 ~--~~g~~~~v~~g~~  288 (294)
                      .  ..|+++.+.+|..
T Consensus       265 a~~itG~~i~vdGG~~  280 (283)
T 3v8b_A          265 ARHVTGSPVWIDGGQG  280 (283)
T ss_dssp             GTTCCSCEEEESTTHH
T ss_pred             ccCCcCCEEEECcCcc
Confidence            4  4699999988743

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.78  E-value=5.6e-18  Score=149.30  Aligned_cols=192  Identities=17%  Similarity=0.197  Sum_probs=135.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.   .+..+.++.+|++|.++++++++       .+|
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGID   82 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence            45689999999999999999999999999999999998765443   34578999999999998888776       689


Q ss_pred             EEEEcCCc-----h---------------------HH----hhhhhcC-CCEEEEecccccccCCCCchhccchhHH--H
Q 022625          166 SIICPSEG-----F---------------------IS----NAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--K  212 (294)
Q Consensus       166 ~Vi~~~~~-----~---------------------~~----~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~~--~  212 (294)
                      ++||+++.     +                     +.    ..+++.+ ..+||++||..+..+......|..+|..  .
T Consensus        83 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  162 (247)
T 3rwb_A           83 ILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIG  162 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHH
Confidence            99998321     0                     11    1244555 6899999999887766666666555431  1


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCC----CCcceeeccC-CCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQFEEG-CAANGSLSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~----~~~~~~~~~g-~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                      +.+.....+...|++++.|+||.+.....    ......+... .....+.+++|+|+++++++....  ..|+++++.+
T Consensus       163 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdG  242 (247)
T 3rwb_A          163 FTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQTLNVDA  242 (247)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            22333333455799999999998762110    0000000011 223445789999999999887653  4799999988


Q ss_pred             CC
Q 022625          286 IS  287 (294)
Q Consensus       286 g~  287 (294)
                      |-
T Consensus       243 G~  244 (247)
T 3rwb_A          243 GM  244 (247)
T ss_dssp             TS
T ss_pred             Cc
Confidence            74

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.78  E-value=1.6e-17  Score=146.94  Aligned_cols=187  Identities=13%  Similarity=0.087  Sum_probs=132.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHHhc-------CCcEEEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRSIIC  169 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi~  169 (294)
                      +|+|+||||+++||++++++|+++|++|+++.|+++++.+...  .++..+++|++|+++++++++       .+|++||
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5899999999999999999999999999999999877655433  468889999999988877654       5699999


Q ss_pred             cCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHHHHHH
Q 022625          170 PSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQD  217 (294)
Q Consensus       170 ~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~~a  217 (294)
                      +++.     +                         +...+++.+ .++|++||..+..+......|..+|.  ..+.+..
T Consensus        82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~l  160 (247)
T 3ged_A           82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAKGGIVALTHAL  160 (247)
T ss_dssp             CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHHHHHHHHHHHHH
Confidence            8321     0                         112234444 79999999988777666666755553  2233333


Q ss_pred             HHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 022625          218 ESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       218 e~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                      ...+. .+++++.|.||++...................-+-.++|+|.++++++...-..|+++.|.+|-
T Consensus       161 A~ela-~~IrVN~I~PG~i~t~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~s~~~iTG~~i~VDGG~  229 (247)
T 3ged_A          161 AMSLG-PDVLVNCIAPGWINVTEQQEFTQEDCAAIPAGKVGTPKDISNMVLFLCQQDFITGETIIVDGGM  229 (247)
T ss_dssp             HHHHT-TTSEEEEEEECSBCCCC---CCHHHHHTSTTSSCBCHHHHHHHHHHHHHCSSCCSCEEEESTTG
T ss_pred             HHHHC-CCCEEEEEecCcCCCCCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHhCCCCCCCeEEECcCH
Confidence            33344 4899999999998632211111111111222335689999999999998655689999998774

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.77  E-value=2.7e-18  Score=152.36  Aligned_cols=192  Identities=15%  Similarity=0.120  Sum_probs=133.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~-~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      .+|+++||||+|+||++++++|+++|++|+++ .|+.+++.+.      .+..+.++.+|++|.++++++++       .
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999997 7776654332      23478899999999998887775       4


Q ss_pred             CcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          164 VRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       164 ~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      +|++||+++.     +                         +...+++.+..+||++||..+..+......|..+|..  
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  162 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALE  162 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHH
Confidence            5999998321     0                         1122355667899999999887766666666554431  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc------eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG------FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~------~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                      .+.+.....+...|+++++|+||.+.........      ..+........+.+++|+|+++++++..+.  ..|+++++
T Consensus       163 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~v  242 (258)
T 3oid_A          163 ALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIV  242 (258)
T ss_dssp             HHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEE
T ss_pred             HHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEE
Confidence            1222222223446899999999987632111000      001112233457899999999999998754  46999999


Q ss_pred             ecCCcc
Q 022625          284 CEISNL  289 (294)
Q Consensus       284 ~~g~~~  289 (294)
                      .+|...
T Consensus       243 dGG~~~  248 (258)
T 3oid_A          243 DGGRSL  248 (258)
T ss_dssp             STTGGG
T ss_pred             CCCccC
Confidence            888543

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.77  E-value=1.3e-18  Score=148.30  Aligned_cols=167  Identities=16%  Similarity=0.179  Sum_probs=119.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHHhc---CCcEEEEcCCc-
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR---GVRSIICPSEG-  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~---~~d~Vi~~~~~-  173 (294)
                      |+++||||+|+||++++++|+++  +|++++|++++......  .. +++.+|++|.+++.++++   ++|+|||+.+. 
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   77 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGKA   77 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            68999999999999999999998  99999998876543221  12 889999999999999988   89999998220 


Q ss_pred             -------------------------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HHHHHHHHHHhCCC
Q 022625          174 -------------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDESMLMASGI  226 (294)
Q Consensus       174 -------------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~ae~~l~~~gl  226 (294)
                                               .+.+++.+.+.++||++||..++.+..+...|..+|...  +.+.....+...|+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi  157 (207)
T 2yut_A           78 GRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGV  157 (207)
T ss_dssp             CCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhCC
Confidence                                     023344555678999999998877666666664444311  12222223344799


Q ss_pred             CEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          227 PYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       227 ~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      ++++||||.+....      ....+.....+++++|+|+++++++.++.
T Consensus       158 ~v~~v~pg~v~t~~------~~~~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          158 HLVLVRLPAVATGL------WAPLGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             EEEEECCCCBCSGG------GGGGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             EEEEEecCcccCCC------ccccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999987321      11123344678999999999999997754

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.77  E-value=1.3e-17  Score=148.10  Aligned_cols=177  Identities=15%  Similarity=0.108  Sum_probs=122.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      ..+.+|+|+||||+|+||++++++|+++|++|++++|+.+++.+.      .+..++++.+|++|.+++.++++      
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            446789999999999999999999999999999999998765432      23468899999999998887765      


Q ss_pred             -CCcEEEEcCCc------h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 -GVRSIICPSEG------F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 -~~d~Vi~~~~~------~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                       .+|+|||+++.      +                         +...+++.+..+||++||..++.+......|..+|.
T Consensus       105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  184 (262)
T 3rkr_A          105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKW  184 (262)
T ss_dssp             SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHH
Confidence             47999998321      0                         111234566789999999988877666666655443


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      .  .+.+.....+...|+++++|+||.+.......    ..........++++|+|+++++++..+.
T Consensus       185 a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----~~~~~~~~~~~~p~dvA~~v~~l~s~~~  247 (262)
T 3rkr_A          185 GLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG----LSAKKSALGAIEPDDIADVVALLATQAD  247 (262)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------CCCHHHHHHHHHHHHTCCT
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc----cccccccccCCCHHHHHHHHHHHhcCcc
Confidence            1  12222333345579999999999987332211    1111223456899999999999998754

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.77  E-value=4.4e-18  Score=154.17  Aligned_cols=191  Identities=12%  Similarity=0.082  Sum_probs=132.0

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CC---CcEEeecCCCCHHHHHHHhc----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GT---YVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~---~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+..      +.   .+.++.+|++|.++++++++    
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999987644321      22   58889999999998887775    


Q ss_pred             ---CCcEEEEcCC-----c--h-------------------------HHhhhhhcCCCEEEEecccccccCC-CCchhcc
Q 022625          163 ---GVRSIICPSE-----G--F-------------------------ISNAGSLKGVQHVILLSQLSVYRGS-GGIQALM  206 (294)
Q Consensus       163 ---~~d~Vi~~~~-----~--~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~-~~~~~~~  206 (294)
                         ++|++||+++     .  +                         +...+.+.+ .+||++||..+..+. .....|.
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~Y~  181 (297)
T 1xhl_A          103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYA  181 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHH
T ss_pred             hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcchHH
Confidence               6899999832     1  1                         111233445 899999998877654 4445554


Q ss_pred             chhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-----------c--eeeccCCCCCCCcCHHHHHHHHHHHh
Q 022625          207 KGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-----------G--FQFEEGCAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       207 ~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-----------~--~~~~~g~~~~~~Is~eDvA~~iv~aL  271 (294)
                      .+|..  .+.+.....+...|+++++|+||.+........           .  ..+........+.+++|+|+++++++
T Consensus       182 asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~  261 (297)
T 1xhl_A          182 CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA  261 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            44431  122223333455799999999998763211000           0  00111112245689999999999998


Q ss_pred             hCC---CCCCcEEEEecCC
Q 022625          272 ESI---PQTGLIFEVCEIS  287 (294)
Q Consensus       272 ~~~---~~~g~~~~v~~g~  287 (294)
                      ..+   ...|+.+.+.+|.
T Consensus       262 s~~~~~~itG~~i~vdGG~  280 (297)
T 1xhl_A          262 DRNLSSYIIGQSIVADGGS  280 (297)
T ss_dssp             CHHHHTTCCSCEEEESTTG
T ss_pred             CCcccCCccCcEEEECCCc
Confidence            754   3578999998874

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.77  E-value=4.2e-18  Score=152.26  Aligned_cols=194  Identities=12%  Similarity=0.094  Sum_probs=136.3

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.      .+..+.++.+|++|.++++++++      
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            346789999999999999999999999999999999998764432      23468889999999988887775      


Q ss_pred             -CCcEEEEcCC----c---------h-------------HH----hhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 -GVRSIICPSE----G---------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 -~~d~Vi~~~~----~---------~-------------~~----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                       .+|++||+++    +         +             +.    ..+.+.+..+||++||..+..+..+...|..+|..
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  183 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAG  183 (270)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHH
Confidence             6899999832    1         0             11    12344566899999998887766666666555431


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCC----CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~----~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                        .+.+.....+...|+++++|+||.+.....    ......+........+.+++|+|+++++++....  ..|+++++
T Consensus       184 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~v  263 (270)
T 3ftp_A          184 VAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHV  263 (270)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccCcEEEE
Confidence              122333333455799999999998762210    0000111122333456799999999999886543  47999999


Q ss_pred             ecCCc
Q 022625          284 CEISN  288 (294)
Q Consensus       284 ~~g~~  288 (294)
                      .+|..
T Consensus       264 dGG~~  268 (270)
T 3ftp_A          264 NGGMF  268 (270)
T ss_dssp             STTSS
T ss_pred             CCCcc
Confidence            88753

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.77  E-value=3.7e-18  Score=150.40  Aligned_cols=191  Identities=17%  Similarity=0.102  Sum_probs=112.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      ....+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.      .+..+.++.+|++|.++++++++      
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF   84 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            345689999999999999999999999999999999998765432      13468889999999998888776      


Q ss_pred             -CCcEEEEcCCc---h------------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccch
Q 022625          163 -GVRSIICPSEG---F------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       163 -~~d~Vi~~~~~---~------------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                       ++|++||+++-   .                              +...+++.+..+||++||..++...   ..|..+
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~Y~as  161 (253)
T 3qiv_A           85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYS---NYYGLA  161 (253)
T ss_dssp             SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CC
T ss_pred             CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCC---chhHHH
Confidence             78999998321   0                              1122455677899999998876322   234444


Q ss_pred             hHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-----ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCc
Q 022625          209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-----GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGL  279 (294)
Q Consensus       209 ~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-----~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~  279 (294)
                      |..  .+.+.....+...|+++++|+||.+........     ...+..+.....+.+++|+|+++++++....  ..|+
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~  241 (253)
T 3qiv_A          162 KVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQ  241 (253)
T ss_dssp             HHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------CCHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccCCCCC
Confidence            331  112222222334689999999999863221100     0111122223345578999999999987543  4799


Q ss_pred             EEEEecCCc
Q 022625          280 IFEVCEISN  288 (294)
Q Consensus       280 ~~~v~~g~~  288 (294)
                      +|++.+|..
T Consensus       242 ~~~vdgG~~  250 (253)
T 3qiv_A          242 IFNVDGGQI  250 (253)
T ss_dssp             EEEC-----
T ss_pred             EEEECCCee
Confidence            999988753

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.77  E-value=3.8e-18  Score=152.38  Aligned_cols=190  Identities=14%  Similarity=0.113  Sum_probs=131.8

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      .....+|+||||||+|+||++++++|+++|++|+++.|+.+...    ..+..+.+|++|.++++++++       .+|+
T Consensus         9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A            9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----CceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            34567899999999999999999999999999999999886653    257788999999998888775       6799


Q ss_pred             EEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HH
Q 022625          167 IICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LA  214 (294)
Q Consensus       167 Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~  214 (294)
                      +||+++.     +                         +...+++.+..+||++||..++.+......|..+|..-  +.
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~  164 (269)
T 3vtz_A           85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLT  164 (269)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHHHH
Confidence            9998321     0                         11124456778999999998887766666665544311  11


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCCC---------CCc------ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTPG---------GKQ------GFQFEEGCAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~~---------~~~------~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                      +.....+. .++++++|+||.+.....         ...      ...+........+.+++|+|+++++++....  ..
T Consensus       165 ~~la~e~~-~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~it  243 (269)
T 3vtz_A          165 RSVAIDYA-PKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFIT  243 (269)
T ss_dssp             HHHHHHHT-TTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHhc-CCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccCCCc
Confidence            22222222 389999999998762110         000      0001112233456789999999999987643  57


Q ss_pred             CcEEEEecCCc
Q 022625          278 GLIFEVCEISN  288 (294)
Q Consensus       278 g~~~~v~~g~~  288 (294)
                      |+++++.+|-.
T Consensus       244 G~~i~vdGG~~  254 (269)
T 3vtz_A          244 GACLTVDGGLL  254 (269)
T ss_dssp             SCEEEESTTGG
T ss_pred             CcEEEECCCcc
Confidence            99999988854

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.77  E-value=1.1e-17  Score=146.08  Aligned_cols=179  Identities=18%  Similarity=0.151  Sum_probs=118.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccchhhhc---CCCcEEeecCCCCHHHHHHHhc---------C
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALR---------G  163 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~l~---------~  163 (294)
                      .+|+|+||||+|+||++++++|+++|  ++|+++.|+.++.....   ...++++.+|++|.+++.++++         +
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            46899999999999999999999999  99999999987654332   3478999999999998888776         8


Q ss_pred             CcEEEEcCC--c------------h-------------HHhh----hhhc------C-----CCEEEEecccccccCC--
Q 022625          164 VRSIICPSE--G------------F-------------ISNA----GSLK------G-----VQHVILLSQLSVYRGS--  199 (294)
Q Consensus       164 ~d~Vi~~~~--~------------~-------------~~~~----~~~~------g-----v~r~V~vSs~~~~~~~--  199 (294)
                      +|+|||+++  .            +             +.++    +.+.      +     ..+||++||..++.+.  
T Consensus        82 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  161 (250)
T 1yo6_A           82 LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT  161 (250)
T ss_dssp             CCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC
T ss_pred             CcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcc
Confidence            999999821  1            0             1111    2223      4     7899999998775543  


Q ss_pred             -----CCchhccchhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhh
Q 022625          200 -----GGIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       200 -----~~~~~~~~~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                           .+...|..+|...  +.+.....+...|+++++|+||++......           ....++++|+|+.+++++.
T Consensus       162 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----------~~~~~~~~~~a~~~~~~~~  230 (250)
T 1yo6_A          162 SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG-----------KNAALTVEQSTAELISSFN  230 (250)
T ss_dssp             STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------HHHHHHHHHHHT
T ss_pred             cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCC-----------CCCCCCHHHHHHHHHHHHh
Confidence                 2333443333211  111111222335899999999998632211           1246899999999999998


Q ss_pred             CCC--CCCcEEEEecCC
Q 022625          273 SIP--QTGLIFEVCEIS  287 (294)
Q Consensus       273 ~~~--~~g~~~~v~~g~  287 (294)
                      .+.  ..|+.+.+.++.
T Consensus       231 ~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          231 KLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             TCCGGGTTCEEETTEEE
T ss_pred             cccccCCCeEEEECCcC
Confidence            765  357777665544

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.77  E-value=4.3e-18  Score=152.53  Aligned_cols=193  Identities=12%  Similarity=0.063  Sum_probs=135.5

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+.++..+.       .+..+.++.+|++|.++++++++     
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999997654322       24578899999999988887765     


Q ss_pred             --CCcEEEEcCCc-----h---------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 --GVRSIICPSEG-----F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 --~~d~Vi~~~~~-----~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                        .+|++||+++.     +                     +.+    .+.+.+..+||++||..+..+......|..+|.
T Consensus       103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  182 (277)
T 4fc7_A          103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKA  182 (277)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHH
T ss_pred             cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHH
Confidence              67999998321     0                     111    123445679999999988776665556654443


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCC-----CCcc--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCc
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPG-----GKQG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGL  279 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~-----~~~~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~  279 (294)
                      .  .+.+.....+...|++++.|+||++.....     ....  ..+........+.+++|+|+++++++....  ..|+
T Consensus       183 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~itG~  262 (277)
T 4fc7_A          183 AVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGA  262 (277)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCCcCCC
Confidence            1  122333333455799999999999873210     0000  011122233456789999999999987543  5799


Q ss_pred             EEEEecCC
Q 022625          280 IFEVCEIS  287 (294)
Q Consensus       280 ~~~v~~g~  287 (294)
                      ++++.+|.
T Consensus       263 ~i~vdGG~  270 (277)
T 4fc7_A          263 VLVADGGA  270 (277)
T ss_dssp             EEEESTTH
T ss_pred             EEEECCCc
Confidence            99998874

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.77  E-value=4.9e-18  Score=149.58  Aligned_cols=187  Identities=13%  Similarity=0.114  Sum_probs=126.0

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-------CCcEEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII  168 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi  168 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|++++..+.     ..+.+|++|.++++++++       .+|++|
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   86 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLV   86 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----EEEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh-----cCeeccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45689999999999999999999999999999999988765432     247899999988887765       569999


Q ss_pred             EcCCc-------------h-------------H----HhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHHH
Q 022625          169 CPSEG-------------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ  216 (294)
Q Consensus       169 ~~~~~-------------~-------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~  216 (294)
                      |+++.             +             +    ...+++.+.++||++||..+..+......|..+|..  .+.+.
T Consensus        87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  166 (247)
T 1uzm_A           87 SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARS  166 (247)
T ss_dssp             EECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHHHHHH
Confidence            98321             0             1    112345677899999998776554445555444431  12223


Q ss_pred             HHHHHHhCCCCEEEEEccceecCCCCC--cc--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          217 DESMLMASGIPYTIIRTGVLQNTPGGK--QG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       217 ae~~l~~~gl~~tivRPg~l~~~~~~~--~~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      ....+...|+++++|+||.+.......  ..  ..+........+.+++|+|+++++++..+.  ..|+.+++.+|.
T Consensus       167 la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~  243 (247)
T 1uzm_A          167 IARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM  243 (247)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCCc
Confidence            333344579999999999876211000  00  001111122346899999999999987543  478999998874

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.77  E-value=1.2e-17  Score=147.72  Aligned_cols=179  Identities=12%  Similarity=0.061  Sum_probs=119.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc------C
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR------G  163 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~------~  163 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+..      +..+.++.+|++|.++++++++      .
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~   83 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP   83 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence            356899999999999999999999999999999999987754321      3468899999999999988876      6


Q ss_pred             CcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          164 VRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       164 ~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      +|++||+++.     +                         +...+++.+..+||++||..+..+......|..+|..  
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  163 (252)
T 3h7a_A           84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLR  163 (252)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHH
T ss_pred             ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHH
Confidence            7999998321     0                         1122455667899999999887766666666555432  


Q ss_pred             HHHHHHHHHHHhCCCCE-EEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          212 KLAEQDESMLMASGIPY-TIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~-tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      .+.+.....+...|+++ ++|+||.+.........    ..+.... ...+.+++|+|+++++++..+.
T Consensus       164 ~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~~~pedvA~~~~~l~s~~~  231 (252)
T 3h7a_A          164 AVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALAN-PDLLMPPAAVAGAYWQLYQQPK  231 (252)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEEC----------------------------CCHHHHHHHHHHHHHCCG
T ss_pred             HHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhcC-CccCCCHHHHHHHHHHHHhCch
Confidence            12233333345578999 89999987632211100    0011111 2237899999999999998754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.77  E-value=1.3e-17  Score=150.29  Aligned_cols=194  Identities=15%  Similarity=0.128  Sum_probs=128.8

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---CCCcEEeecCCCCHHHHHHHhc---CCcEE
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALR---GVRSI  167 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~l~---~~d~V  167 (294)
                      ...+.+|+++||||+|+||++++++|+++|++|++++|+.++..+..   +..++++.+|++|.++++++++   .+|++
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~l   90 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVL   90 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEE
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence            34567899999999999999999999999999999999987755443   3478999999999999999987   45999


Q ss_pred             EEcCCc-----------h-------------HHhhhhhcCCCEEEEecccccccCC-------------CCchhccchhH
Q 022625          168 ICPSEG-----------F-------------ISNAGSLKGVQHVILLSQLSVYRGS-------------GGIQALMKGNA  210 (294)
Q Consensus       168 i~~~~~-----------~-------------~~~~~~~~gv~r~V~vSs~~~~~~~-------------~~~~~~~~~~~  210 (294)
                      ||+++-           +             +.+++.....+|||++||..++...             .+...|..+|.
T Consensus        91 v~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  170 (291)
T 3rd5_A           91 INNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKL  170 (291)
T ss_dssp             EECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHH
T ss_pred             EECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHH
Confidence            998321           0             2334444445699999998775431             12223433332


Q ss_pred             HH--HHHHHHHHHHhCC--CCEEEEEccceecCCCCCcceeec----cCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEE
Q 022625          211 RK--LAEQDESMLMASG--IPYTIIRTGVLQNTPGGKQGFQFE----EGCAANGSLSKEDAAFICVEALESIPQTGLIFE  282 (294)
Q Consensus       211 ~~--~~~~ae~~l~~~g--l~~tivRPg~l~~~~~~~~~~~~~----~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~  282 (294)
                      ..  +.+.....+...|  ++++.|+||.+...........+.    ......-..+++|+|+.+++++..+...|+.|.
T Consensus       171 a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~l~~~~~~~G~~~~  250 (291)
T 3rd5_A          171 ANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYAASQDLPGDSFVG  250 (291)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------CHHHHHHHHHHHHHHHSCCCTTCEEE
T ss_pred             HHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHcCCCCCCceeC
Confidence            11  1122222233355  999999999986332211100000    000111223589999999999998767889999


Q ss_pred             EecCC
Q 022625          283 VCEIS  287 (294)
Q Consensus       283 v~~g~  287 (294)
                      +.+|-
T Consensus       251 vdgG~  255 (291)
T 3rd5_A          251 PRFGY  255 (291)
T ss_dssp             ETTSS
T ss_pred             Ccccc
Confidence            87663

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.77  E-value=1.1e-17  Score=149.20  Aligned_cols=192  Identities=13%  Similarity=0.055  Sum_probs=129.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-Cccchhhhc-------CCCcEEeecCCCCH----HHHHHHhc-
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMESF-------GTYVESMAGDASNK----KFLKTALR-  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~-------~~~v~~v~~D~~d~----~~l~~~l~-  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|++++| +++++.+..       +..+.++.+|++|.    ++++++++ 
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            356799999999999999999999999999999999 766543221       45688999999999    88887765 


Q ss_pred             ------CCcEEEEcCC-----------------------c-h-------------HHhhhhh---cCC------CEEEEe
Q 022625          163 ------GVRSIICPSE-----------------------G-F-------------ISNAGSL---KGV------QHVILL  190 (294)
Q Consensus       163 ------~~d~Vi~~~~-----------------------~-~-------------~~~~~~~---~gv------~r~V~v  190 (294)
                            ++|++||+++                       . +             +.+++..   .+.      .+||++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i  167 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  167 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence                  7899999822                       1 0             1111221   344      799999


Q ss_pred             cccccccCCCCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce---eeccCCCCCC-CcCHHHHH
Q 022625          191 SQLSVYRGSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF---QFEEGCAANG-SLSKEDAA  264 (294)
Q Consensus       191 Ss~~~~~~~~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~---~~~~g~~~~~-~Is~eDvA  264 (294)
                      ||..++.+..+...|..+|..  .+.+.....+...|+++++|+||.+... ......   .+........ +.+++|+|
T Consensus       168 sS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~~~~~p~~r~~~~~~dva  246 (276)
T 1mxh_A          168 CDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEYRRKVPLGQSEASAAQIA  246 (276)
T ss_dssp             CCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHHHHHTTCTTTSCCBCHHHHH
T ss_pred             CchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            999887766555566554432  1222223334457999999999998733 210000   0111112223 78999999


Q ss_pred             HHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          265 FICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       265 ~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      +++++++..+.  ..|+.|++.+|-.
T Consensus       247 ~~v~~l~s~~~~~~tG~~~~vdgG~~  272 (276)
T 1mxh_A          247 DAIAFLVSKDAGYITGTTLKVDGGLI  272 (276)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCccccCccCcEEEECCchh
Confidence            99999987543  3689999988743

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.77  E-value=1.3e-17  Score=149.65  Aligned_cols=193  Identities=9%  Similarity=0.025  Sum_probs=129.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch-hh------hcCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-ME------SFGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~-~~------~~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+.++. ..      ..+..+.++.+|++|.+++.++++     
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999987542 11      123468889999999988877654     


Q ss_pred             --CCcEEEEcCCc-----h---------------------HHhhhhhc--CCCEEEEecccccccCCC-CchhccchhHH
Q 022625          163 --GVRSIICPSEG-----F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSG-GIQALMKGNAR  211 (294)
Q Consensus       163 --~~d~Vi~~~~~-----~---------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~-~~~~~~~~~~~  211 (294)
                        ++|++||+++.     +                     +.+++...  +..+||++||..+..+.. ....|..+|..
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a  184 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGA  184 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchHHHHHH
Confidence              67999998320     0                     12223332  568999999987765433 24455444431


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCC---------C----cc--eeecc--CCCCCCCcCHHHHHHHHHHHhh
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGG---------K----QG--FQFEE--GCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~---------~----~~--~~~~~--g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                        .+.+.....+...|+++++|+||.+......         .    ..  ..+..  ......+.+++|+|+++++++.
T Consensus       185 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s  264 (283)
T 1g0o_A          185 IETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLAS  264 (283)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHhC
Confidence              1222223334457999999999987621100         0    00  00111  2222346789999999999997


Q ss_pred             CCC--CCCcEEEEecCC
Q 022625          273 SIP--QTGLIFEVCEIS  287 (294)
Q Consensus       273 ~~~--~~g~~~~v~~g~  287 (294)
                      .+.  ..|+++.+.+|-
T Consensus       265 ~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          265 NDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             GGGTTCCSCEEEESTTC
T ss_pred             ccccCcCCCEEEeCCCc
Confidence            643  568999998774

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.77  E-value=1.2e-17  Score=147.15  Aligned_cols=188  Identities=15%  Similarity=0.101  Sum_probs=136.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc---CCcEEEEcCC--
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPSE--  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~---~~d~Vi~~~~--  172 (294)
                      .||+++||||+++||+++++.|+++|++|++..|+.+.+.+.....+..+.+|++|+++++++++   .+|++||+++  
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~   89 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGIS   89 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            69999999999999999999999999999999999988776666789999999999999888776   4699999832  


Q ss_pred             -ch-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHHHHHHHHHHHhC
Q 022625          173 -GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESMLMAS  224 (294)
Q Consensus       173 -~~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~~ae~~l~~~  224 (294)
                       .+                         ....+++.+ .+||++||..+..+......|..+|.  ..+.+.....+...
T Consensus        90 ~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~  168 (242)
T 4b79_A           90 RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAE  168 (242)
T ss_dssp             CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhhc
Confidence             10                         112234444 79999999988776666666755553  22344445556678


Q ss_pred             CCCEEEEEccceecCCCCCc----c--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          225 GIPYTIIRTGVLQNTPGGKQ----G--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       225 gl~~tivRPg~l~~~~~~~~----~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      ||+++.|.||++........    .  ..+.......-+-.++|+|.++++++.+..  ..|+++.|.+|
T Consensus       169 gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG  238 (242)
T 4b79_A          169 RIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGG  238 (242)
T ss_dssp             TEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCceEEECcc
Confidence            99999999999763211100    0  001111222335589999999999886644  47899999877

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.77  E-value=2e-17  Score=147.84  Aligned_cols=192  Identities=14%  Similarity=0.099  Sum_probs=129.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc------------cchhh------hcCCCcEEeecCCCCHHH
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK------------RNAME------SFGTYVESMAGDASNKKF  156 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~------------~~~~~------~~~~~v~~v~~D~~d~~~  156 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+.            +.+.+      ..+..+.++.+|++|.++
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   88 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES   88 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            356789999999999999999999999999999999872            22211      123578999999999999


Q ss_pred             HHHHhc-------CCcEEEEcCCc---------h-------------HH----hhhhhcC-CCEEEEecccccccCC---
Q 022625          157 LKTALR-------GVRSIICPSEG---------F-------------IS----NAGSLKG-VQHVILLSQLSVYRGS---  199 (294)
Q Consensus       157 l~~~l~-------~~d~Vi~~~~~---------~-------------~~----~~~~~~g-v~r~V~vSs~~~~~~~---  199 (294)
                      ++++++       .+|++||+++.         +             +.    ..+.+.+ ..+||++||..+..+.   
T Consensus        89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  168 (278)
T 3sx2_A           89 LSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSA  168 (278)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccC
Confidence            888776       78999998321         0             11    1233333 5799999998876543   


Q ss_pred             -CCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc---------------eeeccCCCCCCCcCHH
Q 022625          200 -GGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---------------FQFEEGCAANGSLSKE  261 (294)
Q Consensus       200 -~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~---------------~~~~~g~~~~~~Is~e  261 (294)
                       .....|..+|..  .+.+.....+...|++++.|+||++.........               ..+..... ..+.+++
T Consensus       169 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~  247 (278)
T 3sx2_A          169 DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPE  247 (278)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHH
T ss_pred             CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHH
Confidence             223344333321  1222223334457899999999998733221100               00111112 4677999


Q ss_pred             HHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          262 DAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       262 DvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      |+|+++++++....  ..|+++++.+|-
T Consensus       248 dvA~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          248 DVANAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHhCcccccccCCEEeECCCc
Confidence            99999999887543  579999998874

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.77  E-value=2e-18  Score=154.47  Aligned_cols=194  Identities=14%  Similarity=0.079  Sum_probs=137.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+.      .+..+.++.+|++|.++++++++      
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            456789999999999999999999999999999999998764432      23478899999999999888776      


Q ss_pred             -CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 -GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                       .+|++||+++.     +                         +...+++.+..+||++||..+..+......|..+|..
T Consensus       102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa  181 (271)
T 4ibo_A          102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGG  181 (271)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHH
Confidence             67999998321     0                         1122445567899999999887766666666555432


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc----c--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----G--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                        .+.+.....+...|++++.|+||.+........    .  ..+........+.+++|+|+++++++....  ..|+++
T Consensus       182 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i  261 (271)
T 4ibo_A          182 IKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQII  261 (271)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEE
Confidence              122223333455799999999999873211000    0  001112233456789999999999887543  579999


Q ss_pred             EEecCCc
Q 022625          282 EVCEISN  288 (294)
Q Consensus       282 ~v~~g~~  288 (294)
                      ++.+|..
T Consensus       262 ~vdGG~~  268 (271)
T 4ibo_A          262 YVDGGML  268 (271)
T ss_dssp             EESTTGG
T ss_pred             EECCCee
Confidence            9988854

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.76  E-value=1.2e-17  Score=149.76  Aligned_cols=194  Identities=12%  Similarity=0.087  Sum_probs=133.7

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.      .+..+.++.+|++|.++++++++      
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            456789999999999999999999999999999999998765432      23478899999999999888776      


Q ss_pred             -CCcEEEEcCCc-----h-------------------------HHhhhhhcC-CCEEEEecccccccCC--CCchhccch
Q 022625          163 -GVRSIICPSEG-----F-------------------------ISNAGSLKG-VQHVILLSQLSVYRGS--GGIQALMKG  208 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~-------------------------~~~~~~~~g-v~r~V~vSs~~~~~~~--~~~~~~~~~  208 (294)
                       ++|++||+++.     +                         +...+.+.+ -.+||++||..+....  .....|..+
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~as  187 (276)
T 3r1i_A          108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTS  187 (276)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHH
Confidence             78999998321     0                         111233344 3789999998775432  234455444


Q ss_pred             hHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc---eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       209 ~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~---~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                      |..  .+.+.....+...|++++.|+||++.........   ..+........+.+++|+|+++++++....  ..|+++
T Consensus       188 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i  267 (276)
T 3r1i_A          188 KAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSDI  267 (276)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEE
Confidence            431  1222233334457999999999998733221110   011122233456789999999999987543  579999


Q ss_pred             EEecCCc
Q 022625          282 EVCEISN  288 (294)
Q Consensus       282 ~v~~g~~  288 (294)
                      ++.+|-.
T Consensus       268 ~vdGG~~  274 (276)
T 3r1i_A          268 VIDGGYT  274 (276)
T ss_dssp             EESTTTT
T ss_pred             EECcCcc
Confidence            9988754

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.76  E-value=5e-18  Score=150.01  Aligned_cols=193  Identities=14%  Similarity=0.132  Sum_probs=127.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh-------hcCCCcEEeecCCCCHHHHHHHhcC-----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALRG-----  163 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~v~~v~~D~~d~~~l~~~l~~-----  163 (294)
                      .+.+|+|+||||+|+||++++++|+++|++|+++.|+.++..+       ..+..++++.+|++|.++++++++.     
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   90 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            3567899999999999999999999999999999997654321       1245688999999999988877653     


Q ss_pred             --CcEEEEcCCc-----h---------------------HHhh----hhhcC-CCEEEEecccccccCCCC-------ch
Q 022625          164 --VRSIICPSEG-----F---------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGG-------IQ  203 (294)
Q Consensus       164 --~d~Vi~~~~~-----~---------------------~~~~----~~~~g-v~r~V~vSs~~~~~~~~~-------~~  203 (294)
                        +|+|||+++.     +                     +.++    +.+.+ .++||++||..++.+...       ..
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~  170 (265)
T 1h5q_A           91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV  170 (265)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccccccccc
Confidence              7999998321     0                     1111    22333 489999999876543221       23


Q ss_pred             hccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc--c--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--
Q 022625          204 ALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--G--FQFEEGCAANGSLSKEDAAFICVEALESIP--  275 (294)
Q Consensus       204 ~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~--~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--  275 (294)
                      .|..+|..  .+.+.....+...|+++++||||.+........  .  ..+........+.+++|+|+++++++.++.  
T Consensus       171 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  250 (265)
T 1h5q_A          171 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATY  250 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcCcccCCCCHHHHHHHHHhhccCchhc
Confidence            34333221  111222222344689999999999873211110  0  001111222457899999999999997643  


Q ss_pred             CCCcEEEEecCCc
Q 022625          276 QTGLIFEVCEISN  288 (294)
Q Consensus       276 ~~g~~~~v~~g~~  288 (294)
                      ..|+.|++.+|..
T Consensus       251 ~~G~~~~v~gG~~  263 (265)
T 1h5q_A          251 MTGGEYFIDGGQL  263 (265)
T ss_dssp             CCSCEEEECTTGG
T ss_pred             CcCcEEEecCCEe
Confidence            5789999988753

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.76  E-value=7.6e-18  Score=148.60  Aligned_cols=194  Identities=13%  Similarity=0.078  Sum_probs=132.0

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEE-cCccchhhh------cCCCcEEeecCCCCHHHHHHHhc----
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMES------FGTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~-R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      ....++|+|+||||+|+||++++++|+++|++|++++ |+.++..+.      .+..+.++.+|++|.++++++++    
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999988 554432221      23468899999999988887775    


Q ss_pred             ---CCcEEEEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchh
Q 022625          163 ---GVRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN  209 (294)
Q Consensus       163 ---~~d~Vi~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~  209 (294)
                         .+|++||+++.             +                 +...+++.+..+||++||..+..+..+...|..+|
T Consensus        88 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  167 (256)
T 3ezl_A           88 EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAK  167 (256)
T ss_dssp             HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHH
T ss_pred             hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHH
Confidence               67999998220             0                 12234556778999999998887766666665554


Q ss_pred             HHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCc----ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       210 ~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                      ...  +.+.....+...|+++++|+||.+........    ...+........+.+++|+|+++++++....  ..|++|
T Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i  247 (256)
T 3ezl_A          168 AGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADF  247 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCcCcEE
Confidence            321  22223333445789999999998762211000    0001112233456789999999999886543  579999


Q ss_pred             EEecCC
Q 022625          282 EVCEIS  287 (294)
Q Consensus       282 ~v~~g~  287 (294)
                      ++.+|-
T Consensus       248 ~vdgG~  253 (256)
T 3ezl_A          248 SLNGGL  253 (256)
T ss_dssp             EESTTS
T ss_pred             EECCCE
Confidence            998875

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.76  E-value=6.2e-18  Score=151.39  Aligned_cols=191  Identities=12%  Similarity=0.086  Sum_probs=127.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---C--CCcEEeecCCCCHHHHHHHhcCC-------cEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G--TYVESMAGDASNKKFLKTALRGV-------RSI  167 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~--~~v~~v~~D~~d~~~l~~~l~~~-------d~V  167 (294)
                      |+++||||+|+||++++++|+++|++|+++.|+++++.+..   .  ..+.++.+|++|.++++++++.+       |++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            89999999999999999999999999999999987654321   1  26888999999999999888654       999


Q ss_pred             EEcCC-----c-h-------------------------HHhhhhhcCCC-EEEEecccccccCCCCchhccchhHHH--H
Q 022625          168 ICPSE-----G-F-------------------------ISNAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGNARK--L  213 (294)
Q Consensus       168 i~~~~-----~-~-------------------------~~~~~~~~gv~-r~V~vSs~~~~~~~~~~~~~~~~~~~~--~  213 (294)
                      ||+++     + +                         +...+++.+.. +||++||..+..+......|..+|..-  +
T Consensus       102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~~l  181 (272)
T 2nwq_A          102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQF  181 (272)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHHHHHH
Confidence            99821     1 0                         11224455677 999999998876655555554443211  1


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCCc----ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcEEEEecCCc
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVCEISN  288 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~~~v~~g~~  288 (294)
                      .+.....+...|+++++|+||++........    ......-......++++|+|+++++++..+. ..+..+.+.++..
T Consensus       182 ~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~~~g~~i~v~~~~~  261 (272)
T 2nwq_A          182 SLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPVSQ  261 (272)
T ss_dssp             HHHHHTTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTE
T ss_pred             HHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHHHHhCCCccCccceEEEeeccC
Confidence            1111111223689999999998763221100    0000000011235799999999999998755 4577888887765


Q ss_pred             cc
Q 022625          289 LC  290 (294)
Q Consensus       289 ~~  290 (294)
                      .+
T Consensus       262 ~~  263 (272)
T 2nwq_A          262 SW  263 (272)
T ss_dssp             EE
T ss_pred             cC
Confidence            54

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.76  E-value=1.5e-17  Score=150.34  Aligned_cols=192  Identities=13%  Similarity=0.078  Sum_probs=128.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-----------cCCCcEEeecCCCCHHHHHHHhc--
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----------FGTYVESMAGDASNKKFLKTALR--  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~v~~v~~D~~d~~~l~~~l~--  162 (294)
                      .+.+|+|+||||+|+||++++++|+++|++|+++.|+.++....           .+..+.++.+|++|.++++++++  
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            45679999999999999999999999999999999997654321           23468899999999999888776  


Q ss_pred             -----CCcEEEEcCCc-----h---------------------HHhhh----hhcCCCEEEEecccccccCCCCchhccc
Q 022625          163 -----GVRSIICPSEG-----F---------------------ISNAG----SLKGVQHVILLSQLSVYRGSGGIQALMK  207 (294)
Q Consensus       163 -----~~d~Vi~~~~~-----~---------------------~~~~~----~~~gv~r~V~vSs~~~~~~~~~~~~~~~  207 (294)
                           .+|+|||+++.     +                     +.+++    .+.+.++||++||.. ..+......|..
T Consensus        95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y~~  173 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSGA  173 (303)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhhHH
Confidence                 48999998320     0                     11121    223457999999987 443333344433


Q ss_pred             hhHH--HHHHHHHHHHHhCCCCEEEEEccceecCC-CCCcc---e----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--
Q 022625          208 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTP-GGKQG---F----QFEEGCAANGSLSKEDAAFICVEALESIP--  275 (294)
Q Consensus       208 ~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~-~~~~~---~----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--  275 (294)
                      +|..  .+.+.....+...|+++++||||.+.... .....   .    .+........+.+++|+|+++++++..+.  
T Consensus       174 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~~~~  253 (303)
T 1yxm_A          174 ARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASF  253 (303)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCccccc
Confidence            3321  12222222233469999999999987321 11100   0    00011122346799999999999987543  


Q ss_pred             CCCcEEEEecCCc
Q 022625          276 QTGLIFEVCEISN  288 (294)
Q Consensus       276 ~~g~~~~v~~g~~  288 (294)
                      ..|+.|++.+|..
T Consensus       254 ~~G~~~~v~gG~~  266 (303)
T 1yxm_A          254 ITGQSVDVDGGRS  266 (303)
T ss_dssp             CCSCEEEESTTGG
T ss_pred             CCCcEEEECCCee
Confidence            5689999988854

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.76  E-value=1.5e-17  Score=148.70  Aligned_cols=181  Identities=19%  Similarity=0.128  Sum_probs=121.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--------CCCcEEeecCCCCHHHHHHHhc-----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|++++|++++..+..        +..+.++.+|++|.++++++++     
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999976544321        1357889999999998887775     


Q ss_pred             --CCcEEEEcCC-----ch-------------------------HHhhhhhcCC--CEEEEeccccccc--CCCCchhcc
Q 022625          163 --GVRSIICPSE-----GF-------------------------ISNAGSLKGV--QHVILLSQLSVYR--GSGGIQALM  206 (294)
Q Consensus       163 --~~d~Vi~~~~-----~~-------------------------~~~~~~~~gv--~r~V~vSs~~~~~--~~~~~~~~~  206 (294)
                        ++|+|||+++     .+                         +.+.+++.+.  ++||++||..++.  +......|.
T Consensus       109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~  188 (279)
T 1xg5_A          109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYS  188 (279)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHH
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhH
Confidence              7899999832     00                         2233455665  7999999998763  333344454


Q ss_pred             chhHH--HHHHHHHHHHH--hCCCCEEEEEccceecCCC----CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCC
Q 022625          207 KGNAR--KLAEQDESMLM--ASGIPYTIIRTGVLQNTPG----GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       207 ~~~~~--~~~~~ae~~l~--~~gl~~tivRPg~l~~~~~----~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      .+|..  .+.+.....+.  ..++++++|+||++.....    ...............+++++|+|+++++++..+..
T Consensus       189 ~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~~~~~  266 (279)
T 1xg5_A          189 ATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAH  266 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCHHHHHHHHHHHhcCCcc
Confidence            44331  11222223333  5789999999998763210    00000000111223568999999999999987653

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.76  E-value=3.2e-17  Score=147.17  Aligned_cols=193  Identities=16%  Similarity=0.110  Sum_probs=123.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-Cccchhhh------cCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R-~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ....+|+++||||+|+||++++++|+++|++|++++| +.+.+.+.      .+..+.++.+|++|.++++++++     
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE  104 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3456899999999999999999999999999999986 54433221      23578899999999988877765     


Q ss_pred             --CCcEEEEcCCc-------h-------------------------HHhhhhhcC---CCEEEEecccccccCCCCchhc
Q 022625          163 --GVRSIICPSEG-------F-------------------------ISNAGSLKG---VQHVILLSQLSVYRGSGGIQAL  205 (294)
Q Consensus       163 --~~d~Vi~~~~~-------~-------------------------~~~~~~~~g---v~r~V~vSs~~~~~~~~~~~~~  205 (294)
                        .+|++||+++.       +                         +...+.+.+   ..+||++||..+..+......|
T Consensus       105 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y  184 (280)
T 4da9_A          105 FGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDY  184 (280)
T ss_dssp             HSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHH
T ss_pred             cCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHH
Confidence              78999998321       0                         111233333   5699999999887665555566


Q ss_pred             cchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc----ceeecc-CCCCCCCcCHHHHHHHHHHHhhCCC--C
Q 022625          206 MKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GFQFEE-GCAANGSLSKEDAAFICVEALESIP--Q  276 (294)
Q Consensus       206 ~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~~~~~~-g~~~~~~Is~eDvA~~iv~aL~~~~--~  276 (294)
                      ..+|..  .+.+.....+...|++++.|+||.+........    ...+.. ......+.+++|+|+++++++....  .
T Consensus       185 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~i  264 (280)
T 4da9_A          185 CMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQFGFA  264 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHHTSTTGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCccccCC
Confidence            544431  122222233445789999999998763221110    000111 1222446789999999999998765  4


Q ss_pred             CCcEEEEecCC
Q 022625          277 TGLIFEVCEIS  287 (294)
Q Consensus       277 ~g~~~~v~~g~  287 (294)
                      .|+++++.+|-
T Consensus       265 tG~~i~vdGG~  275 (280)
T 4da9_A          265 TGSVIQADGGL  275 (280)
T ss_dssp             TTCEEEESTTC
T ss_pred             CCCEEEECCCc
Confidence            69999998874

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.76  E-value=3.1e-17  Score=146.84  Aligned_cols=192  Identities=11%  Similarity=0.035  Sum_probs=124.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      ...+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.   .+..+.++.+|++|.++++++++       .+|
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  104 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD  104 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            45679999999999999999999999999999999998765443   34578999999999999888776       789


Q ss_pred             EEEEcCC-----c-h-------------------------HHhhhhhcC--CCEEEEecccccccCCCCchhccchhHH-
Q 022625          166 SIICPSE-----G-F-------------------------ISNAGSLKG--VQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       166 ~Vi~~~~-----~-~-------------------------~~~~~~~~g--v~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      ++||+++     . +                         +...+++.+  -.+||++||..+..+..+...|..+|.. 
T Consensus       105 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~  184 (272)
T 4dyv_A          105 VLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAI  184 (272)
T ss_dssp             EEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHH
Confidence            9999822     1 0                         111233333  4699999999888776666666555432 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc--c-eeeccCCCCCCCcCHHHHHHHHHHHhhCCCC-CCcEEEEecC
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--G-FQFEEGCAANGSLSKEDAAFICVEALESIPQ-TGLIFEVCEI  286 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~--~-~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~-~g~~~~v~~g  286 (294)
                       .+.+.....+...|+++++|+||.+........  . ...........+.+++|+|+++++++..+.. ....+.+...
T Consensus       185 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~~~~i~i~~~  264 (272)
T 4dyv_A          185 TGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYMASLPLDANVQFMTIMAT  264 (272)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEEEECC------------------------CHHHHHHHHHHHHHSCTTSCCCEEEEEEC
T ss_pred             HHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhhhhcccccCCCCHHHHHHHHHHHhCCCCcCccceEEEecc
Confidence             122223333455799999999998763221110  0 0001112234467999999999999998764 3344444443


Q ss_pred             C
Q 022625          287 S  287 (294)
Q Consensus       287 ~  287 (294)
                      .
T Consensus       265 ~  265 (272)
T 4dyv_A          265 K  265 (272)
T ss_dssp             -
T ss_pred             C
Confidence            3

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.76  E-value=9.4e-18  Score=147.85  Aligned_cols=182  Identities=9%  Similarity=0.039  Sum_probs=118.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCC----cEEEEcCC--
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV----RSIICPSE--  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~----d~Vi~~~~--  172 (294)
                      +|+|+||||+|+||++++++|+++|++|++++|++++...      . +.+|++|.++++++++.+    |++||+++  
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~   73 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG   73 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCCC
Confidence            4789999999999999999999999999999999866432      1 678999999999988655    99999832  


Q ss_pred             c----h-----------------HHhhhhhcCCCEEEEeccccccc----------------------------CCCCch
Q 022625          173 G----F-----------------ISNAGSLKGVQHVILLSQLSVYR----------------------------GSGGIQ  203 (294)
Q Consensus       173 ~----~-----------------~~~~~~~~gv~r~V~vSs~~~~~----------------------------~~~~~~  203 (294)
                      .    +                 +...+++.+.++||++||..++.                            +.....
T Consensus        74 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (257)
T 1fjh_A           74 PQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNL  153 (257)
T ss_dssp             TTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHH
T ss_pred             CCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCcc
Confidence            1    1                 11223456778999999988762                            111222


Q ss_pred             hccchhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCc-ce----eecc--CCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          204 ALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GF----QFEE--GCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       204 ~~~~~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~~----~~~~--g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      .|..+|...  +.+.....+...|+++++|+||.+........ ..    .+..  ......+.+++|+|+++++++..+
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~  233 (257)
T 1fjh_A          154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPA  233 (257)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCCCHHHHHHHHHHHhCch
Confidence            332222211  11111222334799999999998763221110 00    0000  112234689999999999999765


Q ss_pred             --CCCCcEEEEecCC
Q 022625          275 --PQTGLIFEVCEIS  287 (294)
Q Consensus       275 --~~~g~~~~v~~g~  287 (294)
                        ...|+.|.+.+|.
T Consensus       234 ~~~~tG~~~~vdgG~  248 (257)
T 1fjh_A          234 ASYVHGAQIVIDGGI  248 (257)
T ss_dssp             GTTCCSCEEEESTTH
T ss_pred             hcCCcCCEEEECCCc
Confidence              3568999998874

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.76  E-value=1.2e-17  Score=149.53  Aligned_cols=194  Identities=13%  Similarity=0.092  Sum_probs=134.2

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch---hhh--cCCCcEEeecCCCCHHHHHHHhc------C
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA---MES--FGTYVESMAGDASNKKFLKTALR------G  163 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~---~~~--~~~~v~~v~~D~~d~~~l~~~l~------~  163 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|++...   .+.  .+..+.++.+|++|.++++++.+      +
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~  106 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRR  106 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence            456789999999999999999999999999999999775321   111  23468899999999988876654      6


Q ss_pred             CcEEEEcCCc-----h---------------------H----HhhhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          164 VRSIICPSEG-----F---------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       164 ~d~Vi~~~~~-----~---------------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      +|++||+++.     +                     +    ...+++.+..+||++||..++.+......|..+|..  
T Consensus       107 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~  186 (273)
T 3uf0_A          107 VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVV  186 (273)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHHH
T ss_pred             CcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHHH
Confidence            8999998321     0                     1    112345677899999999888776666666555432  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCC----Cc--ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQ--GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~----~~--~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                      .+.+.....+...|+++++|+||.+......    ..  ...+........+.+++|+|+++++++....  ..|+++++
T Consensus       187 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~~itG~~i~v  266 (273)
T 3uf0_A          187 GLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAV  266 (273)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCEEEE
Confidence            1222333334457999999999998632110    00  0001112233456789999999999887643  57999999


Q ss_pred             ecCCc
Q 022625          284 CEISN  288 (294)
Q Consensus       284 ~~g~~  288 (294)
                      .+|..
T Consensus       267 dGG~~  271 (273)
T 3uf0_A          267 DGGWL  271 (273)
T ss_dssp             STTGG
T ss_pred             CcCcc
Confidence            88753

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.75  E-value=7e-18  Score=149.79  Aligned_cols=190  Identities=14%  Similarity=0.093  Sum_probs=130.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.      .+..+.++.+|++|.++++++++       +
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4679999999999999999999999999999999997654332      13468889999999988877665       6


Q ss_pred             CcEEEEcCC---c---h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH-
Q 022625          164 VRSIICPSE---G---F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       164 ~d~Vi~~~~---~---~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      +|++||+++   .   +                         +...+.+.+..+||++||..+..+......|..+|.. 
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  164 (262)
T 1zem_A           85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAI  164 (262)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHHH
Confidence            899999832   0   0                         1112334567899999998877665555566554431 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCC-----------------cc-e--eeccCCCCCCCcCHHHHHHHHHHH
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-----------------QG-F--QFEEGCAANGSLSKEDAAFICVEA  270 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-----------------~~-~--~~~~g~~~~~~Is~eDvA~~iv~a  270 (294)
                       .+.+.....+...|+++++|+||++.......                 .. .  .+........+.+++|+|++++++
T Consensus       165 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l  244 (262)
T 1zem_A          165 IALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFL  244 (262)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence             12233333445679999999999875321000                 00 0  000111223456899999999999


Q ss_pred             hhCCC--CCCcEEEEecC
Q 022625          271 LESIP--QTGLIFEVCEI  286 (294)
Q Consensus       271 L~~~~--~~g~~~~v~~g  286 (294)
                      +..+.  ..|+.+.+.+|
T Consensus       245 ~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          245 LGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HSGGGTTCCSCEEEESCC
T ss_pred             cCchhcCcCCcEEecCCC
Confidence            87543  46889888765

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.75  E-value=1.3e-17  Score=147.28  Aligned_cols=186  Identities=13%  Similarity=0.117  Sum_probs=123.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--------C-CCcEEeecCCCCHHHHHHHhc-----
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------G-TYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~-~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ..+|+++||||+|+||++++++|+++|++|+++.|+.+++.+..        . ..+.++.+|++|.++++++++     
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            46799999999999999999999999999999999987644321        2 468899999999988887765     


Q ss_pred             --CCcEEEEcCCc------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 --GVRSIICPSEG------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 --~~d~Vi~~~~~------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                        .+|++||+++-            +                 +...+++.+..+||++||..+..+..+...|..+|..
T Consensus        85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  164 (250)
T 3nyw_A           85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFA  164 (250)
T ss_dssp             HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHHH
Confidence              57999998321            0                 1112345677899999998876644444555444431


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCC---CCcEEEEecC
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ---TGLIFEVCEI  286 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~---~g~~~~v~~g  286 (294)
                        .+.+.....+...|++++.|+||++......    ..........+++++|+|+++++++..+..   .+..+.+.++
T Consensus       165 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~----~~~~~~~~~~~~~p~dva~~v~~l~s~~~~~~~~~~~i~vd~~  240 (250)
T 3nyw_A          165 LLGLAESLYRELAPLGIRVTTLCPGWVNTDMAK----KAGTPFKDEEMIQPDDLLNTIRCLLNLSENVCIKDIVFEMKKS  240 (250)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHH----HTTCCSCGGGSBCHHHHHHHHHHHHTSCTTEECCEEEEEEHHH
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEecCcccCchhh----hcCCCcccccCCCHHHHHHHHHHHHcCCCceEeeEEEEEeecc
Confidence              1222333334557999999999997621110    001112224578999999999999987652   3455555544

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.75  E-value=1.4e-17  Score=147.48  Aligned_cols=192  Identities=17%  Similarity=0.105  Sum_probs=127.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      ..+|+++||||+|+||++++++|+++|++|+++.|+.+...+.       .+..++++.+|++|.++++++++       
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            3578999999999999999999999999999998876442211       22468999999999999888776       


Q ss_pred             CCcEEEEcCC--c-----h---------------------HHh----hhhhcCCCEEEEecccccc--cCCCCchhccch
Q 022625          163 GVRSIICPSE--G-----F---------------------ISN----AGSLKGVQHVILLSQLSVY--RGSGGIQALMKG  208 (294)
Q Consensus       163 ~~d~Vi~~~~--~-----~---------------------~~~----~~~~~gv~r~V~vSs~~~~--~~~~~~~~~~~~  208 (294)
                      .+|++||+++  .     +                     +.+    .+++.+..+||++||..+.  .+......|..+
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~as  164 (264)
T 3i4f_A           85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAA  164 (264)
T ss_dssp             CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHH
T ss_pred             CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHH
Confidence            7899999843  1     0                     111    2356677899999988544  222333445443


Q ss_pred             hHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       209 ~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      |..  .+.+.....+...|+++++|+||.+.........    ..+........+.+++|+|+++++++..+.  ..|++
T Consensus       165 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~  244 (264)
T 3i4f_A          165 KVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMITGTI  244 (264)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCCCCcE
Confidence            321  1222222333457999999999998632211110    001112223446789999999999997654  46999


Q ss_pred             EEEecCCc
Q 022625          281 FEVCEISN  288 (294)
Q Consensus       281 ~~v~~g~~  288 (294)
                      +++.+|-.
T Consensus       245 i~vdGG~~  252 (264)
T 3i4f_A          245 IEVTGAVD  252 (264)
T ss_dssp             EEESCSCC
T ss_pred             EEEcCcee
Confidence            99988743

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.75  E-value=5.4e-17  Score=142.90  Aligned_cols=178  Identities=13%  Similarity=0.110  Sum_probs=122.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+++++.+.      .+..+.++.+|++|.++++++++       +
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999999999999999999997664432      13468889999999988887765       6


Q ss_pred             CcEEEEcCC----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          164 VRSIICPSE----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       164 ~d~Vi~~~~----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      +|++||+++    + +                         +...+.+.+ .+||++||..+..+......|..+|..  
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~  163 (247)
T 2jah_A           85 LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVN  163 (247)
T ss_dssp             CSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHHHH
Confidence            899999722    0 0                         111234456 899999999887665555566554431  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc-eee---ccCC-CCCCCcCHHHHHHHHHHHhhCCC
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG-FQF---EEGC-AANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~-~~~---~~g~-~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      .+.+.....+...|+++++|+||++......... ...   .... ....+++++|+|+++++++..+.
T Consensus       164 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          164 AFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQAQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHHTTTSCCBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhcccccCCCCHHHHHHHHHHHhCCCc
Confidence            2233334445568999999999997632211000 000   0000 11124899999999999998754

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.75  E-value=9.9e-18  Score=149.53  Aligned_cols=189  Identities=13%  Similarity=0.054  Sum_probs=131.7

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-------CCcEE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSI  167 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-------~~d~V  167 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+.+....     ...+.+|++|.+++.++++       .+|++
T Consensus        24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-----~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~l   98 (266)
T 3uxy_A           24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-----DLHLPGDLREAAYADGLPGAVAAGLGRLDIV   98 (266)
T ss_dssp             --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-----SEECCCCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-----hhccCcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            45678999999999999999999999999999999998765432     2456899999988776654       68999


Q ss_pred             EEcCCc-----h---------------------HH----hhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHH
Q 022625          168 ICPSEG-----F---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE  215 (294)
Q Consensus       168 i~~~~~-----~---------------------~~----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~  215 (294)
                      ||+++.     +                     +.    ..+++.+..+||++||..++.+......|..+|..  .+.+
T Consensus        99 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~  178 (266)
T 3uxy_A           99 VNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQ  178 (266)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHHHHH
Confidence            998321     0                     11    12355677899999999888776666666555432  1222


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCC------CCcc-----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEE
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPG------GKQG-----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE  282 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~------~~~~-----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~  282 (294)
                      .....+...|+++++|+||.+.....      ....     ..+........+.+++|+|+++++++..+.  ..|++++
T Consensus       179 ~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~  258 (266)
T 3uxy_A          179 CMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVE  258 (266)
T ss_dssp             HHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEE
Confidence            23333445799999999998762110      0000     111222333556799999999999997654  4699999


Q ss_pred             EecCCc
Q 022625          283 VCEISN  288 (294)
Q Consensus       283 v~~g~~  288 (294)
                      +.+|..
T Consensus       259 vdGG~~  264 (266)
T 3uxy_A          259 VNGGKA  264 (266)
T ss_dssp             ESTTCC
T ss_pred             ECcCEe
Confidence            988753

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.75  E-value=1.3e-16  Score=138.92  Aligned_cols=182  Identities=10%  Similarity=0.013  Sum_probs=122.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh-------hcCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      +|+++||||+|+||++++++|+++|++|+++.|+.+++.+       ..+..+.++.+|++|.++++++++       .+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999999876433       224578899999999999988876       67


Q ss_pred             cEEEEcCCc-----h---------------------HHhhhh---hcCCCEEEEecccccccCCCCchhccchhHHHHHH
Q 022625          165 RSIICPSEG-----F---------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE  215 (294)
Q Consensus       165 d~Vi~~~~~-----~---------------------~~~~~~---~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~  215 (294)
                      |++||+++-     +                     +.+++.   +.+..++|++||.....+......|..+|.... .
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~-~  160 (235)
T 3l77_A           82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAAR-A  160 (235)
T ss_dssp             SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHH-H
T ss_pred             CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHH-H
Confidence            999998220     0                     111111   223467888887766655444445544433111 1


Q ss_pred             HHHH-HHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCC--CCcEEEEec
Q 022625          216 QDES-MLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ--TGLIFEVCE  285 (294)
Q Consensus       216 ~ae~-~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~--~g~~~~v~~  285 (294)
                      ..+. .+...+++++.|+||.+.........    .......+++++|+|+++++++..+..  .+++....+
T Consensus       161 ~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~----~~~~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~~  229 (235)
T 3l77_A          161 LVRTFQIENPDVRFFELRPGAVDTYFGGSKP----GKPKEKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRSV  229 (235)
T ss_dssp             HHHHHHHHCTTSEEEEEEECSBSSSTTTCCS----CCCGGGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECCT
T ss_pred             HHHHHhhcCCCeEEEEEeCCccccccccccC----CcccccCCCCHHHHHHHHHHHHcCCCCCccceEEEeec
Confidence            1111 12346899999999998633221111    111223568999999999999988763  344444433

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.75  E-value=4.5e-17  Score=144.86  Aligned_cols=193  Identities=12%  Similarity=0.093  Sum_probs=133.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cC-CCcEEeecCCCCHHHHHHHhc-----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~-~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      .+.+|+++||||+++||++++++|+++|++|+++.|+.+++.+.       .+ ..+.++.+|++|.++++++++     
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT   84 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999998764332       22 248899999999988877664     


Q ss_pred             --CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 --GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 --~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                        .+|++||+++.     +                         +...+++.+..+||++||..+..+......|..+|.
T Consensus        85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  164 (265)
T 3lf2_A           85 LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARA  164 (265)
T ss_dssp             HCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHH
Confidence              57999998321     0                         111234456679999999988877666666655443


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCC----C---Cccee---e----c--cCCCCCCCcCHHHHHHHHHHHhh
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPG----G---KQGFQ---F----E--EGCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~----~---~~~~~---~----~--~g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                      .  .+.+.....+...|++++.|+||.+.....    .   .....   +    .  .......+.+++|+|+++++++.
T Consensus       165 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s  244 (265)
T 3lf2_A          165 GVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLAS  244 (265)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHHHhC
Confidence            1  122333333455799999999998762110    0   00000   0    0  00223446789999999999887


Q ss_pred             CCC--CCCcEEEEecCCc
Q 022625          273 SIP--QTGLIFEVCEISN  288 (294)
Q Consensus       273 ~~~--~~g~~~~v~~g~~  288 (294)
                      ...  ..|+++.+.+|-.
T Consensus       245 ~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          245 PLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             GGGTTCCSEEEEESSSCC
T ss_pred             chhcCcCCCEEEECCCCc
Confidence            543  5799999988753

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.75  E-value=3.3e-17  Score=148.13  Aligned_cols=193  Identities=17%  Similarity=0.187  Sum_probs=131.7

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc--chhh------hcCCCcEEeecCCCCHHHHHHHhc----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NAME------SFGTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~--~~~~------~~~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+.+  ....      ..+..+.++.+|++|.++++++++    
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999988733  1111      124578899999999988877664    


Q ss_pred             ---CCcEEEEcCC-----c-h---------------------HHhhhhhcC--CCEEEEecccccccCCCCchhccchhH
Q 022625          163 ---GVRSIICPSE-----G-F---------------------ISNAGSLKG--VQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 ---~~d~Vi~~~~-----~-~---------------------~~~~~~~~g--v~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                         ++|++||+++     + +                     +.+++...-  -.+||++||..++.+......|..+|.
T Consensus       125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  204 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKA  204 (294)
T ss_dssp             HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHHHHH
Confidence               6799999822     1 0                     112222221  259999999988877666666655543


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCC----C-C-CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTP----G-G-KQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~----~-~-~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      .  .+.+.....+...|+++++|+||.+....    . . .....+........+.+++|+|+++++++....  ..|++
T Consensus       205 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~  284 (294)
T 3r3s_A          205 AILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEV  284 (294)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCE
Confidence            2  12222333345579999999999876311    0 0 000111122233456789999999999887543  57999


Q ss_pred             EEEecCC
Q 022625          281 FEVCEIS  287 (294)
Q Consensus       281 ~~v~~g~  287 (294)
                      ++|.+|.
T Consensus       285 i~vdGG~  291 (294)
T 3r3s_A          285 HGVCGGE  291 (294)
T ss_dssp             EEESTTC
T ss_pred             EEECCCc
Confidence            9998875

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.75  E-value=3.6e-17  Score=144.28  Aligned_cols=189  Identities=13%  Similarity=0.080  Sum_probs=127.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcEEEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSIIC  169 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi~  169 (294)
                      |+++||||+|+||++++++|+++|++|+++.|+++++.+.   .+..+.++.+|++|.++++++++       ++|++||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            6899999999999999999999999999999998765432   23468899999999999998876       5699999


Q ss_pred             cCC-----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HHHH
Q 022625          170 PSE-----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQ  216 (294)
Q Consensus       170 ~~~-----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~  216 (294)
                      +++     + +                         +...+++.+..+||++||..+..+..+...|..+|..-  +.+.
T Consensus        81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~  160 (248)
T 3asu_A           81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN  160 (248)
T ss_dssp             CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHHHHH
Confidence            832     1 1                         11123355778999999998876655555665444311  1122


Q ss_pred             HHHHHHhCCCCEEEEEcccee-cCCCCCc----ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcEEEEecCCc
Q 022625          217 DESMLMASGIPYTIIRTGVLQ-NTPGGKQ----GFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVCEISN  288 (294)
Q Consensus       217 ae~~l~~~gl~~tivRPg~l~-~~~~~~~----~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~~~v~~g~~  288 (294)
                      ....+...|+++++|+||++. .......    ......-......++++|+|+++++++.++. ..+..+.+..+.+
T Consensus       161 la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~~~~~~g~~i~v~~~~~  238 (248)
T 3asu_A          161 LRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQ  238 (248)
T ss_dssp             HHHHTTTSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHHHHHHSCTTCCCCEEEECCTTC
T ss_pred             HHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHHHhcCCccceeeEEEEccccc
Confidence            222233468999999999986 2221100    0000000011234799999999999998764 4677888776544

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.75  E-value=2e-17  Score=149.40  Aligned_cols=193  Identities=17%  Similarity=0.173  Sum_probs=133.7

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh-------hcCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+.+...+       ..+..+.++.+|++|.++++++++     
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999998754221       123478899999999988887775     


Q ss_pred             --CCcEEEEcCC-----c-h---------------------HHhhhhhc--CCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 --GVRSIICPSE-----G-F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 --~~d~Vi~~~~-----~-~---------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                        .+|++||+++     . +                     +.+++...  ...+||++||..++.+......|..+|..
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  202 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGA  202 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHHHH
Confidence              6799999822     1 0                     11122221  23599999999887766666666554432


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCC----C-CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEE
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPG----G-KQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE  282 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~----~-~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~  282 (294)
                        .+.+.....+...|+++++|+||.+.....    . .....+........+.+++|+|+++++++....  ..|++++
T Consensus       203 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~  282 (291)
T 3ijr_A          203 IVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIH  282 (291)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCCcCCEEE
Confidence              122223333445799999999999873210    0 000111223334556789999999999987643  5799999


Q ss_pred             EecCC
Q 022625          283 VCEIS  287 (294)
Q Consensus       283 v~~g~  287 (294)
                      +.+|-
T Consensus       283 vdGG~  287 (291)
T 3ijr_A          283 VNGGV  287 (291)
T ss_dssp             ESSSC
T ss_pred             ECCCc
Confidence            98874

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.75  E-value=6.1e-17  Score=144.82  Aligned_cols=193  Identities=12%  Similarity=0.043  Sum_probs=132.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-------------ccchhh------hcCCCcEEeecCCCCHHH
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-------------KRNAME------SFGTYVESMAGDASNKKF  156 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~-------------~~~~~~------~~~~~v~~v~~D~~d~~~  156 (294)
                      .+.+|+++||||+++||++++++|+++|++|+++.|+             .+++.+      ..+..+.++.+|++|.++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            4578999999999999999999999999999999984             322221      123468899999999998


Q ss_pred             HHHHhc-------CCcEEEEcCC-----ch---------------------H----HhhhhhcC-CCEEEEecccccccC
Q 022625          157 LKTALR-------GVRSIICPSE-----GF---------------------I----SNAGSLKG-VQHVILLSQLSVYRG  198 (294)
Q Consensus       157 l~~~l~-------~~d~Vi~~~~-----~~---------------------~----~~~~~~~g-v~r~V~vSs~~~~~~  198 (294)
                      ++++++       .+|++||+++     .+                     +    ...+.+.+ -.+||++||..+..+
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  167 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM  167 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC
Confidence            887765       5799999832     00                     1    11233333 569999999988777


Q ss_pred             CCCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCC-------------cc-eeeccCCCCCCCcCHHH
Q 022625          199 SGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-------------QG-FQFEEGCAANGSLSKED  262 (294)
Q Consensus       199 ~~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-------------~~-~~~~~g~~~~~~Is~eD  262 (294)
                      ......|..+|..  .+.+.....+...|++++.|+||++.......             .. ...........+.+++|
T Consensus       168 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~ped  247 (277)
T 3tsc_A          168 QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPED  247 (277)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSCSCBCHHH
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCCCCCCHHH
Confidence            6666666555432  12233333345579999999999976322110             00 00001111124678999


Q ss_pred             HHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          263 AAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       263 vA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      +|+++++++.++.  ..|+++++.+|..
T Consensus       248 vA~~v~~L~s~~~~~itG~~i~vdGG~~  275 (277)
T 3tsc_A          248 IADTVCWLASDESRKVTAAQIPVDQGST  275 (277)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHhCccccCCcCCEEeeCCCcc
Confidence            9999999997654  5799999988854

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.75  E-value=4.1e-17  Score=144.48  Aligned_cols=192  Identities=13%  Similarity=0.133  Sum_probs=132.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+.   .+..+.++.+|++|.++++++++       .+|
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID   84 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            35689999999999999999999999999999999998765443   23468899999999988876654       679


Q ss_pred             EEEEcCC-----ch---------------------HHhhhhhc--CCCEEEEecccccccCCCCchhccchhHH--HHHH
Q 022625          166 SIICPSE-----GF---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE  215 (294)
Q Consensus       166 ~Vi~~~~-----~~---------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~  215 (294)
                      ++||+++     .+                     +.+++...  .-.+||++||..+..+..+...|..+|..  .+.+
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  164 (255)
T 4eso_A           85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFAS  164 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHH
Confidence            9999832     10                     11122111  12589999999888766666666554432  1222


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCCCCcce----------eeccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcEEEEe
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPGGKQGF----------QFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVC  284 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~----------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~~~v~  284 (294)
                      .....+...|++++.|+||.+..........          .+........+.+++|+|+++++++.... ..|+.+++.
T Consensus       165 ~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~itG~~i~vd  244 (255)
T 4eso_A          165 VLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFEATFTTGAKLAVD  244 (255)
T ss_dssp             HHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHTCTTCCSCEEEES
T ss_pred             HHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCcCcCccCCEEEEC
Confidence            2223334469999999999987322111000          00011223445689999999999887632 479999998


Q ss_pred             cCC
Q 022625          285 EIS  287 (294)
Q Consensus       285 ~g~  287 (294)
                      +|-
T Consensus       245 GG~  247 (255)
T 4eso_A          245 GGL  247 (255)
T ss_dssp             TTT
T ss_pred             CCc
Confidence            884

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.75  E-value=7.4e-17  Score=144.82  Aligned_cols=192  Identities=13%  Similarity=0.021  Sum_probs=132.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc----------------cchhhh------cCCCcEEeecCCCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK----------------RNAMES------FGTYVESMAGDASN  153 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~----------------~~~~~~------~~~~v~~v~~D~~d  153 (294)
                      .+.+|+++||||+++||++++++|+++|++|++++|+.                +++.+.      .+..+.++.+|++|
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   87 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD   87 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence            45789999999999999999999999999999999872                222211      23468899999999


Q ss_pred             HHHHHHHhc-------CCcEEEEcCC-----c-h---------------------H----HhhhhhcC-CCEEEEecccc
Q 022625          154 KKFLKTALR-------GVRSIICPSE-----G-F---------------------I----SNAGSLKG-VQHVILLSQLS  194 (294)
Q Consensus       154 ~~~l~~~l~-------~~d~Vi~~~~-----~-~---------------------~----~~~~~~~g-v~r~V~vSs~~  194 (294)
                      .++++++++       .+|++||+++     . +                     +    ...+.+.+ ..+||++||..
T Consensus        88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (286)
T 3uve_A           88 YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG  167 (286)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchh
Confidence            998887775       6799999822     1 1                     1    11233333 56999999998


Q ss_pred             cccCCCCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc-----------ee--------eccCCC
Q 022625          195 VYRGSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG-----------FQ--------FEEGCA  253 (294)
Q Consensus       195 ~~~~~~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~-----------~~--------~~~g~~  253 (294)
                      +..+......|..+|..  .+.+.....+...|++++.|+||++.........           ..        ......
T Consensus       168 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (286)
T 3uve_A          168 GLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTL  247 (286)
T ss_dssp             GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCSS
T ss_pred             hccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhhcc
Confidence            88776666666555431  1223333344557999999999998733211100           00        001111


Q ss_pred             CCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          254 ANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       254 ~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      ...+.+++|+|+++++++....  ..|++++|.+|-
T Consensus       248 p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~  283 (286)
T 3uve_A          248 PIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGS  283 (286)
T ss_dssp             SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcc
Confidence            2556799999999999987643  469999998874

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.75  E-value=4.2e-17  Score=144.74  Aligned_cols=192  Identities=15%  Similarity=0.094  Sum_probs=137.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      ++.+|+++||||+++||+++++.|+++|++|++..|+++++.+.      .+.++..+++|++|+++++++++       
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999998765432      23468889999999988877664       


Q ss_pred             CCcEEEEcCC---c---h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH-
Q 022625          163 GVRSIICPSE---G---F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-  210 (294)
Q Consensus       163 ~~d~Vi~~~~---~---~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~-  210 (294)
                      ..|++||+++   .   +                         +...+++.+-.+||++||..+..+......|..+|. 
T Consensus        84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaa  163 (254)
T 4fn4_A           84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHG  163 (254)
T ss_dssp             CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHH
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHH
Confidence            5699999832   1   1                         122356667789999999988776666666655543 


Q ss_pred             -HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce-------eeccC-CCCCCCcCHHHHHHHHHHHhhCCC--CCCc
Q 022625          211 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF-------QFEEG-CAANGSLSKEDAAFICVEALESIP--QTGL  279 (294)
Q Consensus       211 -~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~-------~~~~g-~~~~~~Is~eDvA~~iv~aL~~~~--~~g~  279 (294)
                       ..+.+.....+...||+++.|.||++..........       .+... ....-+-.++|+|.++++++.+..  ..|+
T Consensus       164 l~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~iTG~  243 (254)
T 4fn4_A          164 LIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNGD  243 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence             234445555566789999999999876321111000       00000 011234579999999999887654  4789


Q ss_pred             EEEEecCC
Q 022625          280 IFEVCEIS  287 (294)
Q Consensus       280 ~~~v~~g~  287 (294)
                      .+.|.+|-
T Consensus       244 ~i~VDGG~  251 (254)
T 4fn4_A          244 AVVVDGGL  251 (254)
T ss_dssp             EEEESTTG
T ss_pred             EEEeCCCc
Confidence            99998774

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.75  E-value=4.1e-17  Score=145.94  Aligned_cols=186  Identities=11%  Similarity=0.069  Sum_probs=125.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh-------------hcCCCcEEeecCCCCHHHHHHHhc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------------SFGTYVESMAGDASNKKFLKTALR  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~-------------~~~~~v~~v~~D~~d~~~l~~~l~  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.++..+             ..+..+.++.+|++|.++++++++
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   82 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA   82 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            4568999999999999999999999999999999998764211             113467889999999988887765


Q ss_pred             -------CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccC--CCCch
Q 022625          163 -------GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRG--SGGIQ  203 (294)
Q Consensus       163 -------~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~--~~~~~  203 (294)
                             .+|++||+++.     +                         +...+++.+..+||++||..+..+  .....
T Consensus        83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~  162 (274)
T 3e03_A           83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHT  162 (274)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCH
T ss_pred             HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCc
Confidence                   67999998321     0                         111244556789999999876654  22333


Q ss_pred             hccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCc
Q 022625          204 ALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGL  279 (294)
Q Consensus       204 ~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~  279 (294)
                      .|..+|..  .+.+.....+...|++++.|+||.+.+.+...    ...+.......+++|+|+++++++....  ..|+
T Consensus       163 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~----~~~~~~~~~~~~pedvA~~v~~l~s~~~~~itG~  238 (274)
T 3e03_A          163 GYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAIN----MLPGVDAAACRRPEIMADAAHAVLTREAAGFHGQ  238 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------CCCGGGSBCTHHHHHHHHHHHTSCCTTCCSC
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhh----hcccccccccCCHHHHHHHHHHHhCccccccCCe
Confidence            45444321  12233333445579999999999544232211    1111222346789999999999997654  3678


Q ss_pred             EEEEecC
Q 022625          280 IFEVCEI  286 (294)
Q Consensus       280 ~~~v~~g  286 (294)
                      .+ +.+|
T Consensus       239 ~i-~~~g  244 (274)
T 3e03_A          239 FL-IDDE  244 (274)
T ss_dssp             EE-EHHH
T ss_pred             EE-EcCc
Confidence            77 5444

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.75  E-value=1.4e-17  Score=147.00  Aligned_cols=188  Identities=9%  Similarity=0.029  Sum_probs=129.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCC--CCHHHHHHHhc----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDA--SNKKFLKTALR----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~--~d~~~l~~~l~----  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+.       ....+.++.+|+  +|.++++++++    
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998764432       123688999999  89988877765    


Q ss_pred             ---CCcEEEEcCCc------h---------------------H----HhhhhhcCCCEEEEecccccccCCCCchhccch
Q 022625          163 ---GVRSIICPSEG------F---------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       163 ---~~d~Vi~~~~~------~---------------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                         .+|++||+++.      +                     +    ...+++.+..+||++||..+..+......|..+
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  168 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAAS  168 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHH
Confidence               67999998321      0                     1    112355677899999999887766665666544


Q ss_pred             hHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       209 ~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                      |..-  +.+.....+. ..++++.|+||++......    ..........+.+++|+|.++++++....  ..|+.+++.
T Consensus       169 K~a~~~l~~~la~e~~-~~irvn~v~PG~v~t~~~~----~~~~~~~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vd  243 (252)
T 3f1l_A          169 KFATEGMMQVLADEYQ-QRLRVNCINPGGTRTAMRA----SAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQ  243 (252)
T ss_dssp             HHHHHHHHHHHHHHTT-TTCEEEEEECCSBSSHHHH----HHCTTCCGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESS
T ss_pred             HHHHHHHHHHHHHHhc-CCcEEEEEecCcccCchhh----hhCCccchhccCCHHHHHHHHHHHcCccccCCCCCEEEeC
Confidence            4311  1111111122 2399999999987621100    00111222346789999999999987654  568999998


Q ss_pred             cCCc
Q 022625          285 EISN  288 (294)
Q Consensus       285 ~g~~  288 (294)
                      +|..
T Consensus       244 gG~~  247 (252)
T 3f1l_A          244 PGRK  247 (252)
T ss_dssp             CC--
T ss_pred             CCcC
Confidence            8854

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.75  E-value=1.5e-17  Score=147.97  Aligned_cols=191  Identities=15%  Similarity=0.127  Sum_probs=129.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+++++.+.   ....+.++.+|++|.++++++++       .+|+
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            4679999999999999999999999999999999998765443   22468889999999998887765       4699


Q ss_pred             EEEcCCc-----h---------------------HHhhhhhc--CCCEEEEecccccccCCCCchhccchhH--HHHHHH
Q 022625          167 IICPSEG-----F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQ  216 (294)
Q Consensus       167 Vi~~~~~-----~---------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~~  216 (294)
                      +||+++.     +                     +.+++...  ...+||++||..++ +......|..+|.  ..+.+.
T Consensus        84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~~~~  162 (263)
T 2a4k_A           84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLART  162 (263)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHHHHCSSHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCCcHHHHHHHHHHHHHHHH
Confidence            9998220     0                     11122111  14699999999877 3333334444432  112233


Q ss_pred             HHHHHHhCCCCEEEEEccceecCCCCCcce----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          217 DESMLMASGIPYTIIRTGVLQNTPGGKQGF----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       217 ae~~l~~~gl~~tivRPg~l~~~~~~~~~~----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      ....+...|+++++|+||.+..........    .+........+.+++|+|+++++++..+.  ..|+.+.+.+|..
T Consensus       163 la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~  240 (263)
T 2a4k_A          163 LALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRS  240 (263)
T ss_dssp             HHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCcc
Confidence            333345579999999999976322111000    01111222456899999999999987643  4689999988743

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.75  E-value=1e-17  Score=151.09  Aligned_cols=197  Identities=12%  Similarity=0.074  Sum_probs=136.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEEcCccchhhhc--------CCCcEEeecCCCCHHHHHHHhc--
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR--  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~l~--  162 (294)
                      .+.+|+++||||+|+||++++++|+++|+   +|+++.|+.+++.+..        +..+.++.+|++|.++++++++  
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            45689999999999999999999999998   9999999987654321        3468889999999999988876  


Q ss_pred             -----CCcEEEEcCC-----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhcc
Q 022625          163 -----GVRSIICPSE-----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALM  206 (294)
Q Consensus       163 -----~~d~Vi~~~~-----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~  206 (294)
                           .+|++||+++     + +                         +...+++.+..+||++||..+..+......|.
T Consensus       110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~  189 (287)
T 3rku_A          110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYC  189 (287)
T ss_dssp             CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHH
Confidence                 4699999822     1 0                         11123556778999999998877666666665


Q ss_pred             chhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCC----CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCC--CC
Q 022625          207 KGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ--TG  278 (294)
Q Consensus       207 ~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~----~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~--~g  278 (294)
                      .+|..  .+.+.....+...|++++.|+||++.....    ................++++|+|+++++++..+..  .+
T Consensus       190 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v~~l~s~~~~~i~g  269 (287)
T 3rku_A          190 ASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATSRKQNTVIA  269 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHHHHHHHHTSCTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCCHHHHHHHHHHHhCCCCCeEec
Confidence            54431  122222223344799999999999873210    00000000001112345899999999999987653  58


Q ss_pred             cEEEEecCCccccc
Q 022625          279 LIFEVCEISNLCEQ  292 (294)
Q Consensus       279 ~~~~v~~g~~~~~e  292 (294)
                      +++.+.+|......
T Consensus       270 ~~i~v~~g~~~p~~  283 (287)
T 3rku_A          270 DTLIFPTNQASPHH  283 (287)
T ss_dssp             EEEEEETTEEETTE
T ss_pred             ceEEeeCCCCCCcc
Confidence            89999888766543

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.75  E-value=1.6e-17  Score=148.32  Aligned_cols=191  Identities=10%  Similarity=-0.007  Sum_probs=129.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhcC------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALRG------  163 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~~------  163 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.++....      .+..+.++.+|++|.++++++++.      
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG  110 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999999987654322      234688999999999988887754      


Q ss_pred             -CcEEEEcCC----------ch----------------------HHhhhhhcCCCEEEEecccccccC--CCCchhccch
Q 022625          164 -VRSIICPSE----------GF----------------------ISNAGSLKGVQHVILLSQLSVYRG--SGGIQALMKG  208 (294)
Q Consensus       164 -~d~Vi~~~~----------~~----------------------~~~~~~~~gv~r~V~vSs~~~~~~--~~~~~~~~~~  208 (294)
                       +|+|||+++          ..                      +.+.+++.+.++||++||..+..+  ......|..+
T Consensus       111 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~s  190 (279)
T 3ctm_A          111 TIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTA  190 (279)
T ss_dssp             CCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHH
T ss_pred             CCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHH
Confidence             899999821          10                      122345567899999999887655  4444455443


Q ss_pred             hHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          209 NARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       209 ~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      |...  +.+.....+...+ ++++|+||.+.........    ..+........+++++|+|+++++++..+.  ..|+.
T Consensus       191 K~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~  269 (279)
T 3ctm_A          191 KAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLASNASTFTTGSD  269 (279)
T ss_dssp             HHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCccccCccCCE
Confidence            3211  1111111122357 9999999998633221100    001111122347899999999999987643  57899


Q ss_pred             EEEecCC
Q 022625          281 FEVCEIS  287 (294)
Q Consensus       281 ~~v~~g~  287 (294)
                      +++.+|.
T Consensus       270 i~vdgG~  276 (279)
T 3ctm_A          270 VVIDGGY  276 (279)
T ss_dssp             EEESTTC
T ss_pred             EEECCCe
Confidence            9998874

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.74  E-value=2.5e-17  Score=144.10  Aligned_cols=172  Identities=13%  Similarity=0.141  Sum_probs=117.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI  167 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~V  167 (294)
                      .+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.   .+.++.++.+|++|.++++++++       .+|++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            468999999999999999999999999999999998765432   23368899999999988887765       56999


Q ss_pred             EEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HHH
Q 022625          168 ICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAE  215 (294)
Q Consensus       168 i~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~  215 (294)
                      ||+++.     +                         +...+++.+ .+||++||..+..+......|..+|..-  +.+
T Consensus        82 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  160 (235)
T 3l6e_A           82 LHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGFLE  160 (235)
T ss_dssp             EEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHHHHHH
Confidence            998321     0                         111123333 3999999988877666666665544321  222


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      .....+...|++++.|+||.+........     .......+.+++|+|+.+++++..+.
T Consensus       161 ~la~e~~~~gi~v~~v~PG~v~T~~~~~~-----~~~~~~~~~~pedvA~~v~~l~~~~~  215 (235)
T 3l6e_A          161 SLRAELKDSPLRLVNLYPSGIRSEFWDNT-----DHVDPSGFMTPEDAAAYMLDALEARS  215 (235)
T ss_dssp             HHHHHTTTSSEEEEEEEEEEECCCC----------------CBCHHHHHHHHHHHTCCCS
T ss_pred             HHHHHhhccCCEEEEEeCCCccCcchhcc-----CCCCCcCCCCHHHHHHHHHHHHhCCC
Confidence            22223345789999999998863221111     01122357899999999999997654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.74  E-value=1.7e-17  Score=146.32  Aligned_cols=190  Identities=12%  Similarity=0.086  Sum_probs=125.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCccc--hhhh---c-CCCcEEeecCCCCH-HHHHHHhc------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN--AMES---F-GTYVESMAGDASNK-KFLKTALR------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~-V~~~~R~~~~--~~~~---~-~~~v~~v~~D~~d~-~~l~~~l~------  162 (294)
                      +.+|+++||||+|+||++++++|+++|++ |+++.|+.+.  ..+.   . +..++++.+|++|. ++++++++      
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            46799999999999999999999999997 9999998632  2211   1 23678899999997 77776665      


Q ss_pred             -CCcEEEEcCC-----ch-------------HHhh----hhhcC---CCEEEEecccccccCCCCchhccchhHHH--HH
Q 022625          163 -GVRSIICPSE-----GF-------------ISNA----GSLKG---VQHVILLSQLSVYRGSGGIQALMKGNARK--LA  214 (294)
Q Consensus       163 -~~d~Vi~~~~-----~~-------------~~~~----~~~~g---v~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~  214 (294)
                       ++|+|||+++     .+             +.++    +.+.+   ..+||++||..++.+......|..+|...  +.
T Consensus        83 g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  162 (254)
T 1sby_A           83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFT  162 (254)
T ss_dssp             SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHHHHHH
Confidence             7899999832     11             1111    22222   46899999998877665555665544321  12


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCCCCCcc-e-----eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQG-F-----QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~-~-----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                      +.....+...|+++++|+||.+......... .     .+..-.......+++|+|+++++++.. ...|++|++.+|.
T Consensus       163 ~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~~~~~-~~~G~~~~v~gG~  240 (254)
T 1sby_A          163 NSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA-NKNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH-CCTTCEEEEETTE
T ss_pred             HHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHHHHHHHc-CCCCCEEEEeCCc
Confidence            2222233347999999999987632110000 0     000000112345899999999998873 5678999999874

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.74  E-value=1.2e-17  Score=148.84  Aligned_cols=193  Identities=11%  Similarity=0.114  Sum_probs=133.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--------CCCcEEeecCCCCHHHHHHHhc---CC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR---GV  164 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~l~---~~  164 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+..        ...+.++.+|++|.+.++++++   .+
T Consensus         7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i   86 (267)
T 3t4x_A            7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV   86 (267)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence            456899999999999999999999999999999999987643321        2357788999999998888776   67


Q ss_pred             cEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--
Q 022625          165 RSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--  212 (294)
Q Consensus       165 d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--  212 (294)
                      |++||+++.     +                         +...+++.+..+||++||..++.+......|..+|..-  
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  166 (267)
T 3t4x_A           87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLS  166 (267)
T ss_dssp             SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHHHH
Confidence            999998321     0                         11224455678999999998887766666665544311  


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCC--------CCccee-------e----ccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPG--------GKQGFQ-------F----EEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~--------~~~~~~-------~----~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                      +.+.....+...|++++.|+||.+.....        ......       +    ........+.+++|+|+++++++..
T Consensus       167 l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~  246 (267)
T 3t4x_A          167 LSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSP  246 (267)
T ss_dssp             HHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHSG
T ss_pred             HHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHHHcCc
Confidence            12222222334689999999998752100        000000       0    0111234578899999999998875


Q ss_pred             CC--CCCcEEEEecCCc
Q 022625          274 IP--QTGLIFEVCEISN  288 (294)
Q Consensus       274 ~~--~~g~~~~v~~g~~  288 (294)
                      ..  ..|+++++.+|-.
T Consensus       247 ~~~~itG~~i~vdGG~~  263 (267)
T 3t4x_A          247 LSSAINGSALRIDGGLV  263 (267)
T ss_dssp             GGTTCCSCEEEESTTCS
T ss_pred             cccCccCCeEEECCCcc
Confidence            43  5799999988853

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.74  E-value=1.7e-16  Score=141.82  Aligned_cols=192  Identities=16%  Similarity=0.129  Sum_probs=128.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc-chhh------hcCCCcEEeecCCCCHHHHHHHhc------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME------SFGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~-~~~~------~~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.++.. +..+      ..+..+.++.+|++|.++++++++      
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL  107 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999877653 2221      124578899999999998888776      


Q ss_pred             -CCcEEEEcCCc-----h---------------------HHhhhhhc--CCCEEEEecccccccC-CCCchhccchhHH-
Q 022625          163 -GVRSIICPSEG-----F---------------------ISNAGSLK--GVQHVILLSQLSVYRG-SGGIQALMKGNAR-  211 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~---------------------~~~~~~~~--gv~r~V~vSs~~~~~~-~~~~~~~~~~~~~-  211 (294)
                       .+|++||+++.     +                     +.+++...  +..+||++||..+... ..+...|..+|.. 
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~  187 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAAL  187 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHHHHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHHHHHHHH
Confidence             78999998321     0                     11122211  3469999998765433 3444556444431 


Q ss_pred             -HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc---eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          212 -KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       212 -~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~---~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                       .+.+.....+...|++++.|+||++.........   ..+........+.+++|+|+++++++....  ..|+++++.+
T Consensus       188 ~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG  267 (271)
T 3v2g_A          188 AGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDG  267 (271)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEeCc
Confidence             1222233334457999999999998732211110   011112233456789999999999886543  5799999988


Q ss_pred             CC
Q 022625          286 IS  287 (294)
Q Consensus       286 g~  287 (294)
                      |-
T Consensus       268 G~  269 (271)
T 3v2g_A          268 GA  269 (271)
T ss_dssp             TT
T ss_pred             Cc
Confidence            74

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.74  E-value=4.5e-17  Score=147.70  Aligned_cols=180  Identities=16%  Similarity=0.109  Sum_probs=123.9

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      ....+|+|+||||+|+||++++++|+++|++|++++|+.+++.+.      .+..+.++.+|++|.++++++++      
T Consensus        27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             CCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            346789999999999999999999999999999999998765432      13468899999999998888775      


Q ss_pred             -CCcEEEEcCCc-----h---------------------H----HhhhhhcC-CCEEEEecccccccCCCCchhccchhH
Q 022625          163 -GVRSIICPSEG-----F---------------------I----SNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~---------------------~----~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                       .+|++||+++.     +                     +    ...+.+.+ ..+||++||..+..+..+...|..+|.
T Consensus       107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  186 (301)
T 3tjr_A          107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKY  186 (301)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHH
Confidence             67999998321     0                     1    11233444 579999999988877666666755543


Q ss_pred             HH--HHHHHHHHHHhCCCCEEEEEccceecCCCC--------Cc------ceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          211 RK--LAEQDESMLMASGIPYTIIRTGVLQNTPGG--------KQ------GFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       211 ~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~--------~~------~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      .-  +.+.....+...|+++++|+||++......        ..      ...+........+++++|+|++++.++..+
T Consensus       187 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          187 GVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence            21  222333334557999999999987632110        00      001111122345789999999999999875

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.74  E-value=9.8e-17  Score=142.28  Aligned_cols=196  Identities=13%  Similarity=0.133  Sum_probs=124.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-Cccchhhh------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R-~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|+++.+ +.+...+.      .+..+.++.+|++|.++++++++      
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF   84 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            456899999999999999999999999999999855 44332211      23468899999999998888775      


Q ss_pred             -CCcEEEEcCCch---------------------------HHhhhhhc--CCCEEEEecccccc-cCCCCchhccchhHH
Q 022625          163 -GVRSIICPSEGF---------------------------ISNAGSLK--GVQHVILLSQLSVY-RGSGGIQALMKGNAR  211 (294)
Q Consensus       163 -~~d~Vi~~~~~~---------------------------~~~~~~~~--gv~r~V~vSs~~~~-~~~~~~~~~~~~~~~  211 (294)
                       .+|++||+++..                           +.+++...  .-.+||++||..+. .+......|..+|..
T Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa  164 (259)
T 3edm_A           85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGA  164 (259)
T ss_dssp             CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHHHHHHH
Confidence             679999983210                           11122211  12489999998876 444455556444431


Q ss_pred             H--HHHHHHHHHHhCCCCEEEEEccceecCCCCCc-----ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEE
Q 022625          212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-----GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE  282 (294)
Q Consensus       212 ~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-----~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~  282 (294)
                      -  +.+.....+. .+++++.|+||.+........     ...+........+.+++|+|+++++++....  ..|++|+
T Consensus       165 ~~~l~~~la~e~~-~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~  243 (259)
T 3edm_A          165 VMTFTRGLAKEVG-PKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGACYD  243 (259)
T ss_dssp             HHHHHHHHHHHHT-TTCEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHHC-CCCEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEE
Confidence            1  1121112222 349999999998763221110     0111112223446689999999999887653  4799999


Q ss_pred             EecCCccccc
Q 022625          283 VCEISNLCEQ  292 (294)
Q Consensus       283 v~~g~~~~~e  292 (294)
                      +.+|....++
T Consensus       244 vdGg~~~~~~  253 (259)
T 3edm_A          244 INGGVLFSEG  253 (259)
T ss_dssp             ESBCSSBC--
T ss_pred             ECCCcCCCCC
Confidence            9998766554

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.74  E-value=5.6e-17  Score=141.00  Aligned_cols=172  Identities=12%  Similarity=0.083  Sum_probs=116.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhcCC----cEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGV----RSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~~~----d~Vi~~~  171 (294)
                      ||+++||||+|+||++++++|+++|++|++++|+++++.+.   .+..+.++.+|++|.++++++++.+    |++||++
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A   80 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA   80 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence            47899999999999999999999999999999998765443   2457889999999999999998765    8999983


Q ss_pred             C-----ch---------------------HH----hhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HHHHHHH
Q 022625          172 E-----GF---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQDES  219 (294)
Q Consensus       172 ~-----~~---------------------~~----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~ae~  219 (294)
                      +     .+                     +.    ..+.+.+. +||++||..+..+......|..+|..-  +.+....
T Consensus        81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~  159 (230)
T 3guy_A           81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRL  159 (230)
T ss_dssp             CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeecccCCCCCCCchhHHHHHHHHHHHHHHHH
Confidence            2     00                     11    11233333 999999998887666666665544311  1222222


Q ss_pred             HHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          220 MLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       220 ~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      .+...|++++.|+||.+........    ........+.+++|+|+++++++..+.
T Consensus       160 e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~dvA~~i~~l~~~~~  211 (230)
T 3guy_A          160 ELKGKPMKIIAVYPGGMATEFWETS----GKSLDTSSFMSAEDAALMIHGALANIG  211 (230)
T ss_dssp             HTTTSSCEEEEEEECCC--------------------CCCHHHHHHHHHHHCCEET
T ss_pred             HHHhcCeEEEEEECCcccChHHHhc----CCCCCcccCCCHHHHHHHHHHHHhCcC
Confidence            2334689999999999873321111    111223467899999999999887543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.73  E-value=3.7e-17  Score=145.87  Aligned_cols=174  Identities=12%  Similarity=0.131  Sum_probs=120.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+.+|+|+||||+|+||++++++|+++|++|++++|++++..+.      .+..+.++.+|++|.+++.++++       
T Consensus        28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  107 (272)
T 1yb1_A           28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG  107 (272)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            35679999999999999999999999999999999998654432      13468899999999998887765       


Q ss_pred             CCcEEEEcCC----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH
Q 022625          163 GVRSIICPSE----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK  212 (294)
Q Consensus       163 ~~d~Vi~~~~----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~  212 (294)
                      ++|+|||+++    + +                         +...+.+.+.++||++||..++.+......|..+|...
T Consensus       108 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  187 (272)
T 1yb1_A          108 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAA  187 (272)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHH
T ss_pred             CCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHHHH
Confidence            6799999832    0 0                         11223456788999999988766544444454443211


Q ss_pred             --HHHHHHHHHH---hCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          213 --LAEQDESMLM---ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       213 --~~~~ae~~l~---~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                        +.+.....+.   ..|+++++||||++........ .     .....+++++|+|+++++++..+.
T Consensus       188 ~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~-~-----~~~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          188 VGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-S-----TSLGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             HHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-H-----HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc-c-----ccccCCCCHHHHHHHHHHHHHcCC
Confidence              1121112222   3589999999998763321110 0     112356899999999999998753

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.73  E-value=4.7e-17  Score=145.30  Aligned_cols=190  Identities=13%  Similarity=0.039  Sum_probs=129.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHHhc-------CCcEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRSI  167 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~-------~~d~V  167 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|++++..+...  ..+.++.+|++|.++++++++       ++|++
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   86 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   86 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            567999999999999999999999999999999999876543221  247889999999998887775       67999


Q ss_pred             EEcCC-----c-h---------------------HHhh----hhhcCCCEEEEecccccccCCCCchhccchhHH--HHH
Q 022625          168 ICPSE-----G-F---------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA  214 (294)
Q Consensus       168 i~~~~-----~-~---------------------~~~~----~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~  214 (294)
                      ||+++     + +                     +.++    +++. ..+||++||..+..+......|..+|..  .+.
T Consensus        87 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~  165 (270)
T 1yde_A           87 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTAMT  165 (270)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHHHHHHHHH
Confidence            99821     1 0                     1111    2222 4799999998766554444556444431  122


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCCC-----C-Ccc-eee---ccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcEEEE
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTPG-----G-KQG-FQF---EEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEV  283 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~~-----~-~~~-~~~---~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~~~v  283 (294)
                      +.....+...|+++++|+||++.....     . ... ..+   ........+.+++|+|+++++++.+.. ..|+.+.+
T Consensus       166 ~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~itG~~i~v  245 (270)
T 1yde_A          166 KALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASEANFCTGIELLV  245 (270)
T ss_dssp             HHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred             HHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcccCCCcCCCEEEE
Confidence            223333445799999999998763110     0 000 000   011122345789999999999887633 47899999


Q ss_pred             ecCC
Q 022625          284 CEIS  287 (294)
Q Consensus       284 ~~g~  287 (294)
                      .+|.
T Consensus       246 dGG~  249 (270)
T 1yde_A          246 TGGA  249 (270)
T ss_dssp             STTT
T ss_pred             CCCe
Confidence            8874

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.73  E-value=7.4e-17  Score=143.79  Aligned_cols=190  Identities=16%  Similarity=0.154  Sum_probs=124.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~-~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      ..+|+|+||||+|+||++++++|+++|++|+++ .|+.+.....      .+..+.++.+|++|.++++++++       
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            357899999999999999999999999999887 5555443321      23468899999999988887765       


Q ss_pred             CCcEEEEcCC-----c-h---------------------HHhh----hhh---cCCCEEEEecccccccCCC-Cchhccc
Q 022625          163 GVRSIICPSE-----G-F---------------------ISNA----GSL---KGVQHVILLSQLSVYRGSG-GIQALMK  207 (294)
Q Consensus       163 ~~d~Vi~~~~-----~-~---------------------~~~~----~~~---~gv~r~V~vSs~~~~~~~~-~~~~~~~  207 (294)
                      .+|+|||+++     . +                     +..+    +.+   .+..+||++||..+..+.. ....|..
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  183 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAA  183 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHH
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHH
Confidence            6799999822     1 0                     1111    222   1457899999987765433 3344544


Q ss_pred             hhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCC-----cceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          208 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-----QGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       208 ~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-----~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      +|..  .+.+.....+...|+++++|+||.+.......     ....+........+.+++|+|+++++++....  ..|
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~tG  263 (272)
T 4e3z_A          184 SKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVTG  263 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCccccccC
Confidence            4331  12222223344569999999999987322111     00111122333446689999999999987543  468


Q ss_pred             cEEEEecC
Q 022625          279 LIFEVCEI  286 (294)
Q Consensus       279 ~~~~v~~g  286 (294)
                      ++|++.+|
T Consensus       264 ~~i~vdgG  271 (272)
T 4e3z_A          264 SILNVSGG  271 (272)
T ss_dssp             CEEEESTT
T ss_pred             CEEeecCC
Confidence            99999877

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.73  E-value=1.7e-16  Score=143.68  Aligned_cols=193  Identities=11%  Similarity=0.065  Sum_probs=132.4

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc------------cchhh------hcCCCcEEeecCCCCHHH
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK------------RNAME------SFGTYVESMAGDASNKKF  156 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~------------~~~~~------~~~~~v~~v~~D~~d~~~  156 (294)
                      ..+.+|+++||||+++||++++++|+++|++|+++.|+.            +++.+      ..+..+.++.+|++|.++
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  103 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA  103 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            346789999999999999999999999999999999873            22221      123578899999999998


Q ss_pred             HHHHhc-------CCcEEEEcCC-----c-h---------------------HHh----hhhhc-CCCEEEEeccccccc
Q 022625          157 LKTALR-------GVRSIICPSE-----G-F---------------------ISN----AGSLK-GVQHVILLSQLSVYR  197 (294)
Q Consensus       157 l~~~l~-------~~d~Vi~~~~-----~-~---------------------~~~----~~~~~-gv~r~V~vSs~~~~~  197 (294)
                      ++++++       .+|++||+++     . +                     +..    .+.+. +..+||++||..+..
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~  183 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR  183 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence            887775       6799999822     1 1                     111    12222 367999999998887


Q ss_pred             CCCCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc-----------eee--------ccCCCCCC
Q 022625          198 GSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG-----------FQF--------EEGCAANG  256 (294)
Q Consensus       198 ~~~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~-----------~~~--------~~g~~~~~  256 (294)
                      +......|..+|..  .+.+.....+...|++++.|+||.+.........           ...        ........
T Consensus       184 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r  263 (299)
T 3t7c_A          184 GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIP  263 (299)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSSCS
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccCcC
Confidence            66666666555432  1223333334557999999999998632211100           000        00111145


Q ss_pred             CcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          257 SLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       257 ~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      +.+++|+|+++++++....  ..|+++++.+|.
T Consensus       264 ~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  296 (299)
T 3t7c_A          264 YVEPADISNAILFLVSDDARYITGVSLPVDGGA  296 (299)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCHHHHHHHHHHHhCcccccCcCCEEeeCCCc
Confidence            6799999999999997654  569999998874

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.73  E-value=9.4e-17  Score=142.76  Aligned_cols=193  Identities=16%  Similarity=0.119  Sum_probs=130.8

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEE-cCccchhhh------cCCCcEEeecCCCCHHHHHHHhc----
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMES------FGTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~-R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      ...+.+|+|+||||+|+||++++++|+++|++|+++. |+.++..+.      ....++++.+|++|.++++++++    
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3456789999999999999999999999999997765 454433221      23578999999999998888775    


Q ss_pred             ---CCcEEEEcCCc-----h---------------------HHhhh-----hhcCCCEEEEecccccccCCCCchhccch
Q 022625          163 ---GVRSIICPSEG-----F---------------------ISNAG-----SLKGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       163 ---~~d~Vi~~~~~-----~---------------------~~~~~-----~~~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                         .+|++||+++.     +                     +.+.+     ++.+..+||++||..+..+..+...|..+
T Consensus       101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  180 (267)
T 4iiu_A          101 QHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAA  180 (267)
T ss_dssp             HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             HhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHH
Confidence               67999998321     0                     11111     24567899999998887666666666554


Q ss_pred             hHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce---eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF---QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       209 ~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~---~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                      |..  .+.+.....+...|+++++|+||.+..........   .+........+.+++|+|+++++++....  ..|+++
T Consensus       181 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~~~itG~~i  260 (267)
T 4iiu_A          181 KAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVI  260 (267)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCccCCEE
Confidence            431  12223333345579999999999987332211100   01122233456799999999999987643  579999


Q ss_pred             EEecC
Q 022625          282 EVCEI  286 (294)
Q Consensus       282 ~v~~g  286 (294)
                      ++.+|
T Consensus       261 ~vdGG  265 (267)
T 4iiu_A          261 SINGG  265 (267)
T ss_dssp             EESTT
T ss_pred             EeCCC
Confidence            99877

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.73  E-value=3.1e-17  Score=146.97  Aligned_cols=191  Identities=11%  Similarity=0.076  Sum_probs=133.0

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc------C
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------G  163 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~------~  163 (294)
                      .+.+|+++||||+|+||++++++|+++|++|++++|++++..+.      .+..+.++.+|++|.++++++++      .
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~  109 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP  109 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            46789999999999999999999999999999999988764432      23578899999999988877765      6


Q ss_pred             CcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          164 VRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       164 ~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      +|++||+++.     +                         +...+++.+..+||++||..+..+......|..+|..  
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~  189 (275)
T 4imr_A          110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQH  189 (275)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHH
Confidence            7999998321     0                         1112345677899999999887765555556544431  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCC-----cc-e-eeccCC-CCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-----QG-F-QFEEGC-AANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-----~~-~-~~~~g~-~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                      .+.+.....+...|++++.|+||.+.......     .. . .+.... ....+.+++|+|+++++++....  ..|+++
T Consensus       190 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i  269 (275)
T 4imr_A          190 NLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMTGETI  269 (275)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCCCCCCEE
Confidence            12222333344579999999999876221000     00 0 000001 22345689999999999887643  479999


Q ss_pred             EEecC
Q 022625          282 EVCEI  286 (294)
Q Consensus       282 ~v~~g  286 (294)
                      .+.+|
T Consensus       270 ~vdGG  274 (275)
T 4imr_A          270 FLTGG  274 (275)
T ss_dssp             EESSC
T ss_pred             EeCCC
Confidence            99876

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.73  E-value=3.9e-17  Score=146.94  Aligned_cols=189  Identities=13%  Similarity=0.084  Sum_probs=127.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh-------------hcCCCcEEeecCCCCHHHHHHHhc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------------SFGTYVESMAGDASNKKFLKTALR  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~-------------~~~~~v~~v~~D~~d~~~l~~~l~  162 (294)
                      .+.+|+++||||+++||++++++|+++|++|+++.|+.++..+             ..+..+.++.+|++|.++++++++
T Consensus         6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   85 (285)
T 3sc4_A            6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVA   85 (285)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            4568999999999999999999999999999999998764211             123468899999999998887775


Q ss_pred             -------CCcEEEEcCCc-----h---------------------H----HhhhhhcCCCEEEEecccccccCC-CCchh
Q 022625          163 -------GVRSIICPSEG-----F---------------------I----SNAGSLKGVQHVILLSQLSVYRGS-GGIQA  204 (294)
Q Consensus       163 -------~~d~Vi~~~~~-----~---------------------~----~~~~~~~gv~r~V~vSs~~~~~~~-~~~~~  204 (294)
                             .+|++||+++.     +                     +    ...+++.+..+||++||..+..+. .....
T Consensus        86 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~  165 (285)
T 3sc4_A           86 KTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTP  165 (285)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCch
Confidence                   78999998321     0                     1    112344567899999998776543 33445


Q ss_pred             ccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcEE
Q 022625          205 LMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIF  281 (294)
Q Consensus       205 ~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~~  281 (294)
                      |..+|..  .+.+.....+...|++++.|+||.+.+.+....  .+........+.+++|+|+++++++..+. ..|+.+
T Consensus       166 Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~--~~~~~~~~~r~~~pedvA~~~~~l~s~~~~~tG~~i  243 (285)
T 3sc4_A          166 YMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQN--LLGGDEAMARSRKPEVYADAAYVVLNKPSSYTGNTL  243 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHH--HHTSCCCCTTCBCTHHHHHHHHHHHTSCTTCCSCEE
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHh--hccccccccCCCCHHHHHHHHHHHhCCcccccceEE
Confidence            5444331  122222233445799999999995432221000  01111123456789999999999998765 567777


Q ss_pred             EEecC
Q 022625          282 EVCEI  286 (294)
Q Consensus       282 ~v~~g  286 (294)
                      .+.++
T Consensus       244 ~~dgg  248 (285)
T 3sc4_A          244 LCEDV  248 (285)
T ss_dssp             EHHHH
T ss_pred             EEcCc
Confidence            66554

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.73  E-value=7.1e-17  Score=145.20  Aligned_cols=192  Identities=14%  Similarity=0.072  Sum_probs=129.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc-cchhh-------hcCCCcEEeecCCCC----HHHHHHHhc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME-------SFGTYVESMAGDASN----KKFLKTALR  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~-~~~~~-------~~~~~v~~v~~D~~d----~~~l~~~l~  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+. +++.+       ..+..+.++.+|++|    .++++++++
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~   98 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN   98 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence            456789999999999999999999999999999999998 54322       123468899999999    888877665


Q ss_pred             -------CCcEEEEcCC-------------c-----h------------------HHh----hhhhcC------CCEEEE
Q 022625          163 -------GVRSIICPSE-------------G-----F------------------ISN----AGSLKG------VQHVIL  189 (294)
Q Consensus       163 -------~~d~Vi~~~~-------------~-----~------------------~~~----~~~~~g------v~r~V~  189 (294)
                             ++|++||+++             .     .                  +..    .+++.+      ..+||+
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~  178 (288)
T 2x9g_A           99 SCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVN  178 (288)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEE
Confidence                   6899999822             1     1                  001    122233      569999


Q ss_pred             ecccccccCCCCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc---eeeccCCCCCCC-cCHHHH
Q 022625          190 LSQLSVYRGSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG---FQFEEGCAANGS-LSKEDA  263 (294)
Q Consensus       190 vSs~~~~~~~~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~---~~~~~g~~~~~~-Is~eDv  263 (294)
                      +||..++.+......|..+|..  .+.+.....+...|+++++|+||.+.... ....   ..+........+ .+++|+
T Consensus       179 isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~~~~~~~~~~~~p~~r~~~~pedv  257 (288)
T 2x9g_A          179 LCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMGEEEKDKWRRKVPLGRREASAEQI  257 (288)
T ss_dssp             ECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSCHHHHHHHHHTCTTTSSCCCHHHH
T ss_pred             EecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccChHHHHHHHhhCCCCCCCCCHHHH
Confidence            9999887766555566555431  12233333345579999999999887332 1100   001111122334 699999


Q ss_pred             HHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          264 AFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       264 A~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      |+++++++....  ..|+.+.+.+|-
T Consensus       258 A~~v~~l~s~~~~~itG~~i~vdGG~  283 (288)
T 2x9g_A          258 ADAVIFLVSGSAQYITGSIIKVDGGL  283 (288)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCccccCccCCEEEECcch
Confidence            999999997543  578999998774

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.73  E-value=3.8e-17  Score=143.43  Aligned_cols=186  Identities=13%  Similarity=0.078  Sum_probs=128.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-----CCcEEEEcC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-----GVRSIICPS  171 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-----~~d~Vi~~~  171 (294)
                      .+|+++||||+|+||++++++|++ .|+.|++..|+++..    ...+.++.+|++|.++++++++     .+|++||++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nA   78 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS----AENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNA   78 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC----CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc----cccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECC
Confidence            578999999999999999999999 789999998887522    2357899999999999988876     679999983


Q ss_pred             Cc-----h---------------------HHhhhhhc--CCCEEEEecccccccCCCCchhccchhHH--HHHHHHHHHH
Q 022625          172 EG-----F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESML  221 (294)
Q Consensus       172 ~~-----~---------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~ae~~l  221 (294)
                      +.     +                     +.+++...  .-.+||++||..++.+......|..+|..  .+.+.....+
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~  158 (244)
T 4e4y_A           79 GILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDL  158 (244)
T ss_dssp             CCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence            21     0                     11122111  11589999999887776666666555432  1222233334


Q ss_pred             HhCCCCEEEEEccceecCCCCC---------------cceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          222 MASGIPYTIIRTGVLQNTPGGK---------------QGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       222 ~~~gl~~tivRPg~l~~~~~~~---------------~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                      ...|+++++|+||.+.......               ....+........+.+++|+|+++++++..+.  ..|+.+++.
T Consensus       159 ~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vd  238 (244)
T 4e4y_A          159 AKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPID  238 (244)
T ss_dssp             GGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             HHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccccccCCeEeEC
Confidence            4579999999999876221000               00011122333457799999999999997644  468999998


Q ss_pred             cCC
Q 022625          285 EIS  287 (294)
Q Consensus       285 ~g~  287 (294)
                      +|-
T Consensus       239 GG~  241 (244)
T 4e4y_A          239 GGY  241 (244)
T ss_dssp             TTG
T ss_pred             CCc
Confidence            774

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.73  E-value=7.1e-17  Score=147.51  Aligned_cols=194  Identities=12%  Similarity=0.050  Sum_probs=132.2

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc------------cchhh------hcCCCcEEeecCCCCHHH
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK------------RNAME------SFGTYVESMAGDASNKKF  156 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~------------~~~~~------~~~~~v~~v~~D~~d~~~  156 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|++++|+.            +++.+      ..+..+.++.+|++|.++
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  121 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS  121 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            356789999999999999999999999999999998862            22211      123468899999999998


Q ss_pred             HHHHhc-------CCcEEEEcCCc-------------h-------------H----HhhhhhcC-CCEEEEecccccccC
Q 022625          157 LKTALR-------GVRSIICPSEG-------------F-------------I----SNAGSLKG-VQHVILLSQLSVYRG  198 (294)
Q Consensus       157 l~~~l~-------~~d~Vi~~~~~-------------~-------------~----~~~~~~~g-v~r~V~vSs~~~~~~  198 (294)
                      ++++++       .+|++||+++.             +             +    ...+.+.+ -.+||++||..++.+
T Consensus       122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~  201 (317)
T 3oec_A          122 LQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG  201 (317)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC
Confidence            888775       67999998320             0             1    11223333 478999999988776


Q ss_pred             CCCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCC------------Ccce------ee-ccCCCCCCC
Q 022625          199 SGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGG------------KQGF------QF-EEGCAANGS  257 (294)
Q Consensus       199 ~~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~------------~~~~------~~-~~g~~~~~~  257 (294)
                      ......|..+|..  .+.+.....+...|+++++|+||++......            ....      .+ ........+
T Consensus       202 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  281 (317)
T 3oec_A          202 APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPW  281 (317)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSSSSS
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCCCCC
Confidence            6666666555432  1223333334557999999999987631100            0000      00 011122567


Q ss_pred             cCHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          258 LSKEDAAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       258 Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      .+++|+|+++++++....  ..|++++|.+|..
T Consensus       282 ~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          282 VEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             CCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence            899999999999886543  4799999988753

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.73  E-value=2.4e-16  Score=140.24  Aligned_cols=193  Identities=12%  Similarity=0.064  Sum_probs=135.5

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh-----hcCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----SFGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~-----~~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      ..+.+|+++||||+++||+++++.|+++|++|+++.|+.+....     ....++.++.+|++|+++++++++       
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999999998765321     124578899999999988776654       


Q ss_pred             CCcEEEEcCCc------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--H
Q 022625          163 GVRSIICPSEG------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R  211 (294)
Q Consensus       163 ~~d~Vi~~~~~------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~  211 (294)
                      .+|++||+++-            +                 ....+++.+ .+||++||..+..+......|..+|.  .
T Consensus        83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav~  161 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGNTSGYCASKGAQL  161 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCSSCHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCCCchHHHHHHHHHH
Confidence            56999998321            0                 112234444 79999999988776666666755553  2


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce----------eeccCCCC-CCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF----------QFEEGCAA-NGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~----------~~~~g~~~-~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      .+.+.....+...||+++.|.||++..........          .+...... .-+-.++|+|.++++++....  ..|
T Consensus       162 ~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~~iTG  241 (258)
T 4gkb_A          162 ALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASHTTG  241 (258)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccC
Confidence            24444555566789999999999876321110000          00011111 235689999999999887644  479


Q ss_pred             cEEEEecCCc
Q 022625          279 LIFEVCEISN  288 (294)
Q Consensus       279 ~~~~v~~g~~  288 (294)
                      +.+.|.+|-+
T Consensus       242 ~~i~VDGG~T  251 (258)
T 4gkb_A          242 EWLFVDGGYT  251 (258)
T ss_dssp             CEEEESTTTT
T ss_pred             CeEEECCCcc
Confidence            9999988854

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.73  E-value=1.4e-16  Score=140.96  Aligned_cols=184  Identities=12%  Similarity=0.123  Sum_probs=123.6

Q ss_pred             CCCcCCCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEEcCccchhhh-----cCCCcEEeecCCCCHHHHHHHhc--
Q 022625           93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR--  162 (294)
Q Consensus        93 ~~~~~~~~~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~R~~~~~~~~-----~~~~v~~v~~D~~d~~~l~~~l~--  162 (294)
                      ......+|+|+||||+|+||++++++|+++|   ++|+++.|+.++....     ....++++.+|++|.++++++++  
T Consensus        15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   94 (267)
T 1sny_A           15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADI   94 (267)
T ss_dssp             -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHH
Confidence            3445678999999999999999999999999   9999999987653321     13468999999999988888776  


Q ss_pred             -------CCcEEEEcCC-----c-h---------------------HHh----hhhhc------C-----CCEEEEeccc
Q 022625          163 -------GVRSIICPSE-----G-F---------------------ISN----AGSLK------G-----VQHVILLSQL  193 (294)
Q Consensus       163 -------~~d~Vi~~~~-----~-~---------------------~~~----~~~~~------g-----v~r~V~vSs~  193 (294)
                             .+|+|||+++     + +                     +.+    .+.+.      +     ..+||++||.
T Consensus        95 ~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~  174 (267)
T 1sny_A           95 EGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSI  174 (267)
T ss_dssp             HHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCG
T ss_pred             HHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecc
Confidence                   7999999832     0 0                     111    12222      2     5799999998


Q ss_pred             ccccCCC---CchhccchhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHH
Q 022625          194 SVYRGSG---GIQALMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICV  268 (294)
Q Consensus       194 ~~~~~~~---~~~~~~~~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv  268 (294)
                      .++.+..   +...|..+|...  +.+.....+...++++++||||++......           ....++++|+|+.++
T Consensus       175 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----------~~~~~~~~~~a~~~~  243 (267)
T 1sny_A          175 LGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG-----------SSAPLDVPTSTGQIV  243 (267)
T ss_dssp             GGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC-----------TTCSBCHHHHHHHHH
T ss_pred             cccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCC-----------CCCCCCHHHHHHHHH
Confidence            8765432   334454433211  112222233447999999999998632211           124689999999999


Q ss_pred             HHhhCCC--CCCcEEEEecCC
Q 022625          269 EALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       269 ~aL~~~~--~~g~~~~v~~g~  287 (294)
                      .++....  ..|..|.+.++.
T Consensus       244 ~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          244 QTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             HHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHhcCcCCCCcEEccCCcC
Confidence            9998643  456666654443

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.73  E-value=1.5e-16  Score=142.39  Aligned_cols=193  Identities=14%  Similarity=0.059  Sum_probs=126.1

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc------------cchhh------hcCCCcEEeecCCCCHHH
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK------------RNAME------SFGTYVESMAGDASNKKF  156 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~------------~~~~~------~~~~~v~~v~~D~~d~~~  156 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|++++|+.            +.+.+      ..+..+.++.+|++|.++
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   85 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA   85 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence            346789999999999999999999999999999999872            22111      123478899999999998


Q ss_pred             HHHHhc-------CCcEEEEcCCc-----------h-------------HHhhhhh--cCCCEEEEecccccccCC----
Q 022625          157 LKTALR-------GVRSIICPSEG-----------F-------------ISNAGSL--KGVQHVILLSQLSVYRGS----  199 (294)
Q Consensus       157 l~~~l~-------~~d~Vi~~~~~-----------~-------------~~~~~~~--~gv~r~V~vSs~~~~~~~----  199 (294)
                      ++++++       .+|++||+++.           +             +.+++..  .+-.+||++||..+..+.    
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  165 (287)
T 3pxx_A           86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPP  165 (287)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccc
Confidence            887775       78999998321           0             1122222  234689999998764321    


Q ss_pred             -------CCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc------------ce-------eeccC
Q 022625          200 -------GGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ------------GF-------QFEEG  251 (294)
Q Consensus       200 -------~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~------------~~-------~~~~g  251 (294)
                             .....|..+|..  .+.+.....+...|++++.|+||.+........            ..       .....
T Consensus       166 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (287)
T 3pxx_A          166 GAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQ  245 (287)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGC
T ss_pred             cccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhc
Confidence                   112233333221  111222222344699999999999863322110            00       00112


Q ss_pred             CCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          252 CAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       252 ~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      .....+.+++|+|+++++++....  ..|+++++.+|.
T Consensus       246 ~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~  283 (287)
T 3pxx_A          246 AMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGA  283 (287)
T ss_dssp             SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchh
Confidence            222567899999999999986543  579999998874

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.72  E-value=3.9e-17  Score=142.54  Aligned_cols=184  Identities=9%  Similarity=0.059  Sum_probs=123.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc---------CCcEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---------GVRSII  168 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~---------~~d~Vi  168 (294)
                      .+|+++||||+|+||++++++|+++|++|+++.|++++..    ....++.+|++|.+++.++++         ++|+||
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv   77 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF   77 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence            4689999999999999999999999999999999987643    235678899999988877665         689999


Q ss_pred             EcCC---------ch------------------HHhhhhhc--CCCEEEEecccccccCCCCchhccchhHHH--HHHHH
Q 022625          169 CPSE---------GF------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD  217 (294)
Q Consensus       169 ~~~~---------~~------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~a  217 (294)
                      |+++         ..                  +.+++...  ...+||++||..++.+......|..+|..-  +.+..
T Consensus        78 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  157 (236)
T 1ooe_A           78 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSL  157 (236)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             ECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHH
Confidence            9832         10                  11112111  125999999998877655555664443311  11111


Q ss_pred             HHHHH--hCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC---CCCCcEEEEecCCcc
Q 022625          218 ESMLM--ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI---PQTGLIFEVCEISNL  289 (294)
Q Consensus       218 e~~l~--~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~---~~~g~~~~v~~g~~~  289 (294)
                      ...+.  ..|+++++|+||.+.. +....   ..........++++|+|++++..|..+   ...|+.+.+.++...
T Consensus       158 a~e~~~~~~gi~v~~v~Pg~v~t-~~~~~---~~~~~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~~~  230 (236)
T 1ooe_A          158 AAKDSGLPDNSAVLTIMPVTLDT-PMNRK---WMPNADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTENGT  230 (236)
T ss_dssp             HSTTSSCCTTCEEEEEEESCBCC-HHHHH---HSTTCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             HHHhcccCCCeEEEEEecCcccC-cchhh---cCCCccccccCCHHHHHHHHHHHHcCCCcccccccEEEEecCCCc
Confidence            11122  4569999999998762 21000   001111234678999999999777433   246899999887643

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.72  E-value=9.7e-17  Score=141.60  Aligned_cols=183  Identities=14%  Similarity=0.123  Sum_probs=125.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-------CCcEEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII  168 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi  168 (294)
                      ...+|+|+||||+|+||++++++|+++|++|++++|++++..      -..+.+|++|.++++++++       .+|++|
T Consensus        19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li   92 (251)
T 3orf_A           19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFV   92 (251)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            334789999999999999999999999999999999987643      2456789999988887765       359999


Q ss_pred             EcCCc------h---------------------HHhhhhhc--CCCEEEEecccccccCCCCchhccchhHHHHHHHHHH
Q 022625          169 CPSEG------F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES  219 (294)
Q Consensus       169 ~~~~~------~---------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~  219 (294)
                      |+++.      +                     +.+++...  .-.+||++||..++.+......|..+|... ...++.
T Consensus        93 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~-~~~~~~  171 (251)
T 3orf_A           93 CAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAAT-HHIIKD  171 (251)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHH-HHHHHH
T ss_pred             ECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHH-HHHHHH
Confidence            98321      1                     11122111  125899999998877666666664443311 111122


Q ss_pred             HHH-----hCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhC---CCCCCcEEEEecCCcc
Q 022625          220 MLM-----ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES---IPQTGLIFEVCEISNL  289 (294)
Q Consensus       220 ~l~-----~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~---~~~~g~~~~v~~g~~~  289 (294)
                      +..     ..++++++|+||.+.....    ..+........+++++|+|+++++++..   ....|+.+++.+++..
T Consensus       172 la~e~~~~~~gi~v~~v~PG~v~t~~~----~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          172 LASENGGLPAGSTSLGILPVTLDTPTN----RKYMSDANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             HTSTTSSSCTTCEEEEEEESCBCCHHH----HHHCTTSCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             HHHHhcccCCCcEEEEEecCcCcCcch----hhhcccccccccCCHHHHHHHHHHHhcCccccCCcceEEEEecCCcc
Confidence            212     3689999999998762110    0111222335678999999999999988   4467999999887653

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.72  E-value=1.7e-16  Score=141.50  Aligned_cols=179  Identities=11%  Similarity=0.078  Sum_probs=118.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.      .+..+.++.+|++|.++++++++       .
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999999999999999999999999999998764432      13467889999999988887765       6


Q ss_pred             CcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHH
Q 022625          164 VRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL  213 (294)
Q Consensus       164 ~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~  213 (294)
                      +|++||+++.     +                         +...+++.+..+||++||..+..+......|..+|..- 
T Consensus        82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal-  160 (264)
T 3tfo_A           82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAV-  160 (264)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHH-
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHH-
Confidence            7999998321     0                         11224456778999999998877666666665544311 


Q ss_pred             HHHHHHHHHh-CCCCEEEEEccceecCCCCCcc---eeeccCCCCCCCcCHHHHHHHHHHHhhCCCC
Q 022625          214 AEQDESMLMA-SGIPYTIIRTGVLQNTPGGKQG---FQFEEGCAANGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       214 ~~~ae~~l~~-~gl~~tivRPg~l~~~~~~~~~---~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      ....+.+..+ .|++++.|+||++.........   .............+++|+|+++++++..+..
T Consensus       161 ~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~  227 (264)
T 3tfo_A          161 RAISDGLRQESTNIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVRQVIEAPQS  227 (264)
T ss_dssp             HHHHHHHHHHCSSEEEEEEEECCC-----------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHhCCCCEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCCcc
Confidence            0011111111 4899999999987632211000   0000001112247899999999999988764

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.72  E-value=1.6e-16  Score=145.28  Aligned_cols=179  Identities=12%  Similarity=0.128  Sum_probs=120.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CC--CcEEeecCCCCHHHHHHHhc-----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GT--YVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~--~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      .+.+|+|+||||+|+||++++++|+++|++|++++|+.+++.+..      ..  .+.++.+|++|.+++.++++     
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            346799999999999999999999999999999999987644321      12  68899999999998888775     


Q ss_pred             --CCcEEEEcCC-----ch-------------------------HHhhhhhc------CCCEEEEecccccccCCCCchh
Q 022625          163 --GVRSIICPSE-----GF-------------------------ISNAGSLK------GVQHVILLSQLSVYRGSGGIQA  204 (294)
Q Consensus       163 --~~d~Vi~~~~-----~~-------------------------~~~~~~~~------gv~r~V~vSs~~~~~~~~~~~~  204 (294)
                        .+|+|||+++     .+                         +...+.+.      +..+||++||..+..+......
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~  164 (319)
T 3ioy_A           85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGI  164 (319)
T ss_dssp             TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHH
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHH
Confidence              5699999832     10                         11112222      4578999999988877666666


Q ss_pred             ccchhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcce---ee-------c------cCCCCCCCcCHHHHHHH
Q 022625          205 LMKGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF---QF-------E------EGCAANGSLSKEDAAFI  266 (294)
Q Consensus       205 ~~~~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~---~~-------~------~g~~~~~~Is~eDvA~~  266 (294)
                      |..+|..-  +.+.....+...|+++++|+||++..........   .+       .      ........++++|+|+.
T Consensus       165 Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~  244 (319)
T 3ioy_A          165 YNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGAR  244 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHH
Confidence            65554311  2222333345579999999999876322110000   00       0      00001122799999999


Q ss_pred             HHHHhhCC
Q 022625          267 CVEALESI  274 (294)
Q Consensus       267 iv~aL~~~  274 (294)
                      ++.+++.+
T Consensus       245 ~~~al~~~  252 (319)
T 3ioy_A          245 VIEAMKAN  252 (319)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHHcC
Confidence            99999875

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.72  E-value=8.2e-17  Score=144.54  Aligned_cols=174  Identities=13%  Similarity=0.136  Sum_probs=120.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------C-CCcEEeecCCCCHHHHHHHhc------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------G-TYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~-~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      .+.+|+|+||||+|+||++++++|+++|++|++++|+++++.+..      + ..++++.+|++|.++++++++      
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999999987654321      2 258889999999988877765      


Q ss_pred             -CCcEEEEcC-Cc----h---------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 -GVRSIICPS-EG----F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 -~~d~Vi~~~-~~----~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                       ++|++||+. +.    +                     +..    .+++ +.++||++||..+..+..+...|..+|..
T Consensus       105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~asK~a  183 (286)
T 1xu9_A          105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASKFA  183 (286)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHH-CCCEEEEECCcccccCCCCccHHHHHHHH
Confidence             789999972 20    0                     111    1222 24799999999887665555566554432


Q ss_pred             H--HHHHHHHHH--HhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          212 K--LAEQDESML--MASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       212 ~--~~~~ae~~l--~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      .  +.+.....+  ...++++++|+||++........    ..+......++++|+|+.++.++..+
T Consensus       184 ~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          184 LDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKA----VSGIVHMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHH----SCGGGGGGCBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHh----ccccccCCCCCHHHHHHHHHHHHhcC
Confidence            1  122222222  45789999999998762211000    01112235689999999999999764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.72  E-value=1.4e-16  Score=143.16  Aligned_cols=181  Identities=11%  Similarity=0.030  Sum_probs=121.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-------CCCcEEeecCCCCHHHHHHHhc------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      .+.+|+++||||+|+||++++++|+++|++|++++|+++++.+..       ...+.++.+|++|.++++++++      
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF  109 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            456899999999999999999999999999999999987644321       2235889999999998887765      


Q ss_pred             -CCcEEEEcCC-----c-h-------------------------HHhhhhhcC--CCEEEEecccccccCCCCchhccch
Q 022625          163 -GVRSIICPSE-----G-F-------------------------ISNAGSLKG--VQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       163 -~~d~Vi~~~~-----~-~-------------------------~~~~~~~~g--v~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                       .+|++||+++     . +                         +...+++.+  ..+||++||..+..+..+...|..+
T Consensus       110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as  189 (281)
T 4dry_A          110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTAT  189 (281)
T ss_dssp             SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHH
Confidence             5699999832     1 0                         111233333  4799999999887776666666555


Q ss_pred             hHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceee---ccCCCCCCCcCHHHHHHHHHHHhhCCCC
Q 022625          209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQF---EEGCAANGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       209 ~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~---~~g~~~~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      |..  .+.+.....+...|++++.|+||++............   ........+++++|+|+++++++..+..
T Consensus       190 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~  262 (281)
T 4dry_A          190 KHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPLS  262 (281)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECTTSCEEECCCBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhhhhcccccCCCCHHHHHHHHHHHhCCCcc
Confidence            432  1222333334557999999999987632211100000   0111223467999999999999998764

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.72  E-value=1.3e-16  Score=141.85  Aligned_cols=198  Identities=13%  Similarity=0.074  Sum_probs=127.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc---hhhh------cCCCcEEeecCCCCHHHHHHHhc---
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---AMES------FGTYVESMAGDASNKKFLKTALR---  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~---~~~~------~~~~v~~v~~D~~d~~~l~~~l~---  162 (294)
                      ..+.+|+++||||+++||++++++|+++|++|+++.|....   +.+.      .+..+.++.+|++|.++++++++   
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   86 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE   86 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999876432   2111      13468889999999999888775   


Q ss_pred             ----CCcEEEEcCC-----ch---------------------HHhhhhh--cCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 ----GVRSIICPSE-----GF---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 ----~~d~Vi~~~~-----~~---------------------~~~~~~~--~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                          .+|++||+++     .+                     +.+++..  .+..+||++||..+..+......|..+|.
T Consensus        87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y~asKa  166 (262)
T 3ksu_A           87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKA  166 (262)
T ss_dssp             HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC-----C
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchhHHHHH
Confidence                6799999832     10                     1111211  13468999999877654444445544443


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCC----CC-CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcEEE
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTP----GG-KQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFE  282 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~----~~-~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~~~  282 (294)
                      .  .+.+.....+...|++++.|+||.+....    .. .....+........+.+++|+|+++++++.... ..|+.++
T Consensus       167 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~itG~~i~  246 (262)
T 3ksu_A          167 PVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTDGWWINGQTIF  246 (262)
T ss_dssp             HHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEE
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCCCCCccCCEEE
Confidence            1  12223333334478999999999875211    11 110111112223446789999999999998632 4699999


Q ss_pred             EecCCccccc
Q 022625          283 VCEISNLCEQ  292 (294)
Q Consensus       283 v~~g~~~~~e  292 (294)
                      +.+|.....+
T Consensus       247 vdGg~~~~~~  256 (262)
T 3ksu_A          247 ANGGYTTREG  256 (262)
T ss_dssp             ESTTCCCC--
T ss_pred             ECCCccCCCc
Confidence            9998765544

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.72  E-value=5.4e-17  Score=142.19  Aligned_cols=184  Identities=11%  Similarity=0.054  Sum_probs=124.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc---------CCcEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---------GVRSI  167 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~---------~~d~V  167 (294)
                      ..+|+++||||+|+||++++++|+++|++|+++.|++++..    ....++.+|++|.++++++++         ++|++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l   80 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   80 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            35789999999999999999999999999999999986643    235778899999988887765         68999


Q ss_pred             EEcCC---------ch------------------HHhhhhhc--CCCEEEEecccccccCCCCchhccchhHHH--HHHH
Q 022625          168 ICPSE---------GF------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQ  216 (294)
Q Consensus       168 i~~~~---------~~------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~  216 (294)
                      ||+++         ..                  +.+++...  .-.+||++||..++.+......|..+|..-  +.+.
T Consensus        81 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~  160 (241)
T 1dhr_A           81 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQS  160 (241)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             EEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHHHHHHHHHHHH
Confidence            99832         10                  11111111  126999999998876655555564443211  1111


Q ss_pred             HHHHHH--hCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          217 DESMLM--ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       217 ae~~l~--~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      ....+.  ..|+++++|+||++.......    ..........++++|+|+++++++..+.  ..|+.+.+.++..
T Consensus       161 la~e~~~~~~gi~v~~v~PG~v~T~~~~~----~~~~~~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~~  232 (241)
T 1dhr_A          161 LAGKNSGMPSGAAAIAVLPVTLDTPMNRK----SMPEADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTDG  232 (241)
T ss_dssp             HTSTTSSCCTTCEEEEEEESCEECHHHHH----HSTTSCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEETT
T ss_pred             HHHHhccCCCCeEEEEEecCcccCccccc----cCcchhhccCCCHHHHHHHHHHHhcCCCcCccceEEEEeCCCC
Confidence            111122  457999999999876211000    0011112345789999999999997654  4689999988754

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.72  E-value=2.1e-16  Score=145.18  Aligned_cols=191  Identities=10%  Similarity=-0.013  Sum_probs=132.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEE-cCccchhhh-------cCCCcEEeecCCCCHH-------------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMES-------FGTYVESMAGDASNKK-------------  155 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~-R~~~~~~~~-------~~~~v~~v~~D~~d~~-------------  155 (294)
                      +.+|+++||||+|+||++++++|+++|++|++++ |+++++.+.       .+..+.++.+|++|.+             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            5689999999999999999999999999999999 987654321       2346889999999988             


Q ss_pred             ----HHHHHhc-------CCcEEEEcCC----------c--------------h--------------------HHhhhh
Q 022625          156 ----FLKTALR-------GVRSIICPSE----------G--------------F--------------------ISNAGS  180 (294)
Q Consensus       156 ----~l~~~l~-------~~d~Vi~~~~----------~--------------~--------------------~~~~~~  180 (294)
                          +++++++       .+|++||+++          .              .                    +...+.
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  203 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  203 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                8877765       7899999822          0              0                    011133


Q ss_pred             hcC------CCEEEEecccccccCCCCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce---eec
Q 022625          181 LKG------VQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF---QFE  249 (294)
Q Consensus       181 ~~g------v~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~---~~~  249 (294)
                      +.+      ..+||++||..++.+..+...|..+|..  .+.+.....+...|+++++|+||++.... .....   .+.
T Consensus       204 ~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~~~~~~~~~  282 (328)
T 2qhx_A          204 GTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPPAVWEGHR  282 (328)
T ss_dssp             HSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSCHHHHHHHH
T ss_pred             hcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cccHHHHHHHH
Confidence            444      6899999999887766555566554432  12223333344579999999999987332 11100   011


Q ss_pred             cCCCCC-CCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          250 EGCAAN-GSLSKEDAAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       250 ~g~~~~-~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      ...... .+.+++|+|+++++++....  ..|+++.+.+|..
T Consensus       283 ~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  324 (328)
T 2qhx_A          283 SKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  324 (328)
T ss_dssp             TTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence            111222 46799999999999996533  5689999988754

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.71  E-value=6.5e-16  Score=139.71  Aligned_cols=196  Identities=8%  Similarity=-0.035  Sum_probs=132.5

Q ss_pred             CCCcCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCccchhhh---c--CCCcEEeecCCCCHHHHHHHhc---
Q 022625           93 EFPEEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR---  162 (294)
Q Consensus        93 ~~~~~~~~~vlVtGatG--~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~--~~~v~~v~~D~~d~~~l~~~l~---  162 (294)
                      ....+.+|+++||||+|  +||++++++|+++|++|+++.|+.+.....   .  ...+.++.+|++|.++++++++   
T Consensus        24 ~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  103 (296)
T 3k31_A           24 TGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLA  103 (296)
T ss_dssp             CCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             chhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            34456789999999997  999999999999999999999987532211   1  1246889999999998888775   


Q ss_pred             ----CCcEEEEcCC---------ch---------------------HHhhhhhc--CCCEEEEecccccccCCCCchhcc
Q 022625          163 ----GVRSIICPSE---------GF---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALM  206 (294)
Q Consensus       163 ----~~d~Vi~~~~---------~~---------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~  206 (294)
                          .+|++||+++         .+                     +.+++...  ...+||++||..+..+......|.
T Consensus       104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~~Y~  183 (296)
T 3k31_A          104 EEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYNVMG  183 (296)
T ss_dssp             HHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTTHHH
T ss_pred             HHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCchhhH
Confidence                5799999832         11                     11112111  135999999998877665555665


Q ss_pred             chhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce------eeccCCCCCCCcCHHHHHHHHHHHhhCCC--C
Q 022625          207 KGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF------QFEEGCAANGSLSKEDAAFICVEALESIP--Q  276 (294)
Q Consensus       207 ~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~  276 (294)
                      .+|..  .+.+.....+...|+++++|+||++..........      .+........+.+++|+|+++++++....  .
T Consensus       184 asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~i  263 (296)
T 3k31_A          184 VCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLGRGT  263 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCc
Confidence            44431  12233333345579999999999987322111100      00111223446789999999999997643  5


Q ss_pred             CCcEEEEecCCc
Q 022625          277 TGLIFEVCEISN  288 (294)
Q Consensus       277 ~g~~~~v~~g~~  288 (294)
                      .|+++++.+|-.
T Consensus       264 tG~~i~vdGG~~  275 (296)
T 3k31_A          264 TGETVHVDCGYH  275 (296)
T ss_dssp             CSCEEEESTTGG
T ss_pred             cCCEEEECCCcc
Confidence            799999988743

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.71  E-value=2.5e-16  Score=139.67  Aligned_cols=193  Identities=13%  Similarity=0.052  Sum_probs=130.9

Q ss_pred             cCCCCeEEEEcCCCh--HHHHHHHHHHHCCCeEEEEEcCccchhh------hcCC-CcEEeecCCCCHHHHHHHhc----
Q 022625           96 EEARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDKRNAME------SFGT-YVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~--IG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~-~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      .+.+|+++||||+|+  ||++++++|+++|++|+++.|+......      ..+. .+.++.+|++|.++++++++    
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            456899999999977  9999999999999999999998643211      1222 68999999999988887765    


Q ss_pred             ---CCcEEEEcCC--------c-h---------------------HHhhhhhc--CCCEEEEecccccccCCCCchhccc
Q 022625          163 ---GVRSIICPSE--------G-F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMK  207 (294)
Q Consensus       163 ---~~d~Vi~~~~--------~-~---------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~~  207 (294)
                         .+|++||+++        + +                     +..++...  .-.+||++||..+..+......|..
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  163 (266)
T 3oig_A           84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVMGV  163 (266)
T ss_dssp             HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHHHHH
T ss_pred             HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcchhHH
Confidence               6799999822        1 0                     11122211  2358999999988776666556655


Q ss_pred             hhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-c-----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          208 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G-----FQFEEGCAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       208 ~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~-----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                      +|..  .+.+.....+...|+++++|+||.+........ .     ..+........+.+++|+|+++++++..+.  ..
T Consensus       164 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~~~~t  243 (266)
T 3oig_A          164 AKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGIT  243 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCchhcCc
Confidence            4431  122233333455799999999998763211110 0     001111223456799999999999997643  57


Q ss_pred             CcEEEEecCCc
Q 022625          278 GLIFEVCEISN  288 (294)
Q Consensus       278 g~~~~v~~g~~  288 (294)
                      |+++++.+|-.
T Consensus       244 G~~i~vdGG~~  254 (266)
T 3oig_A          244 GENLHVDSGFH  254 (266)
T ss_dssp             SCEEEESTTGG
T ss_pred             CCEEEECCCeE
Confidence            99999988854

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.71  E-value=3e-16  Score=140.85  Aligned_cols=192  Identities=12%  Similarity=0.004  Sum_probs=127.5

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCcc---chhhhc--CCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGat--G~IG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~--~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|+++||||+  |+||++++++|+++|++|++++|+.+   ...+..  ...+.++.+|++|.++++++++       
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            568999999999  99999999999999999999999874   121111  1247889999999998887775       


Q ss_pred             CCcEEEEcCC--------c-h---------------------HHhhhhhc---CCCEEEEecccccccCCCCchhccchh
Q 022625          163 GVRSIICPSE--------G-F---------------------ISNAGSLK---GVQHVILLSQLSVYRGSGGIQALMKGN  209 (294)
Q Consensus       163 ~~d~Vi~~~~--------~-~---------------------~~~~~~~~---gv~r~V~vSs~~~~~~~~~~~~~~~~~  209 (294)
                      ++|++||+++        + +                     +.+++...   +..+||++||..+..+......|..+|
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  178 (285)
T 2p91_A           99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGIAK  178 (285)
T ss_dssp             CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHHHHH
Confidence            6799999832        1 1                     11112111   237999999988766555444554444


Q ss_pred             HH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc-e-----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCc
Q 022625          210 AR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG-F-----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL  279 (294)
Q Consensus       210 ~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~-~-----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~  279 (294)
                      ..  .+.+.....+...|+++++|+||.+......... .     .+........+.+++|+|+++++++....  ..|+
T Consensus       179 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~tG~  258 (285)
T 2p91_A          179 AALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAITGE  258 (285)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCCCC
Confidence            31  1222223334457999999999998732211100 0     00011122346799999999999886533  4689


Q ss_pred             EEEEecCCc
Q 022625          280 IFEVCEISN  288 (294)
Q Consensus       280 ~~~v~~g~~  288 (294)
                      .|++.+|-.
T Consensus       259 ~~~vdgg~~  267 (285)
T 2p91_A          259 VVHVDNGYH  267 (285)
T ss_dssp             EEEESTTGG
T ss_pred             EEEECCCcc
Confidence            999988743

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.71  E-value=1.9e-16  Score=141.13  Aligned_cols=193  Identities=9%  Similarity=0.006  Sum_probs=127.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhh------hcCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~------~~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.++... ..+      ..+..+.++.+|++|.++++++++     
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999998775432 221      124578899999999998887775     


Q ss_pred             --CCcEEEEcCCc-----h---------------------HHhhhhhc--CCCEEEEeccccc-ccCCCCchhccchhHH
Q 022625          163 --GVRSIICPSEG-----F---------------------ISNAGSLK--GVQHVILLSQLSV-YRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 --~~d~Vi~~~~~-----~---------------------~~~~~~~~--gv~r~V~vSs~~~-~~~~~~~~~~~~~~~~  211 (294)
                        .+|++||+++.     +                     +.+++...  .-.+||++||... ..+......|..+|..
T Consensus        94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa  173 (270)
T 3is3_A           94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGA  173 (270)
T ss_dssp             HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhHHHHHH
Confidence              67999998321     0                     11222222  1359999999873 3344444555444431


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCC---------cce-------eeccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK---------QGF-------QFEEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~---------~~~-------~~~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                        .+.+.....+...|++++.|+||.+.......         ...       .+........+.+++|+|+++++++..
T Consensus       174 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~  253 (270)
T 3is3_A          174 VDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSK  253 (270)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Confidence              12223333344579999999999876321100         000       001112234456899999999998865


Q ss_pred             CC--CCCcEEEEecCC
Q 022625          274 IP--QTGLIFEVCEIS  287 (294)
Q Consensus       274 ~~--~~g~~~~v~~g~  287 (294)
                      ..  ..|+++++.+|-
T Consensus       254 ~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          254 EGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             ccCCccCcEEEeCCCC
Confidence            43  469999998873

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.71  E-value=7.9e-17  Score=141.38  Aligned_cols=185  Identities=13%  Similarity=0.045  Sum_probs=110.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHH---HHh---cCCcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLK---TAL---RGVRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~---~~l---~~~d~Vi~  169 (294)
                      +.+|+++||||+|+||++++++|++ |+.|+++.|++++...... .++.++.+|+++.....   +.+   ..+|++||
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~   81 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH   81 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence            4579999999999999999999987 9999999999877554432 46888999998875421   122   36799999


Q ss_pred             cCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHH--HHHHH
Q 022625          170 PSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--LAEQD  217 (294)
Q Consensus       170 ~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~--~~~~a  217 (294)
                      +++.             +                 +...+++.+ .+||++||..++.+......|..+|...  +.+..
T Consensus        82 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l  160 (245)
T 3e9n_A           82 AAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGLADAF  160 (245)
T ss_dssp             CC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHHHHHHHHHH
Confidence            8321             0                 111233444 7999999998877666656665544321  22222


Q ss_pred             HHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEe
Q 022625          218 ESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVC  284 (294)
Q Consensus       218 e~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~  284 (294)
                      ...+...|+++++|+||.+....................+++++|+|+++++++..+. .+.+|++.
T Consensus       161 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~~~~~-~~~~~~i~  226 (245)
T 3e9n_A          161 RKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIRFVIDAGE-TTQITNVD  226 (245)
T ss_dssp             HHHHGGGTCEEEEEEECCC----------------CCGGGSCHHHHHHHHHHHHTSCT-TEEEEEEE
T ss_pred             HHHhhhcCeEEEEEecCCccCchhhhhhhhhhcccccccCCCHHHHHHHHHHHHcCCC-ccceeeeE
Confidence            2333457899999999988732211111111111223457899999999999997754 45677764

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.71  E-value=2.1e-16  Score=141.04  Aligned_cols=191  Identities=13%  Similarity=0.022  Sum_probs=125.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-ccchhhh------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~-~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      ...+|+++||||+|+||++++++|+++|++|++..+. .+...+.      .+..+.++.+|++|.++++++++      
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3467999999999999999999999999999998554 4332221      23468899999999998887775      


Q ss_pred             -CCcEEEEcCCc-----h---------------------HHhhhhh--cCCCEEEEecccccccCCCCchhccchhHHH-
Q 022625          163 -GVRSIICPSEG-----F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARK-  212 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~---------------------~~~~~~~--~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~-  212 (294)
                       .+|++||+++.     +                     +..++..  ..-.+||++||..+..+......|..+|..- 
T Consensus       104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  183 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVE  183 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHHHH
Confidence             67999998321     0                     1111111  1125899999988776655555665444311 


Q ss_pred             -HHHHHHHHHHhCCCCEEEEEccceecCCCCC-----cceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          213 -LAEQDESMLMASGIPYTIIRTGVLQNTPGGK-----QGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       213 -~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-----~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                       +.+.....+...|++++.|+||.+.......     ....+........+.+++|+|+++++++....  ..|+++.+.
T Consensus       184 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd  263 (267)
T 3u5t_A          184 AMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRAN  263 (267)
T ss_dssp             HHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEES
T ss_pred             HHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEeC
Confidence             1222222233468999999999876322110     00111222333456789999999999987654  478999998


Q ss_pred             cC
Q 022625          285 EI  286 (294)
Q Consensus       285 ~g  286 (294)
                      +|
T Consensus       264 GG  265 (267)
T 3u5t_A          264 GG  265 (267)
T ss_dssp             SS
T ss_pred             CC
Confidence            77

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.71  E-value=2.1e-16  Score=140.08  Aligned_cols=191  Identities=12%  Similarity=0.117  Sum_probs=126.8

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCcc---chhhhc--CCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGat--G~IG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~--~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|+++||||+  |+||++++++|+++|++|+++.|+++   ...+..  ...+.++.+|++|.++++++++       
T Consensus         6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (261)
T 2wyu_A            6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (261)
T ss_dssp             CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467999999999  99999999999999999999999874   222111  1247889999999998888776       


Q ss_pred             CCcEEEEcCC--------c-h---------------------HHhhhhhc--CCCEEEEecccccccCCCCchhccchhH
Q 022625          163 GVRSIICPSE--------G-F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 ~~d~Vi~~~~--------~-~---------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                      ++|++||+++        + +                     +.+++...  +-.+||++||..+..+......|..+|.
T Consensus        86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  165 (261)
T 2wyu_A           86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKA  165 (261)
T ss_dssp             SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHHHHHHH
Confidence            6799999832        1 1                     11112111  1259999999887765555555544443


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-ce-----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GF-----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~~-----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      .  .+.+.....+...|+++++|+||.+........ ..     .+........+.+++|+|+++++++..+.  ..|++
T Consensus       166 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~  245 (261)
T 2wyu_A          166 ALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEV  245 (261)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCE
Confidence            1  122222233445799999999999873211100 00     00011122346789999999999987543  46899


Q ss_pred             EEEecCC
Q 022625          281 FEVCEIS  287 (294)
Q Consensus       281 ~~v~~g~  287 (294)
                      |++.+|.
T Consensus       246 ~~vdgG~  252 (261)
T 2wyu_A          246 VYVDAGY  252 (261)
T ss_dssp             EEESTTG
T ss_pred             EEECCCc
Confidence            9998874

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.71  E-value=8.9e-17  Score=147.04  Aligned_cols=194  Identities=14%  Similarity=0.052  Sum_probs=127.7

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC----------ccchhhh------cCCCcEEeecCCCCHHHHH
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD----------KRNAMES------FGTYVESMAGDASNKKFLK  158 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~----------~~~~~~~------~~~~v~~v~~D~~d~~~l~  158 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|++++|+          .+.+.+.      .+..+.++.+|++|.+++.
T Consensus        23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  102 (322)
T 3qlj_A           23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAA  102 (322)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            34678999999999999999999999999999999987          3322211      2346788999999999888


Q ss_pred             HHhc-------CCcEEEEcCCc-----h---------------------HHhh----hhhc---C---CCEEEEeccccc
Q 022625          159 TALR-------GVRSIICPSEG-----F---------------------ISNA----GSLK---G---VQHVILLSQLSV  195 (294)
Q Consensus       159 ~~l~-------~~d~Vi~~~~~-----~---------------------~~~~----~~~~---g---v~r~V~vSs~~~  195 (294)
                      ++++       .+|++||+++.     +                     +.++    +.+.   +   -.+||++||..+
T Consensus       103 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  182 (322)
T 3qlj_A          103 GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG  182 (322)
T ss_dssp             HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence            7775       77999998321     0                     1111    1111   1   159999999887


Q ss_pred             ccCCCCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCC-cceeeccCCCCCCCcCHHHHHHHHHHHhh
Q 022625          196 YRGSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGK-QGFQFEEGCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       196 ~~~~~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~-~~~~~~~g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                      ..+......|..+|..  .+.+.....+...|++++.|+|| +....... ..............++++|+|.++++++.
T Consensus       183 ~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~~~~~~~~~~~pedva~~v~~L~s  261 (322)
T 3qlj_A          183 LQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMATQDQDFDAMAPENVSPLVVWLGS  261 (322)
T ss_dssp             HHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------CCTTCGGGTHHHHHHHTS
T ss_pred             ccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhhccccccCCCCHHHHHHHHHHHhC
Confidence            7665555566554431  12222333344579999999999 43221111 10111111222345789999999999887


Q ss_pred             CCC--CCCcEEEEecCCcc
Q 022625          273 SIP--QTGLIFEVCEISNL  289 (294)
Q Consensus       273 ~~~--~~g~~~~v~~g~~~  289 (294)
                      ...  ..|++|++.+|...
T Consensus       262 ~~~~~itG~~i~vdGG~~~  280 (322)
T 3qlj_A          262 AEARDVTGKVFEVEGGKIR  280 (322)
T ss_dssp             GGGGGCCSCEEEEETTEEE
T ss_pred             ccccCCCCCEEEECCCccc
Confidence            644  47999999888543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.71  E-value=1e-16  Score=140.41  Aligned_cols=185  Identities=10%  Similarity=0.016  Sum_probs=126.2

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-------CCCcEEeecCC--CCHHHHHHHhc---
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GTYVESMAGDA--SNKKFLKTALR---  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~v~~v~~D~--~d~~~l~~~l~---  162 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+++++.+..       .....++.+|+  +|.++++++++   
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999987644321       14567777777  88888776654   


Q ss_pred             ----CCcEEEEcCCc------h---------------------H----HhhhhhcCCCEEEEecccccccCCCCchhccc
Q 022625          163 ----GVRSIICPSEG------F---------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMK  207 (294)
Q Consensus       163 ----~~d~Vi~~~~~------~---------------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~  207 (294)
                          .+|++||+++.      +                     +    ...+++.+..+||++||..+..+......|..
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  169 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGV  169 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHH
Confidence                67999998321      0                     1    11235556789999999888776666666655


Q ss_pred             hhHH--HHHHHHHHHHHh-CCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEE
Q 022625          208 GNAR--KLAEQDESMLMA-SGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE  282 (294)
Q Consensus       208 ~~~~--~~~~~ae~~l~~-~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~  282 (294)
                      +|..  .+.+.....+.. .+++++.|+||.+......    ............+++|+|+++++++....  ..|+.++
T Consensus       170 sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~----~~~~~~~~~~~~~p~dva~~~~~l~s~~~~~itG~~i~  245 (247)
T 3i1j_A          170 SKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRA----QAYPDENPLNNPAPEDIMPVYLYLMGPDSTGINGQALN  245 (247)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHH----HHSTTSCGGGSCCGGGGTHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccch----hcccccCccCCCCHHHHHHHHHHHhCchhccccCeeec
Confidence            4432  122222222333 6899999999987622100    00111222345789999999999886543  4677776


Q ss_pred             E
Q 022625          283 V  283 (294)
Q Consensus       283 v  283 (294)
                      +
T Consensus       246 ~  246 (247)
T 3i1j_A          246 A  246 (247)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.70  E-value=4e-16  Score=140.05  Aligned_cols=190  Identities=15%  Similarity=0.102  Sum_probs=129.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+.+++.+.   .+..+.++.+|++|.++++++++       .+|+
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4689999999999999999999999999999999998765443   34578899999999988877664       5699


Q ss_pred             EEEcCCc------------------h-------------HH----hhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          167 IICPSEG------------------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       167 Vi~~~~~------------------~-------------~~----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      +||+++.                  +             +.    ..+.+.+ .++|++||..+..+......|..+|..
T Consensus        83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa  161 (281)
T 3zv4_A           83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHA  161 (281)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCHHHHHHHHH
T ss_pred             EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCchhHHHHHH
Confidence            9998320                  0             01    1122333 799999999887766665566554431


Q ss_pred             H--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcc--------------eeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          212 K--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG--------------FQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       212 ~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~--------------~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      -  +.+.....+... ++++.|+||++.........              ..+........+.+++|+|.++++++..+.
T Consensus       162 ~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~  240 (281)
T 3zv4_A          162 VVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGD  240 (281)
T ss_dssp             HHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTTT
T ss_pred             HHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhcccc
Confidence            1  122222222334 99999999987632211000              001111223446688999999999998333


Q ss_pred             ---CCCcEEEEecCCc
Q 022625          276 ---QTGLIFEVCEISN  288 (294)
Q Consensus       276 ---~~g~~~~v~~g~~  288 (294)
                         ..|+++++.+|-.
T Consensus       241 ~~~itG~~i~vdGG~~  256 (281)
T 3zv4_A          241 SLPATGALLNYDGGMG  256 (281)
T ss_dssp             STTCSSCEEEESSSGG
T ss_pred             cccccCcEEEECCCCc
Confidence               4799999988743

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.70  E-value=6.1e-17  Score=143.78  Aligned_cols=195  Identities=12%  Similarity=0.008  Sum_probs=137.2

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      .++.+|+++||||+++||+++++.|+++|++|++..|+++++.+.      .+.++..+.+|++|+++++++++      
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            357899999999999999999999999999999999998765432      23468889999999988877664      


Q ss_pred             -CCcEEEEcCCc-----h-------------------------HHhhhh-hcCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 -GVRSIICPSEG-----F-------------------------ISNAGS-LKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~-------------------------~~~~~~-~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                       .+|++||+++.     +                         +...+. +.+-.+||++||..+..+......|..+|.
T Consensus        85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKa  164 (255)
T 4g81_D           85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKG  164 (255)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence             45999998321     0                         111232 345679999999988777666666655543


Q ss_pred             --HHHHHHHHHHHHhCCCCEEEEEccceecCCC----CCcc-e-eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          211 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQG-F-QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       211 --~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~----~~~~-~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                        ..+.+.....+...||+++.|.||++.....    .... . .+.......-+-.++|+|.++++++....  ..|+.
T Consensus       165 al~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~iTG~~  244 (255)
T 4g81_D          165 GIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQI  244 (255)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCCE
Confidence              2244445555667899999999998762211    0000 0 00011122334578999999999886544  47999


Q ss_pred             EEEecCCcc
Q 022625          281 FEVCEISNL  289 (294)
Q Consensus       281 ~~v~~g~~~  289 (294)
                      +.|.+|-.+
T Consensus       245 i~VDGG~~A  253 (255)
T 4g81_D          245 IYVDGGWLA  253 (255)
T ss_dssp             EEESTTGGG
T ss_pred             EEECCCeEe
Confidence            999888543

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.70  E-value=2.5e-16  Score=141.11  Aligned_cols=191  Identities=15%  Similarity=0.084  Sum_probs=133.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      .+.+|+++||||+++||+++++.|+++|++|++..|+.+++.+.   .+.+...+++|++|.++++++++       .+|
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD  105 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID  105 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999999999999999999999998775543   35578889999999988877664       459


Q ss_pred             EEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHH
Q 022625          166 SIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL  213 (294)
Q Consensus       166 ~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~  213 (294)
                      ++|++++.     +                         ....+++.  .++|++||..+..+......|..+|.  ..+
T Consensus       106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--G~IInisS~~~~~~~~~~~~Y~asKaav~~l  183 (273)
T 4fgs_A          106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG--SSVVLTGSTAGSTGTPAFSVYAASKAALRSF  183 (273)
T ss_dssp             EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEECCGGGGSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--CeEEEEeehhhccCCCCchHHHHHHHHHHHH
Confidence            99998321     0                         11123333  58999999988776666666655543  223


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCC----cce-------eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF-------QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----~~~-------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      .+.....+...||+++.|.||++.......    ...       .+.......-+-.++|+|.++++++.+..  ..|+.
T Consensus       184 tr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~iTG~~  263 (273)
T 4fgs_A          184 ARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVTGAE  263 (273)
T ss_dssp             HHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCe
Confidence            333444455689999999999875221100    000       00011122335579999999999987644  47999


Q ss_pred             EEEecCCc
Q 022625          281 FEVCEISN  288 (294)
Q Consensus       281 ~~v~~g~~  288 (294)
                      +.|.+|-.
T Consensus       264 i~VDGG~s  271 (273)
T 4fgs_A          264 LFVDGGSA  271 (273)
T ss_dssp             EEESTTTT
T ss_pred             EeECcChh
Confidence            99988754

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.70  E-value=4.4e-16  Score=144.18  Aligned_cols=187  Identities=12%  Similarity=0.025  Sum_probs=125.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh-------------hcCCCcEEeecCCCCHHHHHHHh
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------------SFGTYVESMAGDASNKKFLKTAL  161 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~-------------~~~~~v~~v~~D~~d~~~l~~~l  161 (294)
                      ..+.+|+++||||+|+||++++++|+++|++|+++.|+.++..+             ..+..+.++.+|++|.+++++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~  120 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV  120 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            45678999999999999999999999999999999998875221             12346888999999999888877


Q ss_pred             c-------CCcEEEEcCCc-----h---------------------H----HhhhhhcCCCEEEEecccccccC--CCCc
Q 022625          162 R-------GVRSIICPSEG-----F---------------------I----SNAGSLKGVQHVILLSQLSVYRG--SGGI  202 (294)
Q Consensus       162 ~-------~~d~Vi~~~~~-----~---------------------~----~~~~~~~gv~r~V~vSs~~~~~~--~~~~  202 (294)
                      +       ++|+|||+++.     +                     +    ...+++.+..+||++||..+..+  ....
T Consensus       121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~  200 (346)
T 3kvo_A          121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQH  200 (346)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSS
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCc
Confidence            5       78999998321     0                     1    11235567789999999887654  3344


Q ss_pred             hhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCc
Q 022625          203 QALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGL  279 (294)
Q Consensus       203 ~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~  279 (294)
                      ..|..+|..  .+.+.....+. .+++++.|.||.+.+.+...   .+..........+++|+|+++++++.... ..|+
T Consensus       201 ~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~---~~~~~~~~~r~~~pedvA~~v~~L~s~~~~itG~  276 (346)
T 3kvo_A          201 CAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMD---MLGGPGIESQCRKVDIIADAAYSIFQKPKSFTGN  276 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHH---HHCC--CGGGCBCTHHHHHHHHHHHTSCTTCCSC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHH---hhccccccccCCCHHHHHHHHHHHHhcCCCCCce
Confidence            455444331  11122222233 78999999999633221100   01111122345689999999999998733 4677


Q ss_pred             EEEEecC
Q 022625          280 IFEVCEI  286 (294)
Q Consensus       280 ~~~v~~g  286 (294)
                      ++ +.++
T Consensus       277 ~i-vdgg  282 (346)
T 3kvo_A          277 FV-IDEN  282 (346)
T ss_dssp             EE-EHHH
T ss_pred             EE-ECCc
Confidence            76 6554

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.70  E-value=2.7e-16  Score=141.82  Aligned_cols=192  Identities=10%  Similarity=-0.013  Sum_probs=131.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEE-cCccchhhh-------cCCCcEEeecCCCCHH------------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMES-------FGTYVESMAGDASNKK------------  155 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~-R~~~~~~~~-------~~~~v~~v~~D~~d~~------------  155 (294)
                      .+.+|+++||||+|+||++++++|+++|++|++++ |+++++.+.       .+..+.++.+|++|.+            
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence            35679999999999999999999999999999999 987654321       2456889999999988            


Q ss_pred             -----HHHHHhc-------CCcEEEEcCC----------c--------------h--------------------HHhhh
Q 022625          156 -----FLKTALR-------GVRSIICPSE----------G--------------F--------------------ISNAG  179 (294)
Q Consensus       156 -----~l~~~l~-------~~d~Vi~~~~----------~--------------~--------------------~~~~~  179 (294)
                           ++.++++       .+|++||+++          .              .                    +...+
T Consensus        86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m  165 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  165 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                 8877765       6799999821          0              0                    01113


Q ss_pred             hhcC------CCEEEEecccccccCCCCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce---ee
Q 022625          180 SLKG------VQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF---QF  248 (294)
Q Consensus       180 ~~~g------v~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~---~~  248 (294)
                      .+.+      ..+||++||..++.+..+...|..+|..  .+.+.....+...|++++.|+||++.... .....   .+
T Consensus       166 ~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~~~~~~~~~~  244 (291)
T 1e7w_A          166 AGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPPAVWEGH  244 (291)
T ss_dssp             HTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-GSCHHHHHHH
T ss_pred             HhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-cCCHHHHHHH
Confidence            3444      5899999999887766565666555432  12233333445579999999999976322 10000   00


Q ss_pred             ccCCCCC-CCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          249 EEGCAAN-GSLSKEDAAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       249 ~~g~~~~-~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      ....... .+.+++|+|+++++++..+.  ..|+.+.+.+|-.
T Consensus       245 ~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  287 (291)
T 1e7w_A          245 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  287 (291)
T ss_dssp             HTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcc
Confidence            1111222 46789999999999987543  4789999988743

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.70  E-value=4e-16  Score=137.22  Aligned_cols=191  Identities=16%  Similarity=0.059  Sum_probs=128.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEE-cCccchhhh------cCCCcEEeecCCCCHHHHHHHhcC------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMES------FGTYVESMAGDASNKKFLKTALRG------  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~-R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~~------  163 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++. |+.++..+.      .+..+.++.+|++|.++++++++.      
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999864 555443221      234678899999999888776642      


Q ss_pred             -------CcEEEEcCCc-----h---------------------HHhhhhh--cCCCEEEEecccccccCCCCchhccch
Q 022625          164 -------VRSIICPSEG-----F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       164 -------~d~Vi~~~~~-----~---------------------~~~~~~~--~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                             +|++||+++-     +                     +.+++..  .+..+||++||..+..+......|..+
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~as  164 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMT  164 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchhHHh
Confidence                   8999998321     0                     1111211  123589999999887776666666555


Q ss_pred             hHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc------eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG------FQFEEGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       209 ~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~------~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      |..  .+.+.....+...|++++.|+||.+.........      ...........+.+++|+|+++++++....  ..|
T Consensus       165 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG  244 (255)
T 3icc_A          165 KGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTG  244 (255)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCCccC
Confidence            432  1222333334557999999999998633221110      001112223456789999999999886543  579


Q ss_pred             cEEEEecCC
Q 022625          279 LIFEVCEIS  287 (294)
Q Consensus       279 ~~~~v~~g~  287 (294)
                      +++++.+|.
T Consensus       245 ~~i~vdgG~  253 (255)
T 3icc_A          245 QLIDVSGGS  253 (255)
T ss_dssp             CEEEESSST
T ss_pred             CEEEecCCe
Confidence            999998874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.69  E-value=1.5e-16  Score=140.63  Aligned_cols=187  Identities=12%  Similarity=0.082  Sum_probs=125.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      +|+++||||+|+||++++++|+++|  +.|+++.|+.+++.+.   .+..+.++.+|++|.++++++++       .+|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            6899999999999999999999985  7899899998765433   23468899999999998887775       6799


Q ss_pred             EEEcCCc------h---------------------H----HhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHH
Q 022625          167 IICPSEG------F---------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE  215 (294)
Q Consensus       167 Vi~~~~~------~---------------------~----~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~  215 (294)
                      +||+++.      +                     +    ...+++.+ .+||++||..+..+......|..+|..-. .
T Consensus        82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~-~  159 (254)
T 3kzv_A           82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALN-H  159 (254)
T ss_dssp             EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHHH-H
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHHH-H
Confidence            9998221      0                     1    11234455 89999999988776666666654443111 1


Q ss_pred             HHHHHHHh-CCCCEEEEEccceecCCCCCccee-------------eccCCCCCCCcCHHHHHHHHHHHhhCCC---CCC
Q 022625          216 QDESMLMA-SGIPYTIIRTGVLQNTPGGKQGFQ-------------FEEGCAANGSLSKEDAAFICVEALESIP---QTG  278 (294)
Q Consensus       216 ~ae~~l~~-~gl~~tivRPg~l~~~~~~~~~~~-------------~~~g~~~~~~Is~eDvA~~iv~aL~~~~---~~g  278 (294)
                      ..+.+..+ .+++++.|+||.+...........             +........+.+++|+|+++++++..+.   ..|
T Consensus       160 ~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~~~itG  239 (254)
T 3kzv_A          160 FAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDGVNG  239 (254)
T ss_dssp             HHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCCGGGTT
T ss_pred             HHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhcccCCCCc
Confidence            11111122 689999999998763221110000             0011122346688999999999998763   578


Q ss_pred             cEEEEecCC
Q 022625          279 LIFEVCEIS  287 (294)
Q Consensus       279 ~~~~v~~g~  287 (294)
                      +.+++.+++
T Consensus       240 ~~i~vdg~~  248 (254)
T 3kzv_A          240 QYLSYNDPA  248 (254)
T ss_dssp             CEEETTCGG
T ss_pred             cEEEecCcc
Confidence            999887664

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.69  E-value=8.8e-16  Score=136.16  Aligned_cols=195  Identities=9%  Similarity=0.024  Sum_probs=133.5

Q ss_pred             cCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCHHHHHHHhc----
Q 022625           96 EEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG--~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      ++.+|+++||||+|  +||++++++|+++|++|++..|+++.+.+.       .+.++.++++|++|+++++++++    
T Consensus         3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (256)
T 4fs3_A            3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK   82 (256)
T ss_dssp             CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            56799999999987  899999999999999999999997654322       12468899999999988876654    


Q ss_pred             ---CCcEEEEcCC-----c------------h-------------HHhhhh--hcCCCEEEEecccccccCCCCchhccc
Q 022625          163 ---GVRSIICPSE-----G------------F-------------ISNAGS--LKGVQHVILLSQLSVYRGSGGIQALMK  207 (294)
Q Consensus       163 ---~~d~Vi~~~~-----~------------~-------------~~~~~~--~~gv~r~V~vSs~~~~~~~~~~~~~~~  207 (294)
                         .+|++||+.+     .            +             ....+.  ..+-.+||++||..+..+......|..
T Consensus        83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y~a  162 (256)
T 4fs3_A           83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGV  162 (256)
T ss_dssp             HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHHHH
T ss_pred             HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhhHH
Confidence               5699999722     0            0             000111  112368999999988776666666655


Q ss_pred             hhH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCc----c--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          208 GNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----G--FQFEEGCAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       208 ~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                      +|.  ..+.+.....+...||+++.|.||++........    .  ..+.......-+..++|||.++++++.+..  ..
T Consensus       163 sKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~a~~iT  242 (256)
T 4fs3_A          163 AKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDLSSGVT  242 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcc
Confidence            543  2233444455566899999999998762111100    0  000011122335689999999999887644  47


Q ss_pred             CcEEEEecCCccc
Q 022625          278 GLIFEVCEISNLC  290 (294)
Q Consensus       278 g~~~~v~~g~~~~  290 (294)
                      |+++.|.+|-+.+
T Consensus       243 G~~i~VDGG~~av  255 (256)
T 4fs3_A          243 GENIHVDSGFHAI  255 (256)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CCEEEECcCHHhc
Confidence            9999998886554

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.69  E-value=4.5e-16  Score=137.83  Aligned_cols=187  Identities=14%  Similarity=0.109  Sum_probs=122.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc------CCCcEEeecCCCCHHHHHHHhc--------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALR--------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~v~~v~~D~~d~~~l~~~l~--------  162 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+++++.+..      +..+.++.+|++|.++++++++        
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            45799999999999999999999999999999999987643321      3467889999999988876653        


Q ss_pred             CCcEEEEcCC-ch------------------------------------HHhhhhhcCCCEEEEecccccccCCCCchhc
Q 022625          163 GVRSIICPSE-GF------------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQAL  205 (294)
Q Consensus       163 ~~d~Vi~~~~-~~------------------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~  205 (294)
                      .+|++||+++ +.                                    +...+.+.+..+||++||..+..+. +...|
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~Y  161 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVPY  161 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHHH
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCch
Confidence            4699999862 10                                    1112345567899999998876533 23445


Q ss_pred             cchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCc--ceee-----cc--CCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          206 MKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--GFQF-----EE--GCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       206 ~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~--~~~~-----~~--g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      ..+|..  .+.+.....+...|+++++|+||++........  ....     ..  ........+++|+|+++++++..+
T Consensus       162 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~~  241 (260)
T 2qq5_A          162 GVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDP  241 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHTCT
T ss_pred             HHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCc
Confidence            444321  122222333445799999999998763321110  0000     00  000011246899999999999876


Q ss_pred             CC---CCcEEEEe
Q 022625          275 PQ---TGLIFEVC  284 (294)
Q Consensus       275 ~~---~g~~~~v~  284 (294)
                      ..   .|+.+.+.
T Consensus       242 ~~~~itG~~i~~~  254 (260)
T 2qq5_A          242 NILSLSGKVLPSC  254 (260)
T ss_dssp             TGGGGTTCEEEHH
T ss_pred             ccccccceeechh
Confidence            42   57777654

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.69  E-value=7e-16  Score=136.70  Aligned_cols=196  Identities=12%  Similarity=0.014  Sum_probs=130.5

Q ss_pred             CCCcCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCccchh---hh--cCCCcEEeecCCCCHHHHHHHhc---
Q 022625           93 EFPEEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNAM---ES--FGTYVESMAGDASNKKFLKTALR---  162 (294)
Q Consensus        93 ~~~~~~~~~vlVtGat--G~IG~~l~~~L~~~g~~V~~~~R~~~~~~---~~--~~~~v~~v~~D~~d~~~l~~~l~---  162 (294)
                      ......+|+|+||||+  |+||++++++|+++|++|++++|+.....   +.  ....+.++.+|++|.++++++++   
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   87 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLK   87 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHH
Confidence            3456678999999999  99999999999999999999999854321   11  12358899999999999888775   


Q ss_pred             ----CCcEEEEcCC---------c----h------------------HHhhhhhc--CCCEEEEecccccccCCCCchhc
Q 022625          163 ----GVRSIICPSE---------G----F------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQAL  205 (294)
Q Consensus       163 ----~~d~Vi~~~~---------~----~------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~  205 (294)
                          .+|++||+++         .    .                  +.+++...  ...+||++||..+..+......|
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  167 (271)
T 3ek2_A           88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTM  167 (271)
T ss_dssp             HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHH
T ss_pred             HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCccch
Confidence                5699999822         1    1                  11112111  13589999999887766665566


Q ss_pred             cchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc------eeeccCCCCCCCcCHHHHHHHHHHHhhCC--C
Q 022625          206 MKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG------FQFEEGCAANGSLSKEDAAFICVEALESI--P  275 (294)
Q Consensus       206 ~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~------~~~~~g~~~~~~Is~eDvA~~iv~aL~~~--~  275 (294)
                      ..+|..  .+.+.....+...|+++++|+||++.........      ..+........+.+++|+|+++++++...  .
T Consensus       168 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~~~~  247 (271)
T 3ek2_A          168 GLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASG  247 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             hHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCC
Confidence            544431  1222333334557999999999998732211110      00111223345679999999999999763  3


Q ss_pred             CCCcEEEEecCCc
Q 022625          276 QTGLIFEVCEISN  288 (294)
Q Consensus       276 ~~g~~~~v~~g~~  288 (294)
                      ..|+++++.+|..
T Consensus       248 ~tG~~i~vdgG~~  260 (271)
T 3ek2_A          248 VTAEVMHVDSGFN  260 (271)
T ss_dssp             CCSEEEEESTTGG
T ss_pred             eeeeEEEECCCee
Confidence            5799999998843

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.69  E-value=3.4e-16  Score=138.96  Aligned_cols=191  Identities=12%  Similarity=0.069  Sum_probs=125.5

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCcc---chhhhc--CCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGat--G~IG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~--~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|+++||||+  |+||++++++|+++|++|+++.|++.   ...+..  .....++.+|++|.++++++++       
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            457899999999  99999999999999999999999872   121111  1234788999999999888775       


Q ss_pred             CCcEEEEcCC--------c-----h------------------HHhhhhhc--CCCEEEEecccccccCCCCchhccchh
Q 022625          163 GVRSIICPSE--------G-----F------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGN  209 (294)
Q Consensus       163 ~~d~Vi~~~~--------~-----~------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~~~~  209 (294)
                      ++|++||+++        +     .                  +.+++...  +-.+||++||..++.+......|..+|
T Consensus        87 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  166 (265)
T 1qsg_A           87 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAK  166 (265)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchHHHHHH
Confidence            5799999832        1     1                  11112211  125999999988776555544554443


Q ss_pred             HHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCc-ce-----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCc
Q 022625          210 ARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-GF-----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL  279 (294)
Q Consensus       210 ~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~~-----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~  279 (294)
                      ...  +.+.....+...|+++++|+||.+........ ..     .+........+.+++|+|+++++++..+.  ..|+
T Consensus       167 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~  246 (265)
T 1qsg_A          167 ASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGE  246 (265)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCccCC
Confidence            311  12222223344689999999999873211110 00     00011122346799999999999887543  3689


Q ss_pred             EEEEecCC
Q 022625          280 IFEVCEIS  287 (294)
Q Consensus       280 ~~~v~~g~  287 (294)
                      .|++.+|.
T Consensus       247 ~~~vdgG~  254 (265)
T 1qsg_A          247 VVHVDGGF  254 (265)
T ss_dssp             EEEESTTG
T ss_pred             EEEECCCc
Confidence            99998884

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.69  E-value=6.5e-16  Score=137.99  Aligned_cols=191  Identities=13%  Similarity=0.031  Sum_probs=127.2

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCcc---chhhhc--CCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGat--G~IG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~--~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|+++||||+  |+||++++++|+++|++|++++|+.+   ...+..  ...+.++.+|++|.++++++++       
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457999999999  99999999999999999999999875   222111  1247889999999998887775       


Q ss_pred             CCcEEEEcCC--------c-h---------------------HHhhhhhc--CCCEEEEecccccccCCCCchhccchhH
Q 022625          163 GVRSIICPSE--------G-F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 ~~d~Vi~~~~--------~-~---------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                      .+|++||+++        + +                     +.+++...  +-.+||++||..+..+......|..+|.
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  163 (275)
T 2pd4_A           84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKA  163 (275)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHH
T ss_pred             CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhHHHHH
Confidence            5699999832        1 1                     11122211  1269999999887665555555644443


Q ss_pred             H--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc-e-----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          211 R--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG-F-----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       211 ~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~-~-----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      .  .+.+.....+...|+++++|+||.+......... .     .+........+.+++|+|+++++++..+.  ..|+.
T Consensus       164 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~  243 (275)
T 2pd4_A          164 ALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEV  243 (275)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccCCCCCE
Confidence            2  1222233334557999999999998632211100 0     00001122345789999999999987533  47899


Q ss_pred             EEEecCC
Q 022625          281 FEVCEIS  287 (294)
Q Consensus       281 ~~v~~g~  287 (294)
                      |++.+|.
T Consensus       244 ~~vdgg~  250 (275)
T 2pd4_A          244 HFVDAGY  250 (275)
T ss_dssp             EEESTTG
T ss_pred             EEECCCc
Confidence            9998874

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.69  E-value=7.9e-16  Score=136.01  Aligned_cols=174  Identities=16%  Similarity=0.091  Sum_probs=117.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~-~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      .+|+|+||||+|+||++++++|++ +|++|++++|+.++..+.      .+..++++.+|++|.++++++++       +
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            578999999999999999999999 999999999987654322      13468899999999999888776       7


Q ss_pred             CcEEEEcCCc-----------h---------------HHhhhhhc--CCCEEEEecccccccC--C--------------
Q 022625          164 VRSIICPSEG-----------F---------------ISNAGSLK--GVQHVILLSQLSVYRG--S--------------  199 (294)
Q Consensus       164 ~d~Vi~~~~~-----------~---------------~~~~~~~~--gv~r~V~vSs~~~~~~--~--------------  199 (294)
                      +|+|||+++.           .               +.+++...  ...+||++||..++.+  .              
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  162 (276)
T 1wma_A           83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI  162 (276)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred             CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccccc
Confidence            8999998320           0               11222222  1259999999766421  0              


Q ss_pred             -------------------------CCchhccchhHH--HHHHHHHHHHHh----CCCCEEEEEccceecCCCCCcceee
Q 022625          200 -------------------------GGIQALMKGNAR--KLAEQDESMLMA----SGIPYTIIRTGVLQNTPGGKQGFQF  248 (294)
Q Consensus       200 -------------------------~~~~~~~~~~~~--~~~~~ae~~l~~----~gl~~tivRPg~l~~~~~~~~~~~~  248 (294)
                                               .+...|..+|..  .+.+.....+..    .++++++|+||++.......     
T Consensus       163 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-----  237 (276)
T 1wma_A          163 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-----  237 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-----
T ss_pred             chhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-----
Confidence                                     011233333221  111111122233    58999999999987332111     


Q ss_pred             ccCCCCCCCcCHHHHHHHHHHHhhCCC----CCCcEEE
Q 022625          249 EEGCAANGSLSKEDAAFICVEALESIP----QTGLIFE  282 (294)
Q Consensus       249 ~~g~~~~~~Is~eDvA~~iv~aL~~~~----~~g~~~~  282 (294)
                            ..+.+++|+|+.+++++..+.    ..|+.|.
T Consensus       238 ------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          238 ------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             ------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             ------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence                  246899999999999997552    3566665

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.69  E-value=1.4e-15  Score=139.59  Aligned_cols=188  Identities=15%  Similarity=0.112  Sum_probs=121.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc-----chhh------hcCCCcEEeecCCCCHHHHHHHhc---
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-----NAME------SFGTYVESMAGDASNKKFLKTALR---  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~-----~~~~------~~~~~v~~v~~D~~d~~~l~~~l~---  162 (294)
                      +.+|+++||||+|+||++++++|+++|++|++.+|+..     ++..      ..+..+.++.+|++|.+++.++++   
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999998741     1111      123568999999999999988876   


Q ss_pred             ----CCcEEEEcCC-----ch---------------------HHh----hhhhcCCCEEEEeccccccc-CCCCchhccc
Q 022625          163 ----GVRSIICPSE-----GF---------------------ISN----AGSLKGVQHVILLSQLSVYR-GSGGIQALMK  207 (294)
Q Consensus       163 ----~~d~Vi~~~~-----~~---------------------~~~----~~~~~gv~r~V~vSs~~~~~-~~~~~~~~~~  207 (294)
                          ++|++||+++     .+                     +.+    .+++.+.++||++||..+.. +......|..
T Consensus        83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~a  162 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFA  162 (324)
T ss_dssp             HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHHH
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHHH
Confidence                7899999832     00                     111    23566789999999988763 3344445644


Q ss_pred             hhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCC----CCcce------eecc-CC-------------CCCCCcCHH
Q 022625          208 GNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQGF------QFEE-GC-------------AANGSLSKE  261 (294)
Q Consensus       208 ~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~----~~~~~------~~~~-g~-------------~~~~~Is~e  261 (294)
                      +|..-  +.+.....+...|+++++|+||.+.....    .....      .+.. +.             ......+++
T Consensus       163 sKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~  242 (324)
T 3u9l_A          163 AKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADVS  242 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCTH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCHH
Confidence            44311  22222233445799999999998752111    00000      0000 00             001225789


Q ss_pred             HHHHHHHHHhhCCC-CCCcEEEEe
Q 022625          262 DAAFICVEALESIP-QTGLIFEVC  284 (294)
Q Consensus       262 DvA~~iv~aL~~~~-~~g~~~~v~  284 (294)
                      |+|++++.++..+. .....+.+.
T Consensus       243 ~vA~aiv~~~~~~~~~~~~~~~~g  266 (324)
T 3u9l_A          243 LVADAIVRVVGTASGKRPFRVHVD  266 (324)
T ss_dssp             HHHHHHHHHHTSCTTCCCSEEEEC
T ss_pred             HHHHHHHHHhcCCCCCCCeEEEeC
Confidence            99999999998874 333455554

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.69  E-value=8.6e-16  Score=138.79  Aligned_cols=194  Identities=8%  Similarity=-0.001  Sum_probs=130.4

Q ss_pred             CcCCCCeEEEEcCCCh--HHHHHHHHHHHCCCeEEEEEcCccchh---hhc--CCCcEEeecCCCCHHHHHHHhc-----
Q 022625           95 PEEARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDKRNAM---ESF--GTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~--IG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~--~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ..+.+|+++||||+|+  ||++++++|+++|++|+++.|+++...   +..  ...+.++.+|++|.++++++++     
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK  106 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence            3567899999999977  999999999999999999999854211   111  1357889999999998888775     


Q ss_pred             --CCcEEEEcCC--------c-h---------------------HHhhhhh--cCCCEEEEecccccccCCCCchhccch
Q 022625          163 --GVRSIICPSE--------G-F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       163 --~~d~Vi~~~~--------~-~---------------------~~~~~~~--~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                        .+|++||+++        + +                     +.+++..  ....+||++||..+..+......|..+
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~as  186 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVA  186 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHHHHH
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHHHHH
Confidence              6799999832        0 0                     1111211  124699999999887766555566544


Q ss_pred             hHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc------eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG------FQFEEGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       209 ~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~------~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      |..  .+.+.....+...|+++++|+||++.........      ..+........+.+++|+|+++++++....  ..|
T Consensus       187 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG  266 (293)
T 3grk_A          187 KAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRSVTG  266 (293)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCcc
Confidence            431  1223333334557999999999998732211100      000111223456789999999999987643  579


Q ss_pred             cEEEEecCCc
Q 022625          279 LIFEVCEISN  288 (294)
Q Consensus       279 ~~~~v~~g~~  288 (294)
                      +++++.+|-.
T Consensus       267 ~~i~vdGG~~  276 (293)
T 3grk_A          267 EVHHADSGYH  276 (293)
T ss_dssp             CEEEESTTGG
T ss_pred             eEEEECCCcc
Confidence            9999988754

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.69  E-value=6.1e-16  Score=138.60  Aligned_cols=194  Identities=10%  Similarity=0.054  Sum_probs=131.6

Q ss_pred             CcCCCCeEEEEcCCCh--HHHHHHHHHHHCCCeEEEEEcCc--cchhhhc--CCCcEEeecCCCCHHHHHHHhc------
Q 022625           95 PEEARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDK--RNAMESF--GTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~--IG~~l~~~L~~~g~~V~~~~R~~--~~~~~~~--~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      ..+.+|+++||||+|+  ||++++++|+++|++|+++.|+.  +...+..  ...+.++.+|++|.++++++++      
T Consensus        22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (280)
T 3nrc_A           22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW  101 (280)
T ss_dssp             CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence            4567899999999955  99999999999999999999987  3332221  1358899999999998887775      


Q ss_pred             -CCcEEEEcCC---------ch----------------------HHhhhh---hcCCCEEEEecccccccCCCCchhccc
Q 022625          163 -GVRSIICPSE---------GF----------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMK  207 (294)
Q Consensus       163 -~~d~Vi~~~~---------~~----------------------~~~~~~---~~gv~r~V~vSs~~~~~~~~~~~~~~~  207 (294)
                       .+|++||+++         .+                      +.+++.   ..+..+||++||..+..+......|..
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  181 (280)
T 3nrc_A          102 DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGV  181 (280)
T ss_dssp             SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHHHHH
T ss_pred             CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchhhHH
Confidence             4599999822         11                      111111   113579999999988776666666655


Q ss_pred             hhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc------eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          208 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG------FQFEEGCAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       208 ~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~------~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                      +|..  .+.+.....+...|+++++|+||.+.........      ..+........+.+++|+|+++++++....  ..
T Consensus       182 sKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~t  261 (280)
T 3nrc_A          182 AKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGIT  261 (280)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCcC
Confidence            4431  1222233334557999999999998732111000      000111223456789999999999887543  57


Q ss_pred             CcEEEEecCCc
Q 022625          278 GLIFEVCEISN  288 (294)
Q Consensus       278 g~~~~v~~g~~  288 (294)
                      |+++++.+|..
T Consensus       262 G~~i~vdgG~~  272 (280)
T 3nrc_A          262 GEVVHVDAGYH  272 (280)
T ss_dssp             SCEEEESTTGG
T ss_pred             CcEEEECCCcc
Confidence            99999988854

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.68  E-value=5.5e-16  Score=134.17  Aligned_cols=176  Identities=14%  Similarity=0.100  Sum_probs=120.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc---CCcEEEEcCCc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPSEG  173 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~---~~d~Vi~~~~~  173 (294)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+.+              +|++|.++++++++   .+|++||+++.
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~nAg~   69 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVTAGS   69 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEECCCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            45789999999999999999999999999999998864              89999999988876   67999998321


Q ss_pred             ------h---------------------HHhhhhhc--CCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHh-
Q 022625          174 ------F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA-  223 (294)
Q Consensus       174 ------~---------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~-  223 (294)
                            +                     +.+++...  .-.+||++||..++.+......|..+|..- ....+.+..+ 
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a~-~~~~~~la~e~  148 (223)
T 3uce_A           70 YAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAI-EATTKVLAKEL  148 (223)
T ss_dssp             CCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHH-HHHHHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHHH-HHHHHHHHHhh
Confidence                  0                     11112111  124899999998877666665664444311 1111222222 


Q ss_pred             CCCCEEEEEccceecCCCCCcc--------eeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 022625          224 SGIPYTIIRTGVLQNTPGGKQG--------FQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       224 ~gl~~tivRPg~l~~~~~~~~~--------~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                      ..++++.|+||.+.........        ..+........+.+++|+|+++++++..+...|+++++.+|.
T Consensus       149 ~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~tG~~i~vdgG~  220 (223)
T 3uce_A          149 APIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQNSYMTGTVIDVDGGA  220 (223)
T ss_dssp             TTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTG
T ss_pred             cCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccCCCCCCcEEEecCCe
Confidence            1299999999987632111100        001122233456799999999999998766789999998874

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.67  E-value=6.5e-16  Score=136.98  Aligned_cols=191  Identities=9%  Similarity=0.028  Sum_probs=128.3

Q ss_pred             cCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCccch-hh-------hcCCCcEEeecCCCCHHHHHHHhc---
Q 022625           96 EEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA-ME-------SFGTYVESMAGDASNKKFLKTALR---  162 (294)
Q Consensus        96 ~~~~~~vlVtGat--G~IG~~l~~~L~~~g~~V~~~~R~~~~~-~~-------~~~~~v~~v~~D~~d~~~l~~~l~---  162 (294)
                      .+.+|+++||||+  ++||++++++|+++|++|+++.|+..+. .+       ..+..++++.+|++|.++++++++   
T Consensus        17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (267)
T 3gdg_A           17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV   96 (267)
T ss_dssp             CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence            5678999999999  8999999999999999999998876543 11       124578999999999998887765   


Q ss_pred             ----CCcEEEEcCC-----ch-------------------------HHhhhhhcCCCEEEEecccccccCC--CCchhcc
Q 022625          163 ----GVRSIICPSE-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGS--GGIQALM  206 (294)
Q Consensus       163 ----~~d~Vi~~~~-----~~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~--~~~~~~~  206 (294)
                          .+|++||+++     .+                         +...+++.+..+||++||..+..+.  .....|.
T Consensus        97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~  176 (267)
T 3gdg_A           97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYN  176 (267)
T ss_dssp             HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHH
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcch
Confidence                5699999822     00                         1112355667899999998775543  2334554


Q ss_pred             chhHHHHHHHHHHHHHh--CCCCEEEEEccceecCCCCCc----ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          207 KGNARKLAEQDESMLMA--SGIPYTIIRTGVLQNTPGGKQ----GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       207 ~~~~~~~~~~ae~~l~~--~gl~~tivRPg~l~~~~~~~~----~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                      .+|..- ...++.+-.+  ..++++.|.||++........    ...+........+.+++|+|+++++++....  ..|
T Consensus       177 ~sK~a~-~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~~~~itG  255 (267)
T 3gdg_A          177 VAKAGC-IHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFASDASTYTTG  255 (267)
T ss_dssp             HHHHHH-HHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTTCTTCCS
T ss_pred             HHHHHH-HHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhHhheeecCccccccC
Confidence            443211 1111111122  238999999999873321110    0111222333456689999999999987643  568


Q ss_pred             cEEEEecCC
Q 022625          279 LIFEVCEIS  287 (294)
Q Consensus       279 ~~~~v~~g~  287 (294)
                      +++++.+|-
T Consensus       256 ~~i~vdgG~  264 (267)
T 3gdg_A          256 ADLLIDGGY  264 (267)
T ss_dssp             CEEEESTTG
T ss_pred             CEEEECCce
Confidence            999998774

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.67  E-value=9.4e-16  Score=136.65  Aligned_cols=190  Identities=12%  Similarity=0.103  Sum_probs=130.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-------CCcEE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSI  167 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-------~~d~V  167 (294)
                      .++.+|+++||||+++||++++++|+++|++|++..|+.++..    .....+++|++|.++++++++       .+|++
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDil   82 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL----PEELFVEADLTTKEGCAIVAEATRQRLGGVDVI   82 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS----CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEE
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC----CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999999999999999999999999999999999765422    234468899999988776654       56999


Q ss_pred             EEcCC-------ch-------------------------HHhhhhhcCCCEEEEecccccccCCC-CchhccchhH--HH
Q 022625          168 ICPSE-------GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSG-GIQALMKGNA--RK  212 (294)
Q Consensus       168 i~~~~-------~~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~-~~~~~~~~~~--~~  212 (294)
                      ||+.+       .+                         +...+++.+-.+||++||..+..+.+ ....|..+|.  ..
T Consensus        83 VnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~  162 (261)
T 4h15_A           83 VHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALST  162 (261)
T ss_dssp             EECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHHHH
T ss_pred             EECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHHHH
Confidence            99722       11                         11235566778999999988765543 3344544332  22


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCC------------CCcc-----e-eeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPG------------GKQG-----F-QFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~------------~~~~-----~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      +.+.....+...||+++.|.||++.....            ....     . .........-+..++|||+++++++...
T Consensus       163 lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS~~  242 (261)
T 4h15_A          163 YSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDR  242 (261)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCch
Confidence            33444555667899999999998762110            0000     0 0001122234568999999999988654


Q ss_pred             C--CCCcEEEEecCCc
Q 022625          275 P--QTGLIFEVCEISN  288 (294)
Q Consensus       275 ~--~~g~~~~v~~g~~  288 (294)
                      .  ..|+.+.|.+|-.
T Consensus       243 a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          243 AASITGAEYTIDGGTV  258 (261)
T ss_dssp             GTTCCSCEEEESTTCS
T ss_pred             hcCccCcEEEECCcCc
Confidence            4  4799999988853

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.67  E-value=4.7e-16  Score=137.23  Aligned_cols=193  Identities=16%  Similarity=0.137  Sum_probs=134.7

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhh---hcCCCcEEeecCCCCHHHHHHHhc--CCcEEE
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME---SFGTYVESMAGDASNKKFLKTALR--GVRSII  168 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~---~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi  168 (294)
                      .++.+|+++||||+++||+++++.|+++|++|++..|+... ..+   ..+..+..+.+|++|++.++++++  ++|++|
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLV   84 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILV   84 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence            46789999999999999999999999999999999998642 111   234578899999999988877665  469999


Q ss_pred             EcCCc-----h-------------------------HHhhhhhcC-CCEEEEecccccccCCCCchhccchhH--HHHHH
Q 022625          169 CPSEG-----F-------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE  215 (294)
Q Consensus       169 ~~~~~-----~-------------------------~~~~~~~~g-v~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~  215 (294)
                      |+++.     +                         +...+.+.+ -.+||++||..+..+......|..+|.  ..+.+
T Consensus        85 NNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr  164 (247)
T 4hp8_A           85 NNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTK  164 (247)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHHH
Confidence            98321     0                         111233343 579999999988776666666755553  23444


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCC----CCcc--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPG----GKQG--FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~----~~~~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      .....+...||+++.|.||++.....    ....  ..+.......-+-.++|+|.++++++.+..  ..|+.+.|.+|-
T Consensus       165 ~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          165 LLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGGW  244 (247)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECccc
Confidence            55555667899999999999762211    0000  001111222334578999999999887654  478999998773

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.67  E-value=1.3e-15  Score=134.47  Aligned_cols=188  Identities=13%  Similarity=0.055  Sum_probs=122.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-----CCCcEEeecCCCCHHHHH----HHhcCCcEEEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLK----TALRGVRSIIC  169 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~v~~v~~D~~d~~~l~----~~l~~~d~Vi~  169 (294)
                      +|+++||||+|+||++++++|+++|++|++++|++++.....     +..+..+  |..+.+.+.    +.+..+|++||
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence            478999999999999999999999999999999887643321     2234433  666554332    23347899999


Q ss_pred             cCC---c---h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHHH
Q 022625          170 PSE---G---F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ  216 (294)
Q Consensus       170 ~~~---~---~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~  216 (294)
                      +++   .   +                         +...+++.+..+||++||..++.+......|..+|..  .+.+.
T Consensus        79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  158 (254)
T 1zmt_A           79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANA  158 (254)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHHHHH
Confidence            822   0   0                         1112345567899999999887665555566544432  12222


Q ss_pred             HHHHHHhCCCCEEEEEccceecCCCCCc----ce---------eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          217 DESMLMASGIPYTIIRTGVLQNTPGGKQ----GF---------QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       217 ae~~l~~~gl~~tivRPg~l~~~~~~~~----~~---------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                      ....+...|+++++|+||.+. ++....    ..         .+........+.+++|+|+++++++..+.  ..|+.+
T Consensus       159 la~e~~~~gi~v~~v~PG~v~-~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~  237 (254)
T 1zmt_A          159 LSKELGEYNIPVFAIGPNYLH-SEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVF  237 (254)
T ss_dssp             HHHHHGGGTCCEEEEEESSBC-CBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEE
T ss_pred             HHHHhhhcCcEEEEEecCccc-cccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccCCccCCEE
Confidence            333345579999999999984 111000    00         00011122346799999999999998654  478999


Q ss_pred             EEecCCcc
Q 022625          282 EVCEISNL  289 (294)
Q Consensus       282 ~v~~g~~~  289 (294)
                      .+.+|...
T Consensus       238 ~vdgG~~~  245 (254)
T 1zmt_A          238 WLAGGFPM  245 (254)
T ss_dssp             EESTTCCC
T ss_pred             EECCCchh
Confidence            99888543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.64  E-value=4.1e-15  Score=136.48  Aligned_cols=177  Identities=16%  Similarity=0.179  Sum_probs=117.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---c---------CCCcEEeecCCCCHHHHHHHhcC---
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F---------GTYVESMAGDASNKKFLKTALRG---  163 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~---------~~~v~~v~~D~~d~~~l~~~l~~---  163 (294)
                      +|+|+||||+|+||++++++|+++|++|+++.|+.++....   .         +..++++.+|++|.++++++++.   
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            58999999999999999999999999999988865442211   1         24688999999999999998875   


Q ss_pred             --CcEEEEcCC-----ch---------------------HH----hhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          164 --VRSIICPSE-----GF---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       164 --~d~Vi~~~~-----~~---------------------~~----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                        +|++||+++     .+                     +.    ..+++.+..+||++||..+..+......|..+|..
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK~a  161 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA  161 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHHHH
Confidence              799999832     00                     11    12445678899999999877655555556444431


Q ss_pred             --HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce----eeccCCC-----------------CCCCcCHHHHHHHHH
Q 022625          212 --KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF----QFEEGCA-----------------ANGSLSKEDAAFICV  268 (294)
Q Consensus       212 --~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~----~~~~g~~-----------------~~~~Is~eDvA~~iv  268 (294)
                        .+.+.....+...|+++++|+||.+..........    .+.....                 .....+++|+|++++
T Consensus       162 ~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~  241 (327)
T 1jtv_A          162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFL  241 (327)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Confidence              12222333344579999999999876322111000    0000000                 001258999999999


Q ss_pred             HHhhCCC
Q 022625          269 EALESIP  275 (294)
Q Consensus       269 ~aL~~~~  275 (294)
                      +++..+.
T Consensus       242 ~l~~~~~  248 (327)
T 1jtv_A          242 TALRAPK  248 (327)
T ss_dssp             HHHHCSS
T ss_pred             HHHcCCC
Confidence            9998743

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.64  E-value=6.5e-15  Score=142.20  Aligned_cols=176  Identities=17%  Similarity=0.219  Sum_probs=121.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCccch---h------hhcCCCcEEeecCCCCHHHHHHHhcCC--
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNA---M------ESFGTYVESMAGDASNKKFLKTALRGV--  164 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~-V~~~~R~~~~~---~------~~~~~~v~~v~~D~~d~~~l~~~l~~~--  164 (294)
                      .++++++||||+|+||++++++|+++|++ |+++.|+....   .      +..+..++++.+|++|.+++.++++.+  
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~  303 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD  303 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence            45789999999999999999999999995 99999987421   1      112346889999999999999998865  


Q ss_pred             ----cEEEEcCC----ch----------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHH
Q 022625          165 ----RSIICPSE----GF----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA  214 (294)
Q Consensus       165 ----d~Vi~~~~----~~----------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~  214 (294)
                          |+|||+.+    +.                      +.+++...+.++||++||..+.....+...|..++.  ..
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~~~Yaaaka--~l  381 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNA--YL  381 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHH--HH
T ss_pred             cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCCHHHHHHHH--HH
Confidence                99999832    10                      334456667899999999876555444455544332  22


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecC-CCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNT-PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~-~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      ......++..|+++++|+||.+.+. ..... ..-.........++.+|+++++..++..+.
T Consensus       382 ~~la~~~~~~gi~v~~i~pG~~~~~gm~~~~-~~~~~~~~g~~~i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          382 DGLAQQRRSDGLPATAVAWGTWAGSGMAEGP-VADRFRRHGVIEMPPETACRALQNALDRAE  442 (486)
T ss_dssp             HHHHHHHHHTTCCCEEEEECCBC-------------CTTTTEECBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhcCCeEEEEECCeeCCCcccchh-HHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            2223345668999999999987632 11111 000011223457899999999999998754

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.62  E-value=5.7e-16  Score=135.99  Aligned_cols=187  Identities=11%  Similarity=0.004  Sum_probs=119.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-E--cCccchhhhcC--CCcEEeecCCCCHHHH-HHH---hcCCcEEEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-V--KDKRNAMESFG--TYVESMAGDASNKKFL-KTA---LRGVRSIIC  169 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~-~--R~~~~~~~~~~--~~v~~v~~D~~d~~~l-~~~---l~~~d~Vi~  169 (294)
                      +|+++||||+|+||++++++|+++|++|+++ .  |+++++.+...  .+.++.  |..+.+.+ +++   +..+|++||
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~g~iD~lv~   78 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIAL--AEQKPERLVDATLQHGEAIDTIVS   78 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEEC--CCCCGGGHHHHHGGGSSCEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCccc--CHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4899999999999999999999999999999 5  98776543211  122322  44443333 222   236799999


Q ss_pred             cCC-------c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHH
Q 022625          170 PSE-------G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA  214 (294)
Q Consensus       170 ~~~-------~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~  214 (294)
                      +++       + +                         +...+++.+..+||++||..+..+......|..+|..  .+.
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~  158 (244)
T 1zmo_A           79 NDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALV  158 (244)
T ss_dssp             CCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHHHHHH
Confidence            821       1 1                         1112345567899999999887665555556544432  122


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCCC---CCc---c--eeecc-CCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTPG---GKQ---G--FQFEE-GCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~~---~~~---~--~~~~~-g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                      +.....+...|+++++|+||++.....   ...   .  ..+.. ......+.+++|+|+++++++....  ..|+.+.+
T Consensus       159 ~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~v  238 (244)
T 1zmo_A          159 ESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAF  238 (244)
T ss_dssp             HHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEE
T ss_pred             HHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEe
Confidence            223333455799999999998763321   100   0  00000 1122346799999999999998654  46899999


Q ss_pred             ecCC
Q 022625          284 CEIS  287 (294)
Q Consensus       284 ~~g~  287 (294)
                      .+|.
T Consensus       239 dgG~  242 (244)
T 1zmo_A          239 TGGY  242 (244)
T ss_dssp             STTC
T ss_pred             CCCC
Confidence            8774

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.61  E-value=7e-15  Score=130.82  Aligned_cols=190  Identities=9%  Similarity=0.015  Sum_probs=123.6

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEEcCccch-hh---hcCCCcEEeecCCCCHHHHHHHhc--------
Q 022625           97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKRNA-ME---SFGTYVESMAGDASNKKFLKTALR--------  162 (294)
Q Consensus        97 ~~~~~vlVtGa--tG~IG~~l~~~L~~~g~~V~~~~R~~~~~-~~---~~~~~v~~v~~D~~d~~~l~~~l~--------  162 (294)
                      +.+|+++||||  +|+||++++++|+++|++|+++.|+.++. .+   ..+..+.++.+|++|.++++++++        
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            46799999999  99999999999999999999999987652 22   223467889999999998887775        


Q ss_pred             --CCcEEEEcCC---------c-h---------------------HHhhhhhc--CCCEEEEecccccccCCCCchhccc
Q 022625          163 --GVRSIICPSE---------G-F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMK  207 (294)
Q Consensus       163 --~~d~Vi~~~~---------~-~---------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~~  207 (294)
                        .+|++||+++         + +                     +.+++...  .-.+||++||.... +......|..
T Consensus        85 ~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~Y~a  163 (269)
T 2h7i_A           85 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR-AMPAYNWMTV  163 (269)
T ss_dssp             TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS-CCTTTHHHHH
T ss_pred             CCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc-ccCchHHHHH
Confidence              7899999821         1 1                     11111111  12589999987652 2233334433


Q ss_pred             hhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCC-------Ccc---------eeeccCCCCC-CCcCHHHHHHHHH
Q 022625          208 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGG-------KQG---------FQFEEGCAAN-GSLSKEDAAFICV  268 (294)
Q Consensus       208 ~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~-------~~~---------~~~~~g~~~~-~~Is~eDvA~~iv  268 (294)
                      +|..  .+.+.....+...|+++++|+||++......       ...         ..+....... .+.+++|+|++++
T Consensus       164 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~  243 (269)
T 2h7i_A          164 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVC  243 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHHH
Confidence            3321  1222223334457999999999987521100       000         0000111112 3568899999999


Q ss_pred             HHhhCCC--CCCcEEEEecCC
Q 022625          269 EALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       269 ~aL~~~~--~~g~~~~v~~g~  287 (294)
                      +++....  ..|+.+.+.+|-
T Consensus       244 ~L~s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          244 ALLSDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             HHHSSSCTTCCSEEEEESTTG
T ss_pred             HHhCchhccCcceEEEecCCe
Confidence            9997644  468899987773

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.60  E-value=1.2e-14  Score=130.74  Aligned_cols=76  Identities=14%  Similarity=0.134  Sum_probs=61.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCH-HHHHHHhc-----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNK-KFLKTALR-----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~-~~l~~~l~-----  162 (294)
                      ...+|+|+||||+|+||++++++|+++|++|++++|+.++..+.       .+..++++.+|++|. ++++++++     
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            44689999999999999999999999999999999998764332       124689999999997 77666554     


Q ss_pred             --CCcEEEEcC
Q 022625          163 --GVRSIICPS  171 (294)
Q Consensus       163 --~~d~Vi~~~  171 (294)
                        .+|++||++
T Consensus        89 ~g~iD~lv~nA   99 (311)
T 3o26_A           89 FGKLDILVNNA   99 (311)
T ss_dssp             HSSCCEEEECC
T ss_pred             CCCCCEEEECC
Confidence              789999983

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.60  E-value=1.4e-14  Score=138.74  Aligned_cols=193  Identities=15%  Similarity=0.108  Sum_probs=128.3

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc--hhhhc-CCCcEEeecCCCCHHHHHHHhc-------C-
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESF-GTYVESMAGDASNKKFLKTALR-------G-  163 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~-~~~v~~v~~D~~d~~~l~~~l~-------~-  163 (294)
                      ....+++++||||+|+||++++++|+++|++|+++.|+...  ..+.. ..+++++.+|++|.++++++++       + 
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~  288 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGK  288 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTC
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCC
Confidence            34578999999999999999999999999999999987532  11111 1256789999999988877664       3 


Q ss_pred             CcEEEEcCC----ch----------------------HHhhh----hhcCCCEEEEecccccccCCCCchhccchhHH--
Q 022625          164 VRSIICPSE----GF----------------------ISNAG----SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--  211 (294)
Q Consensus       164 ~d~Vi~~~~----~~----------------------~~~~~----~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--  211 (294)
                      +|+|||+++    +.                      +.+++    .+.+..+||++||..+..+..+...|..+|..  
T Consensus       289 id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~  368 (454)
T 3u0b_A          289 VDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMI  368 (454)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             ceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHH
Confidence            899999822    10                      11222    22366799999999877666666666554431  


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                      .+.+.....+...|++++.|+||++..........    ............+++|+|+++++++....  ..|+++++.+
T Consensus       369 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdG  448 (454)
T 3u0b_A          369 GLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCG  448 (454)
T ss_dssp             HHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECC
Confidence            12233334445689999999999986322111000    00001112234589999999999887543  5789999987


Q ss_pred             CC
Q 022625          286 IS  287 (294)
Q Consensus       286 g~  287 (294)
                      |.
T Consensus       449 G~  450 (454)
T 3u0b_A          449 QA  450 (454)
T ss_dssp             SB
T ss_pred             cc
Confidence            64

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.60  E-value=1.3e-14  Score=140.79  Aligned_cols=177  Identities=17%  Similarity=0.169  Sum_probs=121.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccch---hh----h--cCCCcEEeecCCCCHHHHHHHhcC--C
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNA---ME----S--FGTYVESMAGDASNKKFLKTALRG--V  164 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~---~~----~--~~~~v~~v~~D~~d~~~l~~~l~~--~  164 (294)
                      .++++|+||||+|+||.+++++|+++|+ +|+++.|+....   .+    .  .+..++++.+|++|.+++.+++++  +
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~l  336 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPP  336 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCC
Confidence            3578999999999999999999999999 588899986421   11    1  234688899999999999999875  8


Q ss_pred             cEEEEcCC----ch----------------------HHhhhhhc-CCCEEEEecccccccCCCCchhccchhHHHHHHHH
Q 022625          165 RSIICPSE----GF----------------------ISNAGSLK-GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQD  217 (294)
Q Consensus       165 d~Vi~~~~----~~----------------------~~~~~~~~-gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~a  217 (294)
                      |+|||+.+    +.                      +.+++... +.++||++||..+.....+...|..+|.  .....
T Consensus       337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~~~YaaaKa--~ld~l  414 (511)
T 2z5l_A          337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQGAYAAANA--ALDAL  414 (511)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTBHHHHHHHH--HHHHH
T ss_pred             cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCCHHHHHHHH--HHHHH
Confidence            99999832    10                      22233444 6789999999876555555555544333  22222


Q ss_pred             HHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          218 ESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       218 e~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      ...++..|+++++|+||.+.+...................++.+|+++++..++..+.
T Consensus       415 a~~~~~~gi~v~sv~pG~~~~tgm~~~~~~~~~~~~g~~~l~~e~~a~~l~~al~~~~  472 (511)
T 2z5l_A          415 AERRRAAGLPATSVAWGLWGGGGMAAGAGEESLSRRGLRAMDPDAAVDALLGAMGRND  472 (511)
T ss_dssp             HHHHHTTTCCCEEEEECCBCSTTCCCCHHHHHHHHHTBCCBCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHcCCcEEEEECCcccCCcccccccHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            2334668999999999988422111110000001123457899999999999997643

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.59  E-value=3.3e-15  Score=136.70  Aligned_cols=185  Identities=12%  Similarity=0.016  Sum_probs=118.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEc---------Cccchhhhc---CCCcEEeecCCCCHHHHHHHh--
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---------DKRNAMESF---GTYVESMAGDASNKKFLKTAL--  161 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R---------~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~l--  161 (294)
                      .+.+|+++||||+|+||++++++|+++|++|++..|         +.+++.+..   ...-..+.+|++|.+++++++  
T Consensus         6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~   85 (319)
T 1gz6_A            6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT   85 (319)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHH
Confidence            456899999999999999999999999999999754         444432211   101112357998886655543  


Q ss_pred             -----cCCcEEEEcCC----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhcc
Q 022625          162 -----RGVRSIICPSE----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALM  206 (294)
Q Consensus       162 -----~~~d~Vi~~~~----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~  206 (294)
                           ..+|++||+++    + +                         +...+++.+..|||++||.....+..+...|.
T Consensus        86 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~Y~  165 (319)
T 1gz6_A           86 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYS  165 (319)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHHHH
Confidence                 36799999832    1 1                         11123456778999999986654444445564


Q ss_pred             chhHHH--HHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcEEEE
Q 022625          207 KGNARK--LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEV  283 (294)
Q Consensus       207 ~~~~~~--~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~~~v  283 (294)
                      .+|...  +.+.....+...|+++++|+||.+. .... . . .  .......++++|+|.++++++..+. ..|++|++
T Consensus       166 aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~t-~~~~-~-~-~--~~~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v  239 (319)
T 1gz6_A          166 AAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGS-RMTE-T-V-M--PEDLVEALKPEYVAPLVLWLCHESCEENGGLFEV  239 (319)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCS-TTTG-G-G-S--CHHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEE
T ss_pred             HHHHHHHHHHHHHHHHhcccCEEEEEEeCCCcc-cccc-c-c-C--ChhhhccCCHHHHHHHHHHHhCchhhcCCCEEEE
Confidence            444321  1222223334579999999999873 2111 1 0 0  0111234689999999999887654 46899998


Q ss_pred             ecC
Q 022625          284 CEI  286 (294)
Q Consensus       284 ~~g  286 (294)
                      .+|
T Consensus       240 ~GG  242 (319)
T 1gz6_A          240 GAG  242 (319)
T ss_dssp             ETT
T ss_pred             CCC
Confidence            776

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.59  E-value=2.8e-15  Score=132.50  Aligned_cols=186  Identities=12%  Similarity=0.063  Sum_probs=119.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEEcCccchhhhc--------CCCcEEeecCCCCHHHHHHHhc---
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR---  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~---~g~~V~~~~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~l~---  162 (294)
                      +.+|+++||||+|+||++++++|++   +|++|++++|+++++.+..        +..+.++.+|++|.++++++++   
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999   8999999999986644321        3458889999999988877653   


Q ss_pred             ------CCc--EEEEcCC------c-----h------------------HHhh----hhhc--CCCEEEEecccccccCC
Q 022625          163 ------GVR--SIICPSE------G-----F------------------ISNA----GSLK--GVQHVILLSQLSVYRGS  199 (294)
Q Consensus       163 ------~~d--~Vi~~~~------~-----~------------------~~~~----~~~~--gv~r~V~vSs~~~~~~~  199 (294)
                            .+|  ++||+++      .     .                  +.++    +++.  +..+||++||..++.+.
T Consensus        84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY  163 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC
T ss_pred             hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCC
Confidence                  357  9999721      1     1                  0111    2223  45689999999887766


Q ss_pred             CCchhccchhHHHHHHHHHHHHHh-CCCCEEEEEccceecCCCCC-------cc--eeeccCCCCCCCcCHHHHHHHHHH
Q 022625          200 GGIQALMKGNARKLAEQDESMLMA-SGIPYTIIRTGVLQNTPGGK-------QG--FQFEEGCAANGSLSKEDAAFICVE  269 (294)
Q Consensus       200 ~~~~~~~~~~~~~~~~~ae~~l~~-~gl~~tivRPg~l~~~~~~~-------~~--~~~~~g~~~~~~Is~eDvA~~iv~  269 (294)
                      .....|..+|..- ....+.+..+ .+++++.|+||.+.......       ..  ..+........+.+++|+|+++++
T Consensus       164 ~~~~~Y~asKaa~-~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~  242 (259)
T 1oaa_A          164 KGWGLYCAGKAAR-DMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLG  242 (259)
T ss_dssp             TTCHHHHHHHHHH-HHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHH
T ss_pred             CCccHHHHHHHHH-HHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHHH
Confidence            5555664444311 0111121122 24999999999875211000       00  000000112346799999999999


Q ss_pred             HhhCCC-CCCcEEEE
Q 022625          270 ALESIP-QTGLIFEV  283 (294)
Q Consensus       270 aL~~~~-~~g~~~~v  283 (294)
                      ++.... ..|+.+.+
T Consensus       243 l~~~~~~itG~~i~v  257 (259)
T 1oaa_A          243 LLQKDTFQSGAHVDF  257 (259)
T ss_dssp             HHHHCCSCTTEEEET
T ss_pred             HHhhccccCCcEEec
Confidence            997533 35666654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.47  E-value=1e-13  Score=137.38  Aligned_cols=189  Identities=11%  Similarity=-0.033  Sum_probs=117.8

Q ss_pred             CCCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEc---------Cccchhhh---cCCCcEEeecCCCCHHHHHHH
Q 022625           93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---------DKRNAMES---FGTYVESMAGDASNKKFLKTA  160 (294)
Q Consensus        93 ~~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R---------~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~  160 (294)
                      ....+.+|+++||||+++||++++++|+++|++|++++|         +.+.+...   ....-..+.+|++|.++++++
T Consensus        13 ~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~   92 (613)
T 3oml_A           13 GKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKV   92 (613)
T ss_dssp             --CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHH
Confidence            345677899999999999999999999999999999987         33333221   111112234799988777776


Q ss_pred             hc-------CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCch
Q 022625          161 LR-------GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQ  203 (294)
Q Consensus       161 l~-------~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~  203 (294)
                      ++       .+|++||+++-     +                         +...+++.+..+||++||..+..+.....
T Consensus        93 ~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~  172 (613)
T 3oml_A           93 IETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQV  172 (613)
T ss_dssp             HC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCH
T ss_pred             HHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCCh
Confidence            65       46999998321     0                         11224556678999999988766655555


Q ss_pred             hccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcE
Q 022625          204 ALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLI  280 (294)
Q Consensus       204 ~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~  280 (294)
                      .|..+|..  .+.+.....+...|+.++.|.||.+........      .......++++|+|.++++++.... ..|++
T Consensus       173 ~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~~~~------~~~~~~~~~pedvA~~v~~L~s~~~~~tG~~  246 (613)
T 3oml_A          173 NYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEGIL------PDILFNELKPKLIAPVVAYLCHESCEDNGSY  246 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------CCCC------CHHHHTTCCGGGTHHHHHHTTSTTCCCCSCE
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhhhcc------chhhhhcCCHHHHHHHHHHhcCCCcCCCceE
Confidence            66554431  122333333455799999999997542111100      1111334689999999999887654 46899


Q ss_pred             EEEecCC
Q 022625          281 FEVCEIS  287 (294)
Q Consensus       281 ~~v~~g~  287 (294)
                      +++.+|-
T Consensus       247 i~vdGG~  253 (613)
T 3oml_A          247 IESAAGW  253 (613)
T ss_dssp             EEEETTE
T ss_pred             EEECCCe
Confidence            9998874

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.46  E-value=7.2e-13  Score=128.02  Aligned_cols=176  Identities=18%  Similarity=0.162  Sum_probs=120.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc---hhh------hcCCCcEEeecCCCCHHHHHHHhcC----
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---AME------SFGTYVESMAGDASNKKFLKTALRG----  163 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~---~~~------~~~~~v~~v~~D~~d~~~l~~~l~~----  163 (294)
                      .++++|||||+|+||.+++++|+++|+ .|+++.|+...   ..+      ..+..+.++.+|++|.+++.++++.    
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            358999999999999999999999998 78888886432   111      1245788999999999999998864    


Q ss_pred             --CcEEEEcCC-----ch----------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHH
Q 022625          164 --VRSIICPSE-----GF----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA  214 (294)
Q Consensus       164 --~d~Vi~~~~-----~~----------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~  214 (294)
                        +|+|||+.+     +.                      +.+++...+..+||++||..+..+..+...|..+|.  ..
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaAaKa--~l  395 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQPGYAAANA--YL  395 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTCHHHHHHHH--HH
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCcHHHHHHHH--HH
Confidence              599999822     00                      233455567789999999887666555556644443  22


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCC-CCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTP-GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~-~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      ......++..|++++.|.||.+.+.. .......-.........++.++.+.++.+++..+.
T Consensus       396 dala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~g~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          396 DALAEHRRSLGLTASSVAWGTWGEVGMATDPEVHDRLVRQGVLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHTTCCCEEEEECEESSSCC------CHHHHHTTEEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCeEEEEECCcccCCccccChHHHHHHHhcCCCCCCHHHHHHHHHHHHcCCC
Confidence            22233456789999999999875321 11110000001122345799999999999997654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.44  E-value=4.2e-13  Score=130.67  Aligned_cols=177  Identities=14%  Similarity=0.072  Sum_probs=115.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEE-EcCc-------------cchhh------hcCCCcEEeecCCCCHH
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKAL-VKDK-------------RNAME------SFGTYVESMAGDASNKK  155 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~-V~~~-~R~~-------------~~~~~------~~~~~v~~v~~D~~d~~  155 (294)
                      .+++++|||||+|+||.+++++|+++|++ |+++ .|+.             +.+.+      ..+..+.++.+|++|.+
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            46789999999999999999999999998 5555 6774             21111      12346889999999999


Q ss_pred             HHHHHhcC------CcEEEEcCC----ch----------------------HHhhhh----hcC-CCEEEEecccccccC
Q 022625          156 FLKTALRG------VRSIICPSE----GF----------------------ISNAGS----LKG-VQHVILLSQLSVYRG  198 (294)
Q Consensus       156 ~l~~~l~~------~d~Vi~~~~----~~----------------------~~~~~~----~~g-v~r~V~vSs~~~~~~  198 (294)
                      ++.++++.      +|+|||+++    +.                      +.+++.    +.+ ..+||++||..+..+
T Consensus       329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g  408 (525)
T 3qp9_A          329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG  408 (525)
T ss_dssp             HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred             HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence            99998875      499999832    10                      112222    222 789999999988766


Q ss_pred             CCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          199 SGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      ..+...|..+|..  .......++..|++++.|.||.+..+........-.........++.+++++++.++|..+.
T Consensus       409 ~~g~~~YaaaKa~--l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~~~~~~~~~~~g~~~l~pee~a~~l~~~l~~~~  483 (525)
T 3qp9_A          409 GAGQGAYAAGTAF--LDALAGQHRADGPTVTSVAWSPWEGSRVTEGATGERLRRLGLRPLAPATALTALDTALGHGD  483 (525)
T ss_dssp             CTTCHHHHHHHHH--HHHHHTSCCSSCCEEEEEEECCBTTSGGGSSHHHHHHHHTTBCCBCHHHHHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHH--HHHHHHHHHhCCCCEEEEECCccccccccchhhHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            5555556443321  11111222347899999999998322211110000011123456899999999999997653

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.41  E-value=4.1e-12  Score=114.34  Aligned_cols=193  Identities=12%  Similarity=0.018  Sum_probs=112.9

Q ss_pred             cCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEEcCc-----------cchhhh--cCCC-----cEEeecC-----
Q 022625           96 EEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDK-----------RNAMES--FGTY-----VESMAGD-----  150 (294)
Q Consensus        96 ~~~~~~vlVtGat--G~IG~~l~~~L~~~g~~V~~~~R~~-----------~~~~~~--~~~~-----v~~v~~D-----  150 (294)
                      .+.+|+++||||+  ++||++++++|+++|++|++++|++           +++.+.  ...+     ...+.+|     
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence            3568999999999  9999999999999999999998642           111111  1000     1222332     


Q ss_pred             ---CC----C--------HHHHHHH-------hcCCcEEEEcCC------c-h---------------------HHhhhh
Q 022625          151 ---AS----N--------KKFLKTA-------LRGVRSIICPSE------G-F---------------------ISNAGS  180 (294)
Q Consensus       151 ---~~----d--------~~~l~~~-------l~~~d~Vi~~~~------~-~---------------------~~~~~~  180 (294)
                         +.    |        .++++++       +..+|++||+++      + +                     +.+++.
T Consensus        85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  164 (297)
T 1d7o_A           85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence               22    1        2233333       336799999832      1 1                     111121


Q ss_pred             hc--CCCEEEEecccccccCCCCc-hhccchhHH--HHHHHHHHHHH-hCCCCEEEEEccceecCCCCCcce--e----e
Q 022625          181 LK--GVQHVILLSQLSVYRGSGGI-QALMKGNAR--KLAEQDESMLM-ASGIPYTIIRTGVLQNTPGGKQGF--Q----F  248 (294)
Q Consensus       181 ~~--gv~r~V~vSs~~~~~~~~~~-~~~~~~~~~--~~~~~ae~~l~-~~gl~~tivRPg~l~~~~~~~~~~--~----~  248 (294)
                      ..  .-.+||++||..+..+.... ..|..+|..  .+.+.....+. ..|+++++|+||.+..........  .    +
T Consensus       165 ~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~  244 (297)
T 1d7o_A          165 PIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYS  244 (297)
T ss_dssp             GGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHH
T ss_pred             HHhccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHHHHh
Confidence            11  12689999998776554443 355444431  12222223333 369999999999987322111000  0    0


Q ss_pred             ccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          249 EEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       249 ~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      ........+.+++|+|+++++++....  ..|+.+++.+|-.
T Consensus       245 ~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~  286 (297)
T 1d7o_A          245 YNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             HHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             hccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCce
Confidence            011122345789999999999887533  4689999988743

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.40  E-value=3.1e-13  Score=123.86  Aligned_cols=188  Identities=14%  Similarity=0.070  Sum_probs=117.9

Q ss_pred             CCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCc---------cchhh---hc---C---CCcEEeecCCCCH--H-
Q 022625           99 RDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK---------RNAME---SF---G---TYVESMAGDASNK--K-  155 (294)
Q Consensus        99 ~~~vlVtGatG--~IG~~l~~~L~~~g~~V~~~~R~~---------~~~~~---~~---~---~~v~~v~~D~~d~--~-  155 (294)
                      +|+++||||++  +||++++++|+++|++|++.+|++         ++...   ..   .   ..+.++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            68999999975  999999999999999999777554         21111   10   1   2367788888766  5 


Q ss_pred             -----------------HHHHHh-------cCCcEEEEcCC------c-h---------------------HH----hhh
Q 022625          156 -----------------FLKTAL-------RGVRSIICPSE------G-F---------------------IS----NAG  179 (294)
Q Consensus       156 -----------------~l~~~l-------~~~d~Vi~~~~------~-~---------------------~~----~~~  179 (294)
                                       ++++++       ..+|++||+++      + +                     +.    ..+
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             554443       35799999832      0 0                     11    112


Q ss_pred             hhcCCCEEEEecccccccCCCCch-hccchhHH--HHHHHHHHHHHh-CCCCEEEEEccceecCCCCCc-----------
Q 022625          180 SLKGVQHVILLSQLSVYRGSGGIQ-ALMKGNAR--KLAEQDESMLMA-SGIPYTIIRTGVLQNTPGGKQ-----------  244 (294)
Q Consensus       180 ~~~gv~r~V~vSs~~~~~~~~~~~-~~~~~~~~--~~~~~ae~~l~~-~gl~~tivRPg~l~~~~~~~~-----------  244 (294)
                      ++.  .+||++||..+..+..... .|..+|..  .+.+.....+.. .|++++.|.||++........           
T Consensus       162 ~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  239 (329)
T 3lt0_A          162 KPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNT  239 (329)
T ss_dssp             EEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC----------
T ss_pred             hhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccccc
Confidence            222  6899999988776655553 56544431  223333344555 799999999998652110000           


Q ss_pred             ------------------ce--------------------eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          245 ------------------GF--------------------QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       245 ------------------~~--------------------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                                        ..                    .+........+.+++|+|+++++++....  ..|+.+.+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~vd  319 (329)
T 3lt0_A          240 NQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVD  319 (329)
T ss_dssp             --------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             cccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEEEc
Confidence                              00                    00001122335689999999999986543  578999998


Q ss_pred             cCCc
Q 022625          285 EISN  288 (294)
Q Consensus       285 ~g~~  288 (294)
                      +|-.
T Consensus       320 GG~~  323 (329)
T 3lt0_A          320 NGLN  323 (329)
T ss_dssp             TTGG
T ss_pred             CCee
Confidence            7753

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.35  E-value=6.4e-12  Score=114.36  Aligned_cols=190  Identities=12%  Similarity=0.054  Sum_probs=100.4

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEEcCc-----------cchhhh--------------cC-C-----C
Q 022625           97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDK-----------RNAMES--------------FG-T-----Y  143 (294)
Q Consensus        97 ~~~~~vlVtGa--tG~IG~~l~~~L~~~g~~V~~~~R~~-----------~~~~~~--------------~~-~-----~  143 (294)
                      +.+|+++||||  +++||++++++|+++|++|+++.|++           +++.+.              .. .     .
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVF   86 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CC
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccc
Confidence            46799999999  89999999999999999999998642           111100              00 0     0


Q ss_pred             cEEeecCC------------CC--------HHHHHHH-------hcCCcEEEEcCC------c-h---------------
Q 022625          144 VESMAGDA------------SN--------KKFLKTA-------LRGVRSIICPSE------G-F---------------  174 (294)
Q Consensus       144 v~~v~~D~------------~d--------~~~l~~~-------l~~~d~Vi~~~~------~-~---------------  174 (294)
                      .+++.+|+            +|        .++++++       +..+|++||+++      + +               
T Consensus        87 ~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN  166 (319)
T 2ptg_A           87 DKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSS  166 (319)
T ss_dssp             SEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHH
T ss_pred             cccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHh
Confidence            24444442            22        1133333       336799999721      1 1               


Q ss_pred             ------HHhhhhh---cCCCEEEEecccccccCCCCc-hhccchhH--HHHHHHHHHHHHh-CCCCEEEEEccceecCCC
Q 022625          175 ------ISNAGSL---KGVQHVILLSQLSVYRGSGGI-QALMKGNA--RKLAEQDESMLMA-SGIPYTIIRTGVLQNTPG  241 (294)
Q Consensus       175 ------~~~~~~~---~gv~r~V~vSs~~~~~~~~~~-~~~~~~~~--~~~~~~ae~~l~~-~gl~~tivRPg~l~~~~~  241 (294)
                            +..++..   .+ .+||++||..+..+.... ..|..+|.  ..+.+.....+.. .|+++++|+||++.....
T Consensus       167 ~~g~~~l~~~~~~~m~~~-g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~  245 (319)
T 2ptg_A          167 SYSFVSLLQHFLPLMKEG-GSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAA  245 (319)
T ss_dssp             THHHHHHHHHHGGGEEEE-EEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC----
T ss_pred             hHHHHHHHHHHHHHHhcC-ceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhh
Confidence                  1111111   12 699999998776544433 35544443  1223333333443 799999999998763211


Q ss_pred             CCcc----ee--------eccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          242 GKQG----FQ--------FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       242 ~~~~----~~--------~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      ....    ..        +........+.+++|+|+++++++....  ..|+.+.+.+|-
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  305 (319)
T 2ptg_A          246 SAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGL  305 (319)
T ss_dssp             ---------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             hhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence            1000    00        0001111235689999999999887533  578999998774

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.33  E-value=1.2e-11  Score=122.26  Aligned_cols=186  Identities=13%  Similarity=0.019  Sum_probs=121.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc-cchhhh---cCCCcEEeecCC-CCHHHH-H---HHhcCCcE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES---FGTYVESMAGDA-SNKKFL-K---TALRGVRS  166 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~-~~~~~~---~~~~v~~v~~D~-~d~~~l-~---~~l~~~d~  166 (294)
                      .+.+|+++||||+++||++++++|+++|++|++..|.. +...+.   .+..+..+.+|+ ++.+.+ +   +.+..+|+
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDi  398 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDI  398 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCE
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCE
Confidence            56789999999999999999999999999999987532 222111   123456677888 555443 2   23446899


Q ss_pred             EEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHHH
Q 022625          167 IICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA  214 (294)
Q Consensus       167 Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~  214 (294)
                      +||+++-     +                         +...+++.+-.+||++||..+..+......|..+|.  ..+.
T Consensus       399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt  478 (604)
T 2et6_A          399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLS  478 (604)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHHHHH
Confidence            9998320     0                         112244555679999999877665555556655543  2233


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcEEEEecCC
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVCEIS  287 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~~~v~~g~  287 (294)
                      +.....+...|++++.|.||. . .+-....  +  .........++|+|.++++++.... ..|+++.+.+|-
T Consensus       479 ~~la~El~~~gIrVn~v~PG~-~-T~m~~~~--~--~~~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdGG~  546 (604)
T 2et6_A          479 KTMAIEGAKNNIKVNIVAPHA-E-TAMTLSI--M--REQDKNLYHADQVAPLLVYLGTDDVPVTGETFEIGGGW  546 (604)
T ss_dssp             HHHHHHHGGGTEEEEEEEECC-C-CCC-------------CCSSCGGGTHHHHHHTTSTTCCCCSCEEEEETTE
T ss_pred             HHHHHHhCccCeEEEEEcCCC-C-Ccccccc--C--chhhccCCCHHHHHHHHHHHhCCccCCCCcEEEECCCe
Confidence            444445566899999999994 2 2211110  1  1111234689999999999886544 578999998874

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.33  E-value=7.8e-12  Score=113.66  Aligned_cols=190  Identities=14%  Similarity=0.106  Sum_probs=111.7

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEEcCc-----------cchhh--hcCC-----CcEEeecCC-----
Q 022625           97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDK-----------RNAME--SFGT-----YVESMAGDA-----  151 (294)
Q Consensus        97 ~~~~~vlVtGa--tG~IG~~l~~~L~~~g~~V~~~~R~~-----------~~~~~--~~~~-----~v~~v~~D~-----  151 (294)
                      +.+|+++||||  +++||++++++|+++|++|+++.|++           +++.+  ....     ..+++.+|+     
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~   86 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKP   86 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSST
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccccc
Confidence            56899999999  89999999999999999999998753           11111  0100     023444332     


Q ss_pred             -------CC--------HHHHHHH-------hcCCcEEEEcCC------c-h---------------------HHhhhhh
Q 022625          152 -------SN--------KKFLKTA-------LRGVRSIICPSE------G-F---------------------ISNAGSL  181 (294)
Q Consensus       152 -------~d--------~~~l~~~-------l~~~d~Vi~~~~------~-~---------------------~~~~~~~  181 (294)
                             +|        .++++++       +..+|++||+++      + +                     +.+++..
T Consensus        87 ~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  166 (315)
T 2o2s_A           87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGP  166 (315)
T ss_dssp             TSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHST
T ss_pred             chhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence                   22        2233333       336799999832      1 1                     1111111


Q ss_pred             ---cCCCEEEEecccccccCCCCc-hhccchhHH--HHHHHHHHHHH-hCCCCEEEEEccceecCC----CC-Cc-ce--
Q 022625          182 ---KGVQHVILLSQLSVYRGSGGI-QALMKGNAR--KLAEQDESMLM-ASGIPYTIIRTGVLQNTP----GG-KQ-GF--  246 (294)
Q Consensus       182 ---~gv~r~V~vSs~~~~~~~~~~-~~~~~~~~~--~~~~~ae~~l~-~~gl~~tivRPg~l~~~~----~~-~~-~~--  246 (294)
                         .+ .+||++||..+..+.... ..|..+|..  .+.+.....+. ..|++++.|+||++....    .. .. ..  
T Consensus       167 ~m~~~-g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~  245 (315)
T 2o2s_A          167 IMNEG-GSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFID  245 (315)
T ss_dssp             TEEEE-EEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHH
T ss_pred             HHhcC-CEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchhHH
Confidence               12 689999998876554433 245444431  12232333344 379999999999875211    00 00 00  


Q ss_pred             e----eccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          247 Q----FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       247 ~----~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      .    +..........+++|+|+++++++....  ..|+.+.+.+|-
T Consensus       246 ~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          246 YAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL  292 (315)
T ss_dssp             HHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence            0    0001122345689999999999887533  468999988774

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.28  E-value=2.2e-11  Score=93.76  Aligned_cols=93  Identities=22%  Similarity=0.167  Sum_probs=78.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc---
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG---  173 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~---  173 (294)
                      .+++|+|+|+ |++|+.+++.|.++| ++|+++.|++++.......++.++.+|+.+.+.+.+.++++|+||++.+.   
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~   82 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT   82 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence            4679999999 999999999999999 99999999998876655567889999999999999999999999999542   


Q ss_pred             -hHHhhhhhcCCCEEEEec
Q 022625          174 -FISNAGSLKGVQHVILLS  191 (294)
Q Consensus       174 -~~~~~~~~~gv~r~V~vS  191 (294)
                       .+.+.+.+.|+++|.+.+
T Consensus        83 ~~~~~~~~~~g~~~~~~~~  101 (118)
T 3ic5_A           83 PIIAKAAKAAGAHYFDLTE  101 (118)
T ss_dssp             HHHHHHHHHTTCEEECCCS
T ss_pred             HHHHHHHHHhCCCEEEecC
Confidence             255667788887665443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.23  E-value=1.1e-10  Score=115.40  Aligned_cols=185  Identities=13%  Similarity=0.017  Sum_probs=115.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc---------cchhhh---c---CCCcEEeecCCCCHHHH-H--
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---------RNAMES---F---GTYVESMAGDASNKKFL-K--  158 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~---------~~~~~~---~---~~~v~~v~~D~~d~~~l-~--  158 (294)
                      +.+|+++||||+++||++++++|+++|++|++..|+.         +.+.+.   .   +.....-..|+.+.+.+ +  
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~   85 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETA   85 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHH
Confidence            5689999999999999999999999999999987754         322211   1   11222223344443332 2  


Q ss_pred             -HHhcCCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccc
Q 022625          159 -TALRGVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK  207 (294)
Q Consensus       159 -~~l~~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~  207 (294)
                       +.+..+|++||+++-     +                         +...+++.+-.+||++||..+..+......|..
T Consensus        86 ~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~a  165 (604)
T 2et6_A           86 VKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYAS  165 (604)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHHHH
Confidence             234468999998321     0                         122345556679999999877655555556655


Q ss_pred             hhH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcEEEEe
Q 022625          208 GNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEVC  284 (294)
Q Consensus       208 ~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~~~v~  284 (294)
                      +|.  ..+.+.....+...||+++.|.|+...+.....  .    .........++|+|.++++++.... ..|+++.+.
T Consensus       166 sKaal~~lt~~la~El~~~gIrVn~v~Pg~~T~m~~~~--~----~~~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vd  239 (604)
T 2et6_A          166 AKSALLGFAETLAKEGAKYNIKANAIAPLARSRMTESI--M----PPPMLEKLGPEKVAPLVLYLSSAENELTGQFFEVA  239 (604)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCHHHHTT--S----CHHHHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEE
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEccCCcCcccccc--C----ChhhhccCCHHHHHHHHHHHhCCcccCCCCEEEEC
Confidence            443  223344444456689999999997421100000  0    0001124689999999999887653 468999988


Q ss_pred             cCC
Q 022625          285 EIS  287 (294)
Q Consensus       285 ~g~  287 (294)
                      +|-
T Consensus       240 gG~  242 (604)
T 2et6_A          240 AGF  242 (604)
T ss_dssp             TTE
T ss_pred             CCe
Confidence            773

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.15  E-value=4.8e-10  Score=105.59  Aligned_cols=177  Identities=13%  Similarity=0.028  Sum_probs=110.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEEcCccchhh------------------hcCCCcEEeecCCCCHHHHH
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAME------------------SFGTYVESMAGDASNKKFLK  158 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~-~g~~V~~~~R~~~~~~~------------------~~~~~v~~v~~D~~d~~~l~  158 (294)
                      .+|++|||||+++||+++++.|++ .|++|+++.|+.+...+                  ..+..+..+.+|++|.+.++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            379999999999999999999999 99999999987654321                  12345788999999997776


Q ss_pred             HHh--------cCCcEEEEcCCc---------------------------------------------------------
Q 022625          159 TAL--------RGVRSIICPSEG---------------------------------------------------------  173 (294)
Q Consensus       159 ~~l--------~~~d~Vi~~~~~---------------------------------------------------------  173 (294)
                      +++        ..+|++||+.+.                                                         
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            554        356999997311                                                         


Q ss_pred             ----hHHhhhhhcC----CCEEEEecccccccCCCCc--hhccchhH--HHHHHHHHHHHHhCCCCEEEEEccceecCCC
Q 022625          174 ----FISNAGSLKG----VQHVILLSQLSVYRGSGGI--QALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPG  241 (294)
Q Consensus       174 ----~~~~~~~~~g----v~r~V~vSs~~~~~~~~~~--~~~~~~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~  241 (294)
                          ++...+....    -.++|++||..+..+....  ..|..+|.  ..+.+.....+...|+++++|.||.+.....
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~  299 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS  299 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence                0011111111    2589999998765543322  34444432  1233444445566899999999999863211


Q ss_pred             CCc-ceeec---cCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          242 GKQ-GFQFE---EGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       242 ~~~-~~~~~---~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      ... .....   ....-...-..||+|+.+.+++.+.
T Consensus       300 ~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~  336 (422)
T 3s8m_A          300 AAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRER  336 (422)
T ss_dssp             GGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred             hcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcch
Confidence            100 00000   0000011123489999999988664

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.11  E-value=8.8e-10  Score=112.16  Aligned_cols=174  Identities=20%  Similarity=0.221  Sum_probs=119.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHH-HCCC-eEEEEEcCccc---hhhh------cCCCcEEeecCCCCHHHHHHHhcC--
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLI-VKRT-RIKALVKDKRN---AMES------FGTYVESMAGDASNKKFLKTALRG--  163 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~-~~g~-~V~~~~R~~~~---~~~~------~~~~v~~v~~D~~d~~~l~~~l~~--  163 (294)
                      .++++++||||+|+||+++++.|+ ++|+ +|++++|+...   +.+.      .+..+.++.+|++|.++++++++.  
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            357899999999999999999999 7998 58999998432   2211      234688999999999999998864  


Q ss_pred             ----CcEEEEcCC----ch----------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHH
Q 022625          164 ----VRSIICPSE----GF----------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL  213 (294)
Q Consensus       164 ----~d~Vi~~~~----~~----------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~  213 (294)
                          +|+|||+++    +.                      +.+++ .... +||++||..+..+..+...|..+|  .+
T Consensus       608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~-~~~l-~iV~~SS~ag~~g~~g~~~YaAak--a~  683 (795)
T 3slk_A          608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELI-DPDV-ALVLFSSVSGVLGSGGQGNYAAAN--SF  683 (795)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHS-CTTS-EEEEEEETHHHHTCSSCHHHHHHH--HH
T ss_pred             HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHH-hhCC-EEEEEccHHhcCCCCCCHHHHHHH--HH
Confidence                489999822    10                      11122 1122 899999998876666666665544  33


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCCc----ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      .+....+++..|++++.|.||.+.+ .+...    ...-.........++.+++...+..++..+.
T Consensus       684 ~~alA~~~~~~Gi~v~sI~pG~v~t-~g~~~~~~~~~~~~~~~~g~~~l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          684 LDALAQQRQSRGLPTRSLAWGPWAE-HGMASTLREAEQDRLARSGLLPISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCSC-CCHHHHHHHHHHHHHHHTTBCCCCHHHHHHHHHHHHTSSC
T ss_pred             HHHHHHHHHHcCCeEEEEECCeECc-chhhccccHHHHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            4444455677899999999998762 21000    0000001123456889999999998887643

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.11  E-value=1.2e-09  Score=102.10  Aligned_cols=176  Identities=11%  Similarity=0.018  Sum_probs=109.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEEcCccchh------------------hhcCCCcEEeecCCCCHHHHH
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKFLK  158 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~-~g~~V~~~~R~~~~~~------------------~~~~~~v~~v~~D~~d~~~l~  158 (294)
                      .+|+++||||+++||+++++.|++ +|++|+++.|+.+...                  ...+..+..+.+|++|.+.++
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~  125 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ  125 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            479999999999999999999999 9999999988754321                  112346778999999998877


Q ss_pred             HHhc-------CCcEEEEcCCc----------------------------------------h-----------------
Q 022625          159 TALR-------GVRSIICPSEG----------------------------------------F-----------------  174 (294)
Q Consensus       159 ~~l~-------~~d~Vi~~~~~----------------------------------------~-----------------  174 (294)
                      ++++       .+|++||+.+.                                        .                 
T Consensus       126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~  205 (405)
T 3zu3_A          126 LTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGE  205 (405)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchh
Confidence            6654       46999997210                                        0                 


Q ss_pred             ----HHhhhhhcC----CCEEEEecccccccCCCCc--hhccchhH--HHHHHHHHHHHHhC-CCCEEEEEccceecCCC
Q 022625          175 ----ISNAGSLKG----VQHVILLSQLSVYRGSGGI--QALMKGNA--RKLAEQDESMLMAS-GIPYTIIRTGVLQNTPG  241 (294)
Q Consensus       175 ----~~~~~~~~g----v~r~V~vSs~~~~~~~~~~--~~~~~~~~--~~~~~~ae~~l~~~-gl~~tivRPg~l~~~~~  241 (294)
                          +...+....    -.++|++||.....+....  ..|..+|.  ..+.+.....+... |+++++|.||.+.....
T Consensus       206 ~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s  285 (405)
T 3zu3_A          206 DWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQAS  285 (405)
T ss_dssp             HHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHH
T ss_pred             HHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchh
Confidence                011111111    2589999998876554433  45544442  22334444445667 99999999998762110


Q ss_pred             -CCcceeec---cCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          242 -GKQGFQFE---EGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       242 -~~~~~~~~---~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                       ........   ....-...=..||+++.+.+++..
T Consensus       286 ~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          286 SAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             HTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred             hcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence             00000000   000001111348899999988865

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.10  E-value=1.1e-09  Score=103.51  Aligned_cols=186  Identities=9%  Similarity=-0.015  Sum_probs=114.4

Q ss_pred             CCCeEEEEcCCChHHHH--HHHHHHHCCCeEEEEEcCccchh------------------hhcCCCcEEeecCCCCHHHH
Q 022625           98 ARDAVLVTDGDSDIGQM--VILSLIVKRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKFL  157 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~--l~~~L~~~g~~V~~~~R~~~~~~------------------~~~~~~v~~v~~D~~d~~~l  157 (294)
                      .+|+++||||+++||.+  +++.|+++|++|+++.|+.....                  ...+..+..+.+|++|.+++
T Consensus        59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v  138 (418)
T 4eue_A           59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETK  138 (418)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHH
Confidence            57999999999999999  99999999999999999754311                  11234678899999999888


Q ss_pred             HHHhc-------CCcEEEEcCCc---------------------------------------------------------
Q 022625          158 KTALR-------GVRSIICPSEG---------------------------------------------------------  173 (294)
Q Consensus       158 ~~~l~-------~~d~Vi~~~~~---------------------------------------------------------  173 (294)
                      +++++       .+|++||+.+.                                                         
T Consensus       139 ~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~  218 (418)
T 4eue_A          139 DKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGG  218 (418)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhH
Confidence            77654       45999997221                                                         


Q ss_pred             ----hHHhhhhhc----CCCEEEEecccccccCCCCc--hhccchhH--HHHHHHHHHHHHh-CCCCEEEEEccceecCC
Q 022625          174 ----FISNAGSLK----GVQHVILLSQLSVYRGSGGI--QALMKGNA--RKLAEQDESMLMA-SGIPYTIIRTGVLQNTP  240 (294)
Q Consensus       174 ----~~~~~~~~~----gv~r~V~vSs~~~~~~~~~~--~~~~~~~~--~~~~~~ae~~l~~-~gl~~tivRPg~l~~~~  240 (294)
                          ++...+...    +-.++|++||.....+....  ..|..+|.  ..+.+.....+.. .|+++++|.||.+....
T Consensus       219 ~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~  298 (418)
T 4eue_A          219 EDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKA  298 (418)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHH
T ss_pred             HHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChh
Confidence                001111111    12579999998776544433  45544443  2233444455666 79999999999876211


Q ss_pred             C-CCcceeec---cCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEE
Q 022625          241 G-GKQGFQFE---EGCAANGSLSKEDAAFICVEALESIPQTGLIFEV  283 (294)
Q Consensus       241 ~-~~~~~~~~---~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v  283 (294)
                      . ........   ....-...=..||+++.+.+++.+.-..+....+
T Consensus       299 s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd~~~~g~~~~~  345 (418)
T 4eue_A          299 SAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFSEKIYSNEKIQF  345 (418)
T ss_dssp             HHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTTSSSSCCCC
T ss_pred             hhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhccccCCCcccc
Confidence            0 00000000   0000001123588899988888764444443333

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.05  E-value=5.1e-10  Score=120.84  Aligned_cols=185  Identities=12%  Similarity=0.048  Sum_probs=114.0

Q ss_pred             cCCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEE-EcCccchhh-------hc---CCCcEEeecCCCCHHHHHHHhc-
Q 022625           96 EEARDAVLVTDGDSD-IGQMVILSLIVKRTRIKAL-VKDKRNAME-------SF---GTYVESMAGDASNKKFLKTALR-  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~-IG~~l~~~L~~~g~~V~~~-~R~~~~~~~-------~~---~~~v~~v~~D~~d~~~l~~~l~-  162 (294)
                      .+.+|+++||||+++ ||++++++|+++|++|+++ .|+.++..+       ..   +..+.++.+|++|.++++++++ 
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~  751 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  751 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence            467899999999998 9999999999999999998 466654321       11   3457889999999988887663 


Q ss_pred             ------------CCcEEEEcCC----c--h-----------------------HHhhhh------hcCCCEEEEeccccc
Q 022625          163 ------------GVRSIICPSE----G--F-----------------------ISNAGS------LKGVQHVILLSQLSV  195 (294)
Q Consensus       163 ------------~~d~Vi~~~~----~--~-----------------------~~~~~~------~~gv~r~V~vSs~~~  195 (294)
                                  .+|++||+++    +  +                       +..+++      +.+-.+||++||..+
T Consensus       752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag  831 (1887)
T 2uv8_A          752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG  831 (1887)
T ss_dssp             HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence                        4799999821    1  1                       011111      112258999999877


Q ss_pred             ccCCCCchhccchhHHHHHHHHHHHHHh---CCCCEEEEEcccee-cCCCCC-cc-eeeccCCCCCCCcCHHHHHHHHHH
Q 022625          196 YRGSGGIQALMKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQ-NTPGGK-QG-FQFEEGCAANGSLSKEDAAFICVE  269 (294)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~ae~~l~~---~gl~~tivRPg~l~-~~~~~~-~~-~~~~~g~~~~~~Is~eDvA~~iv~  269 (294)
                      ..+  ....|..+|..-.. .....+..   ..|+++.|+||++. .+.... .. ..... .......+++|+|.++++
T Consensus       832 ~~g--g~~aYaASKAAL~~-Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~~~-~~plr~~sPEEVA~avlf  907 (1887)
T 2uv8_A          832 TFG--GDGMYSESKLSLET-LFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIE-KMGVRTFSQKEMAFNLLG  907 (1887)
T ss_dssp             CSS--CBTTHHHHHHHGGG-HHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHHHH-TTSCCCEEHHHHHHHHHG
T ss_pred             ccC--CCchHHHHHHHHHH-HHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHHHH-hcCCCCCCHHHHHHHHHH
Confidence            654  33345433321100 10111221   22899999999986 221110 00 00000 111234589999999999


Q ss_pred             HhhCC-C--CCCcEEEEe
Q 022625          270 ALESI-P--QTGLIFEVC  284 (294)
Q Consensus       270 aL~~~-~--~~g~~~~v~  284 (294)
                      ++... .  ..|..+.+.
T Consensus       908 LaSd~~as~iTGq~I~VD  925 (1887)
T 2uv8_A          908 LLTPEVVELCQKSPVMAD  925 (1887)
T ss_dssp             GGSHHHHHHHHHSCEEEE
T ss_pred             HhCCCccccccCcEEEEE
Confidence            88654 1  246777764

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.99  E-value=5.4e-10  Score=102.23  Aligned_cols=138  Identities=11%  Similarity=0.045  Sum_probs=85.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEEcCcc--chh----hhcCCCcEEeecCCCCHHHHHHHhcCCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKR--NAM----ESFGTYVESMAGDASNKKFLKTALRGVR  165 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~-------~V~~~~R~~~--~~~----~~~~~~v~~v~~D~~d~~~l~~~l~~~d  165 (294)
                      .++|+||||+||||++++..|+.+|+       +|+++++.+.  +..    +.....+.++ +|+.+...+.++++++|
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~D   82 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDAD   82 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCCC
Confidence            46899999999999999999999986       8998887641  111    1111112233 57766566778899999


Q ss_pred             EEEEcCC-----ch---------------HHhhhhhcC-CC-EEEEeccccc-c-----c-C--CCCchhccchhHHHHH
Q 022625          166 SIICPSE-----GF---------------ISNAGSLKG-VQ-HVILLSQLSV-Y-----R-G--SGGIQALMKGNARKLA  214 (294)
Q Consensus       166 ~Vi~~~~-----~~---------------~~~~~~~~g-v~-r~V~vSs~~~-~-----~-~--~~~~~~~~~~~~~~~~  214 (294)
                      +|||+++     +.               +.+++++.+ ++ +|+++|+... .     . .  ..+...|..++. ...
T Consensus        83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl-~~e  161 (327)
T 1y7t_A           83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRL-DHN  161 (327)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHH-HHH
T ss_pred             EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchH-HHH
Confidence            9999821     10               445566765 65 7777776431 0     1 1  112222322221 112


Q ss_pred             HHHHHHHHhCCCCEEEEEccceec
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQN  238 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~  238 (294)
                      +....+.+..|++.+++||.++++
T Consensus       162 r~~~~~a~~~g~~~~~vr~~~V~G  185 (327)
T 1y7t_A          162 RAKAQLAKKTGTGVDRIRRMTVWG  185 (327)
T ss_dssp             HHHHHHHHHHTCCGGGEECCEEEB
T ss_pred             HHHHHHHHHhCcChhheeeeEEEc
Confidence            222233345699999999998773

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.98  E-value=1.3e-09  Score=117.65  Aligned_cols=185  Identities=11%  Similarity=0.025  Sum_probs=114.4

Q ss_pred             cCCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEE-cCccchhh-------hc---CCCcEEeecCCCCHHHHHHHhc-
Q 022625           96 EEARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALV-KDKRNAME-------SF---GTYVESMAGDASNKKFLKTALR-  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~-IG~~l~~~L~~~g~~V~~~~-R~~~~~~~-------~~---~~~v~~v~~D~~d~~~l~~~l~-  162 (294)
                      .+.+|++|||||+|+ ||++++++|+++|++|+++. |+.+++.+       ..   +..+.++.+|++|.+++.++++ 
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            456899999999999 99999999999999999985 55544321       11   3467889999999998887663 


Q ss_pred             ----------CCcEEEEcCC----c--h-----------------------HHhh------hhhcCCCEEEEeccccccc
Q 022625          163 ----------GVRSIICPSE----G--F-----------------------ISNA------GSLKGVQHVILLSQLSVYR  197 (294)
Q Consensus       163 ----------~~d~Vi~~~~----~--~-----------------------~~~~------~~~~gv~r~V~vSs~~~~~  197 (294)
                                .+|+|||+++    +  +                       +..+      +.+.+-.+||++||..+..
T Consensus       729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~  808 (1878)
T 2uv9_A          729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF  808 (1878)
T ss_dssp             HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred             HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence                      4799999821    1  0                       0011      1112236899999987655


Q ss_pred             CCCCchhccchhHHHHHHHHHHHHHh---CCCCEEEEEcccee-cCCCCCcce--eeccCCCCCCCcCHHHHHHHHHHHh
Q 022625          198 GSGGIQALMKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQ-NTPGGKQGF--QFEEGCAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~ae~~l~~---~gl~~tivRPg~l~-~~~~~~~~~--~~~~g~~~~~~Is~eDvA~~iv~aL  271 (294)
                      +  ....|..+|..-. ..+...+.+   .+++++.|.||++. .+.......  .... .......+++|+|.++++++
T Consensus       809 g--g~~aYaASKAAL~-aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~~~~-~~plr~~sPeEVA~avlfLa  884 (1878)
T 2uv9_A          809 G--NDGLYSESKLALE-TLFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAEGVE-KLGVRTFSQQEMAFNLLGLM  884 (1878)
T ss_dssp             S--CCSSHHHHHHHHT-THHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHHHHH-TTTCCCBCHHHHHHHHHHHH
T ss_pred             C--CchHHHHHHHHHH-HHHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHHHHH-hcCCCCCCHHHHHHHHHHHh
Confidence            4  2334433332110 011222221   23999999999876 222111000  0000 11123458999999999988


Q ss_pred             hCCC---CCCcEEEEe
Q 022625          272 ESIP---QTGLIFEVC  284 (294)
Q Consensus       272 ~~~~---~~g~~~~v~  284 (294)
                      ....   ..|..+.+.
T Consensus       885 Sd~a~s~iTGq~I~VD  900 (1878)
T 2uv9_A          885 APAIVNLCQSDPVFAD  900 (1878)
T ss_dssp             SHHHHHHHTTSCEEEE
T ss_pred             CCcccccccCcEEEEE
Confidence            6543   346777763

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.92  E-value=4.6e-10  Score=118.21  Aligned_cols=182  Identities=12%  Similarity=0.060  Sum_probs=112.1

Q ss_pred             cCCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEE-EcCccchhhh---c-------CCCcEEeecCCCCHHHHHHHhc-
Q 022625           96 EEARDAVLVTDGDSD-IGQMVILSLIVKRTRIKAL-VKDKRNAMES---F-------GTYVESMAGDASNKKFLKTALR-  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~-IG~~l~~~L~~~g~~V~~~-~R~~~~~~~~---~-------~~~v~~v~~D~~d~~~l~~~l~-  162 (294)
                      .+.+|+++||||+++ ||++++++|+++|++|+++ .|+.+++.+.   .       +..+.++.+|++|.++++++++ 
T Consensus       473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~  552 (1688)
T 2pff_A          473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  552 (1688)
T ss_dssp             CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred             ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence            467899999999998 9999999999999999998 4665443211   1       2357889999999988877653 


Q ss_pred             ------------CCcEEEEcCC----c--h-----------------------HHhhh------hhcCCCEEEEeccccc
Q 022625          163 ------------GVRSIICPSE----G--F-----------------------ISNAG------SLKGVQHVILLSQLSV  195 (294)
Q Consensus       163 ------------~~d~Vi~~~~----~--~-----------------------~~~~~------~~~gv~r~V~vSs~~~  195 (294)
                                  .+|++||+++    +  +                       +..++      ++.+-.+||++||..+
T Consensus       553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG  632 (1688)
T 2pff_A          553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG  632 (1688)
T ss_dssp             HHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTT
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHh
Confidence                        4799999821    1  0                       11111      1122358999999876


Q ss_pred             ccCCCCchhccchhHHHHHHHHHHH----HHh---CCCCEEEEEccceec-CCCCC-cceeeccCCCCCCCcCHHHHHHH
Q 022625          196 YRGSGGIQALMKGNARKLAEQDESM----LMA---SGIPYTIIRTGVLQN-TPGGK-QGFQFEEGCAANGSLSKEDAAFI  266 (294)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~ae~~----l~~---~gl~~tivRPg~l~~-~~~~~-~~~~~~~g~~~~~~Is~eDvA~~  266 (294)
                      ..+  +...|..+|.     ..+.+    +..   ..++++.|.||++.. +.... ....-..........+++|+|.+
T Consensus       633 ~~G--g~saYaASKA-----AL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~~~~l~~iplR~~sPEEVA~a  705 (1688)
T 2pff_A          633 TFG--GDGMYSESKL-----SLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQKEMAFN  705 (1688)
T ss_dssp             TSS--CBTTHHHHHH-----HHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTCSTTTSSSSCCCCCCCTTHHH
T ss_pred             ccC--CchHHHHHHH-----HHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHHHHHHHhCCCCCCCHHHHHHH
Confidence            554  3334433322     22222    111   237788899998762 21111 00000001111234588999999


Q ss_pred             HHHHhhCC-C--CCCcEEEEe
Q 022625          267 CVEALESI-P--QTGLIFEVC  284 (294)
Q Consensus       267 iv~aL~~~-~--~~g~~~~v~  284 (294)
                      +++++... .  ..|+.+.+.
T Consensus       706 IlFLaSd~sAs~ITGq~I~VD  726 (1688)
T 2pff_A          706 LLGLLTPEVVELCQKSPVMAD  726 (1688)
T ss_dssp             HHHHTSTTHHHHHTTSCCCCC
T ss_pred             HHHHhCCCccccccCcEEEEE
Confidence            99988765 1  246666653

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.88  E-value=1.2e-08  Score=80.73  Aligned_cols=95  Identities=9%  Similarity=0.062  Sum_probs=74.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH-hcCCcEEEEcCCc---
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG---  173 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~~---  173 (294)
                      .+++|+|+|+ |.+|+.+++.|.+.|++|+++.|++++.......+..++.+|.++.+.+.++ +.++|+||++.+.   
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~   83 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ   83 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence            4678999998 9999999999999999999999998776544444567788999998888776 7889999998442   


Q ss_pred             ---hHHhhhhhcCCCEEEEeccc
Q 022625          174 ---FISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       174 ---~~~~~~~~~gv~r~V~vSs~  193 (294)
                         .+...+++.+++++|..++.
T Consensus        84 ~~~~~~~~~~~~~~~~ii~~~~~  106 (144)
T 2hmt_A           84 ASTLTTLLLKELDIPNIWVKAQN  106 (144)
T ss_dssp             HHHHHHHHHHHTTCSEEEEECCS
T ss_pred             HHHHHHHHHHHcCCCeEEEEeCC
Confidence               13345667788877776654

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.82  E-value=2.2e-08  Score=79.82  Aligned_cols=93  Identities=16%  Similarity=0.165  Sum_probs=73.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH-hcCCcEEEEcCCch--
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF--  174 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~~~--  174 (294)
                      .+++|+|+|+ |.+|+.+++.|.++|++|+++.+++++.......++.++.+|.++++.++++ ++++|+||.+.+..  
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~   83 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEF   83 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHH
Confidence            3678999998 9999999999999999999999999876655545788999999999988876 56889999985532  


Q ss_pred             ---HHhhhhhcCCCEEEEec
Q 022625          175 ---ISNAGSLKGVQHVILLS  191 (294)
Q Consensus       175 ---~~~~~~~~gv~r~V~vS  191 (294)
                         ....+++.+..+++...
T Consensus        84 n~~~~~~a~~~~~~~iia~~  103 (141)
T 3llv_A           84 NLKILKALRSVSDVYAIVRV  103 (141)
T ss_dssp             HHHHHHHHHHHCCCCEEEEE
T ss_pred             HHHHHHHHHHhCCceEEEEE
Confidence               33445666655555443

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.75  E-value=1.2e-08  Score=91.37  Aligned_cols=77  Identities=12%  Similarity=0.113  Sum_probs=65.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-----CCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ...+++++||||+|++|+.++.+|+++|++|+++.|+.+++.+...     .+++++.+|++|.+++.++++.+|+|||+
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~  195 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA  195 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence            3568999999999999999999999999999999999776543211     14677889999999999999999999999


Q ss_pred             CC
Q 022625          171 SE  172 (294)
Q Consensus       171 ~~  172 (294)
                      ++
T Consensus       196 ag  197 (287)
T 1lu9_A          196 GA  197 (287)
T ss_dssp             CC
T ss_pred             CC
Confidence            53

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.73  E-value=6.9e-08  Score=76.06  Aligned_cols=92  Identities=17%  Similarity=0.110  Sum_probs=71.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHH-hcCCcEEEEcCCch--
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF--  174 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~~~--  174 (294)
                      +|+|+|+|+ |.+|+.+++.|.+.|++|+++.|++++...... .++.++.+|..+.+.+.+. ++++|+||++.+..  
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~   82 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEV   82 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchH
Confidence            478999997 999999999999999999999998876554332 2577888999998887655 67899999985432  


Q ss_pred             ---HHhhhhhcCCCEEEEec
Q 022625          175 ---ISNAGSLKGVQHVILLS  191 (294)
Q Consensus       175 ---~~~~~~~~gv~r~V~vS  191 (294)
                         +...++..+++++|..+
T Consensus        83 ~~~~~~~~~~~~~~~ii~~~  102 (140)
T 1lss_A           83 NLMSSLLAKSYGINKTIARI  102 (140)
T ss_dssp             HHHHHHHHHHTTCCCEEEEC
T ss_pred             HHHHHHHHHHcCCCEEEEEe
Confidence               34456667777777544

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.70  E-value=2.4e-07  Score=75.17  Aligned_cols=97  Identities=12%  Similarity=0.081  Sum_probs=74.3

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-CCCcEEeecCCCCHHHHHHH-hcCCcEEEEcCC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTA-LRGVRSIICPSE  172 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~  172 (294)
                      ....+++|+|+|+ |.+|..+++.|.+.|++|+++.|++++..... ..++.++.+|..+.+.+.++ +.++|+||.+.+
T Consensus        15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN   93 (155)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence            4556789999997 99999999999999999999999998876554 44677888999998877765 788999999854


Q ss_pred             ch-----HHhhhhh-cCCCEEEEecc
Q 022625          173 GF-----ISNAGSL-KGVQHVILLSQ  192 (294)
Q Consensus       173 ~~-----~~~~~~~-~gv~r~V~vSs  192 (294)
                      ..     ....++. .+..++|...+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~iv~~~~  119 (155)
T 2g1u_A           94 DDSTNFFISMNARYMFNVENVIARVY  119 (155)
T ss_dssp             CHHHHHHHHHHHHHTSCCSEEEEECS
T ss_pred             CcHHHHHHHHHHHHHCCCCeEEEEEC
Confidence            32     3334554 56667766554

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.68  E-value=1.9e-07  Score=75.56  Aligned_cols=92  Identities=17%  Similarity=0.247  Sum_probs=70.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc-cc---hhhhcCCCcEEeecCCCCHHHHHHH-hcCCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RN---AMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~-~~---~~~~~~~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~  172 (294)
                      ..++|+|+|+ |.+|+.+++.|.+.|++|+++.+++ ++   .....+.++.++.+|.+|++.+.++ ++++|+||.+.+
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence            3578999997 9999999999999999999999985 32   3333455789999999999999887 899999999854


Q ss_pred             ch-----HHhhhhhc-CCCEEEEe
Q 022625          173 GF-----ISNAGSLK-GVQHVILL  190 (294)
Q Consensus       173 ~~-----~~~~~~~~-gv~r~V~v  190 (294)
                      ..     ....+++. +..++|..
T Consensus        81 ~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           81 NDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             CHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             ChHHHHHHHHHHHHHCCCCEEEEE
Confidence            32     33345554 55566553

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.60  E-value=2.5e-07  Score=104.02  Aligned_cols=138  Identities=14%  Similarity=0.141  Sum_probs=95.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCccchh-------hh--cCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAM-------ES--FGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~-V~~~~R~~~~~~-------~~--~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      .+|+++||||+|+||+++++.|+++|++ |+++.|+..+..       +.  .+..+.++.+|++|.++++++++     
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            6789999999999999999999999997 777888764421       11  23467888999999988877654     


Q ss_pred             -CCcEEEEcCCc-----h---------------------HHhhhhhc--CCCEEEEecccccccCCCCchhccchhHHHH
Q 022625          163 -GVRSIICPSEG-----F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARKL  213 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~---------------------~~~~~~~~--gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~  213 (294)
                       .+|+|||+++-     +                     +.+++...  ...+||++||..+..+..+...|..+|.  .
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~aaKa--a 2040 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANS--A 2040 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHHHHH--H
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHHHHH--H
Confidence             46999998321     0                     11112211  2379999999887655545445533322  2


Q ss_pred             HHHHHHHHHhCCCCEEEEEcccee
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQ  237 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~  237 (294)
                      ....-++++..|++...+..|.+.
T Consensus      2041 l~~l~~~rr~~Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2041 MERICEKRRHDGLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHTTSCCCEEEECCBC
T ss_pred             HHHHHHHHHHCCCcEEEEEccCcC
Confidence            223344556789999999888654

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.58  E-value=1.3e-07  Score=78.60  Aligned_cols=94  Identities=12%  Similarity=0.098  Sum_probs=72.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH--hcCCcEEEEcCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA--LRGVRSIICPSE  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~--l~~~d~Vi~~~~  172 (294)
                      ...+++|+|+|+ |.+|..+++.|.+. |++|+++.+++++.......++.++.+|.++.+.+.++  ++++|+||.+.+
T Consensus        36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~  114 (183)
T 3c85_A           36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP  114 (183)
T ss_dssp             CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred             CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence            345778999996 99999999999999 99999999999876655445678889999999888877  788999999854


Q ss_pred             ch-----HHhhhhhcC-CCEEEEe
Q 022625          173 GF-----ISNAGSLKG-VQHVILL  190 (294)
Q Consensus       173 ~~-----~~~~~~~~g-v~r~V~v  190 (294)
                      ..     +...++..+ ..+++..
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          115 HHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             SHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             ChHHHHHHHHHHHHHCCCCEEEEE
Confidence            32     333455555 4455543

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.54  E-value=4.7e-07  Score=83.85  Aligned_cols=93  Identities=19%  Similarity=0.184  Sum_probs=73.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCch
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF  174 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~  174 (294)
                      .....|+|+|.|| |++|+.+++.|.+ .++|.+.+|+.+++... .+.+..+..|+.|.+++.++++++|+||++.+.+
T Consensus        12 ~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~-~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~   88 (365)
T 3abi_A           12 IEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV-KEFATPLKVDASNFDKLVEVMKEFELVIGALPGF   88 (365)
T ss_dssp             ----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH-TTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred             ccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH-hccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence            3445678999998 9999999998864 58999999998876654 3467788999999999999999999999996554


Q ss_pred             ----HHhhhhhcCCCEEEEec
Q 022625          175 ----ISNAGSLKGVQHVILLS  191 (294)
Q Consensus       175 ----~~~~~~~~gv~r~V~vS  191 (294)
                          ++++|.+.|+ |+|=+|
T Consensus        89 ~~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           89 LGFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             GHHHHHHHHHHHTC-EEEECC
T ss_pred             ccchHHHHHHhcCc-ceEeee
Confidence                5677788885 676665

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.53  E-value=9.7e-07  Score=99.91  Aligned_cols=75  Identities=8%  Similarity=0.041  Sum_probs=60.5

Q ss_pred             CCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEEcCccc-----hhhh---c---CCCcEEeecCCCCHHHHHHHhc--
Q 022625           97 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALVKDKRN-----AMES---F---GTYVESMAGDASNKKFLKTALR--  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~-IG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~---~---~~~v~~v~~D~~d~~~l~~~l~--  162 (294)
                      +.+|+++||||+++ ||+++++.|+++|++|++..|+.+.     +.+.   .   +..+..+.+|++|.++++++++  
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            67899999999999 9999999999999999999998765     2221   1   2346788999999988877642  


Q ss_pred             ---------CCcEEEEcC
Q 022625          163 ---------GVRSIICPS  171 (294)
Q Consensus       163 ---------~~d~Vi~~~  171 (294)
                               .+|++||++
T Consensus      2214 ~~~~~~~fG~IDILVNNA 2231 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDA 2231 (3089)
T ss_dssp             TSCCEEEESSSEEEECCC
T ss_pred             HhhhhhhcCCCCEEEECC
Confidence                     358888873

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.49  E-value=1.2e-06  Score=69.74  Aligned_cols=73  Identities=15%  Similarity=0.207  Sum_probs=63.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH-hcCCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~  172 (294)
                      .++|+|.|+ |.+|+.+++.|.+.|++|+++.+++++.......++.++.+|.++.+.++++ ++++|+||.+.+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence            568999997 9999999999999999999999999887665556788999999999888775 678899998844

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.47  E-value=3.8e-07  Score=85.77  Aligned_cols=86  Identities=16%  Similarity=0.163  Sum_probs=70.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEEcCccchhhhcC-------CCcEEeecCCCCHHHHHHHhcC--CcE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMESFG-------TYVESMAGDASNKKFLKTALRG--VRS  166 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~-------~~v~~v~~D~~d~~~l~~~l~~--~d~  166 (294)
                      |++|+|+|| |+||+.+++.|++.|   .+|++.+|+.+++.....       ..+..+.+|++|.+++.+++++  +|+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            478999999 999999999999998   389999999887554321       2588899999999999999987  899


Q ss_pred             EEEcCCch----HHhhhhhcCCC
Q 022625          167 IICPSEGF----ISNAGSLKGVQ  185 (294)
Q Consensus       167 Vi~~~~~~----~~~~~~~~gv~  185 (294)
                      ||++++.+    +.+++.+.|+.
T Consensus        80 Vin~ag~~~~~~v~~a~l~~g~~  102 (405)
T 4ina_A           80 VLNIALPYQDLTIMEACLRTGVP  102 (405)
T ss_dssp             EEECSCGGGHHHHHHHHHHHTCC
T ss_pred             EEECCCcccChHHHHHHHHhCCC
Confidence            99995533    55667778865

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.42  E-value=7.3e-07  Score=85.02  Aligned_cols=74  Identities=11%  Similarity=0.073  Sum_probs=63.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      .+++|+|+| +|++|+.+++.|++.|++|++++|+.+++.....  ..+..+.+|++|.+++.++++++|+|||+++
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~   77 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP   77 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCc
Confidence            468999998 6999999999999999999999999877655432  2467888999999999999999999999844

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.40  E-value=1.4e-06  Score=74.62  Aligned_cols=91  Identities=19%  Similarity=0.218  Sum_probs=72.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHH-hcCCcEEEEcCCch---
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF---  174 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~~~---  174 (294)
                      |+|+|+|+ |.+|+.+++.|.++|++|+++.+++++...... .++.++.+|.++.+.++++ ++++|+||.+.+..   
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n   79 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVN   79 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHH
Confidence            57999997 999999999999999999999999987665322 3688999999999999876 78999999985432   


Q ss_pred             --HHhhhhh-cCCCEEEEec
Q 022625          175 --ISNAGSL-KGVQHVILLS  191 (294)
Q Consensus       175 --~~~~~~~-~gv~r~V~vS  191 (294)
                        +...+++ .+..++|-..
T Consensus        80 ~~~~~~a~~~~~~~~iia~~   99 (218)
T 3l4b_C           80 LFIAQLVMKDFGVKRVVSLV   99 (218)
T ss_dssp             HHHHHHHHHTSCCCEEEECC
T ss_pred             HHHHHHHHHHcCCCeEEEEE
Confidence              3334444 5777776543

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.38  E-value=7.7e-07  Score=85.20  Aligned_cols=97  Identities=14%  Similarity=0.073  Sum_probs=70.5

Q ss_pred             CCCcCCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           93 EFPEEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        93 ~~~~~~~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ++....+++|+|+|| |++|+.++..|++. |++|++++|+.+++.+... .++..+.+|+.|.+++.++++++|+||++
T Consensus        17 ~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~   95 (467)
T 2axq_A           17 IEGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISL   95 (467)
T ss_dssp             ------CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEEC
T ss_pred             cccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEEC
Confidence            345567889999998 99999999999998 7899999999887654322 24677889999999999999999999999


Q ss_pred             CCch----HHhhhhhcCCCEEEEec
Q 022625          171 SEGF----ISNAGSLKGVQHVILLS  191 (294)
Q Consensus       171 ~~~~----~~~~~~~~gv~r~V~vS  191 (294)
                      .+..    +...+.+.|+ +++-++
T Consensus        96 tp~~~~~~v~~a~l~~g~-~vvd~~  119 (467)
T 2axq_A           96 IPYTFHPNVVKSAIRTKT-DVVTSS  119 (467)
T ss_dssp             SCGGGHHHHHHHHHHHTC-EEEECS
T ss_pred             CchhhhHHHHHHHHhcCC-EEEEee
Confidence            5432    3344445553 444443

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.28  E-value=1.9e-06  Score=74.39  Aligned_cols=89  Identities=15%  Similarity=0.044  Sum_probs=71.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH-hcCCcEEEEcCCch---
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF---  174 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~~~---  174 (294)
                      .++|+|.|+ |.+|+.+++.|.+.|+ |+++.+++++..... .++.++.+|.+|.+.++++ ++++|.||.+.+..   
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n   85 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET   85 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHH
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHH
Confidence            578999998 9999999999999999 999999988766555 6789999999999999877 88999999985432   


Q ss_pred             --HHhhhhhcCCC-EEEEe
Q 022625          175 --ISNAGSLKGVQ-HVILL  190 (294)
Q Consensus       175 --~~~~~~~~gv~-r~V~v  190 (294)
                        ....+++.+.+ ++|.-
T Consensus        86 ~~~~~~a~~~~~~~~iia~  104 (234)
T 2aef_A           86 IHCILGIRKIDESVRIIAE  104 (234)
T ss_dssp             HHHHHHHHHHCSSSEEEEE
T ss_pred             HHHHHHHHHHCCCCeEEEE
Confidence              33445666665 55543

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.24  E-value=1.7e-06  Score=72.60  Aligned_cols=94  Identities=16%  Similarity=0.122  Sum_probs=63.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHhc--CCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l~--~~d~Vi~~~~  172 (294)
                      ++++|+|+||+|+||..+++.+...|++|++++|++++.......+... ..|+.+.   +.+.+...  ++|++|++.+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g  116 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEILELTDGYGVDVVLNSLA  116 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence            5789999999999999999999999999999999887654332222222 2355543   33334332  5899999854


Q ss_pred             ch-HH---hhhhhcCCCEEEEecccc
Q 022625          173 GF-IS---NAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       173 ~~-~~---~~~~~~gv~r~V~vSs~~  194 (294)
                      +. +.   +.++..  .++|.+++..
T Consensus       117 ~~~~~~~~~~l~~~--G~~v~~g~~~  140 (198)
T 1pqw_A          117 GEAIQRGVQILAPG--GRFIELGKKD  140 (198)
T ss_dssp             THHHHHHHHTEEEE--EEEEECSCGG
T ss_pred             hHHHHHHHHHhccC--CEEEEEcCCC
Confidence            32 22   223333  4899988754

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.21  E-value=3.6e-06  Score=76.85  Aligned_cols=95  Identities=15%  Similarity=0.145  Sum_probs=65.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccch--hhhcCCCcE-EeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA--MESFGTYVE-SMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~--~~~~~~~v~-~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ++++|+||||+|++|..++..|+.+|  .+|++++++++..  .++...... .+.+ +.+...+.++++++|+||++.+
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~al~gaDvVi~~ag   85 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAALTGMDLIIVPAG   85 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHHcCCCCEEEEcCC
Confidence            35799999999999999999999998  7999988776521  111111110 1111 2345677889999999999821


Q ss_pred             -----c-----h----------HHhhhhhcCCCEEEEeccc
Q 022625          173 -----G-----F----------ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       173 -----~-----~----------~~~~~~~~gv~r~V~vSs~  193 (294)
                           +     +          +.+.+.+.+++.+|+++|.
T Consensus        86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN  126 (326)
T 1smk_A           86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN  126 (326)
T ss_dssp             CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence                 1     0          3445667788888888764

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.13  E-value=6.6e-06  Score=71.39  Aligned_cols=171  Identities=11%  Similarity=0.136  Sum_probs=94.4

Q ss_pred             CCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHH----
Q 022625           98 ARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFL----  157 (294)
Q Consensus        98 ~~~~vlVtGa----------------tG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l----  157 (294)
                      .||+||||||                +|++|.+++++++++|++|+++.|...... ..+.+++++  |+.+.+.+    
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-~~~~~~~~~--~v~s~~em~~~v   78 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-EPHPNLSIR--EITNTKDLLIEM   78 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-CCCTTEEEE--ECCSHHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-cCCCCeEEE--EHhHHHHHHHHH
Confidence            4799999999                999999999999999999999999764211 112345554  45555443    


Q ss_pred             HHHhcCCcEEEEcCC--chH-------Hh---------h----hhhcCCCE------EEEeccccc------ccCCCCch
Q 022625          158 KTALRGVRSIICPSE--GFI-------SN---------A----GSLKGVQH------VILLSQLSV------YRGSGGIQ  203 (294)
Q Consensus       158 ~~~l~~~d~Vi~~~~--~~~-------~~---------~----~~~~gv~r------~V~vSs~~~------~~~~~~~~  203 (294)
                      .+.+.++|++|++++  .+.       .+         .    ....++++      +-+.-....      ..+....-
T Consensus        79 ~~~~~~~Dili~aAAvsD~~p~~~~~~e~~~~~~~~~~~l~~~~~~~KIkk~~~~l~l~L~~~PdIL~~l~~~~p~~~lV  158 (232)
T 2gk4_A           79 QERVQDYQVLIHSMAVSDYTPVYMTGLEEVQASSNLKEFLSKQNHQAKISSTDEVQVLFLKKTPKIISLVKEWNPTIHLI  158 (232)
T ss_dssp             HHHGGGCSEEEECSBCCSEEEEEEEEHHHHHHCSCGGGGGGCCGGGCCCCTTCSEEEEEEEECCCCHHHHHHHCTTSEEE
T ss_pred             HHhcCCCCEEEEcCccccccchhhcchhhhhccccchhhhcccccccCccCCCCCeeEEEEeChHHHHHHHhcCCCcEEE
Confidence            445567899999832  110       00         0    11223321      111111111      01111111


Q ss_pred             hccchh---HHHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          204 ALMKGN---ARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       204 ~~~~~~---~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                      .+....   .......+..-|...++++++...-.-+ +........+.... .....+..++|+.++..+..
T Consensus       159 GFaaEt~~~~~~l~~~A~~kL~~k~~D~IvaN~v~~f-~~~~n~v~li~~~~-~~~~~sK~eiA~~I~~~i~~  229 (232)
T 2gk4_A          159 GFKLLVDVTEDHLVDIARKSLIKNQADLIIANDLTQI-SADQHRAIFVEKNQ-LQTVQTKEEIAELLLEKIQA  229 (232)
T ss_dssp             EEEEESSCCHHHHHHHHHHHHHHHTCSEEEEEEGGGB-CSSCBCEEEECSSC-EEEESSHHHHHHHHHHHHHT
T ss_pred             EEEeccCCchhHHHHHHHHHHHHhCCCEEEEeccccc-CcCceEEEEEECCC-cccCCCHHHHHHHHHHHHHh
Confidence            111000   0123445666677889999887754322 22223333333322 44556889999999987754

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.04  E-value=1.2e-05  Score=74.82  Aligned_cols=73  Identities=16%  Similarity=0.165  Sum_probs=58.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEEcCccchhh------------------hcCCCcEEeecCCCCHHHHH
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKRNAME------------------SFGTYVESMAGDASNKKFLK  158 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~-~~g~~V~~~~R~~~~~~~------------------~~~~~v~~v~~D~~d~~~l~  158 (294)
                      .+|++|||||+.+||.+.+..|+ ..|..++++.++.+....                  ..+.....+.+|++|.+.++
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~  128 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA  128 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence            47999999999999999999998 679999999886543221                  12346788999999998877


Q ss_pred             HHhc-------CCcEEEEc
Q 022625          159 TALR-------GVRSIICP  170 (294)
Q Consensus       159 ~~l~-------~~d~Vi~~  170 (294)
                      ++++       ++|++||+
T Consensus       129 ~vi~~i~~~~G~IDiLVhS  147 (401)
T 4ggo_A          129 QVIEEAKKKGIKFDLIVYS  147 (401)
T ss_dssp             HHHHHHHHTTCCEEEEEEC
T ss_pred             HHHHHHHHhcCCCCEEEEe
Confidence            7664       56999997

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.04  E-value=1.9e-05  Score=68.30  Aligned_cols=170  Identities=7%  Similarity=0.052  Sum_probs=94.2

Q ss_pred             CCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH
Q 022625           97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA  160 (294)
Q Consensus        97 ~~~~~vlVtGa----------------tG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~  160 (294)
                      +.+|+|+||||                +|++|.+++++|+++|++|+++.++.. +.  .+.+++  ..|+++.+.+.+.
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--~~~g~~--~~dv~~~~~~~~~   80 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--TPPFVK--RVDVMTALEMEAA   80 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--CCTTEE--EEECCSHHHHHHH
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--cCCCCe--EEccCcHHHHHHH
Confidence            57899999999                799999999999999999999988652 11  122343  4578887655443


Q ss_pred             ----hcCCcEEEEcCC--chHHhhhhhcCCCE---------EEEeccccc------c-cCCCCchhccchhHHHHHHHHH
Q 022625          161 ----LRGVRSIICPSE--GFISNAGSLKGVQH---------VILLSQLSV------Y-RGSGGIQALMKGNARKLAEQDE  218 (294)
Q Consensus       161 ----l~~~d~Vi~~~~--~~~~~~~~~~gv~r---------~V~vSs~~~------~-~~~~~~~~~~~~~~~~~~~~ae  218 (294)
                          +..+|++|++++  .+........++++         +-+.-+-..      . .+....-.+. .......+.+.
T Consensus        81 v~~~~~~~Dili~~Aav~d~~p~~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~~VGFa-aEt~~l~e~A~  159 (226)
T 1u7z_A           81 VNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFA-AETNNVEEYAR  159 (226)
T ss_dssp             HHHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEEEEEE-EESSSHHHHHH
T ss_pred             HHHhcCCCCEEEECCcccCCCCccCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcEEEEcc-hhhchHHHHHH
Confidence                457899999833  11000011122222         111111100      0 0100010010 00112345666


Q ss_pred             HHHHhCCCCEEEEEccceec-CCCCCc--ceeecc-CCCCCCCcCHHHHHHHHHHHhh
Q 022625          219 SMLMASGIPYTIIRTGVLQN-TPGGKQ--GFQFEE-GCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       219 ~~l~~~gl~~tivRPg~l~~-~~~~~~--~~~~~~-g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                      .-|...++++++..+-.-.+ +.+...  ...+.. |.......+.+++|+.++..+.
T Consensus       160 ~kL~~k~~d~ivaN~~~~~~~~f~~~~n~v~li~~~~~~~~~~~sK~~vA~~I~~~i~  217 (226)
T 1u7z_A          160 QKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEIV  217 (226)
T ss_dssp             HHHHHHTCSEEEEEECSSTTSSTTSSEEEEEEEETTEEEEEEEEEHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCEEEEeeccccCCccCCCceEEEEEeCCCcEecCCCCHHHHHHHHHHHHH
Confidence            77788999999998764221 222211  222222 2223445688999999988764

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=98.01  E-value=2e-05  Score=74.22  Aligned_cols=86  Identities=14%  Similarity=0.093  Sum_probs=70.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH-hcCCcEEEEcCCch---
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF---  174 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~~~---  174 (294)
                      +++|+|.|+ |.+|+.+++.|.+.|++|+++.+++++.......++.++.+|.++.+.++++ ++++|+||.+.+..   
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n   82 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTN   82 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHH
Confidence            468999997 9999999999999999999999999887665555788999999999999887 78899999985432   


Q ss_pred             --HHhhhhhcCCC
Q 022625          175 --ISNAGSLKGVQ  185 (294)
Q Consensus       175 --~~~~~~~~gv~  185 (294)
                        +...+++.+..
T Consensus        83 ~~i~~~ar~~~p~   95 (413)
T 3l9w_A           83 LQLTEMVKEHFPH   95 (413)
T ss_dssp             HHHHHHHHHHCTT
T ss_pred             HHHHHHHHHhCCC
Confidence              33345555544

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.99  E-value=3.1e-06  Score=77.34  Aligned_cols=93  Identities=11%  Similarity=0.059  Sum_probs=62.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEEcC----ccchhh----hcCCCcEEeecCCCCHHHHHHHhcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKD----KRNAME----SFGTYVESMAGDASNKKFLKTALRG  163 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~-------~V~~~~R~----~~~~~~----~~~~~v~~v~~D~~d~~~l~~~l~~  163 (294)
                      .++|+||||+|+||+.++..|+.+|.       +|++++++    ++++..    +...... +..|+.....+.+++++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~-~~~~i~~~~~~~~al~~   83 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFP-LLAGMTAHADPMTAFKD   83 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCT-TEEEEEEESSHHHHTTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccc-ccCcEEEecCcHHHhCC
Confidence            47999999999999999999999885       78888887    433221    1111011 12355444556788999


Q ss_pred             CcEEEEcCC-----ch---------------HHhhhhhcC-CC-EEEEecc
Q 022625          164 VRSIICPSE-----GF---------------ISNAGSLKG-VQ-HVILLSQ  192 (294)
Q Consensus       164 ~d~Vi~~~~-----~~---------------~~~~~~~~g-v~-r~V~vSs  192 (294)
                      +|+|||+.+     +.               +.+.+.+.+ .+ +||++|.
T Consensus        84 aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN  134 (329)
T 1b8p_A           84 ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN  134 (329)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence            999999821     10               334566663 66 8888885

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.92  E-value=1.3e-05  Score=73.25  Aligned_cols=95  Identities=13%  Similarity=0.043  Sum_probs=62.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH----HHHHHHhc-CCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK----KFLKTALR-GVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~----~~l~~~l~-~~d~Vi~~~  171 (294)
                      .++++|+|+||+|.||..+++.+...|++|++++|++++.......+... ..|+.+.    +.+.+... ++|+||++.
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~  246 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEV-FIDFTKEKDIVGAVLKATDGGAHGVINVS  246 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCE-EEETTTCSCHHHHHHHHHTSCEEEEEECS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCce-EEecCccHhHHHHHHHHhCCCCCEEEECC
Confidence            46789999999999999999999999999999999887654322222222 2366532    22333332 689999985


Q ss_pred             Cc-h-HHhh---hhhcCCCEEEEecccc
Q 022625          172 EG-F-ISNA---GSLKGVQHVILLSQLS  194 (294)
Q Consensus       172 ~~-~-~~~~---~~~~gv~r~V~vSs~~  194 (294)
                      +. . +..+   ++..  .++|.+++..
T Consensus       247 g~~~~~~~~~~~l~~~--G~iv~~g~~~  272 (347)
T 2hcy_A          247 VSEAAIEASTRYVRAN--GTTVLVGMPA  272 (347)
T ss_dssp             SCHHHHHHHTTSEEEE--EEEEECCCCT
T ss_pred             CcHHHHHHHHHHHhcC--CEEEEEeCCC
Confidence            53 2 2222   2222  4888887643

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.86  E-value=3.2e-05  Score=70.18  Aligned_cols=75  Identities=8%  Similarity=0.095  Sum_probs=59.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcC---ccchhhhc---C--CCcEEeecCCCCHHHHHHHhcCCcE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAMESF---G--TYVESMAGDASNKKFLKTALRGVRS  166 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~---~~~~~~~~---~--~~v~~v~~D~~d~~~l~~~l~~~d~  166 (294)
                      ...+++++|+|| |++|+.++..|++.|. +|+++.|+   .+++.+..   .  ....+...++.+.+.+.+.+.++|+
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDi  229 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVI  229 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCE
Confidence            456899999997 8999999999999998 89999999   55544321   1  1234445577787888888999999


Q ss_pred             EEEcC
Q 022625          167 IICPS  171 (294)
Q Consensus       167 Vi~~~  171 (294)
                      ||+++
T Consensus       230 IINaT  234 (315)
T 3tnl_A          230 FTNAT  234 (315)
T ss_dssp             EEECS
T ss_pred             EEECc
Confidence            99984

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.86  E-value=2.8e-05  Score=70.41  Aligned_cols=93  Identities=9%  Similarity=-0.011  Sum_probs=58.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEc--Cccchhh----hcC-CCcEEeecCCCCH-HHHHHHhcCCcEEEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVK--DKRNAME----SFG-TYVESMAGDASNK-KFLKTALRGVRSIIC  169 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R--~~~~~~~----~~~-~~v~~v~~D~~d~-~~l~~~l~~~d~Vi~  169 (294)
                      ++|+||||+|++|+.++..|+.++.  ++.++++  +++++..    ... ..+.-...++.+. +++.++++++|+|||
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~   80 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence            5899999999999999999998885  5777777  5433211    100 0000001122221 235677999999999


Q ss_pred             cCC-----c---------------hHHhhhhhcCCCEEEEeccc
Q 022625          170 PSE-----G---------------FISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       170 ~~~-----~---------------~~~~~~~~~gv~r~V~vSs~  193 (294)
                      +.+     +               .+.+++.+.+ +.+|+++|.
T Consensus        81 ~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN  123 (313)
T 1hye_A           81 TSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN  123 (313)
T ss_dssp             CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence            821     1               0445567778 888888874

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.79  E-value=3.9e-05  Score=69.87  Aligned_cols=88  Identities=15%  Similarity=0.082  Sum_probs=69.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH-hcCCcEEEEcCCch---
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF---  174 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~~~---  174 (294)
                      .++++|.|+ |.+|+.++++|.++|+ |+++.+++++.. ....++.++.+|.+|++.++++ ++++|+++.+.+..   
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~n  191 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET  191 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHHH
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHHH
Confidence            468999997 9999999999999999 999999998776 5446789999999999999887 88999999885432   


Q ss_pred             --HHhhhhhcCCC-EEEE
Q 022625          175 --ISNAGSLKGVQ-HVIL  189 (294)
Q Consensus       175 --~~~~~~~~gv~-r~V~  189 (294)
                        ....+++.+++ +++-
T Consensus       192 ~~~~~~ar~~~~~~~iia  209 (336)
T 1lnq_A          192 IHCILGIRKIDESVRIIA  209 (336)
T ss_dssp             HHHHHHHHTTCTTSEEEE
T ss_pred             HHHHHHHHHHCCCCeEEE
Confidence              23345555654 4443

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.79  E-value=3.9e-05  Score=73.27  Aligned_cols=92  Identities=13%  Similarity=0.125  Sum_probs=71.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHH-hcCCcEEEEcCCch-
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF-  174 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~~~-  174 (294)
                      +.|+|+|.|+ |.+|+.+++.|...|++|+++.+++++...... -.+.++.||.++++.++++ ++.+|.++.++... 
T Consensus         2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De   80 (461)
T 4g65_A            2 NAMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDE   80 (461)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHH
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChH
Confidence            4689999998 999999999999999999999999987765432 2688999999999999876 68899999885432 


Q ss_pred             ----HHhhhhh-cCCCEEEEe
Q 022625          175 ----ISNAGSL-KGVQHVILL  190 (294)
Q Consensus       175 ----~~~~~~~-~gv~r~V~v  190 (294)
                          ....+++ .++.++|--
T Consensus        81 ~Nl~~~~~Ak~~~~~~~~iar  101 (461)
T 4g65_A           81 TNMAACQVAFTLFNTPNRIAR  101 (461)
T ss_dssp             HHHHHHHHHHHHHCCSSEEEE
T ss_pred             HHHHHHHHHHHhcCCccceeE
Confidence                2223444 366665544

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.76  E-value=1.6e-05  Score=71.74  Aligned_cols=87  Identities=8%  Similarity=0.114  Sum_probs=59.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEc--Cccchhhh---------cCCCcEEeecCCCCHHHHHHHhcCCcE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVK--DKRNAMES---------FGTYVESMAGDASNKKFLKTALRGVRS  166 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R--~~~~~~~~---------~~~~v~~v~~D~~d~~~l~~~l~~~d~  166 (294)
                      ++|+||||+|++|..++..|+.++.  ++.++++  +++++...         +...+++.. +  +    .++++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence            5899999999999999999998885  6777777  55432210         011223322 1  2    456899999


Q ss_pred             EEEcCC-----ch---------------HHhhhhhcCCCEEEEeccc
Q 022625          167 IICPSE-----GF---------------ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       167 Vi~~~~-----~~---------------~~~~~~~~gv~r~V~vSs~  193 (294)
                      |||+.+     +.               +.+.+.+.+.+.+|+++|.
T Consensus        74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN  120 (303)
T 1o6z_A           74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN  120 (303)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            999821     10               3445667788888888764

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.75  E-value=3.7e-05  Score=69.77  Aligned_cols=97  Identities=14%  Similarity=0.088  Sum_probs=62.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCC-H---HHHHHHh-cCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-K---KFLKTAL-RGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d-~---~~l~~~l-~~~d~Vi~~~  171 (294)
                      .++++|+|+||+|+||..+++.+...|++|++++|++++......-+.. ...|+++ .   +.+.+.. .++|++|++.
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~  222 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFD-AAFNYKTVNSLEEALKKASPDGYDCYFDNV  222 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EEEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCc-EEEecCCHHHHHHHHHHHhCCCCeEEEECC
Confidence            4678999999999999999999999999999999987765433111222 2236654 2   2233332 2689999996


Q ss_pred             CchHH-hhhhhc-CCCEEEEecccc
Q 022625          172 EGFIS-NAGSLK-GVQHVILLSQLS  194 (294)
Q Consensus       172 ~~~~~-~~~~~~-gv~r~V~vSs~~  194 (294)
                      ++... .+.... .-.++|+++...
T Consensus       223 g~~~~~~~~~~l~~~G~~v~~g~~~  247 (333)
T 1v3u_A          223 GGEFLNTVLSQMKDFGKIAICGAIS  247 (333)
T ss_dssp             CHHHHHHHHTTEEEEEEEEECCCCC
T ss_pred             ChHHHHHHHHHHhcCCEEEEEeccc
Confidence            54322 221111 124888887654

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.72  E-value=3e-05  Score=71.82  Aligned_cols=93  Identities=11%  Similarity=0.097  Sum_probs=66.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ...+++|+|+|+ |.||+.+++.|...|++|++++|+++++...   .+..   +..|..+.+.+.+.++++|+||++.+
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~---~~~~~~~~~~l~~~~~~~DvVi~~~g  238 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR---VITLTATEANIKKSVQHADLLIGAVL  238 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS---EEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce---EEEecCCHHHHHHHHhCCCEEEECCC
Confidence            356799999999 9999999999999999999999998765432   2222   34567778888899999999999832


Q ss_pred             --c-----h----HHhhhhhcCCCEEEEecccc
Q 022625          173 --G-----F----ISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       173 --~-----~----~~~~~~~~gv~r~V~vSs~~  194 (294)
                        .     +    ....++.  -..+|.+|+..
T Consensus       239 ~~~~~~~~li~~~~l~~mk~--gg~iV~v~~~~  269 (369)
T 2eez_A          239 VPGAKAPKLVTRDMLSLMKE--GAVIVDVAVDQ  269 (369)
T ss_dssp             -------CCSCHHHHTTSCT--TCEEEECC---
T ss_pred             CCccccchhHHHHHHHhhcC--CCEEEEEecCC
Confidence              1     0    1222222  25788888754

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.68  E-value=3.4e-05  Score=70.03  Aligned_cols=95  Identities=11%  Similarity=0.074  Sum_probs=62.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHh--cCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l--~~~d~Vi~~~  171 (294)
                      .++++|+|+||+|.||..+++.+...|++|++++|++++......-+.+. ..|.++.   +.+.+..  .++|++|++.
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~i~~~~~~~~~d~vi~~~  222 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHH-TINYSTQDFAEVVREITGGKGVDVVYDSI  222 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHHTTCCEEEEEECS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE-EEECCCHHHHHHHHHHhCCCCCeEEEECC
Confidence            46789999999999999999999999999999999986644322111221 2355443   3444444  3689999995


Q ss_pred             Cch-HHh---hhhhcCCCEEEEecccc
Q 022625          172 EGF-ISN---AGSLKGVQHVILLSQLS  194 (294)
Q Consensus       172 ~~~-~~~---~~~~~gv~r~V~vSs~~  194 (294)
                      ++. +..   .++..  .++|.++...
T Consensus       223 g~~~~~~~~~~l~~~--G~iv~~g~~~  247 (333)
T 1wly_A          223 GKDTLQKSLDCLRPR--GMCAAYGHAS  247 (333)
T ss_dssp             CTTTHHHHHHTEEEE--EEEEECCCTT
T ss_pred             cHHHHHHHHHhhccC--CEEEEEecCC
Confidence            542 222   22232  4788887543

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.68  E-value=3.8e-05  Score=69.47  Aligned_cols=95  Identities=9%  Similarity=0.024  Sum_probs=62.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHhc--CCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l~--~~d~Vi~~~  171 (294)
                      .++++|+|+||+|.||..+++.+...|++|++++|++++.......+.+. ..|..+.   +.+.+...  ++|++|++.
T Consensus       139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi~~~  217 (327)
T 1qor_A          139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQ-VINYREEDLVERLKEITGGKKVRVVYDSV  217 (327)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EEECCCccHHHHHHHHhCCCCceEEEECC
Confidence            36789999999999999999999999999999999877644322111221 2355443   33444332  589999996


Q ss_pred             Cch-HHh---hhhhcCCCEEEEecccc
Q 022625          172 EGF-ISN---AGSLKGVQHVILLSQLS  194 (294)
Q Consensus       172 ~~~-~~~---~~~~~gv~r~V~vSs~~  194 (294)
                      ++. +..   .++..  .++|.+++..
T Consensus       218 g~~~~~~~~~~l~~~--G~iv~~g~~~  242 (327)
T 1qor_A          218 GRDTWERSLDCLQRR--GLMVSFGNSS  242 (327)
T ss_dssp             CGGGHHHHHHTEEEE--EEEEECCCTT
T ss_pred             chHHHHHHHHHhcCC--CEEEEEecCC
Confidence            543 222   22222  4888887653

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.62  E-value=1.1e-05  Score=68.25  Aligned_cols=71  Identities=11%  Similarity=0.040  Sum_probs=50.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCC-CcEEee-cCCCCHHHHHHHhcCCcEEEEcCC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMA-GDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~v~~v~-~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      |+|+|+||+|.+|+.+++.|++.|++|+++.|++++....... +. .+. .|+. ..++.++++++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEeCC
Confidence            5799999999999999999999999999999998765432110 00 000 2222 1345566788999999943

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.60  E-value=9.8e-05  Score=66.98  Aligned_cols=96  Identities=16%  Similarity=0.164  Sum_probs=64.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-cCCCcEEeecCCCCH---HHHHHHh-cCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNK---KFLKTAL-RGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~v~~v~~D~~d~---~~l~~~l-~~~d~Vi~~  170 (294)
                      ..++++|+|+||+|.||..+++.+...|++|++++|++++.... ..-+... ..|..+.   +.+.+.. .++|++|++
T Consensus       147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~  225 (336)
T 4b7c_A          147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG-AIDYKNEDLAAGLKRECPKGIDVFFDN  225 (336)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE-EEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE-EEECCCHHHHHHHHHhcCCCceEEEEC
Confidence            34688999999999999999999999999999999998776544 2222322 2344443   2333332 368999998


Q ss_pred             CCchHHh----hhhhcCCCEEEEecccc
Q 022625          171 SEGFISN----AGSLKGVQHVILLSQLS  194 (294)
Q Consensus       171 ~~~~~~~----~~~~~gv~r~V~vSs~~  194 (294)
                      .++...+    .++..  .++|.++...
T Consensus       226 ~g~~~~~~~~~~l~~~--G~iv~~G~~~  251 (336)
T 4b7c_A          226 VGGEILDTVLTRIAFK--ARIVLCGAIS  251 (336)
T ss_dssp             SCHHHHHHHHTTEEEE--EEEEECCCGG
T ss_pred             CCcchHHHHHHHHhhC--CEEEEEeecc
Confidence            6543222    22222  5888887655

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.58  E-value=6.8e-05  Score=68.35  Aligned_cols=95  Identities=13%  Similarity=0.102  Sum_probs=63.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHhc--CCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l~--~~d~Vi~~~  171 (294)
                      .++++|+|+||+|.+|..+++.+...|++|++++|++++......-+.+. ..|..+.   +.+.+...  ++|+||++.
T Consensus       165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~~  243 (343)
T 2eih_A          165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADE-TVNYTHPDWPKEVRRLTGGKGADKVVDHT  243 (343)
T ss_dssp             CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE-EEETTSTTHHHHHHHHTTTTCEEEEEESS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCE-EEcCCcccHHHHHHHHhCCCCceEEEECC
Confidence            36789999999999999999999999999999999887654332112222 2355543   33444443  689999985


Q ss_pred             Cch-H---HhhhhhcCCCEEEEecccc
Q 022625          172 EGF-I---SNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       172 ~~~-~---~~~~~~~gv~r~V~vSs~~  194 (294)
                      ++. +   .+.++..  .++|.++...
T Consensus       244 g~~~~~~~~~~l~~~--G~~v~~g~~~  268 (343)
T 2eih_A          244 GALYFEGVIKATANG--GRIAIAGASS  268 (343)
T ss_dssp             CSSSHHHHHHHEEEE--EEEEESSCCC
T ss_pred             CHHHHHHHHHhhccC--CEEEEEecCC
Confidence            432 2   2233333  3899887654

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.55  E-value=0.00011  Score=67.61  Aligned_cols=91  Identities=13%  Similarity=0.050  Sum_probs=57.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC------CeEEEEEcCc--cc-hhhhcCC--C-cEEeecCCCCHHHHHHHhcCCc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKR------TRIKALVKDK--RN-AMESFGT--Y-VESMAGDASNKKFLKTALRGVR  165 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g------~~V~~~~R~~--~~-~~~~~~~--~-v~~v~~D~~d~~~l~~~l~~~d  165 (294)
                      .+++|+|.||||.+|+++++.|++++      .+++++.+..  .+ .....+.  + .+....|+ +.+    .+.++|
T Consensus         8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~-~~~----~~~~~D   82 (352)
T 2nqt_A            8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPT-EAA----VLGGHD   82 (352)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEEC-CHH----HHTTCS
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccC-CHH----HhcCCC
Confidence            35799999999999999999999887      3778876432  22 2222211  1 01111222 222    356899


Q ss_pred             EEEEcCCc----hHHhhhhhcCCCEEEEeccccc
Q 022625          166 SIICPSEG----FISNAGSLKGVQHVILLSQLSV  195 (294)
Q Consensus       166 ~Vi~~~~~----~~~~~~~~~gv~r~V~vSs~~~  195 (294)
                      +||.+.+.    .+...+ +.|+ ++|-+|+..-
T Consensus        83 vVf~alg~~~s~~~~~~~-~~G~-~vIDlSa~~R  114 (352)
T 2nqt_A           83 AVFLALPHGHSAVLAQQL-SPET-LIIDCGADFR  114 (352)
T ss_dssp             EEEECCTTSCCHHHHHHS-CTTS-EEEECSSTTT
T ss_pred             EEEECCCCcchHHHHHHH-hCCC-EEEEECCCcc
Confidence            99998442    244555 6674 7888887653

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.53  E-value=0.00011  Score=67.33  Aligned_cols=95  Identities=16%  Similarity=0.103  Sum_probs=62.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHhc--CCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l~--~~d~Vi~~~  171 (294)
                      .++++|+|+||+|.||..+++.+...|++|++++|++++......-+... ..|..+.   +.+.+...  ++|+||++.
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~  247 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHE-VFNHREVNYIDKIKKYVGEKGIDIIIEML  247 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCE-EEeCCCchHHHHHHHHcCCCCcEEEEECC
Confidence            46789999999999999999999999999999999887654322212221 2355443   33444443  689999995


Q ss_pred             Cch-HHhhhhhc-CCCEEEEecc
Q 022625          172 EGF-ISNAGSLK-GVQHVILLSQ  192 (294)
Q Consensus       172 ~~~-~~~~~~~~-gv~r~V~vSs  192 (294)
                      ++. +..+.... .-.++|.++.
T Consensus       248 G~~~~~~~~~~l~~~G~iv~~g~  270 (351)
T 1yb5_A          248 ANVNLSKDLSLLSHGGRVIVVGS  270 (351)
T ss_dssp             HHHHHHHHHHHEEEEEEEEECCC
T ss_pred             ChHHHHHHHHhccCCCEEEEEec
Confidence            542 22221111 1247888874

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.50  E-value=0.00013  Score=66.82  Aligned_cols=95  Identities=17%  Similarity=0.152  Sum_probs=62.9

Q ss_pred             CCC--CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcC-CCcEEeecCCCCH---HHHHHHhc-CCcEEE
Q 022625           97 EAR--DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG-TYVESMAGDASNK---KFLKTALR-GVRSII  168 (294)
Q Consensus        97 ~~~--~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~---~~l~~~l~-~~d~Vi  168 (294)
                      .++  ++|+|+||+|.||..+++.+...|+ +|+++++++++...... -+... ..|..+.   +.+.+... ++|++|
T Consensus       157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~d~vi  235 (357)
T 2zb4_A          157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDA-AINYKKDNVAEQLRESCPAGVDVYF  235 (357)
T ss_dssp             CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSE-EEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred             CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCce-EEecCchHHHHHHHHhcCCCCCEEE
Confidence            356  8999999999999999999999999 99999998766443321 12221 2355443   23333332 589999


Q ss_pred             EcCCchHHh----hhhhcCCCEEEEecccc
Q 022625          169 CPSEGFISN----AGSLKGVQHVILLSQLS  194 (294)
Q Consensus       169 ~~~~~~~~~----~~~~~gv~r~V~vSs~~  194 (294)
                      ++.++...+    .++..  .++|.++...
T Consensus       236 ~~~G~~~~~~~~~~l~~~--G~iv~~G~~~  263 (357)
T 2zb4_A          236 DNVGGNISDTVISQMNEN--SHIILCGQIS  263 (357)
T ss_dssp             ESCCHHHHHHHHHTEEEE--EEEEECCCGG
T ss_pred             ECCCHHHHHHHHHHhccC--cEEEEECCcc
Confidence            996643222    22222  4888887654

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.49  E-value=7.4e-05  Score=68.02  Aligned_cols=95  Identities=13%  Similarity=0.088  Sum_probs=62.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-CCCcEEeecCCCCH----HHHHHHh-cCCcEEEEc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNK----KFLKTAL-RGVRSIICP  170 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~----~~l~~~l-~~~d~Vi~~  170 (294)
                      .++++|+|+||+|.||..+++.+...|++|++++|++++..... .-+... ..|+.+.    +.+.+.. .++|++|++
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~  232 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDD-AFNYKEESDLTAALKRCFPNGIDIYFEN  232 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSE-EEETTSCSCSHHHHHHHCTTCEEEEEES
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCce-EEecCCHHHHHHHHHHHhCCCCcEEEEC
Confidence            46789999999999999999999999999999999987654332 222222 2254432    3333332 368999999


Q ss_pred             CCchHH-h---hhhhcCCCEEEEecccc
Q 022625          171 SEGFIS-N---AGSLKGVQHVILLSQLS  194 (294)
Q Consensus       171 ~~~~~~-~---~~~~~gv~r~V~vSs~~  194 (294)
                      .++... .   .++..  .++|.++...
T Consensus       233 ~g~~~~~~~~~~l~~~--G~~v~~G~~~  258 (345)
T 2j3h_A          233 VGGKMLDAVLVNMNMH--GRIAVCGMIS  258 (345)
T ss_dssp             SCHHHHHHHHTTEEEE--EEEEECCCGG
T ss_pred             CCHHHHHHHHHHHhcC--CEEEEEcccc
Confidence            654322 2   22222  4788886543

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.44  E-value=0.00024  Score=64.32  Aligned_cols=75  Identities=9%  Similarity=0.080  Sum_probs=56.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcC---ccchhhhc---C--CCcEEeecCCCCHHHHHHHhcCCcE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAMESF---G--TYVESMAGDASNKKFLKTALRGVRS  166 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~---~~~~~~~~---~--~~v~~v~~D~~d~~~l~~~l~~~d~  166 (294)
                      ...+++++|+|| |++|+.++..|++.|. +|.++.|+   .+++.++.   .  ....+...++.+.+.+.+.+.++|+
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~Di  223 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADI  223 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceE
Confidence            356899999997 9999999999999998 89999999   55544321   1  1233344566665555677888999


Q ss_pred             EEEcC
Q 022625          167 IICPS  171 (294)
Q Consensus       167 Vi~~~  171 (294)
                      ||+++
T Consensus       224 IINaT  228 (312)
T 3t4e_A          224 LTNGT  228 (312)
T ss_dssp             EEECS
T ss_pred             EEECC
Confidence            99983

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.44  E-value=0.00054  Score=63.04  Aligned_cols=93  Identities=9%  Similarity=0.061  Sum_probs=66.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-CCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc--h
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGVRSIICPSEG--F  174 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~--~  174 (294)
                      ++.+|+|+|+ |.||...++.+...|++|+++++++++..... .-+.+. ..|..+.+.+.+...++|+||.+.++  .
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~-v~~~~~~~~~~~~~~~~D~vid~~g~~~~  264 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS-FLVSRDQEQMQAAAGTLDGIIDTVSAVHP  264 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSE-EEETTCHHHHHHTTTCEEEEEECCSSCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCce-EEeccCHHHHHHhhCCCCEEEECCCcHHH
Confidence            7889999996 99999999999999999999999887754422 222222 24666777777777789999998432  1


Q ss_pred             ---HHhhhhhcCCCEEEEecccc
Q 022625          175 ---ISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       175 ---~~~~~~~~gv~r~V~vSs~~  194 (294)
                         ..+.++..  .++|.+++..
T Consensus       265 ~~~~~~~l~~~--G~iv~~g~~~  285 (366)
T 1yqd_A          265 LLPLFGLLKSH--GKLILVGAPE  285 (366)
T ss_dssp             SHHHHHHEEEE--EEEEECCCCS
T ss_pred             HHHHHHHHhcC--CEEEEEccCC
Confidence               22233333  4788887643

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.42  E-value=0.00011  Score=67.33  Aligned_cols=95  Identities=15%  Similarity=0.072  Sum_probs=62.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHhc--CCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l~--~~d~Vi~~~  171 (294)
                      .++++|+|+||+|.||..+++.+...|++|++++|++++......-+.+. ..|..+.   +.+.+...  ++|++|++.
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  239 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAA-GFNYKKEDFSEATLKFTKGAGVNLILDCI  239 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcE-EEecCChHHHHHHHHHhcCCCceEEEECC
Confidence            46789999999999999999999999999999999887654331111221 2344443   34444443  689999995


Q ss_pred             Cch-HHh---hhhhcCCCEEEEecccc
Q 022625          172 EGF-ISN---AGSLKGVQHVILLSQLS  194 (294)
Q Consensus       172 ~~~-~~~---~~~~~gv~r~V~vSs~~  194 (294)
                      ++. +..   .++..  .++|.++...
T Consensus       240 G~~~~~~~~~~l~~~--G~iv~~G~~~  264 (354)
T 2j8z_A          240 GGSYWEKNVNCLALD--GRWVLYGLMG  264 (354)
T ss_dssp             CGGGHHHHHHHEEEE--EEEEECCCTT
T ss_pred             CchHHHHHHHhccCC--CEEEEEeccC
Confidence            543 222   22222  4788887543

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.39  E-value=0.001  Score=58.06  Aligned_cols=93  Identities=9%  Similarity=0.032  Sum_probs=65.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCc-------------------cchhhh------cCC--CcEEe
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAMES------FGT--YVESM  147 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~-------------------~~~~~~------~~~--~v~~v  147 (294)
                      .+.+++|+|.|+ |++|+++++.|+..|. ++++++++.                   .++...      ..+  .++.+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            445789999997 8999999999999997 888888876                   332211      122  34455


Q ss_pred             ecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEec
Q 022625          148 AGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLS  191 (294)
Q Consensus       148 ~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vS  191 (294)
                      ..+++ .+.+.+.++++|+||.+.+.+     +.+.+.+.++. +|..+
T Consensus       107 ~~~~~-~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p-~i~~~  153 (249)
T 1jw9_B          107 NALLD-DAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVP-LVSGA  153 (249)
T ss_dssp             CSCCC-HHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCC-EEEEE
T ss_pred             eccCC-HhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCC-EEEee
Confidence            55665 456778889999999996543     45566677754 44443

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.39  E-value=0.00019  Score=66.08  Aligned_cols=96  Identities=16%  Similarity=0.117  Sum_probs=62.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCC--H-HHHHHHh-cCCcEEEEcCC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--K-KFLKTAL-RGVRSIICPSE  172 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d--~-~~l~~~l-~~~d~Vi~~~~  172 (294)
                      .++++|+|+||+|.||..+++.+...|++|+++++++++......-+.+.+ .|..+  . +.+.+.. .++|+||.+.+
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~~~~~~~~g~D~vid~~g  240 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRP-INYKTEPVGTVLKQEYPEGVDVVYESVG  240 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHCTTCEEEEEECSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEE-EecCChhHHHHHHHhcCCCCCEEEECCC
Confidence            467899999999999999999999999999999998776443322222221 23332  2 2333322 36899999955


Q ss_pred             chHH----hhhhhcCCCEEEEeccccc
Q 022625          173 GFIS----NAGSLKGVQHVILLSQLSV  195 (294)
Q Consensus       173 ~~~~----~~~~~~gv~r~V~vSs~~~  195 (294)
                      +...    ++++..  .++|.+++...
T Consensus       241 ~~~~~~~~~~l~~~--G~iv~~g~~~~  265 (362)
T 2c0c_A          241 GAMFDLAVDALATK--GRLIVIGFISG  265 (362)
T ss_dssp             THHHHHHHHHEEEE--EEEEECCCGGG
T ss_pred             HHHHHHHHHHHhcC--CEEEEEeCCCC
Confidence            4322    222333  48999887543

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.38  E-value=0.00089  Score=63.80  Aligned_cols=92  Identities=16%  Similarity=0.251  Sum_probs=72.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHH-hcCCcEEEEcCCch
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF  174 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~~~  174 (294)
                      .-++|+|.|| |.||..+++.|- .+++|.++-++++++.....  ++..++.+|.+|.+-+++. ++.+|+++.++..-
T Consensus       234 ~~~~v~I~Gg-G~ig~~lA~~L~-~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~D  311 (461)
T 4g65_A          234 PYRRIMIVGG-GNIGASLAKRLE-QTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALTNED  311 (461)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECCSCH
T ss_pred             cccEEEEEcc-hHHHHHHHHHhh-hcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEcccCc
Confidence            4579999997 899999999975 56999999999987654322  4688999999999988764 78899999985532


Q ss_pred             -----HHhhhhhcCCCEEEEec
Q 022625          175 -----ISNAGSLKGVQHVILLS  191 (294)
Q Consensus       175 -----~~~~~~~~gv~r~V~vS  191 (294)
                           ..-.|++.|++++|-.-
T Consensus       312 e~Ni~~~llAk~~gv~kvIa~v  333 (461)
T 4g65_A          312 ETNIMSAMLAKRMGAKKVMVLI  333 (461)
T ss_dssp             HHHHHHHHHHHHTTCSEEEEEC
T ss_pred             HHHHHHHHHHHHcCCccccccc
Confidence                 33357888999887653

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.37  E-value=0.0002  Score=65.62  Aligned_cols=98  Identities=13%  Similarity=0.066  Sum_probs=62.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHh-cCCcEEEEcC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPS  171 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l-~~~d~Vi~~~  171 (294)
                      ..++++|+|+||+|.||..+++.+...|++|+++++++++......-+... ..|..+.   +.+.+.. .++|++|.+.
T Consensus       165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~~  243 (353)
T 4dup_A          165 LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKR-GINYRSEDFAAVIKAETGQGVDIILDMI  243 (353)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCE-EEeCCchHHHHHHHHHhCCCceEEEECC
Confidence            346789999999999999999999999999999999987754332111221 1233332   3333333 3689999995


Q ss_pred             Cch-HHhhhhhc-CCCEEEEecccc
Q 022625          172 EGF-ISNAGSLK-GVQHVILLSQLS  194 (294)
Q Consensus       172 ~~~-~~~~~~~~-gv~r~V~vSs~~  194 (294)
                      ++. +..+.... .-.++|.++...
T Consensus       244 g~~~~~~~~~~l~~~G~iv~~g~~~  268 (353)
T 4dup_A          244 GAAYFERNIASLAKDGCLSIIAFLG  268 (353)
T ss_dssp             CGGGHHHHHHTEEEEEEEEECCCTT
T ss_pred             CHHHHHHHHHHhccCCEEEEEEecC
Confidence            543 22221111 124788887543

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.37  E-value=0.00033  Score=59.68  Aligned_cols=64  Identities=11%  Similarity=0.151  Sum_probs=50.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      +++|.|.| +|.+|+.+++.|.+.|++|+++.|++++.......+++..        ++.++++++|+||.+.
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~--------~~~~~~~~~DvVi~av   91 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT--------FQEEAVSSPEVIFVAV   91 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE--------EHHHHTTSCSEEEECS
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee--------cHHHHHhCCCEEEECC
Confidence            57899999 6999999999999999999999999877655433344432        2456678999999983

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.37  E-value=0.00016  Score=66.67  Aligned_cols=70  Identities=16%  Similarity=0.122  Sum_probs=54.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---CCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+++|+|+|+ |.+|+.+++.|...|++|+++.|+++++....   ...+..+   ..+.+.+.+.+.++|+||++
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~DvVI~~  237 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGA  237 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEee---eCCHHHHHHHHcCCCEEEEC
Confidence            44589999999 99999999999999999999999987754432   2222221   23456677788899999998

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.35  E-value=8.3e-05  Score=65.85  Aligned_cols=71  Identities=14%  Similarity=0.042  Sum_probs=49.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---CCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ...+++++|+|+ |++|+.++..|++.|++|+++.|+.+++.+..   +..-.+...|+   +.+.+  .++|+||++++
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~~~--~~~DivVn~t~  189 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM---DELEG--HEFDLIINATS  189 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS---GGGTT--CCCSEEEECCS
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH---HHhcc--CCCCEEEECCC
Confidence            346799999998 88999999999999999999999987654332   11001212333   22222  58899999944

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.33  E-value=0.0003  Score=62.81  Aligned_cols=72  Identities=13%  Similarity=0.213  Sum_probs=54.0

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhc---C---CCcEEeecCCCCHHHHHHHhcCCcEEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF---G---TYVESMAGDASNKKFLKTALRGVRSII  168 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~---~---~~v~~v~~D~~d~~~l~~~l~~~d~Vi  168 (294)
                      ...+++++|+|+ |++|+.++..|++.|. +|+++.|+.+++.+..   .   ..+.+...++.+   +.+.+.++|+||
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~~~DiVI  199 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIAAADGVV  199 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHHHSSEEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHhcCCEEE
Confidence            346799999998 8999999999999998 7999999988765431   1   123333444433   456678899999


Q ss_pred             EcC
Q 022625          169 CPS  171 (294)
Q Consensus       169 ~~~  171 (294)
                      +++
T Consensus       200 naT  202 (283)
T 3jyo_A          200 NAT  202 (283)
T ss_dssp             ECS
T ss_pred             ECC
Confidence            984

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.33  E-value=0.00023  Score=63.56  Aligned_cols=95  Identities=11%  Similarity=0.092  Sum_probs=61.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCch-
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-  174 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-  174 (294)
                      ..++++|+|+||+|.+|..+++.+...|++|+++++++++......-+.+.+ .|..+.+.+.+.+.++|+||. .++. 
T Consensus       123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~-~~~~~~~~~~~~~~~~d~vid-~g~~~  200 (302)
T 1iz0_A          123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEA-ATYAEVPERAKAWGGLDLVLE-VRGKE  200 (302)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEE-EEGGGHHHHHHHTTSEEEEEE-CSCTT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEE-EECCcchhHHHHhcCceEEEE-CCHHH
Confidence            3468899999999999999999999999999999998877543322222222 355441334444588999999 6643 


Q ss_pred             HHh---hhhhcCCCEEEEecccc
Q 022625          175 ISN---AGSLKGVQHVILLSQLS  194 (294)
Q Consensus       175 ~~~---~~~~~gv~r~V~vSs~~  194 (294)
                      +..   .++..  .++|.++...
T Consensus       201 ~~~~~~~l~~~--G~~v~~g~~~  221 (302)
T 1iz0_A          201 VEESLGLLAHG--GRLVYIGAAE  221 (302)
T ss_dssp             HHHHHTTEEEE--EEEEEC----
T ss_pred             HHHHHHhhccC--CEEEEEeCCC
Confidence            222   22222  4788876543

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.31  E-value=0.00056  Score=62.65  Aligned_cols=88  Identities=18%  Similarity=0.167  Sum_probs=54.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEEc--CccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVK--DKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~R--~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~  173 (294)
                      +++|+|.||+|.||+++++.|.++++   +++++..  +..+... +. +.++...|. +.+    .+.++|+||.+.+.
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~-~~-g~~i~~~~~-~~~----~~~~~DvV~~a~g~   78 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FA-ESSLRVGDV-DSF----DFSSVGLAFFAAAA   78 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ET-TEEEECEEG-GGC----CGGGCSEEEECSCH
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc-cC-CcceEEecC-CHH----HhcCCCEEEEcCCc
Confidence            36899999999999999999997654   5566542  2222111 11 111111122 111    25689999999664


Q ss_pred             h----HHhhhhhcCCCEEEEecccc
Q 022625          174 F----ISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       174 ~----~~~~~~~~gv~r~V~vSs~~  194 (294)
                      .    ++..+.+.|++ +|.+|+..
T Consensus        79 ~~s~~~a~~~~~aG~k-vId~Sa~~  102 (340)
T 2hjs_A           79 EVSRAHAERARAAGCS-VIDLSGAL  102 (340)
T ss_dssp             HHHHHHHHHHHHTTCE-EEETTCTT
T ss_pred             HHHHHHHHHHHHCCCE-EEEeCCCC
Confidence            4    34445667875 77777754

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.30  E-value=0.00028  Score=62.84  Aligned_cols=68  Identities=9%  Similarity=0.012  Sum_probs=54.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+++++|+|+ |++|+.++..|.+.|+ +|+++.|+.+++.+... .+..+     ..+++.+.+.++|+||+++
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~~~~-----~~~~~~~~~~~aDiVInaT  183 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NINKI-----NLSHAESHLDEFDIIINTT  183 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CCEEE-----CHHHHHHTGGGCSEEEECC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hcccc-----cHhhHHHHhcCCCEEEECc
Confidence            45799999997 8999999999999998 99999999988765432 22221     3456677788999999984

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.30  E-value=0.00022  Score=64.42  Aligned_cols=98  Identities=9%  Similarity=-0.049  Sum_probs=63.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCC---HHHHHHHhc--CCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTALR--GVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d---~~~l~~~l~--~~d~Vi~~  170 (294)
                      ..++++|+|+||+|.||...++.+...|++|+++++++++......-+... ..|..+   .+.+.+...  ++|+||.+
T Consensus       138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvid~  216 (325)
T 3jyn_A          138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWE-TIDYSHEDVAKRVLELTDGKKCPVVYDG  216 (325)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE-EEeCCCccHHHHHHHHhCCCCceEEEEC
Confidence            346889999999999999999999999999999999887654332111211 123333   244444443  68999998


Q ss_pred             CCch-HHhhhhhc-CCCEEEEecccc
Q 022625          171 SEGF-ISNAGSLK-GVQHVILLSQLS  194 (294)
Q Consensus       171 ~~~~-~~~~~~~~-gv~r~V~vSs~~  194 (294)
                      .++. +..+.... .-.++|.++...
T Consensus       217 ~g~~~~~~~~~~l~~~G~iv~~g~~~  242 (325)
T 3jyn_A          217 VGQDTWLTSLDSVAPRGLVVSFGNAS  242 (325)
T ss_dssp             SCGGGHHHHHTTEEEEEEEEECCCTT
T ss_pred             CChHHHHHHHHHhcCCCEEEEEecCC
Confidence            5543 22221111 125788887644

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.28  E-value=0.00048  Score=62.36  Aligned_cols=96  Identities=16%  Similarity=0.045  Sum_probs=63.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCC---HHHHHHHh--cCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTAL--RGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d---~~~l~~~l--~~~d~Vi~~  170 (294)
                      ..++++|+|+||+|.||...++.+...|++|+++++++++......-+.+. ..|..+   .+.+.+..  .++|+||.+
T Consensus       146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~~~~~~~~~~~~~~~~~~~g~D~vid~  224 (334)
T 3qwb_A          146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEY-LINASKEDILRQVLKFTNGKGVDASFDS  224 (334)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcE-EEeCCCchHHHHHHHHhCCCCceEEEEC
Confidence            346789999999999999999999999999999999887654332212221 123333   24444444  368999999


Q ss_pred             CCch-HH---hhhhhcCCCEEEEecccc
Q 022625          171 SEGF-IS---NAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       171 ~~~~-~~---~~~~~~gv~r~V~vSs~~  194 (294)
                      .++. +.   +.++..  .++|.++...
T Consensus       225 ~g~~~~~~~~~~l~~~--G~iv~~G~~~  250 (334)
T 3qwb_A          225 VGKDTFEISLAALKRK--GVFVSFGNAS  250 (334)
T ss_dssp             CGGGGHHHHHHHEEEE--EEEEECCCTT
T ss_pred             CChHHHHHHHHHhccC--CEEEEEcCCC
Confidence            5543 22   222222  4788887543

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.25  E-value=0.0003  Score=63.15  Aligned_cols=70  Identities=16%  Similarity=0.069  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhc---CCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+++++|+|+ |++|+.++..|++.|+ +|+++.|+.+++.+..   +....    ++.+.+.+.+.+.++|+||+++
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~~~~~~~aDivIn~t  212 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS----AYFSLAEAETRLAEYDIIINTT  212 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHHHHTGGGCSEEEECS
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHHHhhhccCCEEEECC
Confidence            46799999997 8999999999999998 9999999987765432   21110    2223456777888999999983

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.22  E-value=0.00051  Score=62.41  Aligned_cols=93  Identities=10%  Similarity=0.071  Sum_probs=62.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHhcCCcEEEEcCCc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALRGVRSIICPSEG  173 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l~~~d~Vi~~~~~  173 (294)
                      .++++|+|+|| |.+|..+++.+...|++|++++|++++......-+.+. ..|..+.   +.+.+...++|+||.+.++
T Consensus       163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~~d~~~~~~~~~~~~~~~~~d~vid~~g~  240 (339)
T 1rjw_A          163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADL-VVNPLKEDAAKFMKEKVGGVHAAVVTAVS  240 (339)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSE-EECTTTSCHHHHHHHHHSSEEEEEESSCC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCE-EecCCCccHHHHHHHHhCCCCEEEECCCC
Confidence            46789999999 77999999999999999999999887654332222322 2355432   3344444689999999553


Q ss_pred             --hHHh---hhhhcCCCEEEEeccc
Q 022625          174 --FISN---AGSLKGVQHVILLSQL  193 (294)
Q Consensus       174 --~~~~---~~~~~gv~r~V~vSs~  193 (294)
                        .+..   .++..  .++|.++..
T Consensus       241 ~~~~~~~~~~l~~~--G~~v~~g~~  263 (339)
T 1rjw_A          241 KPAFQSAYNSIRRG--GACVLVGLP  263 (339)
T ss_dssp             HHHHHHHHHHEEEE--EEEEECCCC
T ss_pred             HHHHHHHHHHhhcC--CEEEEeccc
Confidence              2222   22333  478888764

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.19  E-value=0.0021  Score=57.52  Aligned_cols=94  Identities=13%  Similarity=0.098  Sum_probs=65.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCc------------------cchhh------hcCC--CcEEe
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK------------------RNAME------SFGT--YVESM  147 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~------------------~~~~~------~~~~--~v~~v  147 (294)
                      ..+...+|+|.|+ |++|+++++.|+..|. ++++++++.                  .|+..      ..++  .++.+
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~  110 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH  110 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence            3556789999998 8999999999999996 777776654                  12111      1223  45566


Q ss_pred             ecCCCCHHHHHHHh-----------cCCcEEEEcCCch-----HHhhhhhcCCCEEEEe
Q 022625          148 AGDASNKKFLKTAL-----------RGVRSIICPSEGF-----ISNAGSLKGVQHVILL  190 (294)
Q Consensus       148 ~~D~~d~~~l~~~l-----------~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~v  190 (294)
                      ..++++.+.+.+++           +++|+||.+.+.+     +.++|.+.++. +|+.
T Consensus       111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~P-li~~  168 (292)
T 3h8v_A          111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQT-WMES  168 (292)
T ss_dssp             CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCC-EEEE
T ss_pred             cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCC-EEEe
Confidence            67787766666655           6899999996654     55667777764 4443

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.15  E-value=0.00037  Score=64.66  Aligned_cols=71  Identities=13%  Similarity=0.022  Sum_probs=55.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ...+++|+|+|+ |.||+.+++.+...|++|++++|+++++...   ++..+.   .+..+...+.+.++++|+||.+
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~---~~~~~~~~l~~~l~~aDvVi~~  238 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIH---TRYSSAYELEGAVKRADLVIGA  238 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSE---EEECCHHHHHHHHHHCSEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeE---eccCCHHHHHHHHcCCCEEEEC
Confidence            356899999998 9999999999999999999999998764432   332221   2334566788888899999997

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.15  E-value=0.00076  Score=61.86  Aligned_cols=89  Identities=7%  Similarity=-0.088  Sum_probs=55.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccch---hhhcCC--CcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNA---MESFGT--YVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~---~~~~~~--~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      +++|.|.||+|.||+++++.|.++.. +++++.+..+..   .+.++.  +..  ...+.+.+   + +.++|+||.+.+
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~--~~~~~~~~---~-~~~vDvV~~a~g   77 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRT--NLKFVPPE---K-LEPADILVLALP   77 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTC--CCBCBCGG---G-CCCCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcc--cccccchh---H-hcCCCEEEEcCC
Confidence            47899999999999999999997754 888877643321   111110  000  11122322   2 478999999965


Q ss_pred             ch----HHhhhhhcCCCEEEEecccc
Q 022625          173 GF----ISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       173 ~~----~~~~~~~~gv~r~V~vSs~~  194 (294)
                      ..    ++..+.+.|+ ++|-+|+..
T Consensus        78 ~~~s~~~a~~~~~aG~-~VId~Sa~~  102 (345)
T 2ozp_A           78 HGVFAREFDRYSALAP-VLVDLSADF  102 (345)
T ss_dssp             TTHHHHTHHHHHTTCS-EEEECSSTT
T ss_pred             cHHHHHHHHHHHHCCC-EEEEcCccc
Confidence            43    2334456676 588888753

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.13  E-value=0.00057  Score=62.28  Aligned_cols=93  Identities=14%  Similarity=0.053  Sum_probs=61.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHhc--CCcEEEEcC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPS  171 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l~--~~d~Vi~~~  171 (294)
                      ++.+|+|+|| |.+|...++.+...|+ +|+++++++++......-+.+.+ .|..+.   +.+.+...  ++|+||.+.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~v~~~~~g~g~D~vid~~  244 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYV-INPFEEDVVKEVMDITDGNGVDVFLEFS  244 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEE-ECTTTSCHHHHHHHHTTTSCEEEEEECS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE-ECCCCcCHHHHHHHHcCCCCCCEEEECC
Confidence            6889999999 9999999999999999 99999998876543221122221 244332   33444433  689999995


Q ss_pred             Cc--hHHh---hhhhcCCCEEEEecccc
Q 022625          172 EG--FISN---AGSLKGVQHVILLSQLS  194 (294)
Q Consensus       172 ~~--~~~~---~~~~~gv~r~V~vSs~~  194 (294)
                      ++  .+..   .++..  .++|.+++..
T Consensus       245 g~~~~~~~~~~~l~~~--G~iv~~g~~~  270 (348)
T 2d8a_A          245 GAPKALEQGLQAVTPA--GRVSLLGLYP  270 (348)
T ss_dssp             CCHHHHHHHHHHEEEE--EEEEECCCCS
T ss_pred             CCHHHHHHHHHHHhcC--CEEEEEccCC
Confidence            43  2222   22333  4888887643

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.11  E-value=0.0011  Score=60.44  Aligned_cols=88  Identities=14%  Similarity=0.109  Sum_probs=55.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEEc--CccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVK--DKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~R--~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~  173 (294)
                      +++|.|.||+|.||+++++.|.+++   .+++++..  +..+.....+..+.+  .|+ +++    .+.++|+||.+.+.
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~--~~~-~~~----~~~~vDvVf~a~g~   75 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRV--QNV-EEF----DWSQVHIALFSAGG   75 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEE--EEG-GGC----CGGGCSEEEECSCH
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEE--ecC-ChH----HhcCCCEEEECCCc
Confidence            5789999999999999999999874   47777763  222211111112222  222 111    34689999999665


Q ss_pred             h----HHhhhhhcCCCEEEEecccc
Q 022625          174 F----ISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       174 ~----~~~~~~~~gv~r~V~vSs~~  194 (294)
                      +    .+..+.+.|+ ++|-.|+..
T Consensus        76 ~~s~~~a~~~~~~G~-~vId~s~~~   99 (336)
T 2r00_A           76 ELSAKWAPIAAEAGV-VVIDNTSHF   99 (336)
T ss_dssp             HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             hHHHHHHHHHHHcCC-EEEEcCCcc
Confidence            4    3344556776 577777763

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.10  E-value=8.3e-05  Score=59.13  Aligned_cols=67  Identities=6%  Similarity=0.083  Sum_probs=50.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCC-CcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      +++|+|.|+ |.+|+.+++.|...|++|+++.|+++++...... +....  ...+   +.+.++++|+||.++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~--~~~~---~~~~~~~~Divi~at   88 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYV--LIND---IDSLIKNNDVIITAT   88 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEE--ECSC---HHHHHHTCSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceE--eecC---HHHHhcCCCEEEEeC
Confidence            789999997 9999999999999999999999998875442110 12222  2233   456678999999983

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.08  E-value=0.0016  Score=61.18  Aligned_cols=73  Identities=10%  Similarity=0.058  Sum_probs=58.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      .+++++|+|.|+ |.+|+.+++.+.+.|++|++++.++........  -+.+..|+.|.+.+.++.+++|+|+.-.
T Consensus        32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~a--d~~~~~~~~d~~~l~~~a~~~D~V~~~~  104 (419)
T 4e4t_A           32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVA--DRHLRAAYDDEAALAELAGLCEAVSTEF  104 (419)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHS--SEEECCCTTCHHHHHHHHHHCSEEEECC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhhhC--CEEEECCcCCHHHHHHHHhcCCEEEEcc
Confidence            557899999997 899999999999999999998766543222222  2466789999999999999999999653

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.05  E-value=0.0011  Score=59.16  Aligned_cols=71  Identities=14%  Similarity=0.028  Sum_probs=53.9

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+.+++|+|.|+ |.||+.+++.|...|++|++..|++++.......+++.+     +.+.+.++++++|+|+.+.
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDvVi~~~  221 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPF-----HISKAAQELRDVDVCINTI  221 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEE-----EGGGHHHHTTTCSEEEECC
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeec-----ChhhHHHHhcCCCEEEECC
Confidence            3567899999996 999999999999999999999998866433221233332     1234677889999999883

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.04  E-value=0.0015  Score=59.40  Aligned_cols=96  Identities=16%  Similarity=0.143  Sum_probs=60.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCc-EEeecCCCC-HHHHHHHhc--CCcEEEEcC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASN-KKFLKTALR--GVRSIICPS  171 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v-~~v~~D~~d-~~~l~~~l~--~~d~Vi~~~  171 (294)
                      ..++++|+|+||+|.||...++.+...|++|+++++++++......-+. .++..+ .+ .+.+.+...  ++|+||.+.
T Consensus       157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~  235 (342)
T 4eye_A          157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPI  235 (342)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECC
Confidence            3468899999999999999999999999999999998877543221112 222233 23 234455443  589999985


Q ss_pred             Cch-HHh---hhhhcCCCEEEEecccc
Q 022625          172 EGF-ISN---AGSLKGVQHVILLSQLS  194 (294)
Q Consensus       172 ~~~-~~~---~~~~~gv~r~V~vSs~~  194 (294)
                      ++- +..   .++..  .++|.++...
T Consensus       236 g~~~~~~~~~~l~~~--G~iv~~G~~~  260 (342)
T 4eye_A          236 GGPAFDDAVRTLASE--GRLLVVGFAA  260 (342)
T ss_dssp             C--CHHHHHHTEEEE--EEEEEC----
T ss_pred             chhHHHHHHHhhcCC--CEEEEEEccC
Confidence            432 222   22222  4788886543

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=97.03  E-value=0.0023  Score=62.20  Aligned_cols=84  Identities=14%  Similarity=0.153  Sum_probs=66.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH-hcCCcEEEEcCCch----
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF----  174 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~~~----  174 (294)
                      ++++|.|+ |.+|+.+++.|.+.|++|+++.+++++..+.    ..++.+|.+|.+.++++ ++.+|++|.+.+..    
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~----~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~~ni  423 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCND----HVVVYGDATVGQTLRQAGIDRASGIIVTTNDDSTNI  423 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCS----SCEEESCSSSSTHHHHHTTTSCSEEEECCSCHHHHH
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhc----CCEEEeCCCCHHHHHhcCccccCEEEEECCCchHHH
Confidence            88999998 9999999999999999999999999876543    27899999999888765 67889999985432    


Q ss_pred             -HHhhhhhcCCC-EEE
Q 022625          175 -ISNAGSLKGVQ-HVI  188 (294)
Q Consensus       175 -~~~~~~~~gv~-r~V  188 (294)
                       ..-.+++.+++ ++|
T Consensus       424 ~~~~~ak~l~~~~~ii  439 (565)
T 4gx0_A          424 FLTLACRHLHSHIRIV  439 (565)
T ss_dssp             HHHHHHHHHCSSSEEE
T ss_pred             HHHHHHHHHCCCCEEE
Confidence             22345566655 444

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.01  E-value=0.0012  Score=59.20  Aligned_cols=72  Identities=10%  Similarity=0.009  Sum_probs=54.5

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ..+.+++|+|.|+ |.||+.+++.|...|++|++..|++++.......+++.+.     ..++.++++++|+|+.+.+
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~-----~~~l~~~l~~aDvVi~~~p  224 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFH-----TDELKEHVKDIDICINTIP  224 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEE-----GGGHHHHSTTCSEEEECCS
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEc-----hhhHHHHhhCCCEEEECCC
Confidence            4567899999997 9999999999999999999999988764432212333321     2346778899999998833

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.01  E-value=0.0017  Score=59.11  Aligned_cols=94  Identities=12%  Similarity=0.119  Sum_probs=61.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHh--cCCcEEEEc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICP  170 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l--~~~d~Vi~~  170 (294)
                      .++++|+|+||+|.||..+++.+... |++|+++++++++......-+.+. ..|..+.   +.+.+..  .++|++|++
T Consensus       169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~  247 (347)
T 1jvb_A          169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADY-VINASMQDPLAEIRRITESKGVDAVIDL  247 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCE-EecCCCccHHHHHHHHhcCCCceEEEEC
Confidence            36789999999989999999999998 999999999887644322111211 1244332   3355555  368999999


Q ss_pred             CCch--HHhh---hhhcCCCEEEEeccc
Q 022625          171 SEGF--ISNA---GSLKGVQHVILLSQL  193 (294)
Q Consensus       171 ~~~~--~~~~---~~~~gv~r~V~vSs~  193 (294)
                      .++.  +..+   ++..  .++|.++..
T Consensus       248 ~g~~~~~~~~~~~l~~~--G~iv~~g~~  273 (347)
T 1jvb_A          248 NNSEKTLSVYPKALAKQ--GKYVMVGLF  273 (347)
T ss_dssp             CCCHHHHTTGGGGEEEE--EEEEECCSS
T ss_pred             CCCHHHHHHHHHHHhcC--CEEEEECCC
Confidence            5532  2222   2222  478888754

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.00  E-value=0.00055  Score=62.17  Aligned_cols=96  Identities=18%  Similarity=0.149  Sum_probs=62.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCC---HHHHHHHhc--CCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTALR--GVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d---~~~l~~~l~--~~d~Vi~~  170 (294)
                      ..++++|+|+||+|.||...++.+...|++|+++++++++......-+.+.+ .|..+   .+.+.+...  ++|+||.+
T Consensus       142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~  220 (340)
T 3gms_A          142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYV-IDTSTAPLYETVMELTNGIGADAAIDS  220 (340)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEE-EeCCcccHHHHHHHHhCCCCCcEEEEC
Confidence            3467899999999999999999888899999999998876543322122211 23333   234444443  68999999


Q ss_pred             CCch-HH---hhhhhcCCCEEEEecccc
Q 022625          171 SEGF-IS---NAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       171 ~~~~-~~---~~~~~~gv~r~V~vSs~~  194 (294)
                      .++. ..   +.++..  .++|.++...
T Consensus       221 ~g~~~~~~~~~~l~~~--G~iv~~G~~~  246 (340)
T 3gms_A          221 IGGPDGNELAFSLRPN--GHFLTIGLLS  246 (340)
T ss_dssp             SCHHHHHHHHHTEEEE--EEEEECCCTT
T ss_pred             CCChhHHHHHHHhcCC--CEEEEEeecC
Confidence            5543 22   222222  5788887643

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.00  E-value=0.0007  Score=59.98  Aligned_cols=65  Identities=6%  Similarity=0.045  Sum_probs=49.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      +++|.|.|++|.+|..+++.|.+.|++|+++.|++++.......++.     ..+   ..+.++++|+||.+.
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~-----~~~---~~~~~~~aDvVi~av   75 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIP-----LTD---GDGWIDEADVVVLAL   75 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCC-----CCC---SSGGGGTCSEEEECS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCC-----cCC---HHHHhcCCCEEEEcC
Confidence            47999999999999999999999999999999988765443222222     122   234567889999883

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.99  E-value=0.0021  Score=58.57  Aligned_cols=96  Identities=14%  Similarity=0.071  Sum_probs=62.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHh--cCCcEEEEcCCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPSEG  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l--~~~d~Vi~~~~~  173 (294)
                      +++|+|+||+|.||...++.+...|++|+++++++++......-+... ..|..+.   +.+.+..  .++|+||.+.++
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~  243 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAH-VLNEKAPDFEATLREVMKAEQPRIFLDAVTG  243 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSE-EEETTSTTHHHHHHHHHHHHCCCEEEESSCH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE-EEECCcHHHHHHHHHHhcCCCCcEEEECCCC
Confidence            379999999999999999999899999999999887754332112221 1233332   3344444  379999999654


Q ss_pred             hH-Hhhhhh-cCCCEEEEeccccc
Q 022625          174 FI-SNAGSL-KGVQHVILLSQLSV  195 (294)
Q Consensus       174 ~~-~~~~~~-~gv~r~V~vSs~~~  195 (294)
                      .. ..+... ..-.++|.++....
T Consensus       244 ~~~~~~~~~l~~~G~iv~~G~~~~  267 (349)
T 3pi7_A          244 PLASAIFNAMPKRARWIIYGRLDP  267 (349)
T ss_dssp             HHHHHHHHHSCTTCEEEECCCSCC
T ss_pred             hhHHHHHhhhcCCCEEEEEeccCC
Confidence            32 222111 12358998876543

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=96.97  E-value=0.00067  Score=62.56  Aligned_cols=90  Identities=11%  Similarity=0.079  Sum_probs=56.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccch---hhhcC--CCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA---MESFG--TYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~---~~~~~--~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      +++|.|.||+|.+|+++++.|.++. .+++++.+..+..   .+.++  .+..  ..|+.-.+  .+.++++|+||.+.+
T Consensus        16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v--~~dl~~~~--~~~~~~vDvVf~atp   91 (359)
T 1xyg_A           16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK--LPTLVSVK--DADFSTVDAVFCCLP   91 (359)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSC--CCCCBCGG--GCCGGGCSEEEECCC
T ss_pred             CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcc--cccceecc--hhHhcCCCEEEEcCC
Confidence            4689999999999999999999876 4888887643221   11111  0110  13432222  335578999999954


Q ss_pred             ch----HHhhhhhcCCCEEEEecccc
Q 022625          173 GF----ISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       173 ~~----~~~~~~~~gv~r~V~vSs~~  194 (294)
                      ..    .+..+ +.|+ ++|-.|+..
T Consensus        92 ~~~s~~~a~~~-~aG~-~VId~sa~~  115 (359)
T 1xyg_A           92 HGTTQEIIKEL-PTAL-KIVDLSADF  115 (359)
T ss_dssp             TTTHHHHHHTS-CTTC-EEEECSSTT
T ss_pred             chhHHHHHHHH-hCCC-EEEECCccc
Confidence            32    33445 5665 578888754

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.96  E-value=0.0042  Score=57.30  Aligned_cols=73  Identities=12%  Similarity=0.092  Sum_probs=58.5

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ...++++|+|.|+ |.+|+.+++.+.+.|++|++++.++........  -+++..|+.|.+.+.++.+.+|+|..-
T Consensus         8 ~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~a--d~~~~~~~~d~~~l~~~~~~~dvi~~~   80 (377)
T 3orq_A            8 KLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVA--HEFIQAKYDDEKALNQLGQKCDVITYE   80 (377)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGS--SEEEECCTTCHHHHHHHHHHCSEEEES
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhhC--CEEEECCCCCHHHHHHHHHhCCcceec
Confidence            3457899999997 899999999999999999999876653222222  256778999999999999999988763

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.95  E-value=0.0023  Score=58.21  Aligned_cols=97  Identities=12%  Similarity=0.122  Sum_probs=61.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCC-HHHHHHHhc--CCcEEEEcCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALR--GVRSIICPSE  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d-~~~l~~~l~--~~d~Vi~~~~  172 (294)
                      ..++++|||+||+|.||...++.+...|++|+++ +++++......-+...+. +-.+ .+.+.+...  ++|+||.+.+
T Consensus       148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~~g  225 (343)
T 3gaz_A          148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGFDLVYDTLG  225 (343)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEEEEEESSC
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCceEEEECCC
Confidence            3467899999999999999999999999999998 776664432222333333 2223 234444443  6899999955


Q ss_pred             chHH-hhhhhc-CCCEEEEecccc
Q 022625          173 GFIS-NAGSLK-GVQHVILLSQLS  194 (294)
Q Consensus       173 ~~~~-~~~~~~-gv~r~V~vSs~~  194 (294)
                      +... .+.... .-.++|.++...
T Consensus       226 ~~~~~~~~~~l~~~G~iv~~g~~~  249 (343)
T 3gaz_A          226 GPVLDASFSAVKRFGHVVSCLGWG  249 (343)
T ss_dssp             THHHHHHHHHEEEEEEEEESCCCS
T ss_pred             cHHHHHHHHHHhcCCeEEEEcccC
Confidence            4322 221111 125788776543

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=96.94  E-value=0.0004  Score=61.86  Aligned_cols=72  Identities=7%  Similarity=-0.069  Sum_probs=47.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEee--------cCCCCHHHHHHHhcCCcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMA--------GDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~--------~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      +|+|.|.|+ |.+|..++..|++.|++|+++.|++++.......++....        .+..+.+.+.+.++++|+||.+
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~   81 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL   81 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence            479999997 9999999999999999999999988765443222222211        1222322222334478888887


Q ss_pred             C
Q 022625          171 S  171 (294)
Q Consensus       171 ~  171 (294)
                      .
T Consensus        82 v   82 (316)
T 2ew2_A           82 T   82 (316)
T ss_dssp             S
T ss_pred             e
Confidence            3

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.93  E-value=0.0036  Score=57.57  Aligned_cols=95  Identities=9%  Similarity=-0.013  Sum_probs=58.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHh--cCCcEEEEcCCch
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--RGVRSIICPSEGF  174 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l--~~~d~Vi~~~~~~  174 (294)
                      .++++|+|+||+|.||...++.+...|.+|+++++ +++......-+.+.+ .|..+.+..+++.  .++|+||.+.++.
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~~~lGa~~v-~~~~~~~~~~~~~~~~g~D~vid~~g~~  259 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELVRKLGADDV-IDYKSGSVEEQLKSLKPFDFILDNVGGS  259 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHTTCSEE-EETTSSCHHHHHHTSCCBSEEEESSCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHHHHcCCCEE-EECCchHHHHHHhhcCCCCEEEECCCCh
Confidence            46789999999999999999988889999998884 444332211122221 2444322222222  5789999995543


Q ss_pred             -H--Hhhhhh-cCCCEEEEeccc
Q 022625          175 -I--SNAGSL-KGVQHVILLSQL  193 (294)
Q Consensus       175 -~--~~~~~~-~gv~r~V~vSs~  193 (294)
                       .  ..+... ..-.++|.++..
T Consensus       260 ~~~~~~~~~~l~~~G~iv~~g~~  282 (375)
T 2vn8_A          260 TETWAPDFLKKWSGATYVTLVTP  282 (375)
T ss_dssp             HHHHGGGGBCSSSCCEEEESCCS
T ss_pred             hhhhHHHHHhhcCCcEEEEeCCC
Confidence             2  222211 123588888753

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.88  E-value=0.0017  Score=60.18  Aligned_cols=72  Identities=10%  Similarity=0.001  Sum_probs=55.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCC------------------CCHHHHHH
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA------------------SNKKFLKT  159 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~------------------~d~~~l~~  159 (294)
                      ++.+|+|.|+ |.+|...++.+...|++|++++|+++++.....-+.+++..|+                  .+.+.+.+
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            6789999998 9999999999999999999999998875544323445544331                  12356788


Q ss_pred             HhcCCcEEEEc
Q 022625          160 ALRGVRSIICP  170 (294)
Q Consensus       160 ~l~~~d~Vi~~  170 (294)
                      .++++|+||.+
T Consensus       262 ~l~~aDIVI~t  272 (381)
T 3p2y_A          262 AITKFDIVITT  272 (381)
T ss_dssp             HHTTCSEEEEC
T ss_pred             HHhcCCEEEEC
Confidence            89999999986

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=96.88  E-value=0.004  Score=58.02  Aligned_cols=71  Identities=11%  Similarity=0.164  Sum_probs=56.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      +++++|+|.|+ |.+|+.+++.+.+.|++|++++ ++.............+.+|+.|.+.+.++.+.+|+++.
T Consensus        22 m~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           22 WNSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            35789999997 8999999999999999999998 65432222223235678899999999999999999875

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.87  E-value=0.0021  Score=58.32  Aligned_cols=91  Identities=14%  Similarity=0.069  Sum_probs=59.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHh-cCCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l-~~~d~Vi~~~~  172 (294)
                      ++.+|+|+|| |.+|...++.+...|+ +|+++++++++......- .+ ...|..+.   +.+.+.. .++|+||.+.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~-~v~~~~~~~~~~~~~~~~~~g~D~vid~~g  240 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-AD-RLVNPLEEDLLEVVRRVTGSGVEVLLEFSG  240 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CS-EEECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HH-hccCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence            6889999999 9999999998888999 999999988765433221 11 12344432   2333322 36899999955


Q ss_pred             c--hHH---hhhhhcCCCEEEEeccc
Q 022625          173 G--FIS---NAGSLKGVQHVILLSQL  193 (294)
Q Consensus       173 ~--~~~---~~~~~~gv~r~V~vSs~  193 (294)
                      +  .+.   +.++..  .++|.++..
T Consensus       241 ~~~~~~~~~~~l~~~--G~iv~~g~~  264 (343)
T 2dq4_A          241 NEAAIHQGLMALIPG--GEARILGIP  264 (343)
T ss_dssp             CHHHHHHHHHHEEEE--EEEEECCCC
T ss_pred             CHHHHHHHHHHHhcC--CEEEEEecC
Confidence            3  222   223333  478888753

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.85  E-value=0.0045  Score=58.27  Aligned_cols=99  Identities=11%  Similarity=0.031  Sum_probs=63.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEE-e---ecCCCC----------------HH
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVES-M---AGDASN----------------KK  155 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~-v---~~D~~d----------------~~  155 (294)
                      ..++++|+|+||+|.||...++.+...|++|+++++++++......-+.+. +   ..|+.+                .+
T Consensus       218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (447)
T 4a0s_A          218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAK  297 (447)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHH
Confidence            346889999999999999999999999999999999887654332212211 1   122211                23


Q ss_pred             HHHHHh-cCCcEEEEcCCchHHh-hhhh-cCCCEEEEecccc
Q 022625          156 FLKTAL-RGVRSIICPSEGFISN-AGSL-KGVQHVILLSQLS  194 (294)
Q Consensus       156 ~l~~~l-~~~d~Vi~~~~~~~~~-~~~~-~gv~r~V~vSs~~  194 (294)
                      .+.+.. .++|+||.+.++...+ +... ..-.++|.+++..
T Consensus       298 ~v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~  339 (447)
T 4a0s_A          298 LVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSS  339 (447)
T ss_dssp             HHHHHHSSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTT
T ss_pred             HHHHHhCCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCC
Confidence            344443 3689999996543222 2111 1235899987654

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.83  E-value=0.00088  Score=61.50  Aligned_cols=92  Identities=17%  Similarity=0.048  Sum_probs=60.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc---cchhhhcCCCcEEeecCCCC--HHHHHHHhcCCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---RNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~---~~~~~~~~~~v~~v~~D~~d--~~~l~~~l~~~d~Vi~~~~  172 (294)
                      .+++|+|+|| |.||..+++.+...|++|+++++++   ++......-+.+.+  | .+  .+.+.+.-.++|+||.+.+
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~~~~~~~~~~~~~~d~vid~~g  255 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY--N-SSNGYDKLKDSVGKFDVIIDATG  255 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE--E-CTTCSHHHHHHHCCEEEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee--c-hHHHHHHHHHhCCCCCEEEECCC
Confidence            3899999999 9999999999999999999999988   66432221134444  4 33  1233332257899999854


Q ss_pred             c--hH-Hhhhhhc-CCCEEEEeccc
Q 022625          173 G--FI-SNAGSLK-GVQHVILLSQL  193 (294)
Q Consensus       173 ~--~~-~~~~~~~-gv~r~V~vSs~  193 (294)
                      +  .+ ..+.... .-.++|.++..
T Consensus       256 ~~~~~~~~~~~~l~~~G~iv~~g~~  280 (366)
T 2cdc_A          256 ADVNILGNVIPLLGRNGVLGLFGFS  280 (366)
T ss_dssp             CCTHHHHHHGGGEEEEEEEEECSCC
T ss_pred             ChHHHHHHHHHHHhcCCEEEEEecC
Confidence            3  23 3332221 12478888754

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.82  E-value=0.00099  Score=59.06  Aligned_cols=69  Identities=7%  Similarity=0.050  Sum_probs=49.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhc---CC-CcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF---GT-YVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~---~~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ...+++++|+|+ |++|+.++..|++.|. +|+++.|+.+++.+..   .. .+..+  ++.+.   ..  .++|+||++
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~--~~~~l---~~--~~~DivIna  188 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRIS--RYEAL---EG--QSFDIVVNA  188 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEE--CSGGG---TT--CCCSEEEEC
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEe--eHHHh---cc--cCCCEEEEC
Confidence            356899999997 8999999999999996 9999999988765432   21 12322  33221   11  678999998


Q ss_pred             CC
Q 022625          171 SE  172 (294)
Q Consensus       171 ~~  172 (294)
                      ++
T Consensus       189 Tp  190 (272)
T 3pwz_A          189 TS  190 (272)
T ss_dssp             SS
T ss_pred             CC
Confidence            43

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.81  E-value=0.0015  Score=57.79  Aligned_cols=62  Identities=10%  Similarity=0.018  Sum_probs=47.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      +++++|.|+ |+.|+.++..|++.|.+|+++.|+.+++.++..-+++..  ++.+       +.++|+||++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~--~~~~-------l~~~DiVIna  179 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF--MEPP-------KSAFDLIINA  179 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE--SSCC-------SSCCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe--cHHH-------hccCCEEEEc
Confidence            799999997 999999999999999999999999988765431123332  2333       1278999998

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.80  E-value=0.00046  Score=63.06  Aligned_cols=71  Identities=17%  Similarity=0.075  Sum_probs=45.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC--e-----EEEEEcCcc--ch----hhhcCCCcEEeecCCCCHHHHHHHhcCCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT--R-----IKALVKDKR--NA----MESFGTYVESMAGDASNKKFLKTALRGVR  165 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~--~-----V~~~~R~~~--~~----~~~~~~~v~~v~~D~~d~~~l~~~l~~~d  165 (294)
                      .++|+||||+|+||+.++..|+..+.  +     ++++++++.  ++    .++......+. .++.......+.++++|
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~~~daD   81 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATDKEEIAFKDLD   81 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEESCHHHHTTTCS
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcCCcHHHhCCCC
Confidence            37899999999999999999998775  5     888877642  21    11111000000 11111123457799999


Q ss_pred             EEEEc
Q 022625          166 SIICP  170 (294)
Q Consensus       166 ~Vi~~  170 (294)
                      +||++
T Consensus        82 vVvit   86 (333)
T 5mdh_A           82 VAILV   86 (333)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            99998

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.79  E-value=0.0037  Score=57.97  Aligned_cols=75  Identities=12%  Similarity=-0.063  Sum_probs=53.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCC----------------------C
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS----------------------N  153 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~----------------------d  153 (294)
                      ..++++|+|+|+ |.+|..+++.+...|.+|+++.|++.++.....-+.+++..|..                      .
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~  247 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ  247 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence            347899999996 99999999999999999999999887644322122333312221                      1


Q ss_pred             HHHHHHHhcCCcEEEEcC
Q 022625          154 KKFLKTALRGVRSIICPS  171 (294)
Q Consensus       154 ~~~l~~~l~~~d~Vi~~~  171 (294)
                      .+.+.+.++++|+||++.
T Consensus       248 ~~~l~~~~~~aDvVi~~~  265 (384)
T 1l7d_A          248 AEAVLKELVKTDIAITTA  265 (384)
T ss_dssp             HHHHHHHHTTCSEEEECC
T ss_pred             HHHHHHHhCCCCEEEECC
Confidence            234778889999999984

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.77  E-value=0.0019  Score=61.17  Aligned_cols=97  Identities=9%  Similarity=0.028  Sum_probs=62.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEE-ee---cCC--------CCH-------HH
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVES-MA---GDA--------SNK-------KF  156 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~-v~---~D~--------~d~-------~~  156 (294)
                      ..++.+|+|+||+|.||...++.+...|++|+++++++++......-+.+. +.   .|+        .+.       +.
T Consensus       226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~  305 (456)
T 3krt_A          226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR  305 (456)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence            346789999999999999999999999999999999887654332112221 11   111        121       44


Q ss_pred             HHHHh--cCCcEEEEcCCchHH-h---hhhhcCCCEEEEecccc
Q 022625          157 LKTAL--RGVRSIICPSEGFIS-N---AGSLKGVQHVILLSQLS  194 (294)
Q Consensus       157 l~~~l--~~~d~Vi~~~~~~~~-~---~~~~~gv~r~V~vSs~~  194 (294)
                      +.+..  .++|+||.+.++... .   +++..  .++|.++...
T Consensus       306 i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~--G~iv~~G~~~  347 (456)
T 3krt_A          306 IRELTGGEDIDIVFEHPGRETFGASVFVTRKG--GTITTCASTS  347 (456)
T ss_dssp             HHHHHTSCCEEEEEECSCHHHHHHHHHHEEEE--EEEEESCCTT
T ss_pred             HHHHhCCCCCcEEEEcCCchhHHHHHHHhhCC--cEEEEEecCC
Confidence            45544  378999998654322 2   22222  4788887543

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=96.75  E-value=0.0031  Score=57.93  Aligned_cols=91  Identities=13%  Similarity=0.055  Sum_probs=54.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccc----hhhhcCCCc----EEeecCC--C--CHHHHHHHhc-CC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN----AMESFGTYV----ESMAGDA--S--NKKFLKTALR-GV  164 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~----~~~~~~~~v----~~v~~D~--~--d~~~l~~~l~-~~  164 (294)
                      +++|.|.||+|.+|+++++.|.++. ++|+++.++...    ..+..+...    ..-..|+  .  |.+   ++++ ++
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~   84 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPK---HEEFEDV   84 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTT---SGGGTTC
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHH---HHhcCCC
Confidence            3689999999999999999998764 588888764322    221122110    0000111  1  222   2346 89


Q ss_pred             cEEEEcCCch----HHhhhhhcCCCEEEEeccc
Q 022625          165 RSIICPSEGF----ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       165 d~Vi~~~~~~----~~~~~~~~gv~r~V~vSs~  193 (294)
                      |+||.+.+..    ....+.+.|++ +|-.|+.
T Consensus        85 DvV~~atp~~~~~~~a~~~~~aG~~-VId~s~~  116 (354)
T 1ys4_A           85 DIVFSALPSDLAKKFEPEFAKEGKL-IFSNASA  116 (354)
T ss_dssp             CEEEECCCHHHHHHHHHHHHHTTCE-EEECCST
T ss_pred             CEEEECCCchHHHHHHHHHHHCCCE-EEECCch
Confidence            9999996643    33344566764 7666765

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=96.75  E-value=0.0037  Score=57.69  Aligned_cols=88  Identities=16%  Similarity=0.161  Sum_probs=52.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEEcCc--cchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDK--RNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~R~~--~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~  173 (294)
                      +++|.|.||||++|.++++.|.++++   ++..+....  .+........+.+.  ++..     ..++++|+||.+.+.
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~~~~~~--~~~~-----~~~~~~Dvvf~a~~~   74 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIE--ETTE-----TAFEGVDIALFSAGS   74 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTEEEEEE--ECCT-----TTTTTCSEEEECSCH
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCCCceEe--eCCH-----HHhcCCCEEEECCCh
Confidence            46899999999999999999988765   344443221  11111111112222  2221     125789999999664


Q ss_pred             h----HHhhhhhcCCCEEEEecccc
Q 022625          174 F----ISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       174 ~----~~~~~~~~gv~r~V~vSs~~  194 (294)
                      .    .+....+.|+ ++|-.|+..
T Consensus        75 ~~s~~~a~~~~~~G~-~vIDlSa~~   98 (366)
T 3pwk_A           75 STSAKYAPYAVKAGV-VVVDNTSYF   98 (366)
T ss_dssp             HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             HhHHHHHHHHHHCCC-EEEEcCCcc
Confidence            4    2333455676 577777753

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.74  E-value=0.0026  Score=57.39  Aligned_cols=66  Identities=8%  Similarity=-0.013  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      .+|+|.|.|+ |.+|..+++.|++.|++|++..|++++.......+++..       .++.++++++|+||.+.
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~-------~~~~e~~~~aDvVi~~v   95 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIH-------EQARAAARDADIVVSML   95 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEE-------SSHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEee-------CCHHHHHhcCCEEEEEC
Confidence            4689999986 999999999999999999999999987665544343321       23456677888888873

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.73  E-value=0.0018  Score=58.10  Aligned_cols=67  Identities=7%  Similarity=-0.006  Sum_probs=50.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+++|.|.|+ |.+|..+++.|++.|++|++..|++++.......++..    ..   +..++++++|+||.+.
T Consensus        19 ~~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~----~~---~~~~~~~~aDvvi~~v   85 (310)
T 3doj_A           19 SHMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASV----CE---SPAEVIKKCKYTIAML   85 (310)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE----CS---SHHHHHHHCSEEEECC
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeE----cC---CHHHHHHhCCEEEEEc
Confidence            34689999996 99999999999999999999999998766543333322    12   2345566778888773

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.73  E-value=0.0021  Score=56.88  Aligned_cols=65  Identities=9%  Similarity=-0.034  Sum_probs=48.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      |+|.|.|+ |.+|..+++.|++.|++|++.+|++++.......++..    .   .++.++++++|+||.+.+
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~---~~~~~~~~~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAER----A---ATPCEVVESCPVTFAMLA   66 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE----C---SSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee----c---CCHHHHHhcCCEEEEEcC
Confidence            78999996 99999999999999999999999998766543333322    1   233455667788887743

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.71  E-value=0.0016  Score=58.03  Aligned_cols=67  Identities=16%  Similarity=0.162  Sum_probs=50.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ...+++++|+|+ |+.|+.++..|.+.|. +|+++.|+.+++.++.. .+..+     +.+.+.+ + ++|+||+++
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~-~~~~~-----~~~~l~~-l-~~DivInaT  186 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG-EFKVI-----SYDELSN-L-KGDVIINCT  186 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT-TSEEE-----EHHHHTT-C-CCSEEEECS
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-hcCcc-----cHHHHHh-c-cCCEEEECC
Confidence            346799999997 8899999999999998 99999999988765433 33322     2233434 4 889999983

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.70  E-value=0.0079  Score=55.50  Aligned_cols=72  Identities=11%  Similarity=0.089  Sum_probs=57.0

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      .+++++|+|.|+ |.+|+.+++.+.+.|++|++++.++.......  .-..+..++.|.+.+.++++.+|+|..-
T Consensus        11 ~~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~--ad~~~~~~~~d~~~l~~~~~~~dvI~~~   82 (389)
T 3q2o_A           11 ILPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCAQV--ADIEIVASYDDLKAIQHLAEISDVVTYE   82 (389)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTTTT--CSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchHHh--CCceEecCcCCHHHHHHHHHhCCEeeec
Confidence            457899999997 88999999999999999999987654321111  1245668999999999999999998764

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.70  E-value=0.0029  Score=57.83  Aligned_cols=92  Identities=9%  Similarity=0.033  Sum_probs=63.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-CCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc--h
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGVRSIICPSEG--F  174 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~--~  174 (294)
                      ++.+|+|+|+ |.+|...++.+...|.+|+++++++++..... .-+.+. ..|..+.+.+.+...++|+||.+.++  .
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~-vi~~~~~~~~~~~~~g~D~vid~~g~~~~  257 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADD-YVIGSDQAKMSELADSLDYVIDTVPVHHA  257 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSC-EEETTCHHHHHHSTTTEEEEEECCCSCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCce-eeccccHHHHHHhcCCCCEEEECCCChHH
Confidence            6889999996 99999999888888999999999887754332 222221 23455666677666789999998442  2


Q ss_pred             HHh---hhhhcCCCEEEEeccc
Q 022625          175 ISN---AGSLKGVQHVILLSQL  193 (294)
Q Consensus       175 ~~~---~~~~~gv~r~V~vSs~  193 (294)
                      +..   .++..  .++|.++..
T Consensus       258 ~~~~~~~l~~~--G~iv~~G~~  277 (357)
T 2cf5_A          258 LEPYLSLLKLD--GKLILMGVI  277 (357)
T ss_dssp             SHHHHTTEEEE--EEEEECSCC
T ss_pred             HHHHHHHhccC--CEEEEeCCC
Confidence            222   22222  478888754

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.67  E-value=0.0025  Score=58.69  Aligned_cols=93  Identities=11%  Similarity=0.051  Sum_probs=62.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc--h
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG--F  174 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~--~  174 (294)
                      .++.+|+|+|+ |.+|...++.+...|++|+++++++++......-+.+. ..|..+.+.+++...++|+||.+.++  .
T Consensus       193 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~-vi~~~~~~~~~~~~~g~Dvvid~~g~~~~  270 (369)
T 1uuf_A          193 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADE-VVNSRNADEMAAHLKSFDFILNTVAAPHN  270 (369)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSE-EEETTCHHHHHTTTTCEEEEEECCSSCCC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcE-EeccccHHHHHHhhcCCCEEEECCCCHHH
Confidence            36789999998 88999999888889999999999887754332112222 23556655555555789999998442  2


Q ss_pred             HHhh---hhhcCCCEEEEeccc
Q 022625          175 ISNA---GSLKGVQHVILLSQL  193 (294)
Q Consensus       175 ~~~~---~~~~gv~r~V~vSs~  193 (294)
                      +..+   ++..  .++|.++..
T Consensus       271 ~~~~~~~l~~~--G~iv~~G~~  290 (369)
T 1uuf_A          271 LDDFTTLLKRD--GTMTLVGAP  290 (369)
T ss_dssp             HHHHHTTEEEE--EEEEECCCC
T ss_pred             HHHHHHHhccC--CEEEEeccC
Confidence            3222   2232  478887654

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.67  E-value=0.0014  Score=59.33  Aligned_cols=69  Identities=17%  Similarity=0.234  Sum_probs=47.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccchhh-hcCCCcEEeecCCCC---HHHHHHHhcCCcEEEEc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME-SFGTYVESMAGDASN---KKFLKTALRGVRSIICP  170 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~~~-~~~~~v~~v~~D~~d---~~~l~~~l~~~d~Vi~~  170 (294)
                      |+|.|+||+|++|..++..|+..|  .+|.++++++.+... .+.....  ..++..   ...++++++++|+||++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~--~~~l~~~~~t~d~~~a~~~aDvVvi~   75 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIET--RATVKGYLGPEQLPDCLKGCDVVVIP   75 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSS--SCEEEEEESGGGHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCc--CceEEEecCCCCHHHHhCCCCEEEEC
Confidence            589999999999999999999888  789999998722110 0111110  011211   13466789999999998

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.66  E-value=0.0036  Score=58.50  Aligned_cols=73  Identities=12%  Similarity=0.055  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCC-------------CH-------HH
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-------------NK-------KF  156 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~-------------d~-------~~  156 (294)
                      ..+++|+|+|+ |.+|..+++.+...|++|++++|+++++.....-+.+++..|..             +.       +.
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  248 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL  248 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence            46899999997 99999999999999999999999987654432223444433321             11       14


Q ss_pred             HHHHhcCCcEEEEc
Q 022625          157 LKTALRGVRSIICP  170 (294)
Q Consensus       157 l~~~l~~~d~Vi~~  170 (294)
                      +.+.+.++|+||.+
T Consensus       249 l~e~~~~aDvVI~~  262 (401)
T 1x13_A          249 FAAQAKEVDIIVTT  262 (401)
T ss_dssp             HHHHHHHCSEEEEC
T ss_pred             HHHHhCCCCEEEEC
Confidence            67778889999988

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.66  E-value=0.0051  Score=57.44  Aligned_cols=72  Identities=10%  Similarity=0.014  Sum_probs=54.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCC----------------CC------HH
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA----------------SN------KK  155 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~----------------~d------~~  155 (294)
                      ++.+|+|+|+ |-+|...++.+...|++|+++++++.+......-+.+++..++                ++      .+
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            5689999998 9999999999999999999999998765443222344433321                22      25


Q ss_pred             HHHHHhcCCcEEEEc
Q 022625          156 FLKTALRGVRSIICP  170 (294)
Q Consensus       156 ~l~~~l~~~d~Vi~~  170 (294)
                      .+.++++++|+||.+
T Consensus       268 ~l~e~l~~aDVVI~t  282 (405)
T 4dio_A          268 LVAEHIAKQDIVITT  282 (405)
T ss_dssp             HHHHHHHTCSEEEEC
T ss_pred             HHHHHhcCCCEEEEC
Confidence            788899999999987

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.65  E-value=0.0042  Score=56.69  Aligned_cols=88  Identities=13%  Similarity=0.064  Sum_probs=57.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCc-------------------cchhh------hcCCCcEE--e
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAME------SFGTYVES--M  147 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~-------------------~~~~~------~~~~~v~~--v  147 (294)
                      .+.+++|+|.|+ |++|.++++.|+..|. ++++++++.                   .|+..      ...+.+++  +
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            556899999998 8999999999999997 666666543                   11110      11233443  3


Q ss_pred             ecCCC--------------CHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCC
Q 022625          148 AGDAS--------------NKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGV  184 (294)
Q Consensus       148 ~~D~~--------------d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv  184 (294)
                      ..++.              +.+.+.++++++|+||.+...+     +.++|...++
T Consensus       110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~  165 (340)
T 3rui_A          110 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENK  165 (340)
T ss_dssp             CCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTTC
T ss_pred             eccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcCC
Confidence            33331              2345677889999999985432     4456666654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.60  E-value=0.0014  Score=61.31  Aligned_cols=69  Identities=17%  Similarity=0.158  Sum_probs=52.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+++|+|.|+ |.+|+.+++.|...|+ +|+++.|+++++.+... -+.+.+  ++   +.+.+.+.++|+||.++
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~--~~---~~l~~~l~~aDvVi~at  235 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAV--RF---DELVDHLARSDVVVSAT  235 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEEC--CG---GGHHHHHHTCSEEEECC
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCcee--cH---HhHHHHhcCCCEEEEcc
Confidence            57899999998 9999999999999998 99999999876532211 023322  22   34566778999999983

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.59  E-value=0.0037  Score=57.19  Aligned_cols=95  Identities=15%  Similarity=0.046  Sum_probs=61.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCccchhhhcCCCcEEeecCCCCH--HHHHHHhc--CCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNK--KFLKTALR--GVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~--~~l~~~l~--~~d~Vi~~~  171 (294)
                      .++.+|+|+|| |.+|...++.+... |++|+++++++++......-+.+.+ .|..+.  +.+.++..  ++|+||.+.
T Consensus       185 ~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~v~~~~~g~g~Dvvid~~  262 (359)
T 1h2b_A          185 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHV-VDARRDPVKQVMELTRGRGVNVAMDFV  262 (359)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEE-EETTSCHHHHHHHHTTTCCEEEEEESS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEE-EeccchHHHHHHHHhCCCCCcEEEECC
Confidence            36789999999 99999999888888 9999999998876543322222221 244443  44444443  689999995


Q ss_pred             Cch---HHhhhhhcCCCEEEEeccc
Q 022625          172 EGF---ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       172 ~~~---~~~~~~~~gv~r~V~vSs~  193 (294)
                      ++-   ..+.+.+..-.++|.++..
T Consensus       263 G~~~~~~~~~~~~~~~G~~v~~g~~  287 (359)
T 1h2b_A          263 GSQATVDYTPYLLGRMGRLIIVGYG  287 (359)
T ss_dssp             CCHHHHHHGGGGEEEEEEEEECCCS
T ss_pred             CCchHHHHHHHhhcCCCEEEEEeCC
Confidence            542   2232222233578877653

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.59  E-value=0.0042  Score=54.37  Aligned_cols=67  Identities=15%  Similarity=0.124  Sum_probs=51.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+ +++|.|+ |+.|+.++..|++.|. +|+++.|+++++.++.. .+...  .   .+++.+.++++|+||+++
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~-~~~~~--~---~~~~~~~~~~aDiVInat  174 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDF-PVKIF--S---LDQLDEVVKKAKSLFNTT  174 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS-SCEEE--E---GGGHHHHHHTCSEEEECS
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-HcccC--C---HHHHHhhhcCCCEEEECC
Confidence            356 9999997 9999999999999998 99999999988765432 22221  1   234566788999999983

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=96.57  E-value=0.0067  Score=55.35  Aligned_cols=90  Identities=13%  Similarity=0.002  Sum_probs=55.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCc---c---chhhhcC---C--CcEEeecCCCCHHHHHHHhcCCcE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDK---R---NAMESFG---T--YVESMAGDASNKKFLKTALRGVRS  166 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~---~---~~~~~~~---~--~v~~v~~D~~d~~~l~~~l~~~d~  166 (294)
                      |++|.|.||||.+|+++++.|.++ .+++..+....   +   +..+.++   .  .+.+...  .+.+   ++++++|+
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~Dv   78 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGVDV   78 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCSE
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCCCE
Confidence            579999999999999999999884 56888775543   2   1222211   1  1222111  0222   23378999


Q ss_pred             EEEcCCch----HHhhhhhcCCCEEEEecccc
Q 022625          167 IICPSEGF----ISNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       167 Vi~~~~~~----~~~~~~~~gv~r~V~vSs~~  194 (294)
                      ||.+.+..    ++..+.+.|+ ++|-.|+..
T Consensus        79 vf~a~p~~~s~~~~~~~~~~g~-~vIDlSa~f  109 (337)
T 3dr3_A           79 VFLATAHEVSHDLAPQFLEAGC-VVFDLSGAF  109 (337)
T ss_dssp             EEECSCHHHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             EEECCChHHHHHHHHHHHHCCC-EEEEcCCcc
Confidence            99996543    2333455676 577777763

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.56  E-value=0.0071  Score=52.70  Aligned_cols=92  Identities=11%  Similarity=0.117  Sum_probs=57.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHh-----cCCcEEEEcCC-
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-----RGVRSIICPSE-  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l-----~~~d~Vi~~~~-  172 (294)
                      ++|+|.||+|.+|+.+++.+.+. +++++++.+..+.+.+......+ +..|++.++...+.+     .++++|+..++ 
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~   79 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF   79 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCC-EEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCc-EEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence            47999999999999999999866 89999887654443332222233 566777775554433     36677776532 


Q ss_pred             --c---hHHhhhhhc-CCCEEEEeccc
Q 022625          173 --G---FISNAGSLK-GVQHVILLSQL  193 (294)
Q Consensus       173 --~---~~~~~~~~~-gv~r~V~vSs~  193 (294)
                        .   .+.+++++. ++ .+++.+..
T Consensus        80 ~~e~~~~l~~aa~~~~~~-~vv~a~N~  105 (245)
T 1p9l_A           80 TAERFQQVESWLVAKPNT-SVLIAPNF  105 (245)
T ss_dssp             CHHHHHHHHHHHHTSTTC-EEEECSCC
T ss_pred             CHHHHHHHHHHHHhCCCC-CEEEECCc
Confidence              1   133344444 43 45666554

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=96.56  E-value=0.0042  Score=57.41  Aligned_cols=89  Identities=16%  Similarity=0.092  Sum_probs=52.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHH-CCC---eEEEEEcCccchhhh--cCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIV-KRT---RIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~-~g~---~V~~~~R~~~~~~~~--~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      |++|.|.||+|.+|+++++.|+. +++   ++.++..+ +.....  +. +.+....|..+.+.    ++++|+||.+.+
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~-s~G~~v~~~~-g~~i~~~~~~~~~~----~~~~DvVf~a~g   74 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS-QLGQAAPSFG-GTTGTLQDAFDLEA----LKALDIIVTCQG   74 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-STTSBCCGGG-TCCCBCEETTCHHH----HHTCSEEEECSC
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC-CCCCCccccC-CCceEEEecCChHH----hcCCCEEEECCC
Confidence            46899999999999999995544 543   45555443 111110  11 12233334445444    358999999966


Q ss_pred             ch----HHhhhhhcCCCE-EEEeccc
Q 022625          173 GF----ISNAGSLKGVQH-VILLSQL  193 (294)
Q Consensus       173 ~~----~~~~~~~~gv~r-~V~vSs~  193 (294)
                      ..    ++....+.|++. +|=.|+.
T Consensus        75 ~~~s~~~a~~~~~~G~k~vVID~ss~  100 (367)
T 1t4b_A           75 GDYTNEIYPKLRESGWQGYWIDAASS  100 (367)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred             chhHHHHHHHHHHCCCCEEEEcCChh
Confidence            44    344456678753 4444543

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=96.54  E-value=0.0035  Score=59.64  Aligned_cols=83  Identities=13%  Similarity=0.161  Sum_probs=57.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-C---eEEEEEcCccch--hhhcCCCcEEeecCC--CCH-HHHHHHhcCCcEEEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR-T---RIKALVKDKRNA--MESFGTYVESMAGDA--SNK-KFLKTALRGVRSIIC  169 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g-~---~V~~~~R~~~~~--~~~~~~~v~~v~~D~--~d~-~~l~~~l~~~d~Vi~  169 (294)
                      .++|+|.|+ |+||+.+++.|+++. +   +|++++.+....  .+..  ++++...++  .|. +.+.+++++.|+||+
T Consensus        13 ~~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~--g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN   89 (480)
T 2ph5_A           13 KNRFVILGF-GCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQY--GVSFKLQQITPQNYLEVIGSTLEENDFLID   89 (480)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHH--TCEEEECCCCTTTHHHHTGGGCCTTCEEEE
T ss_pred             CCCEEEECc-CHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhc--CCceeEEeccchhHHHHHHHHhcCCCEEEE
Confidence            467999995 999999999999864 4   688887655432  1222  345555555  444 335567777799999


Q ss_pred             cCCch----HHhhhhhcCC
Q 022625          170 PSEGF----ISNAGSLKGV  184 (294)
Q Consensus       170 ~~~~~----~~~~~~~~gv  184 (294)
                      +...+    ++++|.+.|+
T Consensus        90 ~s~~~~~l~Im~acleaGv  108 (480)
T 2ph5_A           90 VSIGISSLALIILCNQKGA  108 (480)
T ss_dssp             CCSSSCHHHHHHHHHHHTC
T ss_pred             CCccccCHHHHHHHHHcCC
Confidence            84322    6788889986

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.54  E-value=0.0066  Score=54.30  Aligned_cols=64  Identities=6%  Similarity=-0.032  Sum_probs=44.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      .++|.+.|- |..|..+++.|++.||+|++..|++++.......+.+..       ++..++++.+|+||.+
T Consensus         5 s~kIgfIGL-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~-------~s~~e~~~~~dvvi~~   68 (297)
T 4gbj_A            5 SEKIAFLGL-GNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVV-------ENAIDAITPGGIVFSV   68 (297)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEEC-------SSGGGGCCTTCEEEEC
T ss_pred             CCcEEEEec-HHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEe-------CCHHHHHhcCCceeee
Confidence            358999996 999999999999999999999999988766544444432       2345677889999988

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.53  E-value=0.00077  Score=59.81  Aligned_cols=34  Identities=12%  Similarity=0.262  Sum_probs=28.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKD  132 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~-~g~~V~~~~R~  132 (294)
                      +++|+|+|++|.+|+.+++.+.+ .+++++++++.
T Consensus         5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~   39 (273)
T 1dih_A            5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALER   39 (273)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            47999999999999999999875 57888866543

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.52  E-value=0.0048  Score=56.08  Aligned_cols=92  Identities=10%  Similarity=0.079  Sum_probs=59.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCC--HHHHHHHh-cCCcEEEEcCCch
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTAL-RGVRSIICPSEGF  174 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d--~~~l~~~l-~~~d~Vi~~~~~~  174 (294)
                      ++.+|+|+||+|.+|...++.+...|++|+++++++++......-+.+.+ .|..+  .+.+.+.- .++|+||.+.++-
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~g~Dvv~d~~g~~  228 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIV-LNHKESLLNQFKTQGIELVDYVFCTFNTD  228 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEE-ECTTSCHHHHHHHHTCCCEEEEEESSCHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEE-EECCccHHHHHHHhCCCCccEEEECCCch
Confidence            68999999999999999999999999999999998876443321122221 23322  23344432 3689999985532


Q ss_pred             --HHh---hhhhcCCCEEEEecc
Q 022625          175 --ISN---AGSLKGVQHVILLSQ  192 (294)
Q Consensus       175 --~~~---~~~~~gv~r~V~vSs  192 (294)
                        +..   +++..  .++|.++.
T Consensus       229 ~~~~~~~~~l~~~--G~iv~~~~  249 (346)
T 3fbg_A          229 MYYDDMIQLVKPR--GHIATIVA  249 (346)
T ss_dssp             HHHHHHHHHEEEE--EEEEESSC
T ss_pred             HHHHHHHHHhccC--CEEEEECC
Confidence              222   22222  47777654

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.52  E-value=0.0049  Score=55.72  Aligned_cols=66  Identities=18%  Similarity=0.134  Sum_probs=52.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+.+|+|.|.|. |.||+.+++.|...|++|++..|++.+..     .+....    ...++.++++.+|+|+.+
T Consensus       135 ~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~-----~~~~~~----~~~~l~ell~~aDiV~l~  200 (315)
T 3pp8_A          135 YTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSWP-----GVESYV----GREELRAFLNQTRVLINL  200 (315)
T ss_dssp             CCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCCT-----TCEEEE----SHHHHHHHHHTCSEEEEC
T ss_pred             CCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhhh-----hhhhhc----ccCCHHHHHhhCCEEEEe
Confidence            3567899999996 99999999999999999999999876432     122221    236788999999999987

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.51  E-value=0.0016  Score=59.55  Aligned_cols=93  Identities=10%  Similarity=0.050  Sum_probs=59.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH-HHHHHHhcCCcEEEEcCCc--
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTALRGVRSIICPSEG--  173 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~-~~l~~~l~~~d~Vi~~~~~--  173 (294)
                      .++.+|+|+|| |.+|...++.+...|++|+++++++++......-+.+.+ .|..+. +..++...++|+||.+.++  
T Consensus       178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~~~~~~~~~D~vid~~g~~~  255 (360)
T 1piw_A          178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHY-IATLEEGDWGEKYFDTFDLIVVCASSLT  255 (360)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEE-EEGGGTSCHHHHSCSCEEEEEECCSCST
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEE-EcCcCchHHHHHhhcCCCEEEECCCCCc
Confidence            36789999999 999999998888899999999998876543221112211 233332 2233333589999998443  


Q ss_pred             --hHH---hhhhhcCCCEEEEeccc
Q 022625          174 --FIS---NAGSLKGVQHVILLSQL  193 (294)
Q Consensus       174 --~~~---~~~~~~gv~r~V~vSs~  193 (294)
                        .+.   +.++..  .++|.++..
T Consensus       256 ~~~~~~~~~~l~~~--G~iv~~g~~  278 (360)
T 1piw_A          256 DIDFNIMPKAMKVG--GRIVSISIP  278 (360)
T ss_dssp             TCCTTTGGGGEEEE--EEEEECCCC
T ss_pred             HHHHHHHHHHhcCC--CEEEEecCC
Confidence              222   222232  478887654

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.50  E-value=0.0023  Score=55.43  Aligned_cols=41  Identities=10%  Similarity=-0.002  Sum_probs=33.9

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN  135 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~  135 (294)
                      .....+++|.|.|+ |.+|..+++.|++.|++|++..|++++
T Consensus        14 ~~~~~~~kIgiIG~-G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           14 NLYFQGMKIAVLGT-GTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             -----CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             ccccCCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            44567899999985 999999999999999999999999876

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.48  E-value=0.0018  Score=57.35  Aligned_cols=65  Identities=8%  Similarity=-0.056  Sum_probs=48.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      +++|.|.|. |.+|..+++.|++.|++|++..|++++.......++..    ..+   ..++++++|+||.+.
T Consensus         1 M~~I~iiG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~~~---~~~~~~~advvi~~v   65 (287)
T 3pdu_A            1 MTTYGFLGL-GIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQ----ASS---PAEVCAACDITIAML   65 (287)
T ss_dssp             CCCEEEECC-STTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEE----CSC---HHHHHHHCSEEEECC
T ss_pred             CCeEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee----cCC---HHHHHHcCCEEEEEc
Confidence            468999995 99999999999999999999999998765543223322    122   345566778888773

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.46  E-value=0.0024  Score=58.09  Aligned_cols=91  Identities=12%  Similarity=0.105  Sum_probs=59.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc--h
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG--F  174 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~--~  174 (294)
                      .++.+|+|+|+ |.+|...++.+...|.+|+++++++++......-+.+.+.   .+.+.+.+   ++|+||.+.++  .
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~---~~~~~~~~---~~D~vid~~g~~~~  247 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY---TDPKQCKE---ELDFIISTIPTHYD  247 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE---SSGGGCCS---CEEEEEECCCSCCC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec---CCHHHHhc---CCCEEEECCCcHHH
Confidence            46889999997 9999999988888999999999988775543322333332   33333322   89999998432  2


Q ss_pred             HHhhhhhc-CCCEEEEecccc
Q 022625          175 ISNAGSLK-GVQHVILLSQLS  194 (294)
Q Consensus       175 ~~~~~~~~-gv~r~V~vSs~~  194 (294)
                      +..+.... .-.++|.++...
T Consensus       248 ~~~~~~~l~~~G~iv~~G~~~  268 (348)
T 3two_A          248 LKDYLKLLTYNGDLALVGLPP  268 (348)
T ss_dssp             HHHHHTTEEEEEEEEECCCCC
T ss_pred             HHHHHHHHhcCCEEEEECCCC
Confidence            33322211 124788886543

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.46  E-value=0.0072  Score=54.87  Aligned_cols=67  Identities=12%  Similarity=-0.046  Sum_probs=50.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+.+++|.|.|. |.||+.+++.|...|++|++..|+.++.......++..     .+   +.++++++|+|+.+
T Consensus       151 ~~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-----~~---l~e~l~~aDvVi~~  217 (330)
T 2gcg_A          151 YGLTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEF-----VS---TPELAAQSDFIVVA  217 (330)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEE-----CC---HHHHHHHCSEEEEC
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCcee-----CC---HHHHHhhCCEEEEe
Confidence            3567899999997 99999999999999999999998876543322222332     12   45667889999987

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.45  E-value=0.018  Score=50.22  Aligned_cols=94  Identities=14%  Similarity=0.117  Sum_probs=61.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCc-------------------cchhh------hcCCC--cEEe
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAME------SFGTY--VESM  147 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~-------------------~~~~~------~~~~~--v~~v  147 (294)
                      .+.+++|+|.|+ |++|+++++.|+..|. ++++++++.                   .|+..      ...+.  ++.+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            456789999998 7799999999999997 666665542                   11111      01223  3444


Q ss_pred             ecCCCCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEecc
Q 022625          148 AGDASNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       148 ~~D~~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~vSs  192 (294)
                      ..+++ .+.+.++++++|+||.+.+.+     +.+.+.+.++. +|..+.
T Consensus       104 ~~~~~-~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p-~i~~~~  151 (251)
T 1zud_1          104 QQRLT-GEALKDAVARADVVLDCTDNMATRQEINAACVALNTP-LITASA  151 (251)
T ss_dssp             CSCCC-HHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCC-EEEEEE
T ss_pred             eccCC-HHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCC-EEEEec
Confidence            44454 466778889999999985543     45566666654 555543

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=96.44  E-value=0.006  Score=59.24  Aligned_cols=72  Identities=17%  Similarity=0.196  Sum_probs=62.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCC-CcEEeecCCCCHHHHHHH-hcCCcEEEEc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTA-LRGVRSIICP  170 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~  170 (294)
                      ..+.++|.|+ |.+|+.++++|.+.|++|+++..+++........ ++.++.+|.++++.++++ ++.+|++|.+
T Consensus       126 ~~~hviI~G~-g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t  199 (565)
T 4gx0_A          126 TRGHILIFGI-DPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIAN  199 (565)
T ss_dssp             CCSCEEEESC-CHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred             cCCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEEe
Confidence            4578999997 8999999999999999999999999887665555 799999999999998875 6788999875

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.44  E-value=0.0011  Score=60.77  Aligned_cols=72  Identities=10%  Similarity=-0.019  Sum_probs=49.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccchhh----hcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~~~----~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      +++++|.|+||+|++|+.++..|+.+|  .+|++++.+++++..    +....  +...++.-.....++++++|+||++
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~--~~~~~i~~t~d~~~al~dADvVvit   83 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG--FEGLNLTFTSDIKEALTDAKYIVSS   83 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC--CTTCCCEEESCHHHHHTTEEEEEEC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc--CCCCceEEcCCHHHHhCCCCEEEEc
Confidence            356899999999999999999999998  489999988765332    11000  0001121112345779999999998

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=96.44  E-value=0.0022  Score=57.74  Aligned_cols=72  Identities=8%  Similarity=0.048  Sum_probs=50.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEc--CccchhhhcCCCcEEe------ecCCCCHHHHHHHhcCCcEEEEcC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK--DKRNAMESFGTYVESM------AGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R--~~~~~~~~~~~~v~~v------~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      |+|.|.|+ |.+|..++..|++.|++|+++.|  ++++.......+....      .....+.+++.++++++|+||.+.
T Consensus         1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v   79 (335)
T 1txg_A            1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (335)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC
Confidence            57999997 99999999999999999999999  7766554333221100      001222224556788999999984


Q ss_pred             C
Q 022625          172 E  172 (294)
Q Consensus       172 ~  172 (294)
                      .
T Consensus        80 ~   80 (335)
T 1txg_A           80 S   80 (335)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.44  E-value=0.0023  Score=56.58  Aligned_cols=67  Identities=15%  Similarity=0.200  Sum_probs=50.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCC-CcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+++|+|.|+ |.+|+.++..|.+.|++|.++.|+++++.+.... +++.  .+     .+.+.++++|+||++.
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~--~~-----~~~~~~~~aDiVi~at  194 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEV--VN-----SPEEVIDKVQVIVNTT  194 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEE--CS-----CGGGTGGGCSEEEECS
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCee--eh-----hHHhhhcCCCEEEEeC
Confidence            45789999996 8999999999999999999999998776544321 2222  11     2345677899999983

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.43  E-value=0.016  Score=53.14  Aligned_cols=69  Identities=12%  Similarity=0.153  Sum_probs=54.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ||+|+|+|+ |..|+.+++.|.+.|++|+++..++........  -..+..|+.|.+.+.++++++|+|+..
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~~~~~d~v~~~   69 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQVA--DEQIVAGFFDSERIEDLVKGSDVTTYD   69 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGGGS--SEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhC--ceEEECCCCCHHHHHHHHhcCCEEEec
Confidence            478999997 899999999999999999998876543211122  235677999999998888999998875

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=96.42  E-value=0.0088  Score=54.79  Aligned_cols=89  Identities=10%  Similarity=0.015  Sum_probs=54.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCc-c---chhhhcCCC---------cEEeecCCCCHHHHHHHhcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDK-R---NAMESFGTY---------VESMAGDASNKKFLKTALRGV  164 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~-~---~~~~~~~~~---------v~~v~~D~~d~~~l~~~l~~~  164 (294)
                      +++|.|.||+|.+|+++++.|.++. .+++++..+. .   +..+.++..         ......|+ |.+.    +.++
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~----~~~v   78 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-NYED----HKDV   78 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-SGGG----GTTC
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeC-CHHH----hcCC
Confidence            4689999999999999999998764 5888886222 1   122112110         11111232 2222    3689


Q ss_pred             cEEEEcCCch----HHhhhhhcCCCEEEEeccc
Q 022625          165 RSIICPSEGF----ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       165 d~Vi~~~~~~----~~~~~~~~gv~r~V~vSs~  193 (294)
                      |+||.+.+..    ++..+.+.|++ +|-.|+.
T Consensus        79 DvVf~atp~~~s~~~a~~~~~aG~~-VId~s~~  110 (350)
T 2ep5_A           79 DVVLSALPNELAESIELELVKNGKI-VVSNASP  110 (350)
T ss_dssp             SEEEECCCHHHHHHHHHHHHHTTCE-EEECSST
T ss_pred             CEEEECCChHHHHHHHHHHHHCCCE-EEECCcc
Confidence            9999996643    34455667765 7777765

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.42  E-value=0.0059  Score=54.45  Aligned_cols=52  Identities=13%  Similarity=0.220  Sum_probs=41.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      +++|.|.||.|.+|..++..|.+.|++|+++.|+++.                    ...++++++|+||.+
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--------------------~~~~~~~~aDvVila   72 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--------------------VAESILANADVVIVS   72 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--------------------GHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--------------------CHHHHhcCCCEEEEe
Confidence            4689999988999999999999999999999887642                    233456667777766

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.42  E-value=0.012  Score=54.02  Aligned_cols=69  Identities=7%  Similarity=-0.112  Sum_probs=49.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      +.+|+|.|.|. |.+|..+++.|++.|++|++..|++++.......++..    ..+.+.+.+..+..|+||.+
T Consensus        20 m~~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~----~~s~~e~~~~a~~~DvVi~~   88 (358)
T 4e21_A           20 FQSMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAG----ARSIEEFCAKLVKPRVVWLM   88 (358)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBC----CSSHHHHHHHSCSSCEEEEC
T ss_pred             hcCCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEE----eCCHHHHHhcCCCCCEEEEe
Confidence            34589999995 99999999999999999999999998766554433321    23444333333334998887

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.42  E-value=0.003  Score=57.35  Aligned_cols=73  Identities=12%  Similarity=0.022  Sum_probs=49.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCC-CcEEeec------CCC-CHHHHHHHhcCCcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAG------DAS-NKKFLKTALRGVRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~v~~v~~------D~~-d~~~l~~~l~~~d~Vi~~  170 (294)
                      .|+|+|.|+ |.+|..++..|.+.|++|+++.|++++....... .+.+...      .+. ...++.++++++|+||.+
T Consensus         4 ~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~   82 (359)
T 1bg6_A            4 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV   82 (359)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence            479999997 9999999999999999999999988765433211 1211110      010 012244567889999988


Q ss_pred             CC
Q 022625          171 SE  172 (294)
Q Consensus       171 ~~  172 (294)
                      ..
T Consensus        83 v~   84 (359)
T 1bg6_A           83 VP   84 (359)
T ss_dssp             SC
T ss_pred             CC
Confidence            43

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.41  E-value=0.007  Score=55.03  Aligned_cols=94  Identities=12%  Similarity=0.032  Sum_probs=61.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCC----CHHHHHHHh-----cCCcEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS----NKKFLKTAL-----RGVRSI  167 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~----d~~~l~~~l-----~~~d~V  167 (294)
                      .++.+|+|+|+ |.+|...++.+...|++|+++.+++++......-+.+. ..|..    ..+.+.+..     .++|+|
T Consensus       167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~~~~~~~~~~~~~i~~~~~~~~g~g~D~v  244 (352)
T 1e3j_A          167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADV-TLVVDPAKEEESSIIERIRSAIGDLPNVT  244 (352)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCCSEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCE-EEcCcccccHHHHHHHHhccccCCCCCEE
Confidence            36789999997 99999999888889999999998887654332222221 12333    245566555     368999


Q ss_pred             EEcCCch--HHhhhhhc-CCCEEEEecc
Q 022625          168 ICPSEGF--ISNAGSLK-GVQHVILLSQ  192 (294)
Q Consensus       168 i~~~~~~--~~~~~~~~-gv~r~V~vSs  192 (294)
                      |.+.++-  +..+.... .-.++|.++.
T Consensus       245 id~~g~~~~~~~~~~~l~~~G~iv~~G~  272 (352)
T 1e3j_A          245 IDCSGNEKCITIGINITRTGGTLMLVGM  272 (352)
T ss_dssp             EECSCCHHHHHHHHHHSCTTCEEEECSC
T ss_pred             EECCCCHHHHHHHHHHHhcCCEEEEEec
Confidence            9995432  22222211 2358888875

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.40  E-value=0.003  Score=56.59  Aligned_cols=66  Identities=15%  Similarity=0.094  Sum_probs=49.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      .+++|.|.|. |.+|..+++.|++.|++|++..|++++.......++..    ..   ++.++++++|+||.+.
T Consensus         8 ~~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~~---~~~e~~~~aDvVi~~v   73 (306)
T 3l6d_A            8 FEFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHL----CE---SVKAALSASPATIFVL   73 (306)
T ss_dssp             CSCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEE----CS---SHHHHHHHSSEEEECC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee----cC---CHHHHHhcCCEEEEEe
Confidence            4678999995 99999999999999999999999988765443222321    12   3445667789999883

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.40  E-value=0.0048  Score=54.94  Aligned_cols=65  Identities=5%  Similarity=-0.157  Sum_probs=48.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      .++|.|.|. |.+|..+++.|++.|++|++++|++++.......+++.    ..   ++.++++ +|+||.+.+
T Consensus        15 ~~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~~---~~~~~~~-aDvvi~~vp   79 (296)
T 3qha_A           15 QLKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATL----AD---SVADVAA-ADLIHITVL   79 (296)
T ss_dssp             CCCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEE----CS---SHHHHTT-SSEEEECCS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEE----cC---CHHHHHh-CCEEEEECC
Confidence            468999995 99999999999999999999999998766543333332    12   3445666 888888733

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.39  E-value=0.017  Score=52.96  Aligned_cols=95  Identities=13%  Similarity=0.014  Sum_probs=60.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCC-----HHHHHHHhc-CCcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN-----KKFLKTALR-GVRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d-----~~~l~~~l~-~~d~Vi~  169 (294)
                      .++.+|+|+|+ |.+|...++.+...|. +|+++++++++......-+.+.+ .|..+     .+.+.+... ++|+||.
T Consensus       191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~~g~D~vid  268 (374)
T 1cdo_A          191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDF-VNPNDHSEPISQVLSKMTNGGVDFSLE  268 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEE-ECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceE-EeccccchhHHHHHHHHhCCCCCEEEE
Confidence            46789999996 9999999998888998 79999888877543322223221 23332     233444332 6899999


Q ss_pred             cCCc--hHHhhhhhcC-C-CEEEEeccc
Q 022625          170 PSEG--FISNAGSLKG-V-QHVILLSQL  193 (294)
Q Consensus       170 ~~~~--~~~~~~~~~g-v-~r~V~vSs~  193 (294)
                      +.++  .+..+..... - .++|.++..
T Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~G~~  296 (374)
T 1cdo_A          269 CVGNVGVMRNALESCLKGWGVSVLVGWT  296 (374)
T ss_dssp             CSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred             CCCCHHHHHHHHHHhhcCCcEEEEEcCC
Confidence            9543  2333322222 2 589888754

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=96.38  E-value=0.0037  Score=55.27  Aligned_cols=64  Identities=11%  Similarity=-0.060  Sum_probs=47.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      |+|.|.|+ |.+|..+++.|++.|++|++..|++++.......++++.    .+   ..++++++|+||.+.
T Consensus         1 m~i~iiG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~----~~---~~~~~~~~Dvvi~~v   64 (296)
T 2gf2_A            1 MPVGFIGL-GNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVV----SS---PADVAEKADRIITML   64 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEEC----SS---HHHHHHHCSEEEECC
T ss_pred             CeEEEEec-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeec----CC---HHHHHhcCCEEEEeC
Confidence            47899996 999999999999999999999999887655443344321    23   234556788888874

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=96.38  E-value=0.028  Score=51.21  Aligned_cols=96  Identities=11%  Similarity=-0.047  Sum_probs=61.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCccchhhh--cCCCcEEeecCCCCHHHHH----HHh--cCCcEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMES--FGTYVESMAGDASNKKFLK----TAL--RGVRSI  167 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~-V~~~~R~~~~~~~~--~~~~v~~v~~D~~d~~~l~----~~l--~~~d~V  167 (294)
                      .++.+|||+|| |.+|...++.+...|.+ |+++.+++++....  +...+.....|-.+.+.+.    +..  +++|+|
T Consensus       178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv  256 (363)
T 3m6i_A          178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVA  256 (363)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEE
Confidence            46789999998 99999999888889997 88888888764322  2333333334433444333    333  368999


Q ss_pred             EEcCCch--HHhhhhhc-CCCEEEEeccc
Q 022625          168 ICPSEGF--ISNAGSLK-GVQHVILLSQL  193 (294)
Q Consensus       168 i~~~~~~--~~~~~~~~-gv~r~V~vSs~  193 (294)
                      |.+.++-  +..+.... .-.++|.++..
T Consensus       257 id~~g~~~~~~~~~~~l~~~G~iv~~G~~  285 (363)
T 3m6i_A          257 LECTGVESSIAAAIWAVKFGGKVFVIGVG  285 (363)
T ss_dssp             EECSCCHHHHHHHHHHSCTTCEEEECCCC
T ss_pred             EECCCChHHHHHHHHHhcCCCEEEEEccC
Confidence            9995542  22322221 22588888753

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.37  E-value=0.0039  Score=55.23  Aligned_cols=65  Identities=9%  Similarity=0.047  Sum_probs=48.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      .++|.|.|+ |.+|..++..|.+.|++|++++|++++.......++..    ..+   +.++++++|+||.+.
T Consensus         4 ~~~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~vi~~v   68 (301)
T 3cky_A            4 SIKIGFIGL-GAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQA----CEN---NQKVAAASDIIFTSL   68 (301)
T ss_dssp             CCEEEEECC-CTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEE----CSS---HHHHHHHCSEEEECC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCee----cCC---HHHHHhCCCEEEEEC
Confidence            478999996 99999999999999999999999987765543333432    123   334556788888884

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.34  E-value=0.0028  Score=56.96  Aligned_cols=95  Identities=15%  Similarity=0.128  Sum_probs=60.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCchH
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFI  175 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~~  175 (294)
                      ..++.+|+|+||+|.+|...++.+...|.+|++++++.+ ......-+.+. ..|..+.+.+.+.++++|+||.+.++-.
T Consensus       150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~-~~~~~~lGa~~-~i~~~~~~~~~~~~~g~D~v~d~~g~~~  227 (321)
T 3tqh_A          150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN-HAFLKALGAEQ-CINYHEEDFLLAISTPVDAVIDLVGGDV  227 (321)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH-HHHHHHHTCSE-EEETTTSCHHHHCCSCEEEEEESSCHHH
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch-HHHHHHcCCCE-EEeCCCcchhhhhccCCCEEEECCCcHH
Confidence            346889999999999999999999999999998875443 22111112221 2345444436666789999999965432


Q ss_pred             Hhhh-hhc-CCCEEEEecc
Q 022625          176 SNAG-SLK-GVQHVILLSQ  192 (294)
Q Consensus       176 ~~~~-~~~-gv~r~V~vSs  192 (294)
                      ...+ ... .-.++|.++.
T Consensus       228 ~~~~~~~l~~~G~iv~~g~  246 (321)
T 3tqh_A          228 GIQSIDCLKETGCIVSVPT  246 (321)
T ss_dssp             HHHHGGGEEEEEEEEECCS
T ss_pred             HHHHHHhccCCCEEEEeCC
Confidence            2221 111 1247777653

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=96.33  E-value=0.0075  Score=56.92  Aligned_cols=68  Identities=19%  Similarity=0.133  Sum_probs=52.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+.+|+|+|.|. |.||+.+++.|...|.+|++..+++.+.......+++++     +   +.++++.+|+|+.+.
T Consensus       243 ~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv-----~---LeElL~~ADIVv~at  310 (464)
T 3n58_A          243 VMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVV-----T---LDDAASTADIVVTTT  310 (464)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC-----C---HHHHGGGCSEEEECC
T ss_pred             CcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceec-----c---HHHHHhhCCEEEECC
Confidence            3578999999996 999999999999999999999888765433222344432     2   457888999999874

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.33  E-value=0.0062  Score=54.33  Aligned_cols=66  Identities=9%  Similarity=-0.057  Sum_probs=46.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..++|.|.|+ |.+|..+++.|++.|++|++.+|++++.......+......|+      .++++++|+||.+
T Consensus         6 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~------~e~~~~aDvvi~~   71 (303)
T 3g0o_A            6 TDFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASA------REFAGVVDALVIL   71 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSS------TTTTTTCSEEEEC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCH------HHHHhcCCEEEEE
Confidence            3578999986 9999999999999999999999998876544322222212222      2345667777776

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=96.32  E-value=0.0077  Score=56.61  Aligned_cols=68  Identities=15%  Similarity=0.069  Sum_probs=52.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+.+++|+|.|. |.||+.+++.|...|.+|++..+++.+.......++++.        .+.++++++|+|+.+.
T Consensus       216 ~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~--------~Leeal~~ADIVi~at  283 (435)
T 3gvp_A          216 MMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLV--------KLNEVIRQVDIVITCT  283 (435)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC--------CHHHHTTTCSEEEECS
T ss_pred             ceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEec--------cHHHHHhcCCEEEECC
Confidence            3568899999997 999999999999999999999998865433322333321        2567889999999983

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=96.32  E-value=0.0047  Score=56.25  Aligned_cols=85  Identities=18%  Similarity=0.134  Sum_probs=50.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEc--Cccchhhh--c-CCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCch
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK--DKRNAMES--F-GTYVESMAGDASNKKFLKTALRGVRSIICPSEGF  174 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R--~~~~~~~~--~-~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~  174 (294)
                      ++|.|.||+|.+|+.+++.|.++++.+..+..  +.+.....  + +..+.+...|   ++   . + ++|+||.+.+.+
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g~~i~v~~~~---~~---~-~-~~DvV~~a~g~~   72 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVEPLP---EG---P-L-PVDLVLASAGGG   72 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEETTEEEEEEECC---SS---C-C-CCSEEEECSHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEcCceEEEEeCC---hh---h-c-CCCEEEECCCcc
Confidence            47999999999999999999987765433321  11110000  1 1122333323   22   2 3 899999996644


Q ss_pred             ----HHhhhhhcCCCEEEEeccc
Q 022625          175 ----ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       175 ----~~~~~~~~gv~r~V~vSs~  193 (294)
                          .+....+.|+ ++|-.|+.
T Consensus        73 ~s~~~a~~~~~~G~-~vId~s~~   94 (331)
T 2yv3_A           73 ISRAKALVWAEGGA-LVVDNSSA   94 (331)
T ss_dssp             HHHHHHHHHHHTTC-EEEECSSS
T ss_pred             chHHHHHHHHHCCC-EEEECCCc
Confidence                3333455676 57777776

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.31  E-value=0.018  Score=52.78  Aligned_cols=94  Identities=10%  Similarity=0.003  Sum_probs=60.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCC-----HHHHHHHh-cCCcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN-----KKFLKTAL-RGVRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d-----~~~l~~~l-~~~d~Vi~  169 (294)
                      .++.+|+|+|+ |.+|...++.+...|+ +|+++++++++......-+.+.+ .|..+     .+.+.+.. .++|+||.
T Consensus       194 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~v~~~~~~g~Dvvid  271 (376)
T 1e3i_A          194 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDC-LNPRELDKPVQDVITELTAGGVDYSLD  271 (376)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEE-EccccccchHHHHHHHHhCCCccEEEE
Confidence            36789999996 9999999988888998 79999888877544322222221 23332     23344433 26899999


Q ss_pred             cCCc--hHHhhhhhcC-C-CEEEEecc
Q 022625          170 PSEG--FISNAGSLKG-V-QHVILLSQ  192 (294)
Q Consensus       170 ~~~~--~~~~~~~~~g-v-~r~V~vSs  192 (294)
                      +.++  .+..+..... - .++|.++.
T Consensus       272 ~~G~~~~~~~~~~~l~~~~G~iv~~G~  298 (376)
T 1e3i_A          272 CAGTAQTLKAAVDCTVLGWGSCTVVGA  298 (376)
T ss_dssp             SSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred             CCCCHHHHHHHHHHhhcCCCEEEEECC
Confidence            9543  2333332222 2 58888875

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.29  E-value=0.014  Score=54.29  Aligned_cols=96  Identities=9%  Similarity=0.003  Sum_probs=60.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCC---HHHHHHHhc--CCcEEEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTALR--GVRSIIC  169 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d---~~~l~~~l~--~~d~Vi~  169 (294)
                      ..++.+|+|+|| |.+|...++.+...|+ +|+++.+++++......-+.+.+ .|..+   .+.+.+...  ++|+||.
T Consensus       211 ~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~i~~~t~g~g~D~vid  288 (404)
T 3ip1_A          211 IRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHV-IDPTKENFVEAVLDYTNGLGAKLFLE  288 (404)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEE-ECTTTSCHHHHHHHHTTTCCCSEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEE-EcCCCCCHHHHHHHHhCCCCCCEEEE
Confidence            346789999998 9999999988888999 89988888876543221122221 23333   244455443  5899999


Q ss_pred             cCCch--HH----hhhhh--cCCCEEEEeccc
Q 022625          170 PSEGF--IS----NAGSL--KGVQHVILLSQL  193 (294)
Q Consensus       170 ~~~~~--~~----~~~~~--~gv~r~V~vSs~  193 (294)
                      +.++-  ..    +++.+  ..-.++|.++..
T Consensus       289 ~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~  320 (404)
T 3ip1_A          289 ATGVPQLVWPQIEEVIWRARGINATVAIVARA  320 (404)
T ss_dssp             CSSCHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred             CCCCcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence            95543  21    22200  223588888754

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.28  E-value=0.0021  Score=60.57  Aligned_cols=70  Identities=9%  Similarity=-0.053  Sum_probs=48.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEe-------------ecCCCCHHHHHHHhcCCcE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM-------------AGDASNKKFLKTALRGVRS  166 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v-------------~~D~~d~~~l~~~l~~~d~  166 (294)
                      |+|.|.|+ |.+|..++..|++.|++|++++|++++..........+.             .+.+.-..++.++++++|+
T Consensus         1 mkI~VIG~-G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv   79 (436)
T 1mv8_A            1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (436)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence            57999995 999999999999999999999999887655432211111             1111111223456778999


Q ss_pred             EEEc
Q 022625          167 IICP  170 (294)
Q Consensus       167 Vi~~  170 (294)
                      ||.+
T Consensus        80 viia   83 (436)
T 1mv8_A           80 SFIC   83 (436)
T ss_dssp             EEEC
T ss_pred             EEEE
Confidence            9988

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.27  E-value=0.018  Score=52.72  Aligned_cols=95  Identities=13%  Similarity=0.026  Sum_probs=60.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCC-----HHHHHHHh-cCCcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN-----KKFLKTAL-RGVRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d-----~~~l~~~l-~~~d~Vi~  169 (294)
                      .++.+|+|+|+ |.+|...++.+...|. +|+++++++++......-+.+.+ .|..+     .+.+.+.. .++|+||.
T Consensus       190 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~~g~D~vid  267 (374)
T 2jhf_A          190 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC-VNPQDYKKPIQEVLTEMSNGGVDFSFE  267 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceE-ecccccchhHHHHHHHHhCCCCcEEEE
Confidence            36789999995 9999999998888998 79999988877543322222221 23332     23344433 26899999


Q ss_pred             cCCc--hHHhhhhhcC-C-CEEEEeccc
Q 022625          170 PSEG--FISNAGSLKG-V-QHVILLSQL  193 (294)
Q Consensus       170 ~~~~--~~~~~~~~~g-v-~r~V~vSs~  193 (294)
                      +.++  .+..+..... - .++|.++..
T Consensus       268 ~~g~~~~~~~~~~~l~~~~G~iv~~G~~  295 (374)
T 2jhf_A          268 VIGRLDTMVTALSCCQEAYGVSVIVGVP  295 (374)
T ss_dssp             CSCCHHHHHHHHHHBCTTTCEEEECSCC
T ss_pred             CCCCHHHHHHHHHHhhcCCcEEEEeccC
Confidence            9543  2333322222 2 588888653

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.24  E-value=0.007  Score=51.10  Aligned_cols=40  Identities=5%  Similarity=0.001  Sum_probs=31.5

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR  134 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~  134 (294)
                      .....+++|.|.| .|.+|..++..|.+.|++|+++.|+++
T Consensus        14 ~~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~   53 (209)
T 2raf_A           14 NLYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ   53 (209)
T ss_dssp             ------CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred             ccccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            3456788999999 599999999999999999999988764

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.23  E-value=0.0038  Score=56.18  Aligned_cols=92  Identities=12%  Similarity=0.020  Sum_probs=55.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH--HHHHHHh-cCCcEEEEcCCch-HH
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK--KFLKTAL-RGVRSIICPSEGF-IS  176 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~--~~l~~~l-~~~d~Vi~~~~~~-~~  176 (294)
                      +|+|+||+|.+|...++.+...|++|+++++++++......-+.+.+ .|..+.  +.+.+.. .++|+||.+.++. +.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~  230 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEV-LAREDVMAERIRPLDKQRWAAAVDPVGGRTLA  230 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEE-EECC---------CCSCCEEEEEECSTTTTHH
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEE-EecCCcHHHHHHHhcCCcccEEEECCcHHHHH
Confidence            89999999999999999988999999999998776543322222221 244332  1222221 3679999985432 22


Q ss_pred             hhhhhc-CCCEEEEeccc
Q 022625          177 NAGSLK-GVQHVILLSQL  193 (294)
Q Consensus       177 ~~~~~~-gv~r~V~vSs~  193 (294)
                      .+.... .-.+++.++..
T Consensus       231 ~~~~~l~~~G~~v~~G~~  248 (328)
T 1xa0_A          231 TVLSRMRYGGAVAVSGLT  248 (328)
T ss_dssp             HHHHTEEEEEEEEECSCC
T ss_pred             HHHHhhccCCEEEEEeec
Confidence            222211 12478887654

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.23  E-value=0.0055  Score=56.23  Aligned_cols=68  Identities=10%  Similarity=-0.006  Sum_probs=51.2

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+.+|+|.|.|. |.||+.+++.|...|++|++..|++.+.......+++.+       +++.++++.+|+|+.+
T Consensus       160 ~~l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-------~~l~ell~~aDvV~l~  227 (351)
T 3jtm_A          160 YDLEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV-------EDLNEMLPKCDVIVIN  227 (351)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC-------SCHHHHGGGCSEEEEC
T ss_pred             ccccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc-------CCHHHHHhcCCEEEEC
Confidence            3578899999996 999999999999999999999988644322111123221       3467789999999987

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.22  E-value=0.014  Score=53.96  Aligned_cols=73  Identities=10%  Similarity=0.053  Sum_probs=53.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCC----HHHHHHHhc--CCcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN----KKFLKTALR--GVRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d----~~~l~~~l~--~~d~Vi~  169 (294)
                      .++.+|+|+|+ |.+|...++.+...|. +|+++++++++......-+.+++  |..+    .+.+.+...  ++|+||.
T Consensus       184 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~~~~~~~g~g~Dvvid  260 (398)
T 2dph_A          184 KPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETI--DLRNSAPLRDQIDQILGKPEVDCGVD  260 (398)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEE--ETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEE--cCCCcchHHHHHHHHhCCCCCCEEEE
Confidence            36789999997 9999999988888898 89999999887554433344433  4433    345555544  5899999


Q ss_pred             cCC
Q 022625          170 PSE  172 (294)
Q Consensus       170 ~~~  172 (294)
                      +.+
T Consensus       261 ~~g  263 (398)
T 2dph_A          261 AVG  263 (398)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            844

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.21  E-value=0.012  Score=53.97  Aligned_cols=95  Identities=12%  Similarity=0.019  Sum_probs=62.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCC----C-HHHHHHHhc-CCcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDAS----N-KKFLKTALR-GVRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~----d-~~~l~~~l~-~~d~Vi~  169 (294)
                      .++.+|+|+|| |.+|...++.+...|+ +|+++++++++......-+.+.+ .|..    + .+.+.++.. ++|+||.
T Consensus       192 ~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~i~~~~~gg~D~vid  269 (378)
T 3uko_A          192 EPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEF-VNPKDHDKPIQEVIVDLTDGGVDYSFE  269 (378)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEE-EccccCchhHHHHHHHhcCCCCCEEEE
Confidence            46789999998 9999999988888898 89999988887654433333321 2332    2 234444432 6899999


Q ss_pred             cCCc--hHHhhhhhcC--CCEEEEeccc
Q 022625          170 PSEG--FISNAGSLKG--VQHVILLSQL  193 (294)
Q Consensus       170 ~~~~--~~~~~~~~~g--v~r~V~vSs~  193 (294)
                      +.++  .+..+.....  -.++|.++..
T Consensus       270 ~~g~~~~~~~~~~~l~~g~G~iv~~G~~  297 (378)
T 3uko_A          270 CIGNVSVMRAALECCHKGWGTSVIVGVA  297 (378)
T ss_dssp             CSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred             CCCCHHHHHHHHHHhhccCCEEEEEccc
Confidence            8554  3333333222  2688888754

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.21  E-value=0.0078  Score=56.66  Aligned_cols=68  Identities=13%  Similarity=0.090  Sum_probs=53.3

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..+.+++|+|.|. |.||+.+++.|...|.+|++..+++.+.......+++..        ++.++++++|+|+.+.
T Consensus       207 ~~L~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~--------sL~eal~~ADVVilt~  274 (436)
T 3h9u_A          207 VMIAGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL--------LVEDVVEEAHIFVTTT  274 (436)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC--------CHHHHTTTCSEEEECS
T ss_pred             CcccCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec--------CHHHHHhhCCEEEECC
Confidence            4567899999996 999999999999999999999998866543322333332        4678899999999873

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.20  E-value=0.013  Score=53.72  Aligned_cols=92  Identities=12%  Similarity=0.089  Sum_probs=62.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc-------------------hhh------hcCC--CcEEe
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------AME------SFGT--YVESM  147 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~~~------~~~~--~v~~v  147 (294)
                      .+..++|+|.|+ |++|.+++..|+..|. ++.+++++.-.                   +..      ...+  .++.+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            445789999998 8899999999999996 77777775311                   000      0122  35566


Q ss_pred             ecCCCCHHHHHHHhcCCcEEEEcCCc------hHHhhhhhcCCCEEEEe
Q 022625          148 AGDASNKKFLKTALRGVRSIICPSEG------FISNAGSLKGVQHVILL  190 (294)
Q Consensus       148 ~~D~~d~~~l~~~l~~~d~Vi~~~~~------~~~~~~~~~gv~r~V~v  190 (294)
                      ..++++...+.+ ++++|+||.+.+.      .+.++|.+.++. +|+.
T Consensus       194 ~~~i~~~~~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p-~i~~  240 (353)
T 3h5n_A          194 ALNINDYTDLHK-VPEADIWVVSADHPFNLINWVNKYCVRANQP-YINA  240 (353)
T ss_dssp             ECCCCSGGGGGG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCC-EEEE
T ss_pred             ecccCchhhhhH-hccCCEEEEecCChHHHHHHHHHHHHHhCCC-EEEE
Confidence            677766554556 8899999998432      244667777765 4444

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=96.19  E-value=0.024  Score=51.54  Aligned_cols=71  Identities=11%  Similarity=0.082  Sum_probs=53.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCC-CCHHHHHHHhcCCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA-SNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~-~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ||+|+|.|+ |..|..++..+.+.|++|++++.+++.......  -+++..|. .|.+.+....+++|+|+...+
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~a--D~~~~~~~~~d~~~~~~~~~~~D~v~~~~~   72 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALIRNYA--DEFYCFDVIKEPEKLLELSKRVDAVLPVNE   72 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTTTTS--SEEEECCTTTCHHHHHHHHTSSSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChhHhhC--CEEEECCCCcCHHHHHHHhcCCCEEEECCC
Confidence            689999996 899999999999999999999887764332222  23445554 467777788889999886533

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=96.19  E-value=0.011  Score=46.81  Aligned_cols=85  Identities=16%  Similarity=-0.058  Sum_probs=52.9

Q ss_pred             CCCeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc-
Q 022625           98 ARDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-  173 (294)
Q Consensus        98 ~~~~vlVtGat---G~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-  173 (294)
                      ..++|+|.|++   |.+|..+++.|.+.|++|  ...++.+..... .++.++       .++.++-+.+|.++.+.+. 
T Consensus        12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v--~~vnp~~~~~~i-~G~~~~-------~sl~el~~~vDlavi~vp~~   81 (140)
T 1iuk_A           12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRV--LPVNPRFQGEEL-FGEEAV-------ASLLDLKEPVDILDVFRPPS   81 (140)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEE--EEECGGGTTSEE-TTEECB-------SSGGGCCSCCSEEEECSCHH
T ss_pred             CCCEEEEECCCCCCCChHHHHHHHHHHCCCEE--EEeCCCcccCcC-CCEEec-------CCHHHCCCCCCEEEEEeCHH
Confidence            35899999998   889999999999999984  455665321111 122222       1122223468988887332 


Q ss_pred             h---HHhhhhhcCCCEEEEecc
Q 022625          174 F---ISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       174 ~---~~~~~~~~gv~r~V~vSs  192 (294)
                      .   +.+.+.+.|++.+++.++
T Consensus        82 ~~~~v~~~~~~~gi~~i~~~~g  103 (140)
T 1iuk_A           82 ALMDHLPEVLALRPGLVWLQSG  103 (140)
T ss_dssp             HHTTTHHHHHHHCCSCEEECTT
T ss_pred             HHHHHHHHHHHcCCCEEEEcCC
Confidence            2   234455678988776544

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=96.18  E-value=0.011  Score=54.11  Aligned_cols=66  Identities=8%  Similarity=-0.109  Sum_probs=51.3

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+.+|+|.|.|- |.||+.+++.|...|++|++..|++.+.....  +++.+       +++.++++.+|+|+..
T Consensus       169 ~~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~~-------~~l~ell~~sDvV~l~  234 (345)
T 4g2n_A          169 MGLTGRRLGIFGM-GRIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIYH-------DTLDSLLGASDIFLIA  234 (345)
T ss_dssp             CCCTTCEEEEESC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEEC-------SSHHHHHHTCSEEEEC
T ss_pred             cccCCCEEEEEEe-ChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeEe-------CCHHHHHhhCCEEEEe
Confidence            4577899999996 99999999999999999999999864432221  23221       3467789999999987

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.16  E-value=0.0043  Score=54.72  Aligned_cols=69  Identities=13%  Similarity=0.110  Sum_probs=48.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---CC--CcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GT--YVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~--~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ...+++++|+|+ |++|+.++..|++.|++|+++.|+.+++.+..   +.  .+.  ..|+   +.+.+  .++|+||++
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~--~~~~---~~~~~--~~~DivIn~  187 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQ--AVSM---DSIPL--QTYDLVINA  187 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEE--EEEG---GGCCC--SCCSEEEEC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeE--EeeH---HHhcc--CCCCEEEEC
Confidence            346799999998 89999999999999999999999987654432   11  122  1222   11100  378999998


Q ss_pred             CC
Q 022625          171 SE  172 (294)
Q Consensus       171 ~~  172 (294)
                      ++
T Consensus       188 t~  189 (272)
T 1p77_A          188 TS  189 (272)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.16  E-value=0.014  Score=51.61  Aligned_cols=65  Identities=9%  Similarity=0.103  Sum_probs=50.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEEcCccchhhhcCC-CcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      +++|.|.|+ |.+|..+++.|++.|+   +|++.+|+++++...... ++...    .+   ..++++++|+||.+.
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~----~~---~~~~~~~aDvVilav   71 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTT----QD---NRQGALNADVVVLAV   71 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEE----SC---HHHHHSSCSEEEECS
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe----CC---hHHHHhcCCeEEEEe
Confidence            578999997 9999999999999998   999999999876654322 33321    22   345678899999883

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=96.16  E-value=0.0075  Score=54.74  Aligned_cols=66  Identities=14%  Similarity=0.134  Sum_probs=51.2

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+.+++|.|.|. |.||+.+++.|...|++|++..|++..... +.   ..     ....++.++++.+|+|+.+
T Consensus       136 ~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~~---~~-----~~~~~l~ell~~aDvV~l~  201 (324)
T 3hg7_A          136 QGLKGRTLLILGT-GSIGQHIAHTGKHFGMKVLGVSRSGRERAG-FD---QV-----YQLPALNKMLAQADVIVSV  201 (324)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCTT-CS---EE-----ECGGGHHHHHHTCSEEEEC
T ss_pred             cccccceEEEEEE-CHHHHHHHHHHHhCCCEEEEEcCChHHhhh-hh---cc-----cccCCHHHHHhhCCEEEEe
Confidence            3567899999996 999999999999999999999988743321 10   11     1235678889999999987

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.16  E-value=0.0079  Score=54.09  Aligned_cols=66  Identities=12%  Similarity=-0.040  Sum_probs=50.3

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+.+++|.|.|. |.||+.+++.|...|++|++..|++++. .....+++.     .+   +.++++++|+|+.+
T Consensus       138 ~~l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~-----~~---l~ell~~aDvV~l~  203 (307)
T 1wwk_A          138 IELEGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNEE-RAKEVNGKF-----VD---LETLLKESDVVTIH  203 (307)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEE-----CC---HHHHHHHCSEEEEC
T ss_pred             cccCCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hHhhcCccc-----cC---HHHHHhhCCEEEEe
Confidence            3567899999996 9999999999999999999999987652 111123332     12   45678889999987

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.15  E-value=0.01  Score=53.63  Aligned_cols=76  Identities=8%  Similarity=-0.006  Sum_probs=55.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---CCCcEE-eecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVES-MAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~v~~-v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ...+++++|.|++.-+|+.+++.|+..|.+|+++.|+..+..+..   ....+. .....++.+.+.+.++.+|+||.+.
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAt  253 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV  253 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECC
Confidence            678999999999778899999999999999999988855432221   111111 0011134578899999999999983

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.14  E-value=0.011  Score=50.71  Aligned_cols=73  Identities=15%  Similarity=0.116  Sum_probs=55.8

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhhhc-CCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESF-GTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~-~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ..++.+++|||.|| |.+|...++.|++.|++|+++..+... +..+. ..+++++..++.+     ..+.++|.||.++
T Consensus        26 fl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~-----~dL~~adLVIaAT   99 (223)
T 3dfz_A           26 MLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGE-----EDLLNVFFIVVAT   99 (223)
T ss_dssp             EECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCG-----GGSSSCSEEEECC
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCH-----hHhCCCCEEEECC
Confidence            44678999999998 899999999999999999999876543 22222 2357888777754     2477899999884


Q ss_pred             C
Q 022625          172 E  172 (294)
Q Consensus       172 ~  172 (294)
                      +
T Consensus       100 ~  100 (223)
T 3dfz_A          100 N  100 (223)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.14  E-value=0.018  Score=52.35  Aligned_cols=94  Identities=12%  Similarity=0.021  Sum_probs=58.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCC--C-HH---HHHHHh-cCCcEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDAS--N-KK---FLKTAL-RGVRSII  168 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~--d-~~---~l~~~l-~~~d~Vi  168 (294)
                      .++.+|+|+|+ |.+|...++.+...|+ +|+++++++++......-+.+. ..|..  + .+   .+.+.. .++|+||
T Consensus       170 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-vi~~~~~~~~~~~~~i~~~~~~g~D~vi  247 (356)
T 1pl8_A          170 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADL-VLQISKESPQEIARKVEGQLGCKPEVTI  247 (356)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSE-EEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE-EEcCcccccchHHHHHHHHhCCCCCEEE
Confidence            36789999996 9999999988888999 8999999887644332222221 12443  2 22   222222 4799999


Q ss_pred             EcCCc--hHHhhhhhc-CCCEEEEecc
Q 022625          169 CPSEG--FISNAGSLK-GVQHVILLSQ  192 (294)
Q Consensus       169 ~~~~~--~~~~~~~~~-gv~r~V~vSs  192 (294)
                      .+.++  .+..+.... .-.++|.++.
T Consensus       248 d~~g~~~~~~~~~~~l~~~G~iv~~G~  274 (356)
T 1pl8_A          248 ECTGAEASIQAGIYATRSGGTLVLVGL  274 (356)
T ss_dssp             ECSCCHHHHHHHHHHSCTTCEEEECSC
T ss_pred             ECCCChHHHHHHHHHhcCCCEEEEEec
Confidence            99543  222222221 2258888864

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=96.13  E-value=0.0068  Score=57.89  Aligned_cols=66  Identities=12%  Similarity=0.064  Sum_probs=49.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      .+.+|+++|||+ |.||+.+++.|...|++|++..+++.++.+.....+     |+.+.   .+++..+|+++.+
T Consensus       262 ~L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~-----dv~~l---ee~~~~aDvVi~a  327 (488)
T 3ond_A          262 MIAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQATMEGL-----QVLTL---EDVVSEADIFVTT  327 (488)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-----EECCG---GGTTTTCSEEEEC
T ss_pred             cccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCC-----ccCCH---HHHHHhcCEEEeC
Confidence            468999999998 599999999999999999999998866543322222     22232   3456678888876

>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1

Probab=96.13  E-value=0.021  Score=50.49  Aligned_cols=92  Identities=13%  Similarity=0.170  Sum_probs=62.3

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc-----chhhh-----------------------cCCCc-E
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-----NAMES-----------------------FGTYV-E  145 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~-----~~~~~-----------------------~~~~v-~  145 (294)
                      ..+.+|+|||.|+ |.+|...++.|++.|++|+++..+..     .....                       ...++ +
T Consensus         9 ~~l~~k~VLVVGg-G~va~rka~~Ll~~Ga~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~   87 (274)
T 1kyq_A            9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNEIYE   87 (274)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSCCCSE
T ss_pred             EEcCCCEEEEECC-cHHHHHHHHHHHhCCCEEEEEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccCCeeE
Confidence            4567899999997 89999999999999999999987543     11111                       11245 7


Q ss_pred             EeecCCCCHHHHHHHhc------CCcEEEEcCCch-----HHhhhhhc-CCCEEEEecc
Q 022625          146 SMAGDASNKKFLKTALR------GVRSIICPSEGF-----ISNAGSLK-GVQHVILLSQ  192 (294)
Q Consensus       146 ~v~~D~~d~~~l~~~l~------~~d~Vi~~~~~~-----~~~~~~~~-gv~r~V~vSs  192 (294)
                      ++..++.+.     .+.      ++|.||.+++..     +...|++. |++..|.+..
T Consensus        88 ~i~~~~~~~-----dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VNvvd  141 (274)
T 1kyq_A           88 YIRSDFKDE-----YLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVNVAD  141 (274)
T ss_dssp             EECSSCCGG-----GGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEETT
T ss_pred             EEcCCCCHH-----HHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEEECC
Confidence            777766532     244      889999885432     44455554 5566666543

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.11  E-value=0.017  Score=52.83  Aligned_cols=95  Identities=14%  Similarity=0.028  Sum_probs=59.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCCC-----HHHHHHHhc-CCcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN-----KKFLKTALR-GVRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~d-----~~~l~~~l~-~~d~Vi~  169 (294)
                      .++.+|||+|+ |.+|...++.+...|. +|+++++++++......-+.+.+ .|..+     .+.+.+... ++|+||.
T Consensus       189 ~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~v~~~~~~g~D~vid  266 (373)
T 2fzw_A          189 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC-INPQDFSKPIQEVLIEMTDGGVDYSFE  266 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceE-eccccccccHHHHHHHHhCCCCCEEEE
Confidence            46789999996 9999999988888898 79999888877543321122211 23332     233444332 6899999


Q ss_pred             cCCc--hHHhhhhhcC-C-CEEEEeccc
Q 022625          170 PSEG--FISNAGSLKG-V-QHVILLSQL  193 (294)
Q Consensus       170 ~~~~--~~~~~~~~~g-v-~r~V~vSs~  193 (294)
                      +.++  .+..+..... - .++|.++..
T Consensus       267 ~~g~~~~~~~~~~~l~~~~G~iv~~G~~  294 (373)
T 2fzw_A          267 CIGNVKVMRAALEACHKGWGVSVVVGVA  294 (373)
T ss_dssp             CSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred             CCCcHHHHHHHHHhhccCCcEEEEEecC
Confidence            9543  2333332222 2 588888753

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.11  E-value=0.02  Score=52.41  Aligned_cols=95  Identities=12%  Similarity=-0.005  Sum_probs=59.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCCC----C-HHHHHHHh-cCCcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDAS----N-KKFLKTAL-RGVRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~~----d-~~~l~~~l-~~~d~Vi~  169 (294)
                      .++.+|+|+|+ |.+|...++.+...|. +|+++++++++......-+.+.+ .|..    + .+.+.++. .++|+||.
T Consensus       190 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~i~~~t~gg~Dvvid  267 (373)
T 1p0f_A          190 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATEC-LNPKDYDKPIYEVICEKTNGGVDYAVE  267 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEE-EecccccchHHHHHHHHhCCCCCEEEE
Confidence            36789999996 9999999988888898 79999888877543322222221 2332    2 23344433 26899999


Q ss_pred             cCCc--hHHhhhhhcC-C-CEEEEeccc
Q 022625          170 PSEG--FISNAGSLKG-V-QHVILLSQL  193 (294)
Q Consensus       170 ~~~~--~~~~~~~~~g-v-~r~V~vSs~  193 (294)
                      +.++  .+..+..... - .++|.++..
T Consensus       268 ~~g~~~~~~~~~~~l~~~~G~iv~~G~~  295 (373)
T 1p0f_A          268 CAGRIETMMNALQSTYCGSGVTVVLGLA  295 (373)
T ss_dssp             CSCCHHHHHHHHHTBCTTTCEEEECCCC
T ss_pred             CCCCHHHHHHHHHHHhcCCCEEEEEccC
Confidence            9543  2333332222 2 588888753

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.09  E-value=0.0047  Score=55.20  Aligned_cols=63  Identities=11%  Similarity=-0.040  Sum_probs=50.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+.+++|.|.|. |.||+.+++.|...|++|++..|++.+...     ++       ..+++.++++.+|+|+.+
T Consensus       118 ~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~~-------~~~~l~ell~~aDiV~l~  180 (290)
T 3gvx_A          118 TLLYGKALGILGY-GGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----DV-------ISESPADLFRQSDFVLIA  180 (290)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----SE-------ECSSHHHHHHHCSEEEEC
T ss_pred             eeeecchheeecc-CchhHHHHHHHHhhCcEEEEEecccccccc-----cc-------ccCChHHHhhccCeEEEE
Confidence            3467899999996 999999999999999999999998755331     11       112456778899999987

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.08  E-value=0.0052  Score=54.39  Aligned_cols=65  Identities=14%  Similarity=0.034  Sum_probs=48.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      |+|.|.|+ |.+|..++..|.+.|++|.+++|++++.......++..    ..+   +.++++++|+||.+.+
T Consensus         6 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~vi~~v~   70 (299)
T 1vpd_A            6 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET----AST---AKAIAEQCDVIITMLP   70 (299)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE----CSS---HHHHHHHCSEEEECCS
T ss_pred             ceEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee----cCC---HHHHHhCCCEEEEECC
Confidence            68999995 99999999999999999999999987655433223332    123   3345667899998844

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.07  E-value=0.026  Score=51.74  Aligned_cols=95  Identities=14%  Similarity=0.003  Sum_probs=59.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHhc-CCcEEEEcCC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR-GVRSIICPSE  172 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l~-~~d~Vi~~~~  172 (294)
                      .++.+|+|+||+|.+|...++.+...|++|++++ ++++......-+.+.+ .|..+.   +.+.+... ++|+||.+.+
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v-i~~~~~~~~~~v~~~t~g~~d~v~d~~g  240 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEV-FDYRAPNLAQTIRTYTKNNLRYALDCIT  240 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEE-EETTSTTHHHHHHHHTTTCCCEEEESSC
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEE-EECCCchHHHHHHHHccCCccEEEECCC
Confidence            5688999999999999999999999999999887 5555433222222221 233332   34444433 4899999955


Q ss_pred             c-h-HHhhhhhc--CCCEEEEeccc
Q 022625          173 G-F-ISNAGSLK--GVQHVILLSQL  193 (294)
Q Consensus       173 ~-~-~~~~~~~~--gv~r~V~vSs~  193 (294)
                      + . +..+....  .-.++|.++..
T Consensus       241 ~~~~~~~~~~~l~~~~G~iv~~g~~  265 (371)
T 3gqv_A          241 NVESTTFCFAAIGRAGGHYVSLNPF  265 (371)
T ss_dssp             SHHHHHHHHHHSCTTCEEEEESSCC
T ss_pred             chHHHHHHHHHhhcCCCEEEEEecC
Confidence            4 2 22222211  23588888743

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.05  E-value=0.0066  Score=54.88  Aligned_cols=96  Identities=13%  Similarity=0.097  Sum_probs=60.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHhcCCcEEEEcCC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALRGVRSIICPSE  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l~~~d~Vi~~~~  172 (294)
                      ..++.+|+|+|+ |.+|...++.+...|++|+++++++++......-+.+.+ .|..+.   +.+.+...++|+||.+.+
T Consensus       164 ~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~~~g~~d~vid~~g  241 (340)
T 3s2e_A          164 TRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVA-VNARDTDPAAWLQKEIGGAHGVLVTAV  241 (340)
T ss_dssp             CCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEE-EeCCCcCHHHHHHHhCCCCCEEEEeCC
Confidence            346889999997 889999998888899999999998877554322222221 233332   334443447899998843


Q ss_pred             -c-hHHhhhhhc-CCCEEEEeccc
Q 022625          173 -G-FISNAGSLK-GVQHVILLSQL  193 (294)
Q Consensus       173 -~-~~~~~~~~~-gv~r~V~vSs~  193 (294)
                       + .+..+.... .-.+++.++..
T Consensus       242 ~~~~~~~~~~~l~~~G~iv~~G~~  265 (340)
T 3s2e_A          242 SPKAFSQAIGMVRRGGTIALNGLP  265 (340)
T ss_dssp             CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred             CHHHHHHHHHHhccCCEEEEeCCC
Confidence             2 222222211 12478877643

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=96.05  E-value=0.011  Score=56.56  Aligned_cols=90  Identities=11%  Similarity=0.094  Sum_probs=61.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC--c
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--G  173 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~--~  173 (294)
                      ...+++|+|.|+ |.||+.+++.|...|++|+++.+++.++......+++.     .+   +.++++++|+||.+.+  .
T Consensus       271 ~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~-----~~---l~e~l~~aDvVi~atgt~~  341 (494)
T 3ce6_A          271 LIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDV-----VT---VEEAIGDADIVVTATGNKD  341 (494)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-----CC---HHHHGGGCSEEEECSSSSC
T ss_pred             CCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEE-----ec---HHHHHhCCCEEEECCCCHH
Confidence            457899999997 99999999999999999999999987754433234442     22   2356789999998833  2


Q ss_pred             hHH-hhhhhcC-CCEEEEecccc
Q 022625          174 FIS-NAGSLKG-VQHVILLSQLS  194 (294)
Q Consensus       174 ~~~-~~~~~~g-v~r~V~vSs~~  194 (294)
                      .+. +.....+ -..++.++...
T Consensus       342 ~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          342 IIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             SBCHHHHHHSCTTCEEEECSSSG
T ss_pred             HHHHHHHHhcCCCcEEEEeCCCC
Confidence            222 2222222 24678887643

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.04  E-value=0.0085  Score=51.93  Aligned_cols=66  Identities=9%  Similarity=-0.008  Sum_probs=48.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCC-CcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      +++|.|.|+ |.+|+.+++.|.+.|++|.+.+|++++....... ++..    ..+   +.++++++|+||.+.+
T Consensus         3 ~m~i~iiG~-G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~Vi~~v~   69 (259)
T 2ahr_A            3 AMKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY----AMS---HQDLIDQVDLVILGIK   69 (259)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB----CSS---HHHHHHTCSEEEECSC
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe----eCC---HHHHHhcCCEEEEEeC
Confidence            479999995 9999999999999999999999998765443211 2221    223   3455678999999843

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=96.04  E-value=0.011  Score=46.78  Aligned_cols=83  Identities=7%  Similarity=0.155  Sum_probs=53.3

Q ss_pred             CCCeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc-
Q 022625           98 ARDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-  173 (294)
Q Consensus        98 ~~~~vlVtGat---G~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-  173 (294)
                      ..++|.|.|++   |.+|..+++.|.+.|++|..+.++.++.     .++.++       .++.++.+.+|+++.+.+. 
T Consensus        13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----~G~~~~-------~s~~el~~~vDlvii~vp~~   80 (138)
T 1y81_A           13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----EGLKCY-------RSVRELPKDVDVIVFVVPPK   80 (138)
T ss_dssp             -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----TTEECB-------SSGGGSCTTCCEEEECSCHH
T ss_pred             CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----CCeeec-------CCHHHhCCCCCEEEEEeCHH
Confidence            46899999997   8999999999999999976665543221     122221       1122333468999988332 


Q ss_pred             h---HHhhhhhcCCCEEEEecc
Q 022625          174 F---ISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       174 ~---~~~~~~~~gv~r~V~vSs  192 (294)
                      .   +.+.+.+.|++.++..++
T Consensus        81 ~v~~v~~~~~~~g~~~i~~~~~  102 (138)
T 1y81_A           81 VGLQVAKEAVEAGFKKLWFQPG  102 (138)
T ss_dssp             HHHHHHHHHHHTTCCEEEECTT
T ss_pred             HHHHHHHHHHHcCCCEEEEcCc
Confidence            2   222344578888777664

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.03  E-value=0.0057  Score=54.15  Aligned_cols=36  Identities=8%  Similarity=0.250  Sum_probs=29.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEE-EcCc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKAL-VKDK  133 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~-~R~~  133 (294)
                      .+++|.|.||+|.+|+.+++.+.+. +++++++ +|+.
T Consensus         6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A            6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            3579999999999999999999875 6788875 5553

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.03  E-value=0.011  Score=54.10  Aligned_cols=96  Identities=10%  Similarity=0.108  Sum_probs=61.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcE-EeecCCCC-HHHHHHHhc--CCcEEEEcC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVE-SMAGDASN-KKFLKTALR--GVRSIICPS  171 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~-~v~~D~~d-~~~l~~~l~--~~d~Vi~~~  171 (294)
                      ..++.+|+|+| +|.+|...++.+...|++|+++++++++......-+.+ ++.-+-.+ .+.+.+...  ++|+||.+.
T Consensus       187 ~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~  265 (363)
T 3uog_A          187 LRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIA  265 (363)
T ss_dssp             CCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEET
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECC
Confidence            34678999999 79999999998888999999999988765433211222 22212122 244555554  689999984


Q ss_pred             Cch-HH---hhhhhcCCCEEEEecccc
Q 022625          172 EGF-IS---NAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       172 ~~~-~~---~~~~~~gv~r~V~vSs~~  194 (294)
                      ++. +.   +.++..  .++|.++...
T Consensus       266 g~~~~~~~~~~l~~~--G~iv~~G~~~  290 (363)
T 3uog_A          266 GGAGLGQSLKAVAPD--GRISVIGVLE  290 (363)
T ss_dssp             TSSCHHHHHHHEEEE--EEEEEECCCS
T ss_pred             ChHHHHHHHHHhhcC--CEEEEEecCC
Confidence            432 22   222332  4788887644

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=96.03  E-value=0.0058  Score=55.49  Aligned_cols=66  Identities=15%  Similarity=0.084  Sum_probs=50.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+.+++|.|.|. |.||+.+++.|...|++|++..|++.+.... .   ..+.     ..++.++++.+|+|+.+
T Consensus       133 ~~l~gktvGIiGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-~---~~~~-----~~~l~ell~~aDvV~l~  198 (324)
T 3evt_A          133 STLTGQQLLIYGT-GQIGQSLAAKASALGMHVIGVNTTGHPADHF-H---ETVA-----FTATADALATANFIVNA  198 (324)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSCCCCTTC-S---EEEE-----GGGCHHHHHHCSEEEEC
T ss_pred             ccccCCeEEEECc-CHHHHHHHHHHHhCCCEEEEECCCcchhHhH-h---hccc-----cCCHHHHHhhCCEEEEc
Confidence            4567899999996 9999999999999999999999987653211 1   1111     23466788899999987

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.02  E-value=0.012  Score=56.29  Aligned_cols=90  Identities=12%  Similarity=-0.014  Sum_probs=61.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC--Cc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS--EG  173 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~--~~  173 (294)
                      .+.+++|+|.|. |.||+.+++.|...|++|++..|++.+..+....++++     .   ++.++++.+|+|+.+.  .+
T Consensus       274 ~L~GktVgIIG~-G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~-----~---~l~ell~~aDiVi~~~~t~~  344 (494)
T 3d64_A          274 MIAGKIAVVAGY-GDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRV-----V---TMEYAADKADIFVTATGNYH  344 (494)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEE-----C---CHHHHTTTCSEEEECSSSSC
T ss_pred             ccCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEe-----C---CHHHHHhcCCEEEECCCccc
Confidence            467899999996 99999999999999999999999987643322233432     1   3677899999999873  22


Q ss_pred             hH-HhhhhhcCC-CEEEEecccc
Q 022625          174 FI-SNAGSLKGV-QHVILLSQLS  194 (294)
Q Consensus       174 ~~-~~~~~~~gv-~r~V~vSs~~  194 (294)
                      .+ .+.....+. .-+|.+++..
T Consensus       345 lI~~~~l~~MK~gAilINvgrg~  367 (494)
T 3d64_A          345 VINHDHMKAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             SBCHHHHHHCCTTEEEEECSSSS
T ss_pred             ccCHHHHhhCCCCcEEEEcCCCc
Confidence            22 122222222 3466777644

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=96.01  E-value=0.035  Score=51.38  Aligned_cols=90  Identities=14%  Similarity=0.013  Sum_probs=53.2

Q ss_pred             CCeEEEEcCCChHHHHHHH-HHHHCC---CeEEEEEcC-ccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc
Q 022625           99 RDAVLVTDGDSDIGQMVIL-SLIVKR---TRIKALVKD-KRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~-~L~~~g---~~V~~~~R~-~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~  173 (294)
                      .++|.|.||||++|+++++ -|.++.   .++..+... ..+....+... ....-+..+.+.    +.++|+||.+.+.
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~-~~~v~~~~~~~~----~~~vDvvf~a~~~   78 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPSFAKN-ETTLKDATSIDD----LKKCDVIITCQGG   78 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSBCCTTCCS-CCBCEETTCHHH----HHTCSEEEECSCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCCHHHcCCC-ceEEEeCCChhH----hcCCCEEEECCCh
Confidence            4799999999999999999 555555   356555432 11111112211 122223444433    4789999999665


Q ss_pred             h----HHhhhhhcCCC-EEEEeccc
Q 022625          174 F----ISNAGSLKGVQ-HVILLSQL  193 (294)
Q Consensus       174 ~----~~~~~~~~gv~-r~V~vSs~  193 (294)
                      .    ++....+.|++ .+|=.|+.
T Consensus        79 ~~s~~~~~~~~~~G~k~~VID~ss~  103 (377)
T 3uw3_A           79 DYTNDVFPKLRAAGWNGYWIDAASS  103 (377)
T ss_dssp             HHHHHHHHHHHHTTCCSEEEECSST
T ss_pred             HHHHHHHHHHHHCCCCEEEEeCCcc
Confidence            4    23344567874 66666664

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.01  E-value=0.011  Score=56.43  Aligned_cols=66  Identities=14%  Similarity=0.006  Sum_probs=52.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      .+.+++|+|.|. |.||+.+++.|...|++|++..+++.+.......++++     .   ++.++++.+|+|+.+
T Consensus       254 ~l~GktVgIIG~-G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~-----~---~l~ell~~aDiVi~~  319 (479)
T 1v8b_A          254 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNV-----V---TLDEIVDKGDFFITC  319 (479)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEE-----C---CHHHHTTTCSEEEEC
T ss_pred             ccCCCEEEEEee-CHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEe-----c---CHHHHHhcCCEEEEC
Confidence            467899999996 99999999999999999999999987653333334432     1   366789999999988

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.00  E-value=0.0022  Score=54.70  Aligned_cols=67  Identities=6%  Similarity=-0.042  Sum_probs=48.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EEcCccchhhhcCC-CcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~-~~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      .+++|.|.| .|.+|..+++.|++.|++|++ ..|+++++...... ++....   .+.    +.++++|+||.+..
T Consensus        22 ~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~---~~~----~~~~~aDvVilavp   90 (220)
T 4huj_A           22 SMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA---VEL----KDALQADVVILAVP   90 (220)
T ss_dssp             GSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE---CCH----HHHTTSSEEEEESC
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc---ChH----HHHhcCCEEEEeCC
Confidence            467999999 599999999999999999999 88888776543211 122211   222    34678999998843

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.00  E-value=0.011  Score=52.90  Aligned_cols=66  Identities=3%  Similarity=-0.068  Sum_probs=49.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      .++|.|.|+ |.+|..++..|++.|++|+++.|++++.......++..    ..+   ..++++++|+||.+.+
T Consensus        30 ~~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~DvVi~av~   95 (316)
T 2uyy_A           30 DKKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARL----GRT---PAEVVSTCDITFACVS   95 (316)
T ss_dssp             SSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEE----CSC---HHHHHHHCSEEEECCS
T ss_pred             CCeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEE----cCC---HHHHHhcCCEEEEeCC
Confidence            478999996 99999999999999999999999987765433223332    122   3345677899998844

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=95.99  E-value=0.005  Score=55.83  Aligned_cols=94  Identities=15%  Similarity=0.126  Sum_probs=59.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCccchhhhcCCCcEEeecCCCC-HHHHHHHhc--CCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALR--GVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d-~~~l~~~l~--~~d~Vi~~~~  172 (294)
                      ++.+|+|+|| |.+|...++.+...  |++|+++++++++......-+.+.+ .|..+ .+.+.++..  ++|+||.+.+
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~g~g~D~vid~~g  247 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYV-SEMKDAESLINKLTDGLGASIAIDLVG  247 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEE-ECHHHHHHHHHHHHTTCCEEEEEESSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEE-eccccchHHHHHhhcCCCccEEEECCC
Confidence            6789999999 99999999888888  9999999998876443221122211 24333 333444332  6899999954


Q ss_pred             ch--HHhhhhhc-CCCEEEEeccc
Q 022625          173 GF--ISNAGSLK-GVQHVILLSQL  193 (294)
Q Consensus       173 ~~--~~~~~~~~-gv~r~V~vSs~  193 (294)
                      +-  +..+.... .-.++|.++..
T Consensus       248 ~~~~~~~~~~~l~~~G~iv~~g~~  271 (344)
T 2h6e_A          248 TEETTYNLGKLLAQEGAIILVGME  271 (344)
T ss_dssp             CHHHHHHHHHHEEEEEEEEECCCC
T ss_pred             ChHHHHHHHHHhhcCCEEEEeCCC
Confidence            32  22222211 12478887653

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=95.98  E-value=0.0089  Score=56.66  Aligned_cols=70  Identities=10%  Similarity=0.062  Sum_probs=49.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEe-------------ecCCCCHHHHHHHhcCCcE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM-------------AGDASNKKFLKTALRGVRS  166 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v-------------~~D~~d~~~l~~~l~~~d~  166 (294)
                      |+|.|.|+ |.+|..++..|++.|++|++++|++++..........+.             .+.+.-..++.++++++|+
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDv   81 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADI   81 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCE
Confidence            78999996 999999999999999999999999887554322111110             1111111234567889999


Q ss_pred             EEEc
Q 022625          167 IICP  170 (294)
Q Consensus       167 Vi~~  170 (294)
                      ||.+
T Consensus        82 Viia   85 (450)
T 3gg2_A           82 IFIA   85 (450)
T ss_dssp             EEEC
T ss_pred             EEEE
Confidence            9988

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=95.96  E-value=0.038  Score=50.97  Aligned_cols=89  Identities=15%  Similarity=0.085  Sum_probs=51.7

Q ss_pred             CeEEEEcCCChHHHHHHH-HHHHCC---CeEEEEEcCc-cchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCch
Q 022625          100 DAVLVTDGDSDIGQMVIL-SLIVKR---TRIKALVKDK-RNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF  174 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~-~L~~~g---~~V~~~~R~~-~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~  174 (294)
                      ++|.|.||||++|+++++ -|.++.   .++..+.... .+....+.. .....-+..+.+.    ++++|+||.+.+..
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~-~~~~~~~~~~~~~----~~~~Dvvf~a~~~~   75 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGK-DAGMLHDAFDIES----LKQLDAVITCQGGS   75 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCCSSS-CCCBCEETTCHHH----HTTCSEEEECSCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcCHHHhCC-CceEEEecCChhH----hccCCEEEECCChH
Confidence            579999999999999999 555555   3555554322 111111211 1112223334332    57999999996654


Q ss_pred             ----HHhhhhhcCCC-EEEEeccc
Q 022625          175 ----ISNAGSLKGVQ-HVILLSQL  193 (294)
Q Consensus       175 ----~~~~~~~~gv~-r~V~vSs~  193 (294)
                          ++....+.|++ .+|=.|+.
T Consensus        76 ~s~~~~~~~~~~G~k~~VID~ss~   99 (370)
T 3pzr_A           76 YTEKVYPALRQAGWKGYWIDAAST   99 (370)
T ss_dssp             HHHHHHHHHHHTTCCCEEEECSST
T ss_pred             HHHHHHHHHHHCCCCEEEEeCCch
Confidence                23334566774 56666664

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.95  E-value=0.0023  Score=56.72  Aligned_cols=38  Identities=11%  Similarity=0.037  Sum_probs=34.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchh
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM  137 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~  137 (294)
                      .++|.|.|+ |.+|..++..|++.|++|++.+|+++++.
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~   41 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALD   41 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHH
Confidence            478999997 99999999999999999999999987644

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=95.92  E-value=0.017  Score=52.87  Aligned_cols=87  Identities=15%  Similarity=0.139  Sum_probs=52.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEEcCcc--chhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKR--NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~R~~~--~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~  173 (294)
                      +++|.|.||||++|.++++.|.++.|   ++..+....+  +... +.. .+...-++.+     +.++++|+||.+.+.
T Consensus         1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~-~~~-~~~~~~~~~~-----~~~~~~Dvvf~a~~~   73 (344)
T 3tz6_A            1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA-FRG-QEIEVEDAET-----ADPSGLDIALFSAGS   73 (344)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE-ETT-EEEEEEETTT-----SCCTTCSEEEECSCH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee-ecC-CceEEEeCCH-----HHhccCCEEEECCCh
Confidence            46899999999999999998888754   4555543221  1111 111 1222222222     235789999999665


Q ss_pred             h----HHhhhhhcCCCEEEEeccc
Q 022625          174 F----ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       174 ~----~~~~~~~~gv~r~V~vSs~  193 (294)
                      .    .+....+.|+ ++|-.|+.
T Consensus        74 ~~s~~~a~~~~~~G~-~vID~Sa~   96 (344)
T 3tz6_A           74 AMSKVQAPRFAAAGV-TVIDNSSA   96 (344)
T ss_dssp             HHHHHHHHHHHHTTC-EEEECSST
T ss_pred             HHHHHHHHHHHhCCC-EEEECCCc
Confidence            4    2333455676 57777775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	294
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-09

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (130), Expect = 1e-09
 Identities = 22/187 (11%), Positives = 49/187 (26%), Gaps = 16/187 (8%)

Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161
           + +       G   +   +     +  LV+D              + GD      +   +
Sbjct: 6   IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTV 65

Query: 162 RGVRSIIC------PSEGFISN---------AGSLKGVQHVILLSQLSVYRGSGGIQALM 206
            G  ++I                        A    GV  V+  +   +      +   +
Sbjct: 66  AGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRL 125

Query: 207 KGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFI 266
           +            +L  SG+ Y  +    + + P         +G   +  +SK D    
Sbjct: 126 QAVTDDHIRM-HKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHF 184

Query: 267 CVEALES 273
            +  L +
Sbjct: 185 MLRCLTT 191

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	294
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.97
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.92
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.9
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.89
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.88
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.88
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.85
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.85
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.85
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.85
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.85
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.85
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.85
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.84
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.84
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.83
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.82
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.82
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.81
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.8
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.8
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.8
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.8
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.79
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.78
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.77
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.77
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.77
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.77
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.77
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.76
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.76
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.76
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.75
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.75
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.75
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.75
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.75
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.75
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.75
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.74
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.74
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.74
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.73
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.73
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.73
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.73
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.73
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.72
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.72
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.72
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.72
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.72
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.71
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.71
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.7
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.7
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.69
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.69
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.69
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.69
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.68
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.67
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.67
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.66
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.66
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.66
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.65
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.64
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.64
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.64
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.64
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.63
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.61
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.6
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.6
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.6
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.59
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.58
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.56
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.55
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.54
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.51
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.51
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.51
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.5
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.49
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.49
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.45
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.44
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.41
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.4
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.36
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.23
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.16
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.11
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.85
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.68
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.5
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.16
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.94
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.93
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.81
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.71
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.69
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.66
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.59
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.55
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.53
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.48
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.48
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.48
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.45
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.44
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.42
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.42
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.41
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.4
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.34
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.32
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.17
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.16
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.12
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.11
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.09
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.07
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.06
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.02
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.91
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.87
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.87
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.85
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.81
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.81
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.8
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.79
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.77
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.74
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.73
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.69
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.6
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.58
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.55
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.53
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.5
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.38
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.36
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.35
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.32
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.25
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.25
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.22
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.22
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.17
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.17
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.15
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.14
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.07
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.06
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.96
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.95
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.93
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	95.9
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.84
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.83
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.82
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.79
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	95.78
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.71
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	95.7
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	95.7
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.7
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.62
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	95.55
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.55
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	95.54
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	95.54
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.49
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.44
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	95.43
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.43
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	95.41
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.32
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.32
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.31
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.3
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.27
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.27
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.25
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.2
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.19
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.17
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.16
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.11
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.1
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.05
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.0
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.97
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.95
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.86
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.85
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.82
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	94.81
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.77
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	94.76
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.66
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.66
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.57
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	94.57
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	94.55
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.43
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	94.38
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.31
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.22
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	94.21
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.14
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.1
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	94.1
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	94.1
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.05
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	94.02
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.02
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	94.0
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.9
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	93.87
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	93.83
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.82
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.74
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.59
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	93.48
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.38
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	93.22
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	93.1
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	93.02
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.98
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.86
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.81
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	92.72
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	92.57
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	92.55
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	92.52
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.51
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.47
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.38
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	92.06
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.02
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.91
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	90.88
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.78
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	90.52
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	90.43
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	89.93
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	89.93
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	89.79
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	89.77
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	89.76
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	89.56
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	89.54
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	89.26
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	89.22
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	88.88
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	88.85
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	88.84
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	88.73
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	88.71
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	88.66
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	88.65
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	88.51
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	88.32
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	88.26
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	87.94
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	87.94
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	87.81
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	87.53
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	87.4
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	86.7
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	86.34
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	86.25
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	86.21
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	86.19
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	86.14
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	85.98
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	85.62
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	85.57
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	85.56
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	85.42
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	85.08
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	84.26
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	84.01
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	83.15
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	81.68
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	81.48
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	81.36
d1xk7a1	402	Crotonobetainyl-CoA:carnitine CoA-transferase, Cai	81.34
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	81.29
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.13
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	81.04
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	80.73
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	80.44
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	80.12
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	80.06

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.2e-30  Score=217.51  Aligned_cols=188  Identities=13%  Similarity=0.104  Sum_probs=157.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc---
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG---  173 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~---  173 (294)
                      +.+|+|+||||||+||++++++|+++|++|++++|+++++......+++++.+|++|.+.+.++++++|+|||+.+.   
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~   80 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND   80 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccCCc
Confidence            35899999999999999999999999999999999999877666678999999999999999999999999998221   


Q ss_pred             ------------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecCCC
Q 022625          174 ------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG  241 (294)
Q Consensus       174 ------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~  241 (294)
                                  .+.+++++++++|||++||..++......... .......+..+|+++++++++||+|||+.+.+++.
T Consensus        81 ~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~-~~~~~~~~~~~e~~l~~~~~~~tiirp~~~~~~~~  159 (205)
T d1hdoa_          81 LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPR-LQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPL  159 (205)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGG-GHHHHHHHHHHHHHHHHTCSEEEEECCSEEECCCC
T ss_pred             hhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcccccc-ccccchHHHHHHHHHHhcCCceEEEecceecCCCC
Confidence                        15677889999999999998776543322111 12234456678999999999999999999998887


Q ss_pred             CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEec
Q 022625          242 GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCE  285 (294)
Q Consensus       242 ~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~  285 (294)
                      .+.......+.....+|+++|+|++++.+|+++.+.|+.+.+..
T Consensus       160 ~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         160 TGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (205)
T ss_dssp             CSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             cccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence            77666666777788899999999999999999988899888764

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.92  E-value=1.3e-23  Score=179.09  Aligned_cols=189  Identities=23%  Similarity=0.352  Sum_probs=144.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe--EEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc--
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTR--IKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG--  173 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~--  173 (294)
                      .+++||||||||+||++++++|+++|++  |+.+.|++++.... ..+++++.+|+++.+.+.++++++|+|||+...  
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~   80 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTSAVP   80 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-cCCcEEEEeeeccccccccccccceeeEEEEeecc
Confidence            4789999999999999999999999965  66678888766543 357899999999999999999999999997210  


Q ss_pred             ---------------------------------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHH
Q 022625          174 ---------------------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESM  220 (294)
Q Consensus       174 ---------------------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~  220 (294)
                                                       .+...+.....+++.+.|+...+.+..+...+........+...+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (252)
T d2q46a1          81 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQY  160 (252)
T ss_dssp             EECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHH
T ss_pred             ccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccccccccchhhhhhhhhhh
Confidence                                             02233556788999999988877665554444333444445566777


Q ss_pred             HHhCCCCEEEEEccceecCCCCCcceeec----cCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 022625          221 LMASGIPYTIIRTGVLQNTPGGKQGFQFE----EGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       221 l~~~gl~~tivRPg~l~~~~~~~~~~~~~----~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                      ..+++++++++||+.+++...........    ......++||++|+|++++.+|+++...|++|+|++++
T Consensus       161 ~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~  231 (252)
T d2q46a1         161 LADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKP  231 (252)
T ss_dssp             HHHSSSCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECC
T ss_pred             hhcccccceeecceEEECCCcchhhhhhccCcccccCCCCeEEHHHHHHHHHHHhCCccccCcEEEEeeCC
Confidence            78899999999999998443332222222    12344678999999999999999988889999999864

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.7e-23  Score=179.73  Aligned_cols=183  Identities=13%  Similarity=0.098  Sum_probs=139.7

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ..+.+|+||||||||+||++++++|+++|.  +|++++|++.+........+++..+|+.+.+++.++++++|++||+.+
T Consensus        10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~   89 (232)
T d2bkaa1          10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLG   89 (232)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCC
T ss_pred             hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccccccccccccccccccccccc
Confidence            345678999999999999999999999994  899999988665444445788889999999999999999999999832


Q ss_pred             c-------------------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCC-EEEEE
Q 022625          173 G-------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIR  232 (294)
Q Consensus       173 ~-------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~-~tivR  232 (294)
                      .                   .++++|.+.++++||++|+..++.....  .|     ...|..+|.++.+.+++ ++|+|
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~~--~Y-----~~~K~~~E~~l~~~~~~~~~IlR  162 (232)
T d2bkaa1          90 TTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNF--LY-----LQVKGEVEAKVEELKFDRYSVFR  162 (232)
T ss_dssp             CCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSS--HH-----HHHHHHHHHHHHTTCCSEEEEEE
T ss_pred             ccccccchhhhhhhcccccceeeecccccCccccccCCccccccCccc--hh-----HHHHHHhhhccccccccceEEec
Confidence            1                   1556788899999999999988765443  23     22356789999998886 99999


Q ss_pred             ccceecCCCCCcc----------eeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecC
Q 022625          233 TGVLQNTPGGKQG----------FQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEI  286 (294)
Q Consensus       233 Pg~l~~~~~~~~~----------~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g  286 (294)
                      |+.+++ +.....          ..++.+......|+++|+|++++.++.++.. ++.+.+.+.
T Consensus       163 P~~i~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~~~~  224 (232)
T d2bkaa1         163 PGVLLC-DRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELLENK  224 (232)
T ss_dssp             CCEEEC-TTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEHH
T ss_pred             Cceeec-CCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEEcHH
Confidence            999984 332110          0112233345579999999999999987654 566777653

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=2e-22  Score=184.66  Aligned_cols=190  Identities=12%  Similarity=-0.009  Sum_probs=132.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc-----chhhh------cCCCcEEeecCCCCHHHHHHHhcCC--cE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-----NAMES------FGTYVESMAGDASNKKFLKTALRGV--RS  166 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~-----~~~~~------~~~~v~~v~~D~~d~~~l~~~l~~~--d~  166 (294)
                      |+|||||||||||++|+++|+++|++|++++|...     +....      ...+++++.+|++|.+.++++++++  |+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            78999999999999999999999999999998543     21111      2247899999999999999999865  99


Q ss_pred             EEEcCC----c------------------hHHhhhhhcCC---CEEEEecccccccCC-C-Cch---hccchhHH-HHHH
Q 022625          167 IICPSE----G------------------FISNAGSLKGV---QHVILLSQLSVYRGS-G-GIQ---ALMKGNAR-KLAE  215 (294)
Q Consensus       167 Vi~~~~----~------------------~~~~~~~~~gv---~r~V~vSs~~~~~~~-~-~~~---~~~~~~~~-~~~~  215 (294)
                      |||++.    +                  .+.+++++.++   .||||+||..+|+.. . +..   +..+..++ ..|.
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~  161 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL  161 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHH
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHH
Confidence            999821    0                  04456776655   479999998887421 1 110   11111112 2344


Q ss_pred             HHHHHHH----hCCCCEEEEEccceecCCC--------------------CCcceeeccCCCCCCCcCHHHHHHHHHHHh
Q 022625          216 QDESMLM----ASGIPYTIIRTGVLQNTPG--------------------GKQGFQFEEGCAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       216 ~ae~~l~----~~gl~~tivRPg~l~~~~~--------------------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL  271 (294)
                      .+|.+++    ..+++++++||+.++ +|.                    ......++.+.+..++++++|+|++++.++
T Consensus       162 ~~E~~~~~~~~~~~l~~~ilR~~~vy-Gp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~  240 (357)
T d1db3a_         162 YAYWITVNYRESYGMYACNGILFNHE-SPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML  240 (357)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEE-CTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCEEEEEecccc-CCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHH
Confidence            5555554    468999999999888 442                    111233456677788999999999999988


Q ss_pred             hCCCCCCcEEEEecCCc-cccc
Q 022625          272 ESIPQTGLIFEVCEISN-LCEQ  292 (294)
Q Consensus       272 ~~~~~~g~~~~v~~g~~-~~~e  292 (294)
                      +.+  .++.|++++|+. +++|
T Consensus       241 ~~~--~~~~yni~sg~~~s~~~  260 (357)
T d1db3a_         241 QQE--QPEDFVIATGVQYSVRQ  260 (357)
T ss_dssp             SSS--SCCCEEECCCCCEEHHH
T ss_pred             hCC--CCCeEEECCCCceehHH
Confidence            764  468999998865 4444

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.88  E-value=6e-22  Score=181.15  Aligned_cols=187  Identities=12%  Similarity=-0.027  Sum_probs=136.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc----
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----  173 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~----  173 (294)
                      .+|+||||||+||||++|+++|+++|++|++++|.............++..+|+.+.+.+.++++++|+|||++..    
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~~   93 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGM   93 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeecccccccc
Confidence            5788999999999999999999999999999987654432222245688899999999999999999999997311    


Q ss_pred             -------------------hHHhhhhhcCCCEEEEecccccccCCCC---------c---hhccchh-HHHHHHHHHHHH
Q 022625          174 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGG---------I---QALMKGN-ARKLAEQDESML  221 (294)
Q Consensus       174 -------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~---------~---~~~~~~~-~~~~~~~ae~~l  221 (294)
                                         .+.+++.+.+++|||++||..++.....         .   .+..+.. +-..|..+|.++
T Consensus        94 ~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~  173 (363)
T d2c5aa1          94 GFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELC  173 (363)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHH
T ss_pred             cccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHH
Confidence                               1455678899999999999887652110         0   0011111 122344566655


Q ss_pred             H----hCCCCEEEEEccceecCCC---------------------CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCC
Q 022625          222 M----ASGIPYTIIRTGVLQNTPG---------------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       222 ~----~~gl~~tivRPg~l~~~~~---------------------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      +    ..|++++++||+.++ ++.                     ......++.|.+...++|++|+++++..+++.+  
T Consensus       174 ~~~~~~~gl~~~ilR~~~vy-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~--  250 (363)
T d2c5aa1         174 KHYNKDFGIECRIGRFHNIY-GPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--  250 (363)
T ss_dssp             HHHHHHHCCEEEEEEECCEE-CTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS--
T ss_pred             HHHHHHhCCCEEEEEeeeEe-ccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCC--
Confidence            4    469999999999988 332                     111234455677788999999999999988764  


Q ss_pred             CCcEEEEecCC
Q 022625          277 TGLIFEVCEIS  287 (294)
Q Consensus       277 ~g~~~~v~~g~  287 (294)
                      .+++||++++.
T Consensus       251 ~~~~~ni~~~~  261 (363)
T d2c5aa1         251 FREPVNIGSDE  261 (363)
T ss_dssp             CCSCEEECCCC
T ss_pred             CCCeEEEecCC
Confidence            46799998874

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.88  E-value=4.3e-22  Score=176.58  Aligned_cols=196  Identities=12%  Similarity=0.104  Sum_probs=142.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch--------hhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--------MESFGTYVESMAGDASNKKFLKTALRGVRSIIC  169 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~--------~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~  169 (294)
                      .+++||||||||+||++++++|+++|++|++++|+....        ......+++++.+|+.|.+.+.+.+.+++++++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~   81 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   81 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence            357899999999999999999999999999999976432        112345799999999999999999999999998


Q ss_pred             cCCc-----------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceec
Q 022625          170 PSEG-----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN  238 (294)
Q Consensus       170 ~~~~-----------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~  238 (294)
                      +...           .+..++.+.+..++++.|+.+.+.................++.++.+..+.+++|+++||+.+++
T Consensus        82 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g  161 (312)
T d1qyda_          82 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAG  161 (312)
T ss_dssp             CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEHH
T ss_pred             hhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEeccceeec
Confidence            7211           14556777777788888887665432221111112233345677888888999999999998774


Q ss_pred             C--CC-----------CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEE-EecCC-cccccc
Q 022625          239 T--PG-----------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFE-VCEIS-NLCEQL  293 (294)
Q Consensus       239 ~--~~-----------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~-v~~g~-~~~~ei  293 (294)
                      .  +.           ......++.|+....+|+++|+|++++.++.++...++.++ +.+++ .+++|+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~  231 (312)
T d1qyda_         162 YFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEV  231 (312)
T ss_dssp             HHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHH
T ss_pred             CCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHH
Confidence            1  11           12223455677788899999999999999999887777654 44443 355443

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.85  E-value=2.7e-21  Score=169.99  Aligned_cols=194  Identities=14%  Similarity=0.110  Sum_probs=143.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh---------hcCCCcEEeecCCCCHHHHHHHhcCCcEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALRGVRSII  168 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~---------~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi  168 (294)
                      .+|+||||||||+||++++++|+++|++|++++|+......         ....+++++.+|+.+...+.+.+++++.++
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            46899999999999999999999999999999998754221         123578999999999999999999999999


Q ss_pred             EcCCc-------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecCCC
Q 022625          169 CPSEG-------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG  241 (294)
Q Consensus       169 ~~~~~-------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~  241 (294)
                      |....       .+.+++...+++++++.|+............+. ......+...+.++.+.+++++++||+.+++...
T Consensus        82 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g~~~  160 (307)
T d1qyca_          82 STVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPA-KSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFL  160 (307)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTH-HHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHT
T ss_pred             ecccccccchhhHHHHHHHHhccccceeeeccccccccccccccc-cccccccccccchhhccCCCceecccceecCCCc
Confidence            98332       255677888999999999876544332222211 1122234567788888999999999998773210


Q ss_pred             ------------CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEE-ecCC-ccccc
Q 022625          242 ------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEV-CEIS-NLCEQ  292 (294)
Q Consensus       242 ------------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v-~~g~-~~~~e  292 (294)
                                  ......++.++....+++++|+|++++.++.++...++.+++ .+++ .++.|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e  225 (307)
T d1qyca_         161 RSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNE  225 (307)
T ss_dssp             TTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHH
T ss_pred             cchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHH
Confidence                        122234556778889999999999999999988777766554 4433 34444

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.85  E-value=6.2e-21  Score=171.81  Aligned_cols=187  Identities=18%  Similarity=0.132  Sum_probs=132.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEE------EEcCc-----cchhhh-cCCCcEEeecCCCCHHHHHHHhcCCcEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKA------LVKDK-----RNAMES-FGTYVESMAGDASNKKFLKTALRGVRSI  167 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~------~~R~~-----~~~~~~-~~~~v~~v~~D~~d~~~l~~~l~~~d~V  167 (294)
                      |+||||||+|+||++|+++|+++|++|..      +++-.     ...... ....++++.+|+.+...........|+|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            68999999999999999999999986544      32211     111111 2247899999999999999999999999


Q ss_pred             EEcCCc----------------------hHHhhhhhcCCCEEEEecccccccCCCCc-----hhccchhHH-HHHHHHHH
Q 022625          168 ICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGNAR-KLAEQDES  219 (294)
Q Consensus       168 i~~~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~-----~~~~~~~~~-~~~~~ae~  219 (294)
                      +|++..                      .+.+++.+.++++||++||..++......     .+..+...+ ..|..+|.
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~  160 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL  160 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            998321                      14556788899999999999887532211     011111112 23445555


Q ss_pred             HHH----hCCCCEEEEEccceecCCCC----------------CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCc
Q 022625          220 MLM----ASGIPYTIIRTGVLQNTPGG----------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGL  279 (294)
Q Consensus       220 ~l~----~~gl~~tivRPg~l~~~~~~----------------~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~  279 (294)
                      +++    +.+++++++||+.++ ||..                +....++.|.+..+++|++|+|+++..+++++. .++
T Consensus       161 ~~~~~~~~~~~~~~~lR~~~vy-Gp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~-~~~  238 (322)
T d1r6da_         161 VARAYHRTYGLDVRITRCCNNY-GPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-AGE  238 (322)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEE-CTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-TTC
T ss_pred             HHHHHHHHhCCCEEEEEeeeEE-CcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC-CCC
Confidence            553    479999999999998 4441                111234567777899999999999999998754 478


Q ss_pred             EEEEecCCc
Q 022625          280 IFEVCEISN  288 (294)
Q Consensus       280 ~~~v~~g~~  288 (294)
                      +||+++++.
T Consensus       239 ~~ni~~~~~  247 (322)
T d1r6da_         239 IYHIGGGLE  247 (322)
T ss_dssp             EEEECCCCE
T ss_pred             eeEEeeccc
Confidence            999988753

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.2e-21  Score=176.34  Aligned_cols=181  Identities=13%  Similarity=0.079  Sum_probs=122.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-----CCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALRGVRSIICPSEG  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~  173 (294)
                      .|+||||||+||||++++++|+++|++|++++|......+...     ..+++...|+.     +.++.++|+|||++..
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~~~~~~d~VihlAa~   75 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV-----EPLYIEVDQIYHLASP   75 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTT-----SCCCCCCSEEEECCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHH-----HHHHcCCCEEEECccc
Confidence            4899999999999999999999999999999874322111111     23445555543     3456789999998321


Q ss_pred             ----------------------hHHhhhhhcCCCEEEEecccccccCCCC--c--------hhccchhHHH-HHHHHHHH
Q 022625          174 ----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I--------QALMKGNARK-LAEQDESM  220 (294)
Q Consensus       174 ----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~--------~~~~~~~~~~-~~~~ae~~  220 (294)
                                            .+.+++++.++ |+||+||..++.....  .        .++.+...+. .|..+|.+
T Consensus        76 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~  154 (312)
T d2b69a1          76 ASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETM  154 (312)
T ss_dssp             CSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHH
Confidence                                  14556777786 8999999988753211  0        0111222222 34455665


Q ss_pred             HH----hCCCCEEEEEccceecCCCC------------------CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCC
Q 022625          221 LM----ASGIPYTIIRTGVLQNTPGG------------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTG  278 (294)
Q Consensus       221 l~----~~gl~~tivRPg~l~~~~~~------------------~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g  278 (294)
                      ++    ..+++++++||+.++ ||+.                  .....++.|.+..+++|++|++++++.+++..  .+
T Consensus       155 ~~~~~~~~~~~~~~lR~~~vy-Gp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~--~~  231 (312)
T d2b69a1         155 CYAYMKQEGVEVRVARIFNTF-GPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN--VS  231 (312)
T ss_dssp             HHHHHHHHCCCEEEEEECCEE-CTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS--CC
T ss_pred             HHHHHHHhCCcEEEEEeeeEE-CCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc--cC
Confidence            54    469999999999998 4431                  11123356677789999999999999888653  46


Q ss_pred             cEEEEecCCc
Q 022625          279 LIFEVCEISN  288 (294)
Q Consensus       279 ~~~~v~~g~~  288 (294)
                      ..||+++++.
T Consensus       232 ~~~n~~~~~~  241 (312)
T d2b69a1         232 SPVNLGNPEE  241 (312)
T ss_dssp             SCEEESCCCE
T ss_pred             CceEecCCcc
Confidence            7899988754

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.85  E-value=3.5e-21  Score=175.09  Aligned_cols=199  Identities=8%  Similarity=-0.047  Sum_probs=135.2

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cC-CCcEEeecCCCCHHHHHHHhcCCc
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALRGVR  165 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~-~~v~~v~~D~~d~~~l~~~l~~~d  165 (294)
                      ....+||+||||||+||||++|+++|+++|++|++++|+.++....       .. .....+.+|+.|.+.+.+++.++|
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   85 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAA   85 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccch
Confidence            3455689999999999999999999999999999999987654321       11 234567899999999999999999


Q ss_pred             EEEEcCCc-------------------hHHhhhhhc-CCCEEEEecccccccCCC--Cch--------------------
Q 022625          166 SIICPSEG-------------------FISNAGSLK-GVQHVILLSQLSVYRGSG--GIQ--------------------  203 (294)
Q Consensus       166 ~Vi~~~~~-------------------~~~~~~~~~-gv~r~V~vSs~~~~~~~~--~~~--------------------  203 (294)
                      +|+|+...                   .+.+++.+. ++++|||+||..+.....  ...                    
T Consensus        86 ~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  165 (342)
T d1y1pa1          86 GVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP  165 (342)
T ss_dssp             EEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSC
T ss_pred             hhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccccccc
Confidence            99998221                   034455554 799999999975421100  000                    


Q ss_pred             ---hccchhHH-HHHHHHHH----HHHhC--CCCEEEEEccceecCCCC------------------CcceeeccCCCCC
Q 022625          204 ---ALMKGNAR-KLAEQDES----MLMAS--GIPYTIIRTGVLQNTPGG------------------KQGFQFEEGCAAN  255 (294)
Q Consensus       204 ---~~~~~~~~-~~~~~ae~----~l~~~--gl~~tivRPg~l~~~~~~------------------~~~~~~~~g~~~~  255 (294)
                         +..+...+ ..|..+|.    +.++.  +++++++||+.++ ||..                  +.......++...
T Consensus       166 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~-Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~  244 (342)
T d1y1pa1         166 ESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTI-GTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQ  244 (342)
T ss_dssp             TTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEE-CCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSE
T ss_pred             ccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceeccccee-CCCCCccccccchHHHHHHHHcCCcCcccCCccce
Confidence               00000111 12334444    44443  5778899999877 4321                  1111122344556


Q ss_pred             CCcCHHHHHHHHHHHhhCCCCCCcEEEEecCCcccccc
Q 022625          256 GSLSKEDAAFICVEALESIPQTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       256 ~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~~~~~ei  293 (294)
                      .++|++|+|++++.+++++...+..|...++..+++|+
T Consensus       245 ~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~ei  282 (342)
T d1y1pa1         245 YYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTV  282 (342)
T ss_dssp             EEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHH
T ss_pred             eeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHH
Confidence            78999999999999999988888887666667676664

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.85  E-value=1.1e-20  Score=173.44  Aligned_cols=186  Identities=12%  Similarity=0.064  Sum_probs=131.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc------hhhhc-CCCcEEeecCCCCHHHHHHHhc--CCcEEEEc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN------AMESF-GTYVESMAGDASNKKFLKTALR--GVRSIICP  170 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~------~~~~~-~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~  170 (294)
                      |+||||||+||||++|+++|++.|++|++..++...      ..... ..+++++.+|++|...+.++++  .+|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            689999999999999999999999987776654321      11111 2479999999999999999887  46999998


Q ss_pred             CCc----------------------hHHhhhhhc---------CCCEEEEecccccccCCCCc---------------hh
Q 022625          171 SEG----------------------FISNAGSLK---------GVQHVILLSQLSVYRGSGGI---------------QA  204 (294)
Q Consensus       171 ~~~----------------------~~~~~~~~~---------gv~r~V~vSs~~~~~~~~~~---------------~~  204 (294)
                      ++.                      .+.++|.+.         ++++||++||..++......               .+
T Consensus        81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~  160 (361)
T d1kewa_          81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence            321                      033444443         45699999999887532110               00


Q ss_pred             ccchhHH-HHHHHHHHHHHh----CCCCEEEEEccceecCCCC----------------CcceeeccCCCCCCCcCHHHH
Q 022625          205 LMKGNAR-KLAEQDESMLMA----SGIPYTIIRTGVLQNTPGG----------------KQGFQFEEGCAANGSLSKEDA  263 (294)
Q Consensus       205 ~~~~~~~-~~~~~ae~~l~~----~gl~~tivRPg~l~~~~~~----------------~~~~~~~~g~~~~~~Is~eDv  263 (294)
                      ..+...+ ..|..+|.++..    .+++++++||+.++ ||..                .....++.|.+.+.++|++|+
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vy-Gp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~  239 (361)
T d1kewa_         161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNY-GPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE-STTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceE-CcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHH
Confidence            1111112 235566666543    79999999999988 5542                112234567777889999999


Q ss_pred             HHHHHHHhhCCCCCCcEEEEecCC
Q 022625          264 AFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       264 A~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                      |+++..++++.. .+.+|||+++.
T Consensus       240 a~ai~~~~~~~~-~~~~~Ni~s~~  262 (361)
T d1kewa_         240 ARALHMVVTEGK-AGETYNIGGHN  262 (361)
T ss_dssp             HHHHHHHHHHCC-TTCEEEECCCC
T ss_pred             HHHHHHHHhcCC-CCCeEEECCCC
Confidence            999999998754 47899998875

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=1.7e-20  Score=170.08  Aligned_cols=192  Identities=18%  Similarity=0.134  Sum_probs=131.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-------hhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-------AMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP  170 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-------~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~  170 (294)
                      |+||||||+||||++|++.|+++|++|++++|-...       .......+++++++|++|.+.+.++++  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            679999999999999999999999999999873221       111234579999999999999999988  78999998


Q ss_pred             CC--c--------------------hHHhhhhhcCCCEEEEecccccccCCCCc-----h-hccchhHH-HHHHHHHHHH
Q 022625          171 SE--G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----Q-ALMKGNAR-KLAEQDESML  221 (294)
Q Consensus       171 ~~--~--------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~-----~-~~~~~~~~-~~~~~ae~~l  221 (294)
                      ++  .                    .+.+++++.++++||++||..++......     . ...+...+ ..|..+|.++
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~  160 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL  160 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHH
Confidence            32  1                    05567888999999999999887532110     0 11111111 2234455554


Q ss_pred             Hh-----CCCCEEEEEccceecCCCC--------------------------Cccee-ec------cCCCCCCCcCHHHH
Q 022625          222 MA-----SGIPYTIIRTGVLQNTPGG--------------------------KQGFQ-FE------EGCAANGSLSKEDA  263 (294)
Q Consensus       222 ~~-----~gl~~tivRPg~l~~~~~~--------------------------~~~~~-~~------~g~~~~~~Is~eDv  263 (294)
                      .+     .+++++++||+.++ ++..                          ...+. ++      .|.+...+++++|+
T Consensus       161 ~~~~~~~~~~~~~ilR~~~v~-G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~  239 (338)
T d1udca_         161 TDLQKAQPDWSIALLRYFNPV-GAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL  239 (338)
T ss_dssp             HHHHHHSTTCEEEEEEECEEE-CCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHH
T ss_pred             HHHHhhccCCeEEEEeeccEE-eccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeeh
Confidence            42     58999999999877 3210                          00011 11      13344568999999


Q ss_pred             HHHHHHHhh--CCCCCCcEEEEecCC-ccccc
Q 022625          264 AFICVEALE--SIPQTGLIFEVCEIS-NLCEQ  292 (294)
Q Consensus       264 A~~iv~aL~--~~~~~g~~~~v~~g~-~~~~e  292 (294)
                      +.++..+..  .....+++||++++. .++.|
T Consensus       240 ~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e  271 (338)
T d1udca_         240 ADGHVVAMEKLANKPGVHIYNLGAGVGNSVLD  271 (338)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEESCSSCEEHHH
T ss_pred             hhhccccccccccccCcceeeecCCCCCcHHH
Confidence            988877665  334556899998875 44444

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.85  E-value=1.7e-20  Score=170.03  Aligned_cols=195  Identities=14%  Similarity=0.032  Sum_probs=139.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-------hhhh----cCCCcEEeecCCCCHHHHHHHhcCCcE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-------AMES----FGTYVESMAGDASNKKFLKTALRGVRS  166 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-------~~~~----~~~~v~~v~~D~~d~~~l~~~l~~~d~  166 (294)
                      ..|+|||||||||||++|+++|+++|++|++++|....       ....    ....++++.+|+.|...+.....+.+.
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~   94 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY   94 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence            46899999999999999999999999999999873321       1111    114689999999999999999999999


Q ss_pred             EEEcCC--c--------------------hHHhhhhhcCCCEEEEecccccccCCCC--ch---hccchhH-HHHHHHHH
Q 022625          167 IICPSE--G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ---ALMKGNA-RKLAEQDE  218 (294)
Q Consensus       167 Vi~~~~--~--------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~---~~~~~~~-~~~~~~ae  218 (294)
                      ++|+..  .                    .+.++|.+.++++||++||..++.....  ..   +..+... -..|..+|
T Consensus        95 v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E  174 (341)
T d1sb8a_          95 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNE  174 (341)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHH
T ss_pred             cccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHH
Confidence            998721  1                    1556788899999999999988753211  10   0111111 12344555


Q ss_pred             HHHH----hCCCCEEEEEccceecCCC--------------------CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          219 SMLM----ASGIPYTIIRTGVLQNTPG--------------------GKQGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       219 ~~l~----~~gl~~tivRPg~l~~~~~--------------------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                      .++.    ..+++++++||+.++ ++.                    ......++.|.+..+++|++|+|.++..++..+
T Consensus       175 ~~~~~~~~~~~i~~~ilR~~~v~-G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~  253 (341)
T d1sb8a_         175 LYADVFSRCYGFSTIGLRYFNVF-GRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAG  253 (341)
T ss_dssp             HHHHHHHHHHCCCCEEEEECCEE-CTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHhCCCeEEEEeceee-ccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhcc
Confidence            5543    468999999999887 332                    111234456778889999999999999988765


Q ss_pred             C-CCCcEEEEecCC-cccccc
Q 022625          275 P-QTGLIFEVCEIS-NLCEQL  293 (294)
Q Consensus       275 ~-~~g~~~~v~~g~-~~~~ei  293 (294)
                      . ..+.+|++.+++ .++.||
T Consensus       254 ~~~~~~~~~~~~~~~~si~~i  274 (341)
T d1sb8a_         254 LDARNQVYNIAVGGRTSLNQL  274 (341)
T ss_dssp             GGGCSEEEEESCSCCEEHHHH
T ss_pred             ccccceeeeecccccchHHHH
Confidence            3 567899998864 444443

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.84  E-value=2.6e-20  Score=169.31  Aligned_cols=187  Identities=16%  Similarity=0.145  Sum_probs=132.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc-------chhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-------NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~-------~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      +|+|||||||||||++|+++|+++|++|.+++++..       ........+++++.+|+.|.+.+.+++.+++.|+|.+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a   81 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   81 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhh
Confidence            799999999999999999999999998777765421       1222344689999999999999999999999999982


Q ss_pred             Cc------------h----------HHhhhhhcCCCEEEEecccccccCCC--------------C---chhccchhHH-
Q 022625          172 EG------------F----------ISNAGSLKGVQHVILLSQLSVYRGSG--------------G---IQALMKGNAR-  211 (294)
Q Consensus       172 ~~------------~----------~~~~~~~~gv~r~V~vSs~~~~~~~~--------------~---~~~~~~~~~~-  211 (294)
                      ..            +          +.+++...+ .++|++||..++....              .   ..+..+...+ 
T Consensus        82 ~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~  160 (346)
T d1oc2a_          82 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  160 (346)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             hcccccchhhCcccceeeehHhHHhhhhhhcccc-ccccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence            21            0          334566667 4788888887764210              0   0011111112 


Q ss_pred             HHHHHHHHHH----HhCCCCEEEEEccceecCCC----------------CCcceeeccCCCCCCCcCHHHHHHHHHHHh
Q 022625          212 KLAEQDESML----MASGIPYTIIRTGVLQNTPG----------------GKQGFQFEEGCAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       212 ~~~~~ae~~l----~~~gl~~tivRPg~l~~~~~----------------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL  271 (294)
                      ..|..+|.++    +..+++++++||+.++ ||.                ......++.|.....+++++|+|++++.++
T Consensus       161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vy-Gp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~  239 (346)
T d1oc2a_         161 STKAASDLIVKAWVRSFGVKATISNCSNNY-GPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAIL  239 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEE-STTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeeccee-CCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHH
Confidence            2344556555    4479999999999998 443                122234566778889999999999999888


Q ss_pred             hCCCCCCcEEEEecCCc
Q 022625          272 ESIPQTGLIFEVCEISN  288 (294)
Q Consensus       272 ~~~~~~g~~~~v~~g~~  288 (294)
                      .++ ..+..|++.+++.
T Consensus       240 ~~~-~~~~~~~~~~~~~  255 (346)
T d1oc2a_         240 TKG-RMGETYLIGADGE  255 (346)
T ss_dssp             HHC-CTTCEEEECCSCE
T ss_pred             hhc-ccCcccccccccc
Confidence            764 4467888877653

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=5.6e-20  Score=166.42  Aligned_cols=192  Identities=15%  Similarity=0.061  Sum_probs=132.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchhhhc-CCCcEEeecCCCCHHHHH-HHhcCCcEEEEcCCc---
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLK-TALRGVRSIICPSEG---  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~-~~~v~~v~~D~~d~~~l~-~~l~~~d~Vi~~~~~---  173 (294)
                      |+||||||+||||++++++|+++| ++|+++++......... .++++++.+|+++.+.+. .+++++|+|||++.-   
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~   80 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence            689999999999999999999999 58999988665544333 358999999998875554 477889999998221   


Q ss_pred             -------------------hHHhhhhhcCCCEEEEecccccccCCCCc-----------hhc-cchhHH-HHHHHHHHHH
Q 022625          174 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----------QAL-MKGNAR-KLAEQDESML  221 (294)
Q Consensus       174 -------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~-----------~~~-~~~~~~-~~~~~ae~~l  221 (294)
                                         .+.+++.+.++ +++++||..++......           .+. .+...+ ..|..+|.++
T Consensus        81 ~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~  159 (342)
T d2blla1          81 IEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI  159 (342)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred             cccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCCCcchhhhcccchhhhh
Confidence                               04455677776 45677777665422110           000 111112 2355666666


Q ss_pred             Hh----CCCCEEEEEccceecCCC------------------------CCcceeeccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          222 MA----SGIPYTIIRTGVLQNTPG------------------------GKQGFQFEEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       222 ~~----~gl~~tivRPg~l~~~~~------------------------~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                      ..    .+++++++||+.++ ++.                        +.....++.|...++++|++|+|+++..++++
T Consensus       160 ~~~~~~~~~~~~i~r~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~  238 (342)
T d2blla1         160 WAYGEKEGLQFTLFRPFNWM-GPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN  238 (342)
T ss_dssp             HHHHHHHCCCEEEEEECSEE-CSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHC
T ss_pred             hhhhcccCceeEEeeccccc-cccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhh
Confidence            43    68999999999877 321                        11122345667778899999999999999987


Q ss_pred             C--CCCCcEEEEecCCc--ccccc
Q 022625          274 I--PQTGLIFEVCEISN--LCEQL  293 (294)
Q Consensus       274 ~--~~~g~~~~v~~g~~--~~~ei  293 (294)
                      +  ...+++||+++++.  ++.|+
T Consensus       239 ~~~~~~g~~~Nig~~~~~~t~~~l  262 (342)
T d2blla1         239 AGNRCDGEIINIGNPENEASIEEL  262 (342)
T ss_dssp             GGGTTTTEEEEECCTTSEEEHHHH
T ss_pred             ccccCCCeEEEEecccchhHHHHH
Confidence            5  35689999987654  54443

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.83  E-value=4.4e-20  Score=167.90  Aligned_cols=193  Identities=13%  Similarity=0.071  Sum_probs=139.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh--h-cCCCcEEeecCCCCH-HHHHHHhcCCcEEEEcCC-
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--S-FGTYVESMAGDASNK-KFLKTALRGVRSIICPSE-  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~--~-~~~~v~~v~~D~~d~-~~l~~~l~~~d~Vi~~~~-  172 (294)
                      ..|+|+||||||+||++++++|+++|++|++++|++++...  . ...+++++++|+.|. +.+..++.++|++++... 
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~   81 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   81 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence            46999999999999999999999999999999998876432  1 225799999999884 557889999999998722 


Q ss_pred             ---------chHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEEEEEccceecCCC--
Q 022625          173 ---------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG--  241 (294)
Q Consensus       173 ---------~~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~--  241 (294)
                               ..+.+++.+.|++++|+.||............   ......+...+.++.+.+++|+++||+.+++...  
T Consensus        82 ~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~vr~~~~~~~~~~~  158 (350)
T d1xgka_          82 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPA---VPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSL  158 (350)
T ss_dssp             TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCC---CTTTHHHHHHHHHHHTSSSCEEEEEECEEGGGCBSS
T ss_pred             ccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcccc---hhhhhhHHHHHHHHHhhccCceeeeeceeecccccc
Confidence                     12677888999999999988765443222111   1112234567888899999999999998764211  


Q ss_pred             -----------CCcc--eeeccCCCCCCCcCH-HHHHHHHHHHhhCCC--CCCcEEEEecCCcccccc
Q 022625          242 -----------GKQG--FQFEEGCAANGSLSK-EDAAFICVEALESIP--QTGLIFEVCEISNLCEQL  293 (294)
Q Consensus       242 -----------~~~~--~~~~~g~~~~~~Is~-eDvA~~iv~aL~~~~--~~g~~~~v~~g~~~~~ei  293 (294)
                                 .+..  .....++....+++. +|+++++..++.++.  ..|++|+++++..++.||
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g~~~T~~ei  226 (350)
T d1xgka_         159 PYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQV  226 (350)
T ss_dssp             SCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHH
T ss_pred             ccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeCCcCCHHHH
Confidence                       0000  011134455566775 799999999997643  578999999877676664

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.82  E-value=1.4e-19  Score=162.00  Aligned_cols=185  Identities=12%  Similarity=-0.032  Sum_probs=127.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch-----hhhc-CCCcEEeecCCCCHHHHHHHhcCC--cEEEEcC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MESF-GTYVESMAGDASNKKFLKTALRGV--RSIICPS  171 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~-----~~~~-~~~v~~v~~D~~d~~~l~~~l~~~--d~Vi~~~  171 (294)
                      |+|||||||||||++|+++|+++||+|++++|.....     .... ..+++++.+|++|...+.+.+...  ++++|+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            7899999999999999999999999999999975431     1111 246899999999999999887653  6777762


Q ss_pred             Cc----------------------hHHhhhhhcCCC-EEEEecccccccCCCCc--h---hccc-hhHHHHHHHHHHHH-
Q 022625          172 EG----------------------FISNAGSLKGVQ-HVILLSQLSVYRGSGGI--Q---ALMK-GNARKLAEQDESML-  221 (294)
Q Consensus       172 ~~----------------------~~~~~~~~~gv~-r~V~vSs~~~~~~~~~~--~---~~~~-~~~~~~~~~ae~~l-  221 (294)
                      ..                      .+.+++++.+++ +|++.||..++......  .   +..+ ..+...|..+|..+ 
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  160 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV  160 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence            10                      034567777755 77777777665321110  0   0011 11122344455554 


Q ss_pred             ---HhCCCCEEEEEccceecCCCC--------------------CcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCC
Q 022625          222 ---MASGIPYTIIRTGVLQNTPGG--------------------KQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTG  278 (294)
Q Consensus       222 ---~~~gl~~tivRPg~l~~~~~~--------------------~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g  278 (294)
                         ...+++++++||+.++ +|..                    ...+.++.|.+..+++|++|+|++++.+++++.  +
T Consensus       161 ~~~~~~~~~~~~lr~~~vy-Gp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~--~  237 (321)
T d1rpna_         161 NYRESFGLHASSGILFNHE-SPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK--A  237 (321)
T ss_dssp             HHHHHHCCCEEEEEECCEE-CTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS--C
T ss_pred             HHHhhcCCcEEEEEEeccc-CCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC--c
Confidence               3478999999999887 4421                    112334566677789999999999999998763  4


Q ss_pred             cEEEEecCC
Q 022625          279 LIFEVCEIS  287 (294)
Q Consensus       279 ~~~~v~~g~  287 (294)
                      ..|++++++
T Consensus       238 ~~~ni~~~~  246 (321)
T d1rpna_         238 DDYVVATGV  246 (321)
T ss_dssp             CCEEECCSC
T ss_pred             CCceecccc
Confidence            679998774

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=3.2e-19  Score=161.38  Aligned_cols=184  Identities=12%  Similarity=-0.004  Sum_probs=127.4

Q ss_pred             CeE-EEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-----hhhh-------cCCCcEEeecCCCCHHHHHHHhcC--C
Q 022625          100 DAV-LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES-------FGTYVESMAGDASNKKFLKTALRG--V  164 (294)
Q Consensus       100 ~~v-lVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~-------~~~~v~~v~~D~~d~~~l~~~l~~--~  164 (294)
                      |+| |||||+||||++|+++|+++||+|++++|..+.     ....       ....++++.+|++|.+.+.+++.+  .
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            567 999999999999999999999999999996542     1111       123689999999999999999865  4


Q ss_pred             cEEEEcCCc----------------------hHHhhhhhcCC---CEEEEecccccccCCC--Cc---hhccchhHH-HH
Q 022625          165 RSIICPSEG----------------------FISNAGSLKGV---QHVILLSQLSVYRGSG--GI---QALMKGNAR-KL  213 (294)
Q Consensus       165 d~Vi~~~~~----------------------~~~~~~~~~gv---~r~V~vSs~~~~~~~~--~~---~~~~~~~~~-~~  213 (294)
                      ++++|....                      .+.+++++.++   ++||++||..+|....  +.   .++.+..++ ..
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s  160 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA  160 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence            688876221                      03455666665   4899999998875321  11   111111122 23


Q ss_pred             HHHHHHHHH----hCCCCEEEEEccceecCCC--------------------CCcceeeccCCCCCCCcCHHHHHHHHHH
Q 022625          214 AEQDESMLM----ASGIPYTIIRTGVLQNTPG--------------------GKQGFQFEEGCAANGSLSKEDAAFICVE  269 (294)
Q Consensus       214 ~~~ae~~l~----~~gl~~tivRPg~l~~~~~--------------------~~~~~~~~~g~~~~~~Is~eDvA~~iv~  269 (294)
                      |.++|.++.    ..+++++++||+.++ +|.                    ......++.+.+..++++++|++.++..
T Consensus       161 K~~aE~~~~~~~~~~~~~~~ilr~~~vy-Gp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~  239 (347)
T d1t2aa_         161 KLYAYWIVVNFREAYNLFAVNGILFNHE-SPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWL  239 (347)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEE-CTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEeccee-CCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHH
Confidence            456666654    368999999999988 442                    1222344566777889999999999999


Q ss_pred             HhhCCCCCCcEEEEecC
Q 022625          270 ALESIPQTGLIFEVCEI  286 (294)
Q Consensus       270 aL~~~~~~g~~~~v~~g  286 (294)
                      ++.+...  +.|++..+
T Consensus       240 ~~~~~~~--~~~~~~~~  254 (347)
T d1t2aa_         240 MLQNDEP--EDFVIATG  254 (347)
T ss_dssp             HHHSSSC--CCEEECCS
T ss_pred             HhhcCCC--ccceeccc
Confidence            9987532  45555554

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.81  E-value=2.8e-19  Score=164.99  Aligned_cols=194  Identities=18%  Similarity=0.125  Sum_probs=128.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC-------------c---cc-------hhhhcCCCcEEeecCCCCHH
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-------------K---RN-------AMESFGTYVESMAGDASNKK  155 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~-------------~---~~-------~~~~~~~~v~~v~~D~~d~~  155 (294)
                      ||+|||||||||||++|+++|+++||+|++++.-             .   ..       ........++++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            6899999999999999999999999999998510             0   00       11112357899999999999


Q ss_pred             HHHHHhcCC--cEEEEcCCc-------------------------hHHhhhhhcCCC-EEEEecccccccCCCCc-----
Q 022625          156 FLKTALRGV--RSIICPSEG-------------------------FISNAGSLKGVQ-HVILLSQLSVYRGSGGI-----  202 (294)
Q Consensus       156 ~l~~~l~~~--d~Vi~~~~~-------------------------~~~~~~~~~gv~-r~V~vSs~~~~~~~~~~-----  202 (294)
                      .+.++++++  |+|||+++-                         .+.+++++.+++ ++++.||..++......     
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~  160 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY  160 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence            999999854  999997320                         034557777765 56777776665422110     


Q ss_pred             h-------------hccchhHH-HHHHHHHHHH----HhCCCCEEEEEccceecCCCCC---------------------
Q 022625          203 Q-------------ALMKGNAR-KLAEQDESML----MASGIPYTIIRTGVLQNTPGGK---------------------  243 (294)
Q Consensus       203 ~-------------~~~~~~~~-~~~~~ae~~l----~~~gl~~tivRPg~l~~~~~~~---------------------  243 (294)
                      .             +..+...+ ..|..+|.++    ++.+++++++||+.++ ++...                     
T Consensus       161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~  239 (393)
T d1i24a_         161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVY-GVKTDETEMHEELRNRLDYDAVFGTA  239 (393)
T ss_dssp             EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE-CSCCTTGGGSGGGCCCCCCSTTTCCH
T ss_pred             ccccccccccccccccccccHHHHHhhhhcccccccccccceeeeeccccccc-CCCccccccccccccccccccccccc
Confidence            0             01111112 2344555554    4579999999999988 33210                     


Q ss_pred             ------------cceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEe--cCCcccccc
Q 022625          244 ------------QGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVC--EISNLCEQL  293 (294)
Q Consensus       244 ------------~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~--~g~~~~~ei  293 (294)
                                  ....++.+.+...++|++|++.+++.+++++...+..+.+.  +...++.|+
T Consensus       240 i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el  303 (393)
T d1i24a_         240 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNEL  303 (393)
T ss_dssp             HHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHH
T ss_pred             hhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHH
Confidence                        11123456666789999999999999999877766554433  334444443

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.80  E-value=4.3e-19  Score=161.21  Aligned_cols=193  Identities=16%  Similarity=0.093  Sum_probs=128.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-------hhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-------AMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP  170 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-------~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~  170 (294)
                      |.||||||+||||++|+++|+++|++|+++++-...       .......+++++.+|++|.+.++++++  ++|+|||+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            789999999999999999999999999998763221       122234579999999999999999887  77999998


Q ss_pred             CCc----------------------hHHhhhhhcCCCEEEEecccccccCCCC------c---hhccchh-HHHHHHHHH
Q 022625          171 SEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG------I---QALMKGN-ARKLAEQDE  218 (294)
Q Consensus       171 ~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~------~---~~~~~~~-~~~~~~~ae  218 (294)
                      ++.                      .+.+++++.+++|||++||..++.....      .   .+..+.. +...|..+|
T Consensus        82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E  161 (347)
T d1z45a2          82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE  161 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHH
Confidence            321                      1455688899999999999988753211      0   1111111 222355666


Q ss_pred             HHHHh------CCCCEEEEEccceecC-CC------C------------------Cc-ceeeccC------CCCCCCcCH
Q 022625          219 SMLMA------SGIPYTIIRTGVLQNT-PG------G------------------KQ-GFQFEEG------CAANGSLSK  260 (294)
Q Consensus       219 ~~l~~------~gl~~tivRPg~l~~~-~~------~------------------~~-~~~~~~g------~~~~~~Is~  260 (294)
                      .++++      .+++++++||+.+++. +.      .                  .. ...++.+      .....+++.
T Consensus       162 ~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~  241 (347)
T d1z45a2         162 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV  241 (347)
T ss_dssp             HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred             HHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeee
Confidence            66543      5799999999977621 11      0                  00 0011121      122346677


Q ss_pred             HHHHHHHHHHhhC------CCCCCcEEEEecCC-ccccc
Q 022625          261 EDAAFICVEALES------IPQTGLIFEVCEIS-NLCEQ  292 (294)
Q Consensus       261 eDvA~~iv~aL~~------~~~~g~~~~v~~g~-~~~~e  292 (294)
                      .|.+.+++.++..      ....+++||+++++ .++.|
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e  280 (347)
T d1z45a2         242 VDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFE  280 (347)
T ss_dssp             HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHH
T ss_pred             ecccccccccccccccccccccccccceecCCCcccHHH
Confidence            8888888877653      23456899998764 34444

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.80  E-value=8.6e-19  Score=152.77  Aligned_cols=192  Identities=14%  Similarity=0.094  Sum_probs=137.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      .+.+|+++||||+++||++++++|+++|++|++..|+++++.+.   .+....++.+|++|+++++++++       .+|
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH   82 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCe
Confidence            35789999999999999999999999999999999998875543   34568889999999988877664       569


Q ss_pred             EEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHH
Q 022625          166 SIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL  213 (294)
Q Consensus       166 ~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~  213 (294)
                      ++||+++.     +                         +...+++.+-.+||++||..+..+......|..+|+  ..+
T Consensus        83 ilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l  162 (244)
T d1nffa_          83 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGL  162 (244)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHH
Confidence            99998321     0                         122355566689999999988777666666755543  223


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      .+.....+...||+++.|.||++........ ..........-+..++|+|+++++++.+..  ..|+++.|.+|-.
T Consensus       163 tk~lA~el~~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~~  238 (244)
T d1nffa_         163 TKSTALELGPSGIRVNSIHPGLVKTPMTDWV-PEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTV  238 (244)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCSGGGTTS-CTTCSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhcccCEEEEEEeeCCccChhHhhh-hHHHHhccccCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCCee
Confidence            3444445567899999999998762211100 000001112335789999999999886543  5799999988753

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=7.4e-19  Score=159.29  Aligned_cols=189  Identities=18%  Similarity=0.121  Sum_probs=126.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc------c-------hhhhcCCCcEEeecCCCCHHHHHHHhcCC-
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR------N-------AMESFGTYVESMAGDASNKKFLKTALRGV-  164 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~------~-------~~~~~~~~v~~v~~D~~d~~~l~~~l~~~-  164 (294)
                      .|+|||||||||||++|+++|+++|++|+++++-..      .       ........++++.+|++|.+.+.+++.+. 
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence            479999999999999999999999999999975211      1       11123457999999999999999988766 


Q ss_pred             -cEEEEcCC--c--------------------hHHhhhhhcCCCEEEEecccccccCCCCchh------ccchhH-HHHH
Q 022625          165 -RSIICPSE--G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQA------LMKGNA-RKLA  214 (294)
Q Consensus       165 -d~Vi~~~~--~--------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~------~~~~~~-~~~~  214 (294)
                       ++++|+++  +                    .+.+++++.++++|+++||..++........      ..+..+ ...+
T Consensus        82 ~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k  161 (346)
T d1ek6a_          82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK  161 (346)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred             cccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHH
Confidence             56777632  1                    1455678889999999999887653221100      001111 1123


Q ss_pred             HHHHHHH----Hh-CCCCEEEEEccceecCCCC--------------------------Cccee-------eccCCCCCC
Q 022625          215 EQDESML----MA-SGIPYTIIRTGVLQNTPGG--------------------------KQGFQ-------FEEGCAANG  256 (294)
Q Consensus       215 ~~ae~~l----~~-~gl~~tivRPg~l~~~~~~--------------------------~~~~~-------~~~g~~~~~  256 (294)
                      ..+|..+    +. .+++++++||+.++ ++..                          .....       ...|.+..+
T Consensus       162 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rd  240 (346)
T d1ek6a_         162 FFIEEMIRDLCQADKTWNAVLLRYFNPT-GAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD  240 (346)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEEEECEEE-CCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred             HHHHHHHHHHHHhccCCceEEEeeccee-ccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEe
Confidence            3344333    33 58999999999877 3210                          00000       112333456


Q ss_pred             CcCHHHHHHHHHHHhhC--CCCCCcEEEEecCCc
Q 022625          257 SLSKEDAAFICVEALES--IPQTGLIFEVCEISN  288 (294)
Q Consensus       257 ~Is~eDvA~~iv~aL~~--~~~~g~~~~v~~g~~  288 (294)
                      ++|++|+|.++..++..  ....+++||++++..
T Consensus       241 fi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~  274 (346)
T d1ek6a_         241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTG  274 (346)
T ss_dssp             EEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCC
T ss_pred             EEEEEeccchhhhhccccccccCceEEEeCCCCc
Confidence            89999999999887543  345568999998754

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.80  E-value=4.5e-19  Score=150.27  Aligned_cols=163  Identities=15%  Similarity=0.109  Sum_probs=111.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHh-cCCcEEEEcCCc--
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-RGVRSIICPSEG--  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l-~~~d~Vi~~~~~--  173 (294)
                      .|+||||||||+||++++++|+++|+  +|++++|++....    +.++   .+..|..++.+.+ ..+|+||++.+.  
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~----~~~~---~~~~d~~~~~~~~~~~~d~vi~~~g~~~   74 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH----PRLD---NPVGPLAELLPQLDGSIDTAFCCLGTTI   74 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC----TTEE---CCBSCHHHHGGGCCSCCSEEEECCCCCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc----cccc---ccccchhhhhhccccchheeeeeeeeec
Confidence            48999999999999999999999997  6777777653211    2233   3444444444433 457999997321  


Q ss_pred             ------------------hHHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCC-EEEEEcc
Q 022625          174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIRTG  234 (294)
Q Consensus       174 ------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~-~tivRPg  234 (294)
                                        .+.+++++.++++|+++|+.+++.....  .     +...|..+|.++++.+++ |+|+||+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~~--~-----y~~~K~~~E~~l~~~~~~~~~I~Rp~  147 (212)
T d2a35a1          75 KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSI--F-----YNRVKGELEQALQEQGWPQLTIARPS  147 (212)
T ss_dssp             HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSS--H-----HHHHHHHHHHHHTTSCCSEEEEEECC
T ss_pred             cccccccccccchhhhhhhccccccccccccccccccccccccccc--c-----hhHHHHHHhhhccccccccceeeCCc
Confidence                              1556788999999999999887654332  2     223456789999988875 9999999


Q ss_pred             ceecCCCCCcceeecc-------CCCCCCCcCHHHHHHHHHHHhhCCCC
Q 022625          235 VLQNTPGGKQGFQFEE-------GCAANGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       235 ~l~~~~~~~~~~~~~~-------g~~~~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      .++ ++..........       ....+..|+++|+|++++.++.++..
T Consensus       148 ~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~~  195 (212)
T d2a35a1         148 LLF-GPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEGK  195 (212)
T ss_dssp             SEE-STTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred             cee-CCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCCC
Confidence            998 443221110000       01123458999999999999987654

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.79  E-value=1.6e-18  Score=159.46  Aligned_cols=193  Identities=16%  Similarity=0.133  Sum_probs=127.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEEc---Cc------cchhh--------------hcCCCcEEeecCCCCH
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVK---DK------RNAME--------------SFGTYVESMAGDASNK  154 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~-~g~~V~~~~R---~~------~~~~~--------------~~~~~v~~v~~D~~d~  154 (294)
                      +|+||||||+||||++|+++|++ .|++|+++++   ..      +....              .....+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            57999999999999999999986 6899999864   10      00000              0113578999999999


Q ss_pred             HHHHHHhc---CCcEEEEcCCc----------------------hHHhhhhhcCCCEEEEecccccccCCCCc-------
Q 022625          155 KFLKTALR---GVRSIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-------  202 (294)
Q Consensus       155 ~~l~~~l~---~~d~Vi~~~~~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~-------  202 (294)
                      +.++++++   ++|+|||++..                      .+.+++++.++++++++|+...+......       
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence            99998885   67999998321                      03456788999999999988765422110       


Q ss_pred             -----hhccchh-HHHHHHHHHHHHH----hCCCCEEEEEccceecCCCCCcc---------------------------
Q 022625          203 -----QALMKGN-ARKLAEQDESMLM----ASGIPYTIIRTGVLQNTPGGKQG---------------------------  245 (294)
Q Consensus       203 -----~~~~~~~-~~~~~~~ae~~l~----~~gl~~tivRPg~l~~~~~~~~~---------------------------  245 (294)
                           ....+.. +...|..+|.+++    ..|++++++||+.++ |+.....                           
T Consensus       162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vy-G~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~  240 (383)
T d1gy8a_         162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNAC-GAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ  240 (383)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE-CCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-
T ss_pred             ccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceee-ccCccccccccccccchhHHHHHHHHHhhccccc
Confidence                 0011111 1223444555544    479999999999988 4431100                           


Q ss_pred             -------------e-ee------ccCCCCCCCcCHHHHHHHHHHHhhCC--------CCCCcEEEEecCC-ccccc
Q 022625          246 -------------F-QF------EEGCAANGSLSKEDAAFICVEALESI--------PQTGLIFEVCEIS-NLCEQ  292 (294)
Q Consensus       246 -------------~-~~------~~g~~~~~~Is~eDvA~~iv~aL~~~--------~~~g~~~~v~~g~-~~~~e  292 (294)
                                   . .+      +.|.+..+++|++|+|++++.++...        ...+.+||+++++ .++.|
T Consensus       241 ~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~e  316 (383)
T d1gy8a_         241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVRE  316 (383)
T ss_dssp             ----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHH
T ss_pred             cchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHH
Confidence                         0 00      12344457899999999999988642        2346899998774 44443

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.78  E-value=1.3e-18  Score=156.73  Aligned_cols=191  Identities=10%  Similarity=-0.049  Sum_probs=123.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-----hhhh-------cCCCcEEeecCCCCHHHHHHHhc--CC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES-------FGTYVESMAGDASNKKFLKTALR--GV  164 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~-------~~~~v~~v~~D~~d~~~l~~~l~--~~  164 (294)
                      .|++||||||||||++|+++|+++||+|++++|..+.     ....       ....++++.+|+++.+.+.+.++  ++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            4899999999999999999999999999999996432     1111       12357889999999999998886  56


Q ss_pred             cEEEEcCCch----------------------HHhhhhh-----cCCCEEEEecccccccCCCCc----hhccchhHHH-
Q 022625          165 RSIICPSEGF----------------------ISNAGSL-----KGVQHVILLSQLSVYRGSGGI----QALMKGNARK-  212 (294)
Q Consensus       165 d~Vi~~~~~~----------------------~~~~~~~-----~gv~r~V~vSs~~~~~~~~~~----~~~~~~~~~~-  212 (294)
                      |+|||++...                      +.++++.     ....++++.||...+......    .+..+...+. 
T Consensus        81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~  160 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA  160 (339)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred             chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhH
Confidence            9999983210                      2222322     234567777776654322111    0111111111 


Q ss_pred             HHHHHHHHH----HhCCCCEEEEEccceecCCCC--------------------CcceeeccCCCCCCCcCHHHHHHHHH
Q 022625          213 LAEQDESML----MASGIPYTIIRTGVLQNTPGG--------------------KQGFQFEEGCAANGSLSKEDAAFICV  268 (294)
Q Consensus       213 ~~~~ae~~l----~~~gl~~tivRPg~l~~~~~~--------------------~~~~~~~~g~~~~~~Is~eDvA~~iv  268 (294)
                      .|..+|.++    +..+++++++||+.++ ||..                    .....++.+.+..++++++|+|+++.
T Consensus       161 sK~~~E~~~~~~~~~~~~~~~ilR~~~vy-Gp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~  239 (339)
T d1n7ha_         161 SKCAAHWYTVNYREAYGLFACNGILFNHE-SPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMW  239 (339)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEE-CTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEEcccc-CCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHH
Confidence            233445443    4579999999999988 4531                    11223345666778999999999999


Q ss_pred             HHhhCCCCCCcEEEEecCCcccc
Q 022625          269 EALESIPQTGLIFEVCEISNLCE  291 (294)
Q Consensus       269 ~aL~~~~~~g~~~~v~~g~~~~~  291 (294)
                      .+++++.. +..+...+...+..
T Consensus       240 ~~~~~~~~-~~~~~~~~~~~s~~  261 (339)
T d1n7ha_         240 LMLQQEKP-DDYVVATEEGHTVE  261 (339)
T ss_dssp             HHHTSSSC-CEEEECCSCEEEHH
T ss_pred             HHHhcCCC-Cccccccccccccc
Confidence            99988644 33343344444443

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=8.9e-19  Score=152.52  Aligned_cols=191  Identities=14%  Similarity=0.137  Sum_probs=137.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      +.+|+++||||+++||++++++|+++|++|++..|+++++.+.   ++.+...+.+|++|+++++++++       .+|+
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            5789999999999999999999999999999999998775543   34567889999999988877664       5699


Q ss_pred             EEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHHH
Q 022625          167 IICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA  214 (294)
Q Consensus       167 Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~  214 (294)
                      +||+++.     +                         +...+++.+-.+||++||..+..+......|..+|.  ..+.
T Consensus        82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt  161 (243)
T d1q7ba_          82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFS  161 (243)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHH
Confidence            9998321     0                         222355666789999999988776666666655543  2233


Q ss_pred             HHHHHHHHhCCCCEEEEEccceecCC----CCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          215 EQDESMLMASGIPYTIIRTGVLQNTP----GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       215 ~~ae~~l~~~gl~~tivRPg~l~~~~----~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      +.....+...|++++.|.||++....    .......+.......-+..++|+|.++++++.+..  ..|+++.+.+|-
T Consensus       162 ~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         162 KSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCe
Confidence            44445556689999999999875211    00000011111222345689999999999986544  579999998874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=5.8e-18  Score=147.35  Aligned_cols=194  Identities=14%  Similarity=0.058  Sum_probs=138.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHHhcC---CcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRG---VRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~~---~d~Vi~~  170 (294)
                      .+.||+++||||+++||++++++|+++|++|+++.|+++++.+...  .+++.+.+|++|.+.++++++.   +|++||+
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn   83 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence            4689999999999999999999999999999999999887655432  4688899999999999988875   4999997


Q ss_pred             CCc-----h-------------------------HHh-hhhhcCCCEEEEecccccccCCCCchhccchhH--HHHHHHH
Q 022625          171 SEG-----F-------------------------ISN-AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQD  217 (294)
Q Consensus       171 ~~~-----~-------------------------~~~-~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~~a  217 (294)
                      ++.     +                         +.. ..++.+..++|++||..+..+......|..+|.  ..+.+..
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~l  163 (244)
T d1pr9a_          84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVM  163 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHHHHHHH
Confidence            221     0                         111 233445679999999988776666666655443  2233444


Q ss_pred             HHHHHhCCCCEEEEEccceecCCC----CCc-ce-eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCCcc
Q 022625          218 ESMLMASGIPYTIIRTGVLQNTPG----GKQ-GF-QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEISNL  289 (294)
Q Consensus       218 e~~l~~~gl~~tivRPg~l~~~~~----~~~-~~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~~~  289 (294)
                      ...+...||+++.|.||.+.....    ... .. .+.......-+.+++|+|.++++++.+..  ..|+++.+.+|-..
T Consensus       164 A~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~A  243 (244)
T d1pr9a_         164 ALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             HHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcCCcEEEECccHhh
Confidence            444566899999999998762111    100 00 01111222346789999999999886544  57999999888543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.77  E-value=2.9e-18  Score=149.93  Aligned_cols=194  Identities=16%  Similarity=0.157  Sum_probs=137.9

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-----
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      ...+.+|+++||||+++||++++++|+++|++|++..|+++++.+.      .+.++..+.+|++|+++++++++     
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            3456789999999999999999999999999999999998765432      23468899999999988877664     


Q ss_pred             --CCcEEEEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 --GVRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 --~~d~Vi~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                        .+|++||+.+.             +                 +...+++.+-.+||++||..+..+......|..+|.
T Consensus        85 ~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKa  164 (251)
T d2c07a1          85 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKA  164 (251)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             cCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHH
Confidence              56999997221             0                 222356667789999999988776666666655543


Q ss_pred             --HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEE
Q 022625          211 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFE  282 (294)
Q Consensus       211 --~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~  282 (294)
                        ..+.+.....+...||+++.|.||++.........    ..+.......-+..++|+|.++++++.+..  ..|+++.
T Consensus       165 al~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~  244 (251)
T d2c07a1         165 GVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFV  244 (251)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEE
Confidence              22344444556678999999999997632211100    011111222345689999999999886544  4789999


Q ss_pred             EecCC
Q 022625          283 VCEIS  287 (294)
Q Consensus       283 v~~g~  287 (294)
                      |.+|-
T Consensus       245 vDGG~  249 (251)
T d2c07a1         245 IDGGL  249 (251)
T ss_dssp             ESTTS
T ss_pred             ECCCc
Confidence            98774

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.77  E-value=2.2e-18  Score=151.01  Aligned_cols=191  Identities=14%  Similarity=0.071  Sum_probs=135.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---CCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      ++.+|+++||||+++||++++++|+++|++|++..|+++++.+..   +..+.++++|++|+++++++++       .+|
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCcc
Confidence            367999999999999999999999999999999999988765432   3468899999999988877664       569


Q ss_pred             EEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHH
Q 022625          166 SIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL  213 (294)
Q Consensus       166 ~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~  213 (294)
                      ++||+++.     +                         +...+++.+-.+||++||..+..+......|..+|.  ..+
T Consensus        82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~l  161 (254)
T d1hdca_          82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGL  161 (254)
T ss_dssp             EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHH
Confidence            99998321     0                         222355667789999999988777666666755543  223


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCC----CCCcceeeccCCCCCCC--cCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTP----GGKQGFQFEEGCAANGS--LSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~----~~~~~~~~~~g~~~~~~--Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                      .+.....+...|++++.|.||++....    ........ ....+.+.  ..++|||.++++++.+..  ..|+++.|.+
T Consensus       162 t~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~-~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDG  240 (254)
T d1hdca_         162 SKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGN-YPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDG  240 (254)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTS-CTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHH-HhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCC
Confidence            344444456689999999999875210    00000000 01111222  358999999999886543  5799999988


Q ss_pred             CC
Q 022625          286 IS  287 (294)
Q Consensus       286 g~  287 (294)
                      |-
T Consensus       241 G~  242 (254)
T d1hdca_         241 GW  242 (254)
T ss_dssp             TT
T ss_pred             Cc
Confidence            73

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.77  E-value=9.9e-18  Score=146.13  Aligned_cols=192  Identities=13%  Similarity=0.037  Sum_probs=133.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchh----hhcCCCcEEeecCCCCHHHHHHHhc-------CC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESFGTYVESMAGDASNKKFLKTALR-------GV  164 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~----~~~~~~v~~v~~D~~d~~~l~~~l~-------~~  164 (294)
                      .+.+|+++||||+++||+++++.|+++|++|++..|++.+..    +..+..+..+.+|++|+++++++++       .+
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999999875422    1234578899999999988877653       56


Q ss_pred             cEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HH
Q 022625          165 RSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK  212 (294)
Q Consensus       165 d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~  212 (294)
                      |++||+++.     +                         +...+++.+-.++|++||..+..+......|..+|.  ..
T Consensus        82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~  161 (247)
T d2ew8a1          82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIG  161 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHH
Confidence            999998321     0                         222356667789999999988777666666755543  22


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCCCc-----ceeeccC-CCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEe
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-----GFQFEEG-CAANGSLSKEDAAFICVEALESIP--QTGLIFEVC  284 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-----~~~~~~g-~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~  284 (294)
                      +.+.....+...|++++.|.||++........     ....... ....-+..++|+|.++++++.+..  ..|+++.|.
T Consensus       162 ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~i~vD  241 (247)
T d2ew8a1         162 FTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVD  241 (247)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             HHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEEC
Confidence            33444455567899999999998752211100     0001011 111234578999999999886544  479999998


Q ss_pred             cCC
Q 022625          285 EIS  287 (294)
Q Consensus       285 ~g~  287 (294)
                      +|-
T Consensus       242 GG~  244 (247)
T d2ew8a1         242 GGM  244 (247)
T ss_dssp             SSC
T ss_pred             CCE
Confidence            874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.76  E-value=7.4e-18  Score=147.05  Aligned_cols=191  Identities=13%  Similarity=0.015  Sum_probs=134.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-------CCcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi~  169 (294)
                      +.||+++||||+++||++++++|+++|++|++..|+++..+.....+.+++++|++|.++++++++       .+|++||
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVn   82 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN   82 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence            578999999999999999999999999999999999875433222356788999999988777654       5699999


Q ss_pred             cCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHHHHHH
Q 022625          170 PSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQD  217 (294)
Q Consensus       170 ~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~~a  217 (294)
                      +++.     +                         +...+++.+-.+||++||..+..+......|..+|+  ..+.+..
T Consensus        83 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~l  162 (248)
T d2d1ya1          83 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSL  162 (248)
T ss_dssp             CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHH
T ss_pred             eCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHHHHHH
Confidence            7321     0                         122355666789999999988877666666755543  2233444


Q ss_pred             HHHHHhCCCCEEEEEccceecCC---------CCCcce-eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          218 ESMLMASGIPYTIIRTGVLQNTP---------GGKQGF-QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       218 e~~l~~~gl~~tivRPg~l~~~~---------~~~~~~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                      ...+...|++++.|.||.+....         ...... .+.......-+..++|+|.++++++.+..  ..|+.+.+.+
T Consensus       163 A~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDG  242 (248)
T d2d1ya1         163 ALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDG  242 (248)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCc
Confidence            44556689999999999875210         000000 11111222335689999999999886544  4789999988


Q ss_pred             CC
Q 022625          286 IS  287 (294)
Q Consensus       286 g~  287 (294)
                      |-
T Consensus       243 G~  244 (248)
T d2d1ya1         243 GM  244 (248)
T ss_dssp             TG
T ss_pred             Cc
Confidence            74

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=9.9e-18  Score=145.70  Aligned_cols=192  Identities=14%  Similarity=0.066  Sum_probs=136.0

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--CCCcEEeecCCCCHHHHHHHhcC---CcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALRG---VRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~l~~---~d~Vi~~  170 (294)
                      ++.||+++||||+++||++++++|+++|++|++..|+++++.+..  ..+++.+.+|++|.+.++++++.   +|++||+
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn   81 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   81 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence            357999999999999999999999999999999999988765542  24688999999999999998875   4999998


Q ss_pred             CCc-----h---------------------H----Hhh-hhhcCCCEEEEecccccccCCCCchhccchhH--HHHHHHH
Q 022625          171 SEG-----F---------------------I----SNA-GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQD  217 (294)
Q Consensus       171 ~~~-----~---------------------~----~~~-~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~~a  217 (294)
                      ++.     +                     +    ... ..+.+-.++|++||.....+......|..+|.  ..+.+..
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~l  161 (242)
T d1cyda_          82 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAM  161 (242)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             CccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHHHHH
Confidence            321     0                     1    111 23334579999999988776666666655443  2233444


Q ss_pred             HHHHHhCCCCEEEEEccceecCCC----CCc--ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          218 ESMLMASGIPYTIIRTGVLQNTPG----GKQ--GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       218 e~~l~~~gl~~tivRPg~l~~~~~----~~~--~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      ...+...|++++.|.||++.....    ...  ...+.......-+..++|+|+++++++.+..  ..|+++.|.+|-
T Consensus       162 A~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG~  239 (242)
T d1cyda_         162 AMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGY  239 (242)
T ss_dssp             HHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred             HHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCceEEeCcch
Confidence            445566899999999998752110    000  0001111122345789999999999886543  579999998874

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.76  E-value=9.3e-18  Score=150.22  Aligned_cols=187  Identities=14%  Similarity=0.048  Sum_probs=126.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc--c---hhhh-cCCCcEEeecCCCCHHHHHHHhcCC--cEEEEcCC
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--N---AMES-FGTYVESMAGDASNKKFLKTALRGV--RSIICPSE  172 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~--~---~~~~-~~~~v~~v~~D~~d~~~l~~~l~~~--d~Vi~~~~  172 (294)
                      +||||||+||||++|+++|+++|++|+++++-..  +   .... ...+++++.+|++|.+.+.++++++  |+|||++.
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            7999999999999999999999999999864221  1   1111 2257999999999999999999865  99999832


Q ss_pred             c----------------------hHHhhhhhcCCCEEEEecccccccCCC-Cc---------------------hhccch
Q 022625          173 G----------------------FISNAGSLKGVQHVILLSQLSVYRGSG-GI---------------------QALMKG  208 (294)
Q Consensus       173 ~----------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~-~~---------------------~~~~~~  208 (294)
                      .                      .+.+++.+.+++++|+.||..+..... ..                     ..+.+.
T Consensus        82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T d1orra_          82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFH  161 (338)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCC
T ss_pred             cccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccccc
Confidence            1                      044567888888877777665432111 00                     000011


Q ss_pred             hHH-HHHHHHHH----HHHhCCCCEEEEEccceecCCC-----------------------CCcceeeccCCCCCCCcCH
Q 022625          209 NAR-KLAEQDES----MLMASGIPYTIIRTGVLQNTPG-----------------------GKQGFQFEEGCAANGSLSK  260 (294)
Q Consensus       209 ~~~-~~~~~ae~----~l~~~gl~~tivRPg~l~~~~~-----------------------~~~~~~~~~g~~~~~~Is~  260 (294)
                      ..+ ..+...|.    +.+..++..+++|+..++.+..                       ......++.|.+...++|+
T Consensus       162 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v  241 (338)
T d1orra_         162 SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHA  241 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEH
T ss_pred             cccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeecc
Confidence            111 12223333    3345789999999887653222                       1112234466677889999


Q ss_pred             HHHHHHHHHHhhCCC-CCCcEEEEecCC
Q 022625          261 EDAAFICVEALESIP-QTGLIFEVCEIS  287 (294)
Q Consensus       261 eDvA~~iv~aL~~~~-~~g~~~~v~~g~  287 (294)
                      +|++++++.+|+++. ..+++|++..+.
T Consensus       242 ~D~~~~~~~~l~~~~~~~~~~~~i~~~~  269 (338)
T d1orra_         242 EDMISLYFTALANVSKIRGNAFNIGGTI  269 (338)
T ss_dssp             HHHHHHHHHHHHTHHHHTTCEEEESSCG
T ss_pred             cchhhHHHHHHhccccccCccccccccc
Confidence            999999999998754 568999997653

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=1.2e-17  Score=149.10  Aligned_cols=174  Identities=11%  Similarity=0.082  Sum_probs=122.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEcCC---c
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE---G  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~---~  173 (294)
                      .|+|||||||||||++|+++|+++|+.|+++.+..              ..|+.|.+.+.++++  .+|.|+|+..   .
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~   67 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------ELNLLDSRAVHDFFASERIDQVYLAAAKVGG   67 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------hccccCHHHHHHHHhhcCCCEEEEcchhccc
Confidence            57999999999999999999999999988654322              258899999988876  4699999721   1


Q ss_pred             --------------------hHHhhhhhcCCCEEEEecccccccCCCCc--h--------hccchh-HHHHHHHHHHHHH
Q 022625          174 --------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--Q--------ALMKGN-ARKLAEQDESMLM  222 (294)
Q Consensus       174 --------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~--~--------~~~~~~-~~~~~~~ae~~l~  222 (294)
                                          .+.++|.+.+++||||+||.+++.+....  .        +..+.. +...|..+|.+++
T Consensus        68 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~  147 (315)
T d1e6ua_          68 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCE  147 (315)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHH
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHH
Confidence                                14456788999999999999987632210  0        001111 2223556666654


Q ss_pred             ----hCCCCEEEEEccceecCCCC-------------------------CcceeeccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          223 ----ASGIPYTIIRTGVLQNTPGG-------------------------KQGFQFEEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       223 ----~~gl~~tivRPg~l~~~~~~-------------------------~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                          +.|++++++||+.++ ||..                         ......+.|.....+++++|++.++..++..
T Consensus       148 ~~~~~~gl~~~ilR~~~vy-Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~  226 (315)
T d1e6ua_         148 SYNRQYGRDYRSVMPTNLY-GPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMEL  226 (315)
T ss_dssp             HHHHHHCCEEEEEEECEEE-STTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHS
T ss_pred             HHHHHhCCCEEEEeeccEE-CCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhh
Confidence                469999999999988 4431                         1112233456667889999999999998866


Q ss_pred             CC--------CCCcEEEEecCC
Q 022625          274 IP--------QTGLIFEVCEIS  287 (294)
Q Consensus       274 ~~--------~~g~~~~v~~g~  287 (294)
                      ..        .....+++..+.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~  248 (315)
T d1e6ua_         227 AHEVWLENTQPMLSHINVGTGV  248 (315)
T ss_dssp             CHHHHHHTSBTTBCCEEESCSC
T ss_pred             ccccccccccccccccccCCCc
Confidence            42        234567776653

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.75  E-value=1.3e-17  Score=145.62  Aligned_cols=192  Identities=14%  Similarity=0.175  Sum_probs=133.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-----cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      .+.+|+++||||+++||++++++|+++|++|++..|+++++.+.     .+.++.++.+|++|+++++++++       +
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            46799999999999999999999999999999999998765432     23478899999999988776654       5


Q ss_pred             CcEEEEcCCc-----h-------------------------HHhhhhhcCCC-EEEEecccccccCCCCchhccchhHH-
Q 022625          164 VRSIICPSEG-----F-------------------------ISNAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGNAR-  211 (294)
Q Consensus       164 ~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~-r~V~vSs~~~~~~~~~~~~~~~~~~~-  211 (294)
                      +|++||+++.     +                         +...+++.+.. ++|++||..+..+......|..+|.- 
T Consensus        83 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal  162 (251)
T d1zk4a1          83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAV  162 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             ceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHH
Confidence            6999998221     0                         11224555544 89999999887766666666555532 


Q ss_pred             -HHHH--HHHHHHHhCCCCEEEEEccceecC-----CCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          212 -KLAE--QDESMLMASGIPYTIIRTGVLQNT-----PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       212 -~~~~--~ae~~l~~~gl~~tivRPg~l~~~-----~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                       .+.+  +.|..+...||+++.|.||++...     +...............-+..++|+|.++++++.+..  ..|+.+
T Consensus       163 ~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i  242 (251)
T d1zk4a1         163 RIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEF  242 (251)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             hcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEE
Confidence             2222  223335678999999999987521     110000001111122335689999999999886544  479999


Q ss_pred             EEecCC
Q 022625          282 EVCEIS  287 (294)
Q Consensus       282 ~v~~g~  287 (294)
                      .|.+|-
T Consensus       243 ~vDGG~  248 (251)
T d1zk4a1         243 VVDGGY  248 (251)
T ss_dssp             EESTTG
T ss_pred             EECccc
Confidence            998774

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.75  E-value=7.2e-18  Score=146.18  Aligned_cols=186  Identities=13%  Similarity=0.113  Sum_probs=129.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-------CCcEEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII  168 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-------~~d~Vi  168 (294)
                      .+.+|+++||||+++||++++++|+++|++|++..|+.+...     ++..+++|++|+++++++++       ..|++|
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLV   78 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLV   78 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc-----CceEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence            457899999999999999999999999999999999986654     46778999999988877654       569999


Q ss_pred             EcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHHHHH
Q 022625          169 CPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQ  216 (294)
Q Consensus       169 ~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~~  216 (294)
                      |+++.             +                 +...+++.+-.+||++||..+..+......|..+|.  ..+.+.
T Consensus        79 nnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~  158 (237)
T d1uzma1          79 SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARS  158 (237)
T ss_dssp             EECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHH
T ss_pred             eeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHHHHHH
Confidence            97321             0                 222356677789999999988766656566655543  223344


Q ss_pred             HHHHHHhCCCCEEEEEccceecCCC---CCc-ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          217 DESMLMASGIPYTIIRTGVLQNTPG---GKQ-GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       217 ae~~l~~~gl~~tivRPg~l~~~~~---~~~-~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      ....+...|++++.|.||++.....   ... ...+.......-+..+||+|.++++++.+..  ..|+++.+.+|
T Consensus       159 lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG  234 (237)
T d1uzma1         159 IARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG  234 (237)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            4444566899999999998762110   000 0001111222345689999999999886544  57999999877

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=9.4e-18  Score=146.95  Aligned_cols=193  Identities=11%  Similarity=0.097  Sum_probs=137.2

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      ..+.+|+++||||+++||++++++|+++|++|++..|+++++.+.      .+..+..+++|++|+++++++++      
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999999998765432      23468889999999988776653      


Q ss_pred             -CCcEEEEcCCc------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--
Q 022625          163 -GVRSIICPSEG------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--  210 (294)
Q Consensus       163 -~~d~Vi~~~~~------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--  210 (294)
                       .+|++||+++.            +                 +...+++.+-.++|++||..+..+......|..+|.  
T Consensus        87 g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal  166 (255)
T d1fmca_          87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAA  166 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHH
Confidence             56999998321            0                 122345566678999999988777666667755543  


Q ss_pred             HHHHHHHHHHHHhCCCCEEEEEccceecCC----CCCc-ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEE
Q 022625          211 RKLAEQDESMLMASGIPYTIIRTGVLQNTP----GGKQ-GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEV  283 (294)
Q Consensus       211 ~~~~~~ae~~l~~~gl~~tivRPg~l~~~~----~~~~-~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v  283 (294)
                      ..+.+.....+...||+++.|.||++....    .... ...+.......-+..++|+|.++++++....  ..|+++.+
T Consensus       167 ~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~v  246 (255)
T d1fmca_         167 SHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTV  246 (255)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEE
Confidence            223344444556689999999999875211    0000 0011111222345689999999999886543  57999999


Q ss_pred             ecCC
Q 022625          284 CEIS  287 (294)
Q Consensus       284 ~~g~  287 (294)
                      .+|-
T Consensus       247 DGG~  250 (255)
T d1fmca_         247 SGGG  250 (255)
T ss_dssp             STTS
T ss_pred             CcCc
Confidence            8885

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.75  E-value=1.2e-17  Score=146.00  Aligned_cols=192  Identities=16%  Similarity=0.084  Sum_probs=134.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      ++.+|+++||||+++||++++++|+++|++|++..|+.+++.+.       .+..+..+.+|++|+++++++++      
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999998764332       34568889999999988877663      


Q ss_pred             -CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEeccccccc-CCCCchhccchhH
Q 022625          163 -GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYR-GSGGIQALMKGNA  210 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~-~~~~~~~~~~~~~  210 (294)
                       .+|++||+++.     +                         +...+++.+-.++|++||..+.. +......|..+|.
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKa  161 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKG  161 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHH
Confidence             56999998321     0                         22335666778999999876543 3444455654443


Q ss_pred             --HHHHHHHHHHHHhCCCCEEEEEccceecCCCC----Cc-c-eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          211 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQ-G-FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       211 --~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~----~~-~-~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                        ..+.+.....+...|++++.|.||++......    .. . ..+.......-+..++|+|+++++++....  ..|++
T Consensus       162 al~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~itG~~  241 (251)
T d1vl8a_         162 GVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQI  241 (251)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCE
T ss_pred             hHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCCCcCcE
Confidence              22334444556678999999999998632210    00 0 011111222335688999999999886544  47999


Q ss_pred             EEEecCC
Q 022625          281 FEVCEIS  287 (294)
Q Consensus       281 ~~v~~g~  287 (294)
                      +.|.+|-
T Consensus       242 i~vDGG~  248 (251)
T d1vl8a_         242 IFVDGGW  248 (251)
T ss_dssp             EEESTTG
T ss_pred             EEeCcCe
Confidence            9998774

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.75  E-value=9.7e-18  Score=146.88  Aligned_cols=192  Identities=13%  Similarity=0.098  Sum_probs=135.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      .+.+|+++||||+++||+++++.|+++|++|++..|+.+++.+.   .+.++..+.+|++|+++++++++       .+|
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iD   81 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSID   81 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            35789999999999999999999999999999999998775543   35678899999999988887664       569


Q ss_pred             EEEEcCCc-----h-------------------------HHh-hhhhcCCCEEEEecccccccCCCCchhccchhH--HH
Q 022625          166 SIICPSEG-----F-------------------------ISN-AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK  212 (294)
Q Consensus       166 ~Vi~~~~~-----~-------------------------~~~-~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~  212 (294)
                      ++||+++.     +                         +.. ..++.+-.+||++||..+..+......|..+|.  ..
T Consensus        82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  161 (256)
T d1k2wa_          82 ILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVIS  161 (256)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHH
Confidence            99998321     0                         111 123334579999999988877766666655443  22


Q ss_pred             HHHHHHHHHHhCCCCEEEEEccceecCCCC--------------Cc-ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--
Q 022625          213 LAEQDESMLMASGIPYTIIRTGVLQNTPGG--------------KQ-GFQFEEGCAANGSLSKEDAAFICVEALESIP--  275 (294)
Q Consensus       213 ~~~~ae~~l~~~gl~~tivRPg~l~~~~~~--------------~~-~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--  275 (294)
                      +.+.....+...||+++.|.||++......              .. ...+.......-+..++|+|.++++++....  
T Consensus       162 lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~~  241 (256)
T d1k2wa_         162 LTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADY  241 (256)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGGTT
T ss_pred             HHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            334444555668999999999987622100              00 0001111122345689999999999886543  


Q ss_pred             CCCcEEEEecCC
Q 022625          276 QTGLIFEVCEIS  287 (294)
Q Consensus       276 ~~g~~~~v~~g~  287 (294)
                      ..|+.+.|.+|.
T Consensus       242 iTG~~i~vDGG~  253 (256)
T d1k2wa_         242 IVAQTYNVDGGN  253 (256)
T ss_dssp             CCSCEEEESTTS
T ss_pred             ccCceEEECcch
Confidence            479999998874

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.75  E-value=1.3e-17  Score=146.30  Aligned_cols=191  Identities=14%  Similarity=0.054  Sum_probs=133.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhh-------hcCCCcEEeecCCCCHHHHHHHhc------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME-------SFGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~-------~~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      +.+|+++||||+++||++++++|+++|++|++..|+... +++       ..+..+.++.+|++|+++++++++      
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999997532 221       234578889999999988887764      


Q ss_pred             -CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH-
Q 022625          163 -GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-  210 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~-  210 (294)
                       .+|++||+++.     +                         +...+++.+-.+||++||..+..+......|..+|. 
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  161 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHG  161 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhh
Confidence             56999998321     0                         223356667789999999988777666666655543 


Q ss_pred             -HHHHHHHHHHHHhCCCCEEEEEccceecCCCCC--------cce--------eeccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          211 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK--------QGF--------QFEEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       211 -~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~--------~~~--------~~~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                       ..+.+.....+...|++++.|.||++.......        ...        .+.......-+..++|+|.++++++.+
T Consensus       162 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~  241 (260)
T d1x1ta1         162 VVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASD  241 (260)
T ss_dssp             HHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSG
T ss_pred             HHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh
Confidence             223344444456689999999999875221100        000        000111123356899999999998865


Q ss_pred             CC--CCCcEEEEecCC
Q 022625          274 IP--QTGLIFEVCEIS  287 (294)
Q Consensus       274 ~~--~~g~~~~v~~g~  287 (294)
                      ..  ..|+++.+.+|-
T Consensus       242 ~a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         242 AAAQITGTTVSVDGGW  257 (260)
T ss_dssp             GGTTCCSCEEEESTTG
T ss_pred             hhCCCcCCEEEECcch
Confidence            44  579999998874

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.74  E-value=2.9e-17  Score=142.76  Aligned_cols=191  Identities=15%  Similarity=0.091  Sum_probs=132.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHHhc-------CCcEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR-------GVRSI  167 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l~-------~~d~V  167 (294)
                      .+.+|+++||||+++||++++++|+++|++|++..|+++++.+... .+.+.+.+|++|+++++++++       .+|++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   81 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGV   81 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence            3578999999999999999999999999999999999887665432 367889999999988877654       56999


Q ss_pred             EEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHHHH
Q 022625          168 ICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE  215 (294)
Q Consensus       168 i~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~  215 (294)
                      ||+++.     +                         +...+++.+-.+++++||.. ..+..+...|..+|.  ..+.+
T Consensus        82 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~-~~~~~~~~~Y~asKaal~~ltk  160 (242)
T d1ulsa_          82 VHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTR  160 (242)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHH
T ss_pred             EECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccc-ccCCCCCcchHHHHHHHHHHHH
Confidence            998321     0                         12234556667788888754 334444455654443  22334


Q ss_pred             HHHHHHHhCCCCEEEEEccceecCCCCCcce----eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNTPGGKQGF----QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      .....+...|++++.|.||++..........    .+.......-+..++|+|.++++++.+..  ..|+++.+.+|-
T Consensus       161 ~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~  238 (242)
T d1ulsa_         161 TLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGR  238 (242)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCCcEEEECCCc
Confidence            4444556689999999999986322111100    01111222345689999999999986544  479999997774

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.74  E-value=5e-17  Score=142.47  Aligned_cols=192  Identities=13%  Similarity=0.093  Sum_probs=133.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      ++.+|+++||||+++||++++++|+++|++|++.+|+++++.+.      .+..++++.+|+++.+.++++++       
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   82 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   82 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            46799999999999999999999999999999999998765443      23467889999999988776553       


Q ss_pred             C-CcEEEEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH-
Q 022625          163 G-VRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-  210 (294)
Q Consensus       163 ~-~d~Vi~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~-  210 (294)
                      + .|+++|+.+.             +                 +...+.+.+..++|++||..+..+......|...|. 
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a  162 (258)
T d1ae1a_          83 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGA  162 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHH
Confidence            2 5899887221             0                 122355667789999999998777666666644432 


Q ss_pred             -HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCc--------c--eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          211 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ--------G--FQFEEGCAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       211 -~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~--------~--~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                       ..+.+.....+...||++..|.||++........        .  ..+.......-+.+++|+|.++++++.+..  ..
T Consensus       163 l~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~it  242 (258)
T d1ae1a_         163 INQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYIT  242 (258)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCc
Confidence             2233334444556899999999999762211000        0  000011122346789999999999996543  57


Q ss_pred             CcEEEEecCC
Q 022625          278 GLIFEVCEIS  287 (294)
Q Consensus       278 g~~~~v~~g~  287 (294)
                      |+.+.|.+|-
T Consensus       243 G~~i~vDGG~  252 (258)
T d1ae1a_         243 GQIIWADGGF  252 (258)
T ss_dssp             SCEEEESTTG
T ss_pred             CcEEEeCCCe
Confidence            8999998774

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.74  E-value=3.7e-17  Score=143.34  Aligned_cols=192  Identities=13%  Similarity=0.099  Sum_probs=136.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh--------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      +.+|+++||||+++||+++++.|+++|++|++..|+++++.+.        .+.++..+++|++|+++++++++      
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999999998764432        12367889999999988877653      


Q ss_pred             -CCcEEEEcCC-----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 -GVRSIICPSE-----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 -~~d~Vi~~~~-----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                       .+|++||+++     + +                         +...+++.+-.+||++||..+..+......|..+|.
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  161 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKH  161 (258)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHH
T ss_pred             CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHH
Confidence             5699999722     1 1                         112345567789999999988777666667755553


Q ss_pred             --HHHHHHHHHHHHhCCCCEEEEEccceecCCC--------CCcce----eeccCCCCCCCcCHHHHHHHHHHHhhCCC-
Q 022625          211 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPG--------GKQGF----QFEEGCAANGSLSKEDAAFICVEALESIP-  275 (294)
Q Consensus       211 --~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~--------~~~~~----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-  275 (294)
                        ..+.+.....+...||+++.|.||++.....        .....    .+.......-+..++|+|.++++++.+.. 
T Consensus       162 al~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~s~  241 (258)
T d1iy8a_         162 GVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDAS  241 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence              2233444445566899999999998752100        00000    01111222345689999999999886543 


Q ss_pred             -CCCcEEEEecCCc
Q 022625          276 -QTGLIFEVCEISN  288 (294)
Q Consensus       276 -~~g~~~~v~~g~~  288 (294)
                       ..|+++.|.+|-.
T Consensus       242 ~itG~~i~VDGG~s  255 (258)
T d1iy8a_         242 YVNATVVPIDGGQS  255 (258)
T ss_dssp             TCCSCEEEESTTTT
T ss_pred             CCcCceEEcCcchh
Confidence             5789999988754

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.5e-17  Score=145.18  Aligned_cols=191  Identities=13%  Similarity=0.022  Sum_probs=134.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--CCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      .+.+|+++||||+++||+++++.|+++|++|++..|+++++.+..  ..+...+.+|++|.++++++++       .+|+
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            457999999999999999999999999999999999988765432  2467889999999988877664       5699


Q ss_pred             EEEcCC-----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHH
Q 022625          167 IICPSE-----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL  213 (294)
Q Consensus       167 Vi~~~~-----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~  213 (294)
                      +||+++     . +                         +...+++.+ .++|++||..+..+......|..+|.  ..+
T Consensus        83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l  161 (250)
T d1ydea1          83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAM  161 (250)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccCcchhHHHHhhHHHH
Confidence            999832     1 0                         112344444 79999999988766666666655543  223


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCC-------CCCcc--e-eeccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcEEE
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTP-------GGKQG--F-QFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFE  282 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~-------~~~~~--~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~~~  282 (294)
                      .+.....+...||+++.|.||++....       .....  . .........-+..++|+|.++++++.+.. ..|+++.
T Consensus       162 t~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sda~~itG~~i~  241 (250)
T d1ydea1         162 TKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASEANFCTGIELL  241 (250)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHHCTTCCSCEEE
T ss_pred             HHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccCCCcCCeEE
Confidence            344444556689999999999875210       00000  0 00011122345689999999999886433 4789999


Q ss_pred             EecCC
Q 022625          283 VCEIS  287 (294)
Q Consensus       283 v~~g~  287 (294)
                      |.+|-
T Consensus       242 vDGG~  246 (250)
T d1ydea1         242 VTGGA  246 (250)
T ss_dssp             ESTTT
T ss_pred             ECCCc
Confidence            98874

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.73  E-value=1.6e-17  Score=145.73  Aligned_cols=192  Identities=15%  Similarity=0.068  Sum_probs=123.2

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      .++++|+++||||+++||+++++.|+++|++|+++.|+++++.+.      ...++..+.+|++|+++++++++      
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999998775443      22468899999999987766542      


Q ss_pred             -C-CcEEEEcCCch------------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          163 -G-VRSIICPSEGF------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 -~-~d~Vi~~~~~~------------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                       + +|++||+++..                              +...+++.+-.+||++||..+..+......|..+|.
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  163 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKG  163 (259)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHH
T ss_pred             CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccccccc
Confidence             3 69999973210                              122355667789999999888766555555655443


Q ss_pred             --HHHHHHHHHHHHhCCCCEEEEEccceecCCCC----Ccce-eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEE
Q 022625          211 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQGF-QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIF  281 (294)
Q Consensus       211 --~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~----~~~~-~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~  281 (294)
                        ..+.+.....+...||+++.|.||++......    .... .+.......-+.+++|||.++++++.+..  ..|+.+
T Consensus       164 al~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~iTG~~i  243 (259)
T d1xq1a_         164 ALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTI  243 (259)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHHTSGGGTTCCSCEE
T ss_pred             chhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCcEE
Confidence              22334444556668999999999987522111    0000 00011111234578999999999886543  478899


Q ss_pred             EEecC
Q 022625          282 EVCEI  286 (294)
Q Consensus       282 ~v~~g  286 (294)
                      .|.+|
T Consensus       244 ~vDGG  248 (259)
T d1xq1a_         244 CVDGG  248 (259)
T ss_dssp             ECCCC
T ss_pred             EeCCC
Confidence            88776

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.73  E-value=2.6e-17  Score=144.59  Aligned_cols=193  Identities=12%  Similarity=0.069  Sum_probs=133.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhh------hcCCCcEEeecCCCCHHHHHHHhc------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~------~~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      ++.+|+++||||+++||++++++|+++|++|++..|+.+. +.+      ..+..+..+++|++|+++++++++      
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999998653 221      123467889999999988877664      


Q ss_pred             -CCcEEEEcCCc-----h-------------------------HHhhhhhcCC-CEEEEecccccccCCCCchhccchhH
Q 022625          163 -GVRSIICPSEG-----F-------------------------ISNAGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv-~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                       .+|++||+++.     +                         +...+.+.+- .+||++||.....+......|..+|.
T Consensus        84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKa  163 (261)
T d1geea_          84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKG  163 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCc
Confidence             56999998321     0                         1222444443 46999999988766665566655543


Q ss_pred             --HHHHHHHHHHHHhCCCCEEEEEccceecCCC-----CCcc-eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          211 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPG-----GKQG-FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       211 --~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~-----~~~~-~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                        ..+.+.....+...||+++.|.||++.....     .... ..+.......-+..++|+|.++++++.+..  ..|++
T Consensus       164 al~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~  243 (261)
T d1geea_         164 GMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGIT  243 (261)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             cchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCe
Confidence              2233444455667899999999998762211     0000 001111122335689999999999886544  57999


Q ss_pred             EEEecCCc
Q 022625          281 FEVCEISN  288 (294)
Q Consensus       281 ~~v~~g~~  288 (294)
                      +.|.+|-.
T Consensus       244 i~vDGG~s  251 (261)
T d1geea_         244 LFADGGMT  251 (261)
T ss_dssp             EEESTTGG
T ss_pred             EEECCCee
Confidence            99988854

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.73  E-value=1.3e-16  Score=140.49  Aligned_cols=193  Identities=9%  Similarity=0.057  Sum_probs=133.0

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc-----CCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      .+.+|+++||||+++||++++++|+++|++|+++.|+++++.+..     ...+.++.+|++|+++++++++       .
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999999999999999999999987754431     2357789999999988887764       5


Q ss_pred             CcEEEEcCCc-------h-------------------------HHhhhhhcCCCEEEEecccccccCCCCc-hhccchhH
Q 022625          164 VRSIICPSEG-------F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI-QALMKGNA  210 (294)
Q Consensus       164 ~d~Vi~~~~~-------~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~-~~~~~~~~  210 (294)
                      +|++||+++.       +                         +...+.+.+-.++|++||..+.....+. ..|..+|.
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKa  162 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKH  162 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHH
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHH
Confidence            6999997220       0                         1223566677899999998776543332 23433332


Q ss_pred             --HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-c---ee----ecc-CCCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          211 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-G---FQ----FEE-GCAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       211 --~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-~---~~----~~~-g~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                        ..+.+.....+...||+++.|.||++........ .   ..    ... ......+..++|||.++++++.+..  ..
T Consensus       163 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~it  242 (268)
T d2bgka1         163 AVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVS  242 (268)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCCcc
Confidence              2233334444566899999999998763211110 0   00    001 1122345689999999999987543  57


Q ss_pred             CcEEEEecCCc
Q 022625          278 GLIFEVCEISN  288 (294)
Q Consensus       278 g~~~~v~~g~~  288 (294)
                      |+++.|.+|-+
T Consensus       243 Gq~i~VDGG~t  253 (268)
T d2bgka1         243 GLNLVIDGGYT  253 (268)
T ss_dssp             SCEEEESTTGG
T ss_pred             CceEEECcCcc
Confidence            99999988743

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.73  E-value=1.9e-17  Score=145.26  Aligned_cols=193  Identities=13%  Similarity=0.048  Sum_probs=134.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      ++.+|+++||||+++||++++++|+++|++|++..|+++++.+.      .+..+.++.+|++|+++++++++       
T Consensus         5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   84 (259)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            56799999999999999999999999999999999998775543      23467889999999988776542       


Q ss_pred             -CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH-
Q 022625          163 -GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-  210 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~-  210 (294)
                       .+|++||+++.     +                         +...+++.+-.+||++||..+..+......|..+|. 
T Consensus        85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  164 (259)
T d2ae2a_          85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGA  164 (259)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHH
Confidence             36999998321     0                         122345566689999999988776666666654443 


Q ss_pred             -HHHHHHHHHHHHhCCCCEEEEEccceecCC-----CCC---cc-eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCC
Q 022625          211 -RKLAEQDESMLMASGIPYTIIRTGVLQNTP-----GGK---QG-FQFEEGCAANGSLSKEDAAFICVEALESIP--QTG  278 (294)
Q Consensus       211 -~~~~~~ae~~l~~~gl~~tivRPg~l~~~~-----~~~---~~-~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g  278 (294)
                       ..+.+.....+...||+++.|.||++....     ...   .. ..+.......-+..++|+|.++++++.+..  ..|
T Consensus       165 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG  244 (259)
T d2ae2a_         165 MDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTG  244 (259)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcC
Confidence             223333444455689999999999875210     000   00 001111222345689999999999887544  479


Q ss_pred             cEEEEecCCc
Q 022625          279 LIFEVCEISN  288 (294)
Q Consensus       279 ~~~~v~~g~~  288 (294)
                      +++.|.+|-.
T Consensus       245 ~~i~VDGG~~  254 (259)
T d2ae2a_         245 QIIYVDGGLM  254 (259)
T ss_dssp             CEEEESTTGG
T ss_pred             cEEEECCCeE
Confidence            9999988743

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.72  E-value=2.9e-17  Score=143.48  Aligned_cols=169  Identities=15%  Similarity=0.107  Sum_probs=119.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEcCCch---
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEGF---  174 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~~~---  174 (294)
                      |+|||||||||||++|+++|.++|++|++++|+.               .|+.|.+.++++++  ..|+|||+....   
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~~   66 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHTAVD   66 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------ccCCCHHHHHHHHHHcCCCEEEeeccccccc
Confidence            6799999999999999999999999999998764               58999999999987  459999983210   


Q ss_pred             -------------------HHhhhhhcCCCEEEEecccccccCCCC--ch---hccc-hhHHHHHHHHHHHHHhCCCCEE
Q 022625          175 -------------------ISNAGSLKGVQHVILLSQLSVYRGSGG--IQ---ALMK-GNARKLAEQDESMLMASGIPYT  229 (294)
Q Consensus       175 -------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~--~~---~~~~-~~~~~~~~~ae~~l~~~gl~~t  229 (294)
                                         +...+.. ...++++.|+..++.....  ..   ...+ ......+...|.++++.+++++
T Consensus        67 ~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~~~~~~  145 (281)
T d1vl0a_          67 KCEEQYDLAYKINAIGPKNLAAAAYS-VGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYY  145 (281)
T ss_dssp             HHHHCHHHHHHHHTHHHHHHHHHHHH-HTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEE
T ss_pred             cccccchhhccccccccccccccccc-ccccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHhCCCcc
Confidence                               1112223 3457778887766542211  00   0011 1122345577888899999999


Q ss_pred             EEEccceecCCCCC-----------cceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 022625          230 IIRTGVLQNTPGGK-----------QGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       230 ivRPg~l~~~~~~~-----------~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                      ++||+.++ +++..           .......++...++++++|+++++..+++++..  ..|++++++
T Consensus       146 i~R~~~vy-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~--g~~~~~~~~  211 (281)
T d1vl0a_         146 IVRTAWLY-GDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNY--GTFHCTCKG  211 (281)
T ss_dssp             EEEECSEE-SSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTCC--EEEECCCBS
T ss_pred             ccceeEEe-CCCcccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhccc--CceeEeCCC
Confidence            99999998 44421           112223456778899999999999999987543  488887764

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.72  E-value=1.6e-17  Score=145.85  Aligned_cols=191  Identities=14%  Similarity=0.085  Sum_probs=134.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .+.+|+++||||+++||+++++.|+++|++|++..|+++++.+.      .+..+..+.+|++|+++++++++       
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999999998765432      23468889999999988877664       


Q ss_pred             CCcEEEEcCC-----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH-
Q 022625          163 GVRSIICPSE-----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-  210 (294)
Q Consensus       163 ~~d~Vi~~~~-----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~-  210 (294)
                      .+|++||+.+     + +                         +...+.+.+-.++|++||..+..+......|..+|. 
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  161 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGA  161 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHH
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHH
Confidence            5699999722     1 1                         112245566789999999988777766667755543 


Q ss_pred             -HHHHHHHHHHHHhCCCCEEEEEccceecCCC------------CCcce--------eeccCCCCCCCcCHHHHHHHHHH
Q 022625          211 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPG------------GKQGF--------QFEEGCAANGSLSKEDAAFICVE  269 (294)
Q Consensus       211 -~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~------------~~~~~--------~~~~g~~~~~~Is~eDvA~~iv~  269 (294)
                       ..+.+.....+...||+++.|.||++.....            .....        .+.......-+..++|+|.++++
T Consensus       162 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~f  241 (260)
T d1zema1         162 IIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAF  241 (260)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHH
T ss_pred             HHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             2233444445566899999999999763210            00000        00011122335678999999999


Q ss_pred             HhhCCC--CCCcEEEEecC
Q 022625          270 ALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       270 aL~~~~--~~g~~~~v~~g  286 (294)
                      ++.+..  ..|+++.|.+|
T Consensus       242 L~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         242 LLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHSGGGTTCCSCEEEESCC
T ss_pred             HhCchhcCccCCeEEeCCC
Confidence            987543  47899998775

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.72  E-value=7.8e-17  Score=139.19  Aligned_cols=189  Identities=15%  Similarity=0.097  Sum_probs=134.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH-HHHHHHhcCCcEEEEcCCc--
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTALRGVRSIICPSEG--  173 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~-~~l~~~l~~~d~Vi~~~~~--  173 (294)
                      +++|++|||||+++||++++++|+++|++|++..|+++.+.+.   ..+++.+|+++. +.+.+.+..+|++||+++.  
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~---~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~   78 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---GHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPK   78 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---CSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc---CCcEEEcchHHHHHHHHHHhCCCcEEEecccccC
Confidence            4689999999999999999999999999999999998776542   457788999863 5566677788999998321  


Q ss_pred             ---h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHHHHHHHHHHHh
Q 022625          174 ---F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESMLMA  223 (294)
Q Consensus       174 ---~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~~ae~~l~~  223 (294)
                         +                         +...+++.+-.++|++||.....+......|..+|.  ..+.+.....+..
T Consensus        79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~  158 (234)
T d1o5ia_          79 AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAP  158 (234)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHhcc
Confidence               0                         122355667789999999887776666666654432  2233444455666


Q ss_pred             CCCCEEEEEccceecCCCCC-----cceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          224 SGIPYTIIRTGVLQNTPGGK-----QGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       224 ~gl~~tivRPg~l~~~~~~~-----~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      .|++++.|.||++.......     ....+........+..++|+|.++++++.+..  ..|+++.+.+|-.
T Consensus       159 ~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s  230 (234)
T d1o5ia_         159 YGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLS  230 (234)
T ss_dssp             GTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             cCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcEEEECcccc
Confidence            89999999999876321100     00011112223446689999999999886544  4799999988854

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.72  E-value=4.2e-17  Score=142.58  Aligned_cols=191  Identities=13%  Similarity=0.073  Sum_probs=132.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      .+.+|+++||||+++||+++++.|+++|++|++..|+++++.+.   .+....++.+|++|.++++++++       ..|
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD   82 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            46789999999999999999999999999999999998765443   35578889999999988776654       569


Q ss_pred             EEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHH
Q 022625          166 SIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL  213 (294)
Q Consensus       166 ~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~  213 (294)
                      ++||+++.     +                         +...+++.+ .+||++||..+..+......|..+|.  ..+
T Consensus        83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  161 (253)
T d1hxha_          83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSAL  161 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCccccccccchhHHHHHH
Confidence            99998321     0                         122344444 79999999988777666667765553  223


Q ss_pred             HHHHHHHHHh--CCCCEEEEEccceecC------CCC-Ccce--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          214 AEQDESMLMA--SGIPYTIIRTGVLQNT------PGG-KQGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       214 ~~~ae~~l~~--~gl~~tivRPg~l~~~------~~~-~~~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                      .+.....+..  .+|+++.|.||++...      +.. ....  ....-.....+..++|+|.++++++.+..  ..|+.
T Consensus       162 t~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itG~~  241 (253)
T d1hxha_         162 TRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSE  241 (253)
T ss_dssp             HHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCCcCcE
Confidence            3333333333  4699999999987521      111 0000  00011112235679999999999887544  47999


Q ss_pred             EEEecCC
Q 022625          281 FEVCEIS  287 (294)
Q Consensus       281 ~~v~~g~  287 (294)
                      +.|.+|-
T Consensus       242 i~VDGG~  248 (253)
T d1hxha_         242 LHADNSI  248 (253)
T ss_dssp             EEESSSC
T ss_pred             EEECccH
Confidence            9998773

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.9e-17  Score=144.74  Aligned_cols=190  Identities=14%  Similarity=0.140  Sum_probs=132.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------c-CCCcEEeecCCCCHHHHHHHhc-------
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .||+++||||+++||+++++.|+++|++|+++.|+.+++.+.       . +..+..+.+|++|.++++++++       
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999999999999998764332       1 2367889999999988877664       


Q ss_pred             CCcEEEEcCCc-----h-----------------HHhhhhhcC---CCEEEEecccccccCCCCchhccchhH--HHHHH
Q 022625          163 GVRSIICPSEG-----F-----------------ISNAGSLKG---VQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE  215 (294)
Q Consensus       163 ~~d~Vi~~~~~-----~-----------------~~~~~~~~g---v~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~  215 (294)
                      .+|++||+++.     +                 ....+.+.+   -.+||++||..+..+......|..+|.  ..+.+
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr  161 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTR  161 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHH
Confidence            56999998321     1                 112233322   367999999988777666666755543  12223


Q ss_pred             H--HHHHHHhCCCCEEEEEccceecCC----CCCc----ce----eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEE
Q 022625          216 Q--DESMLMASGIPYTIIRTGVLQNTP----GGKQ----GF----QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIF  281 (294)
Q Consensus       216 ~--ae~~l~~~gl~~tivRPg~l~~~~----~~~~----~~----~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~  281 (294)
                      .  .+..+...|++++.|.||++....    ....    ..    .+........+..++|+|++++++++++...|+++
T Consensus       162 s~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~itG~~i  241 (254)
T d2gdza1         162 SAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNGAIM  241 (254)
T ss_dssp             HHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCTTCSSCEE
T ss_pred             HHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHcCCCCCCCEE
Confidence            1  244556789999999999874110    0000    00    00000011235689999999999999877789999


Q ss_pred             EEecCC
Q 022625          282 EVCEIS  287 (294)
Q Consensus       282 ~v~~g~  287 (294)
                      .|.+|.
T Consensus       242 ~VdGG~  247 (254)
T d2gdza1         242 KITTSK  247 (254)
T ss_dssp             EEETTT
T ss_pred             EECCCC
Confidence            998874

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.71  E-value=1.2e-16  Score=139.61  Aligned_cols=188  Identities=15%  Similarity=0.088  Sum_probs=130.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      |.++||||+++||++++++|+++|++|++..|+++++.+.      .+.++..+++|++|+++++++++       .+|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            5679999999999999999999999999999998775443      23468889999999988877653       5699


Q ss_pred             EEEcCCc-----h-------------------------HHhhhhhc-CCCEEEEecccccccCCCCchhccchhH--HHH
Q 022625          167 IICPSEG-----F-------------------------ISNAGSLK-GVQHVILLSQLSVYRGSGGIQALMKGNA--RKL  213 (294)
Q Consensus       167 Vi~~~~~-----~-------------------------~~~~~~~~-gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~  213 (294)
                      +||+++.     +                         +...+.+. +-.++|++||..+..+......|..+|.  ..+
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  161 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGL  161 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHhh
Confidence            9998321     0                         11123333 3568999999988777666666655543  223


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCCC------------C--Cc-ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--C
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTPG------------G--KQ-GFQFEEGCAANGSLSKEDAAFICVEALESIP--Q  276 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~~------------~--~~-~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~  276 (294)
                      .+.....+...|++++.|.||++.....            .  .. ...+.......-+..++|+|.++++++.+..  .
T Consensus       162 tk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~i  241 (255)
T d1gega_         162 TQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYM  241 (255)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCc
Confidence            3444455667899999999998752100            0  00 0001111222345689999999999886543  4


Q ss_pred             CCcEEEEecCC
Q 022625          277 TGLIFEVCEIS  287 (294)
Q Consensus       277 ~g~~~~v~~g~  287 (294)
                      .|+.+.+.+|-
T Consensus       242 tG~~i~vDGG~  252 (255)
T d1gega_         242 TGQSLLIDGGM  252 (255)
T ss_dssp             CSCEEEESSSS
T ss_pred             cCcEEEecCCE
Confidence            79999998873

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=7.6e-17  Score=140.26  Aligned_cols=174  Identities=13%  Similarity=0.134  Sum_probs=123.3

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      .++.||+++||||+++||++++++|+++|++|++.+|+++++.+.      .+.++..+.+|++|.++++++++      
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            356899999999999999999999999999999999999875443      23478899999999988877654      


Q ss_pred             -CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          163 -GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                       .+|++||+++.     +                         +...+.+.+-.+||++||..+..+......|..+|+.
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  162 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFA  162 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHH
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHH
Confidence             46999998321     0                         2223567777899999999887665555556444431


Q ss_pred             --HHHHHHHHHHHh---CCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCC
Q 022625          212 --KLAEQDESMLMA---SGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESI  274 (294)
Q Consensus       212 --~~~~~ae~~l~~---~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~  274 (294)
                        .+.+.....+..   .|++++.|.||++....-....      ......+.++|+|+.++..+..+
T Consensus       163 l~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~------~~~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         163 AVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS------TSLGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             HHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH------HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC------ccccCCCCHHHHHHHHHHHHhcC
Confidence              122322333332   5899999999987633211111      11234568999999999888764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.70  E-value=1.4e-16  Score=138.10  Aligned_cols=171  Identities=12%  Similarity=0.126  Sum_probs=123.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCe-------EEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc----
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTR-------IKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~-------V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      +.||||||+++||++++++|+++|++       |++..|+++++.+.      .+..+.++.+|++|.++++++++    
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35799999999999999999999997       88899998765443      23467889999999988877654    


Q ss_pred             ---CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchh
Q 022625          163 ---GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN  209 (294)
Q Consensus       163 ---~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~  209 (294)
                         .+|++||+++.     +                         +...+++.+-.++|++||..+..+......|..+|
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  161 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSK  161 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHH
Confidence               46999998321     0                         22335666778999999998887766666775555


Q ss_pred             H--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC
Q 022625          210 A--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP  275 (294)
Q Consensus       210 ~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~  275 (294)
                      .  ..+.+.....+...|++++.|.||++...... .   + ..........++|+|+++++++.++.
T Consensus       162 ~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~-~---~-~~~~~~~~~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         162 FGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG-K---V-DDEMQALMMMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC-C---C-CSTTGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhh-h---c-CHhhHhcCCCHHHHHHHHHHHHcCCc
Confidence            3  22344445556678999999999987632111 1   0 11122345689999999999998765

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.70  E-value=7.4e-17  Score=141.19  Aligned_cols=189  Identities=11%  Similarity=0.088  Sum_probs=132.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      +|.+|||||+++||++++++|+++|++|++..|+++++.+.      .+..+..+++|++|+++++++++       .+|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            78999999999999999999999999999999998765442      23468889999999988877664       469


Q ss_pred             EEEEcCCc-----h---------------------HHhh------hhhcCCCEEEEecccccccCCCCchhccchhH--H
Q 022625          166 SIICPSEG-----F---------------------ISNA------GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R  211 (294)
Q Consensus       166 ~Vi~~~~~-----~---------------------~~~~------~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~  211 (294)
                      ++||+++.     +                     +...      +.+.+..++|++||..+..+......|..+|.  .
T Consensus        82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~  161 (257)
T d2rhca1          82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV  161 (257)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHH
Confidence            99998321     0                     1111      23456679999999988777766667755543  2


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCCC------------CCc---ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC-
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTPG------------GKQ---GFQFEEGCAANGSLSKEDAAFICVEALESIP-  275 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~~------------~~~---~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-  275 (294)
                      .+.+.....+...||+++.|.||++.....            ...   ...+.......-+..++|+|.++++++.... 
T Consensus       162 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s~  241 (257)
T d2rhca1         162 GFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAA  241 (257)
T ss_dssp             HHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            233333444555789999999998752100            000   0001111222345689999999999886543 


Q ss_pred             -CCCcEEEEecCC
Q 022625          276 -QTGLIFEVCEIS  287 (294)
Q Consensus       276 -~~g~~~~v~~g~  287 (294)
                       ..|+.+.|.+|-
T Consensus       242 ~itG~~i~vDGG~  254 (257)
T d2rhca1         242 AVTAQALNVCGGL  254 (257)
T ss_dssp             TCCSCEEEESTTC
T ss_pred             CCcCceEEECcCc
Confidence             578999998874

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.69  E-value=2.3e-16  Score=142.66  Aligned_cols=177  Identities=14%  Similarity=0.068  Sum_probs=117.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-----cCCCcEEeecCCCCHHHHHHHhcC--CcEEEEc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRG--VRSIICP  170 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~~~v~~v~~D~~d~~~l~~~l~~--~d~Vi~~  170 (294)
                      .+|+|||||||||||++|+++|+++|++|++++|+..+....     ..+.++++.+|++|.+.+.++++.  .|+|+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~   86 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   86 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence            479999999999999999999999999999999987654332     235799999999999999998875  4899997


Q ss_pred             CCc----------------------hHHhhhhhcC-CCEEEEecccccccCCCC------chhccchhHHH-HHHHHHHH
Q 022625          171 SEG----------------------FISNAGSLKG-VQHVILLSQLSVYRGSGG------IQALMKGNARK-LAEQDESM  220 (294)
Q Consensus       171 ~~~----------------------~~~~~~~~~g-v~r~V~vSs~~~~~~~~~------~~~~~~~~~~~-~~~~ae~~  220 (294)
                      +..                      .+.+++.+.+ .+.+++.|+...+.....      ..+..+...+. .+...|..
T Consensus        87 aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~  166 (356)
T d1rkxa_          87 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELV  166 (356)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHH
T ss_pred             hccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhh
Confidence            321                      0344555555 455555555444321111      00111111111 11122221


Q ss_pred             H-------------HhCCCCEEEEEccceecCCCC----------------CcceeeccCCCCCCCcCHHHHHHHHHHHh
Q 022625          221 L-------------MASGIPYTIIRTGVLQNTPGG----------------KQGFQFEEGCAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       221 l-------------~~~gl~~tivRPg~l~~~~~~----------------~~~~~~~~g~~~~~~Is~eDvA~~iv~aL  271 (294)
                      +             ...++.++++||+.++ ||.+                +....++.+.....+++++|++.+++.++
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~vy-Gp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~~  245 (356)
T d1rkxa_         167 TSSYRNSFFNPANYGQHGTAVATVRAGNVI-GGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLA  245 (356)
T ss_dssp             HHHHHHHHSCGGGHHHHCCEEEEEECCCEE-CTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHH
T ss_pred             hhHHhhhcccchhccccCceEEeccCCCee-CCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhhhhh
Confidence            1             1357899999999988 4432                22233455666678899999999999888


Q ss_pred             hCCC
Q 022625          272 ESIP  275 (294)
Q Consensus       272 ~~~~  275 (294)
                      ..+.
T Consensus       246 ~~~~  249 (356)
T d1rkxa_         246 QKLY  249 (356)
T ss_dssp             HHHH
T ss_pred             hhhc
Confidence            7643

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.69  E-value=2.2e-16  Score=138.58  Aligned_cols=192  Identities=15%  Similarity=0.142  Sum_probs=126.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---------CCCcEEeecCCCCHHHHHHHhc----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---------GTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      .+.+|+++||||+++||++++++|+++|++|++..|+++++.+..         +.++..+++|++|.++++++++    
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999987654321         1258899999999988877664    


Q ss_pred             ---CCcEEEEcCCc-----------------h-----------------HHhhhhhcCCCEEEEeccc-ccccCCCCchh
Q 022625          163 ---GVRSIICPSEG-----------------F-----------------ISNAGSLKGVQHVILLSQL-SVYRGSGGIQA  204 (294)
Q Consensus       163 ---~~d~Vi~~~~~-----------------~-----------------~~~~~~~~gv~r~V~vSs~-~~~~~~~~~~~  204 (294)
                         .+|++||+++.                 +                 +...+++.+ .++|+++|. ....+......
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~  160 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPY  160 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHH
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchh
Confidence               56999998321                 0                 111234444 456655554 44445444455


Q ss_pred             ccchhH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce------ee-------ccCCCCCCCcCHHHHHHHHHH
Q 022625          205 LMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF------QF-------EEGCAANGSLSKEDAAFICVE  269 (294)
Q Consensus       205 ~~~~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~------~~-------~~g~~~~~~Is~eDvA~~iv~  269 (294)
                      |..+|.  ..+.+.....+...|++++.|.||++..........      .+       .......-+..++|+|+++++
T Consensus       161 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~f  240 (264)
T d1spxa_         161 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF  240 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            544442  223344445556689999999999876321110000      00       000112335689999999999


Q ss_pred             HhhCC--C-CCCcEEEEecCCc
Q 022625          270 ALESI--P-QTGLIFEVCEISN  288 (294)
Q Consensus       270 aL~~~--~-~~g~~~~v~~g~~  288 (294)
                      ++.++  . ..|+.+.|.+|-.
T Consensus       241 L~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         241 LADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             HHCHHHHTTCCSCEEEESTTGG
T ss_pred             HhCCcccCCccCceEEeCCChh
Confidence            88643  2 5799999987743

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.69  E-value=3.8e-16  Score=138.84  Aligned_cols=194  Identities=10%  Similarity=0.103  Sum_probs=131.9

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCHHHHHHHh-----
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTAL-----  161 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l-----  161 (294)
                      +.++.+|+++||||+++||++++++|+++|++|+++.|+.+++.+.       .+..+..+.+|++|.+.+++++     
T Consensus        20 ~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          20 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence            3578899999999999999999999999999999999998764332       3456788999999998887655     


Q ss_pred             --cCCcEEEEcCCc-----h---------------------HH-----hhhhhcCCCEEEEecccccccCCCCchhccch
Q 022625          162 --RGVRSIICPSEG-----F---------------------IS-----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       162 --~~~d~Vi~~~~~-----~---------------------~~-----~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                        .++|++||+.+.     +                     +.     ......+...++.+|+.....+......|..+
T Consensus       100 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ysas  179 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASA  179 (294)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHH
Confidence              356999998321     0                     00     01223345567788877666555555556444


Q ss_pred             hH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCC----Ccc---eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          209 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGG----KQG---FQFEEGCAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       209 ~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~----~~~---~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                      |.  ..+.+.....+...||+++.|.||++......    ...   ..+.......-+..++|+|.++++++.+..  ..
T Consensus       180 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~~it  259 (294)
T d1w6ua_         180 KAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWIN  259 (294)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhcCCC
Confidence            32  22334444455668999999999998622110    000   001111222346689999999999997644  57


Q ss_pred             CcEEEEecCC
Q 022625          278 GLIFEVCEIS  287 (294)
Q Consensus       278 g~~~~v~~g~  287 (294)
                      |+++.|.+|.
T Consensus       260 G~~i~vDGG~  269 (294)
T d1w6ua_         260 GAVIKFDGGE  269 (294)
T ss_dssp             SCEEEESTTH
T ss_pred             CcEEEECCCh
Confidence            9999998874

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.69  E-value=2.1e-16  Score=137.39  Aligned_cols=187  Identities=15%  Similarity=0.133  Sum_probs=128.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEc-Cccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R-~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      +.|+||||+++||++++++|+++|++|++.++ +++.+.+.      .+.++.++.+|++|+++++++++       .+|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            57999999999999999999999999998755 44433221      34568889999999988877664       569


Q ss_pred             EEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHH
Q 022625          166 SIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL  213 (294)
Q Consensus       166 ~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~  213 (294)
                      ++||+++.     +                         +...+++.+-.+||++||..+..+......|..+|.  ..+
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~l  161 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGF  161 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHC
Confidence            99998321     0                         223356667789999999988776666666655543  223


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecC----CCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC---CCCcEEEEecC
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNT----PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP---QTGLIFEVCEI  286 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~----~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~---~~g~~~~v~~g  286 (294)
                      .+.....+...|++++.|.||++...    ........+.......-+..++|+|.++++++..+.   ..|+++.+.+|
T Consensus       162 tk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG  241 (244)
T d1edoa_         162 SKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             HHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred             hHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCC
Confidence            34444556678999999999987521    110000011111222345689999999999753332   47899999777

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.4e-16  Score=139.90  Aligned_cols=191  Identities=14%  Similarity=0.097  Sum_probs=126.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-----------cCCCcEEeecCCCCHHHHHHHhc--
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----------FGTYVESMAGDASNKKFLKTALR--  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~v~~v~~D~~d~~~l~~~l~--  162 (294)
                      .+.+|+++||||+++||++++++|+++|++|++..|+.+++.+.           .+..+..+.+|++|+++++++++  
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998764321           12368889999999988877654  


Q ss_pred             -----CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccc
Q 022625          163 -----GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK  207 (294)
Q Consensus       163 -----~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~  207 (294)
                           .+|++||+++.     +                         +...+.+.+-.++|++|+.... .......|..
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~-~~~~~~~Y~a  167 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA-GFPLAVHSGA  167 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT-CCTTCHHHHH
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccc-cccccccchh
Confidence                 56999998321     0                         1122445566788888764432 2333334433


Q ss_pred             hhH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCc----ceeecc----CCCCCCCcCHHHHHHHHHHHhhCCC--
Q 022625          208 GNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ----GFQFEE----GCAANGSLSKEDAAFICVEALESIP--  275 (294)
Q Consensus       208 ~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~----~~~~~~----g~~~~~~Is~eDvA~~iv~aL~~~~--  275 (294)
                      +|.  ..+.+.....+...||+++.|.||.+........    ...+..    .....-+..++|||.++++++.+..  
T Consensus       168 sKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s~~  247 (297)
T d1yxma1         168 ARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASF  247 (297)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            332  1233333344455899999999998763211000    000101    1112234578999999999996544  


Q ss_pred             CCCcEEEEecCC
Q 022625          276 QTGLIFEVCEIS  287 (294)
Q Consensus       276 ~~g~~~~v~~g~  287 (294)
                      ..|+++.|.+|-
T Consensus       248 iTG~~i~VDGG~  259 (297)
T d1yxma1         248 ITGQSVDVDGGR  259 (297)
T ss_dssp             CCSCEEEESTTG
T ss_pred             cCCcEEEeCcCh
Confidence            479999998874

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.67  E-value=1.8e-16  Score=139.77  Aligned_cols=193  Identities=10%  Similarity=0.053  Sum_probs=127.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---------CCCcEEeecCCCCHHHHHHHhc----
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---------GTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      .+.+|+++||||+++||+++++.|+++|++|++..|+++++.+..         +..+..+.+|++|+++++++++    
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999987654321         1257889999999988877664    


Q ss_pred             ---CCcEEEEcCCc-----------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhc
Q 022625          163 ---GVRSIICPSEG-----------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQAL  205 (294)
Q Consensus       163 ---~~d~Vi~~~~~-----------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~  205 (294)
                         .+|++||+++.                 +                 +...+++.+-..++++|+.+...+......|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y  161 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYY  161 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHH
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchh
Confidence               56999997210                 0                 1112334443444444555555555555566


Q ss_pred             cchhH--HHHHHHHHHHHHhCCCCEEEEEccceecCCC----CCc--ce-------eeccCCCCCCCcCHHHHHHHHHHH
Q 022625          206 MKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPG----GKQ--GF-------QFEEGCAANGSLSKEDAAFICVEA  270 (294)
Q Consensus       206 ~~~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~----~~~--~~-------~~~~g~~~~~~Is~eDvA~~iv~a  270 (294)
                      ..+|.  ..+.+.....+...||+++.|.||++.....    ...  ..       .........-+..++|+|.+++++
T Consensus       162 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL  241 (272)
T d1xkqa_         162 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL  241 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            54443  2233444455667899999999998752110    000  00       000111223356899999999998


Q ss_pred             hhCC--C-CCCcEEEEecCCc
Q 022625          271 LESI--P-QTGLIFEVCEISN  288 (294)
Q Consensus       271 L~~~--~-~~g~~~~v~~g~~  288 (294)
                      +..+  . ..|+++.|.+|-.
T Consensus       242 ~S~~as~~iTG~~i~vDGG~~  262 (272)
T d1xkqa_         242 ADRNLSFYILGQSIVADGGTS  262 (272)
T ss_dssp             HCHHHHTTCCSCEEEESTTGG
T ss_pred             hCcchhCCccCeEEEeCcCHH
Confidence            8643  3 4799999988854

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.67  E-value=2.3e-16  Score=139.36  Aligned_cols=192  Identities=11%  Similarity=0.103  Sum_probs=131.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---------CCCcEEeecCCCCHHHHHHHhc-----
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---------GTYVESMAGDASNKKFLKTALR-----  162 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~v~~v~~D~~d~~~l~~~l~-----  162 (294)
                      +.+|+++||||+++||++++++|+++|++|++..|+++++.+..         ..++..+.+|++|+++++++++     
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999987654321         1357889999999988877654     


Q ss_pred             --CCcEEEEcCCc---------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccch
Q 022625          163 --GVRSIICPSEG---------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       163 --~~d~Vi~~~~~---------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                        .+|++||+++.               +                 +...+++.+-.+++++||.....+......|..+
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~as  161 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACA  161 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHH
T ss_pred             cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhh
Confidence              56999997221               0                 1122455566788888887766655555566544


Q ss_pred             hH--HHHHHHHHHHHHhCCCCEEEEEccceecCC----CCCcc-----eee----ccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          209 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTP----GGKQG-----FQF----EEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       209 ~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~----~~~~~-----~~~----~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                      |.  ..+.+.....+...||+++.|.||++....    .....     ..+    .......-+..++|+|.++++++..
T Consensus       162 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~  241 (274)
T d1xhla_         162 KAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADR  241 (274)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCH
T ss_pred             hhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCC
Confidence            43  223444445556689999999999975211    00000     000    0111223345899999999998853


Q ss_pred             --CC-CCCcEEEEecCCc
Q 022625          274 --IP-QTGLIFEVCEISN  288 (294)
Q Consensus       274 --~~-~~g~~~~v~~g~~  288 (294)
                        .. ..|+++.|.+|-.
T Consensus       242 d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         242 NLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             HHHTTCCSCEEEESTTGG
T ss_pred             ccccCccCcEEEeCcCHH
Confidence              22 5799999988854

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=7.6e-16  Score=134.75  Aligned_cols=186  Identities=19%  Similarity=0.117  Sum_probs=120.9

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--------CCCcEEeecCCCCHHHHHHHhc----
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      ..+++|++|||||+++||+++++.|+++|++|++..|+++++.+..        +..+..+++|++|+++++++++    
T Consensus         6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~   85 (257)
T d1xg5a_           6 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS   85 (257)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            3477999999999999999999999999999999999987654421        2357889999999988877653    


Q ss_pred             ---CCcEEEEcCCc-----h-------------------------HHhhhhhcC--CCEEEEecccccccCC--CCchhc
Q 022625          163 ---GVRSIICPSEG-----F-------------------------ISNAGSLKG--VQHVILLSQLSVYRGS--GGIQAL  205 (294)
Q Consensus       163 ---~~d~Vi~~~~~-----~-------------------------~~~~~~~~g--v~r~V~vSs~~~~~~~--~~~~~~  205 (294)
                         ++|++||+++.     +                         +...+++.+  -.++|++||..+....  .....|
T Consensus        86 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y  165 (257)
T d1xg5a_          86 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFY  165 (257)
T ss_dssp             HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHH
T ss_pred             hcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHH
Confidence               56999998321     0                         111233333  4799999998875432  223334


Q ss_pred             cchhH--HHHHHHHHHHH--HhCCCCEEEEEccceecCCC----CCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCC-
Q 022625          206 MKGNA--RKLAEQDESML--MASGIPYTIIRTGVLQNTPG----GKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQ-  276 (294)
Q Consensus       206 ~~~~~--~~~~~~ae~~l--~~~gl~~tivRPg~l~~~~~----~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~-  276 (294)
                      ..+|.  ..+.+.....|  ...+++++.|.||.+.....    ...............+.+++|+|+++++++.++.. 
T Consensus       166 ~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~a~~  245 (257)
T d1xg5a_         166 SATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHI  245 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTTE
T ss_pred             HHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHHHHHhCChhcC
Confidence            33332  11223222333  34789999999998762211    11100111112234567899999999999988753 


Q ss_pred             -CCcE
Q 022625          277 -TGLI  280 (294)
Q Consensus       277 -~g~~  280 (294)
                       .|++
T Consensus       246 itG~i  250 (257)
T d1xg5a_         246 QIGDI  250 (257)
T ss_dssp             EEEEE
T ss_pred             eECCE
Confidence             4544

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=5.5e-16  Score=134.71  Aligned_cols=190  Identities=14%  Similarity=0.106  Sum_probs=132.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHHh---cCCcEEEEcCC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTAL---RGVRSIICPSE  172 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~l---~~~d~Vi~~~~  172 (294)
                      +.+|+++||||+++||+++++.|+++|++|+++.|+++++.+... .+++...+|+.+.+.++...   .+.|++||+.+
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag   83 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence            678999999999999999999999999999999999987766543 46888899999887666554   46799999822


Q ss_pred             c-----h-------------------------HHhhhhhcCCCEEEEecccccc-cCCCCchhccchhH--HHHHHHHHH
Q 022625          173 G-----F-------------------------ISNAGSLKGVQHVILLSQLSVY-RGSGGIQALMKGNA--RKLAEQDES  219 (294)
Q Consensus       173 ~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~-~~~~~~~~~~~~~~--~~~~~~ae~  219 (294)
                      .     +                         +...+.+.+-.++|++||..+. .+......|..+|.  ..+.+....
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~lA~  163 (245)
T d2ag5a1          84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAA  163 (245)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHHHHHHHHH
Confidence            1     0                         1222455667799999987653 34444455544443  123344444


Q ss_pred             HHHhCCCCEEEEEccceecCCCC-------Cc----ceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          220 MLMASGIPYTIIRTGVLQNTPGG-------KQ----GFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       220 ~l~~~gl~~tivRPg~l~~~~~~-------~~----~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      .+..+||+++.|.||++. .+..       ..    ...+.......-+..++|+|.++.+++.+..  ..|+.+.|.+|
T Consensus       164 e~~~~gIrvN~I~PG~i~-T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG  242 (245)
T d2ag5a1         164 DFIQQGIRCNCVCPGTVD-TPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGG  242 (245)
T ss_dssp             HHGGGTEEEEEEEESCEE-CHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             HhhhhCcEEEEEeeceee-chhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCceEEeCCC
Confidence            456689999999999875 2210       00    0001111222345689999999999987544  47899999877


Q ss_pred             C
Q 022625          287 S  287 (294)
Q Consensus       287 ~  287 (294)
                      -
T Consensus       243 ~  243 (245)
T d2ag5a1         243 W  243 (245)
T ss_dssp             G
T ss_pred             c
Confidence            4

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.66  E-value=9.8e-16  Score=133.83  Aligned_cols=191  Identities=12%  Similarity=0.074  Sum_probs=130.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cC-CCcEEeecCCC-CHHHHHHHh------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDAS-NKKFLKTAL------  161 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~-~~v~~v~~D~~-d~~~l~~~l------  161 (294)
                      ++.+|+|+||||+++||++++++|+++|++|+++.|+.++....      .+ .++.++.+|++ +.+++++++      
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999998877653221      22 36888999997 655565544      


Q ss_pred             -cCCcEEEEcCCc-----h-----------------HHhhhhhc---CCCEEEEecccccccCCCCchhccchhH--HHH
Q 022625          162 -RGVRSIICPSEG-----F-----------------ISNAGSLK---GVQHVILLSQLSVYRGSGGIQALMKGNA--RKL  213 (294)
Q Consensus       162 -~~~d~Vi~~~~~-----~-----------------~~~~~~~~---gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~  213 (294)
                       ..+|++|++++.     +                 +...+.+.   ...++|++||..+..+......|..+|.  ..+
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~  161 (254)
T d1sbya1          82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSF  161 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHH
Confidence             356999998432     1                 12223222   3478999999998877776667765553  223


Q ss_pred             HHHHHHHHHhCCCCEEEEEccceecCC----CCCcce--eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEEEecCC
Q 022625          214 AEQDESMLMASGIPYTIIRTGVLQNTP----GGKQGF--QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEIS  287 (294)
Q Consensus       214 ~~~ae~~l~~~gl~~tivRPg~l~~~~----~~~~~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g~  287 (294)
                      .+.....+...|++++.|.||++....    ......  .+..........+.|++|++++.+++.. ..|.++.+.+|.
T Consensus       162 t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~~-~tG~vi~vdgG~  240 (254)
T d1sbya1         162 TNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEAN-KNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHHC-CTTCEEEEETTE
T ss_pred             HHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhCC-CCCCEEEECCCE
Confidence            344445566789999999999876211    000000  0000011223457899999999988764 578999998875

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.65  E-value=6.3e-16  Score=134.85  Aligned_cols=190  Identities=11%  Similarity=0.072  Sum_probs=127.5

Q ss_pred             cCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCccchhhh-----cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           96 EEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG--~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      ++.+|+++||||+|  +||++++++|+++|++|++..|+++...+.     .......+.+|++|+++++++++      
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence            46799999999998  899999999999999999888886532221     12357789999999988877664      


Q ss_pred             -CCcEEEEcCCc---------h---------------------HHh----hhhhcCCCEEEEecccccccCCCCchhccc
Q 022625          163 -GVRSIICPSEG---------F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMK  207 (294)
Q Consensus       163 -~~d~Vi~~~~~---------~---------------------~~~----~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~  207 (294)
                       +.|++||+.+.         +                     +..    .+++  -.++|++||..+..+......|..
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~~~~Y~a  162 (256)
T d1ulua_          85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAI  162 (256)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHHH
T ss_pred             CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCCchHHHH
Confidence             46999997220         0                     000    1122  258999999988776666666655


Q ss_pred             hhH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----e--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CC
Q 022625          208 GNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----F--QFEEGCAANGSLSKEDAAFICVEALESIP--QT  277 (294)
Q Consensus       208 ~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~  277 (294)
                      +|.  ..+.+.....+...|++++.|.||.+.........    .  .+.......-+..++|+|.++++++.+..  ..
T Consensus       163 sKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~it  242 (256)
T d1ulua_         163 AKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGIT  242 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcc
Confidence            443  22334444555668999999999987632211100    0  00011122345689999999999987544  57


Q ss_pred             CcEEEEecCC
Q 022625          278 GLIFEVCEIS  287 (294)
Q Consensus       278 g~~~~v~~g~  287 (294)
                      |+++.|.+|-
T Consensus       243 G~~i~VDGG~  252 (256)
T d1ulua_         243 GEVVYVDAGY  252 (256)
T ss_dssp             SCEEEESTTG
T ss_pred             CCeEEECcCE
Confidence            8999998774

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.64  E-value=3.8e-16  Score=136.24  Aligned_cols=192  Identities=11%  Similarity=0.007  Sum_probs=129.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH-------hcCCcEEEEcCC-
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-------LRGVRSIICPSE-  172 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-------l~~~d~Vi~~~~-  172 (294)
                      |++||||+++||+.++++|+++|++|++..|+.+++.+.......+..+|++|.++++++       +..+|++||+++ 
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~   81 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF   81 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence            789999999999999999999999999999988776544322223445677666444433       346799998621 


Q ss_pred             ----c-h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH--HHHHHHHHHH
Q 022625          173 ----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESM  220 (294)
Q Consensus       173 ----~-~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~~ae~~  220 (294)
                          + +                         +...+++.+-.+||++||..+..+......|..+|.  ..+.+.....
T Consensus        82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e  161 (252)
T d1zmta1          82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKE  161 (252)
T ss_dssp             CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHHHHHH
Confidence                0 1                         112355667789999999988776666666655543  2234444455


Q ss_pred             HHhCCCCEEEEEccceecCCCCCcc-e-----------eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecC
Q 022625          221 LMASGIPYTIIRTGVLQNTPGGKQG-F-----------QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEI  286 (294)
Q Consensus       221 l~~~gl~~tivRPg~l~~~~~~~~~-~-----------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g  286 (294)
                      +...||+++.|.||++......... .           .+.......-+..++|||.++++++.+..  ..|+.+.|.+|
T Consensus       162 la~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG  241 (252)
T d1zmta1         162 LGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG  241 (252)
T ss_dssp             HGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             hcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            6678999999999987632211100 0           00001112235689999999999997655  47999999998


Q ss_pred             Cccccc
Q 022625          287 SNLCEQ  292 (294)
Q Consensus       287 ~~~~~e  292 (294)
                      -..+..
T Consensus       242 ~~~~~~  247 (252)
T d1zmta1         242 FPMIER  247 (252)
T ss_dssp             CCCCCC
T ss_pred             ceeCCC
Confidence            665543

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.64  E-value=7.2e-16  Score=133.65  Aligned_cols=191  Identities=16%  Similarity=0.140  Sum_probs=125.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCcE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS  166 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d~  166 (294)
                      +.+|+++||||+++||++++++|+++|++|++..|+.+++.+.   .+.++.++++|++++++++++++       .+|+
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            5789999999999999999999999999999999999876543   34578889999999988877654       5699


Q ss_pred             EEEcCCc-----h---------------------HHhh-hh-hcCCCEEEEecccccccCCCCchhccchhH--HHHHHH
Q 022625          167 IICPSEG-----F---------------------ISNA-GS-LKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQ  216 (294)
Q Consensus       167 Vi~~~~~-----~---------------------~~~~-~~-~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~~  216 (294)
                      +||+++.     +                     +..+ .. ..+-+.++++|+.+... ......|...|.  ..+.+.
T Consensus        83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~-~~~~~~Y~~sK~al~~lt~~  161 (241)
T d2a4ka1          83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG-AFGLAHYAAGKLGVVGLART  161 (241)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC-HHHHHHHHHCSSHHHHHHHH
T ss_pred             eccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccc-ccCccccchhhHHHHHHHHH
Confidence            9997211     0                     1111 11 12334566666554332 223333433332  223344


Q ss_pred             HHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCCc
Q 022625          217 DESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEISN  288 (294)
Q Consensus       217 ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~~  288 (294)
                      ....+...|++++.|.||++.........    ..+........+..++|+|+++++++.+..  ..|+++.+.+|-.
T Consensus       162 lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         162 LALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             HHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEeCCCcc
Confidence            44445668999999999987522111100    011112223445689999999999997544  5789999988743

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.64  E-value=1.3e-15  Score=134.44  Aligned_cols=189  Identities=16%  Similarity=0.140  Sum_probs=128.0

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc-------CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~-------~~d  165 (294)
                      .+.+|+++||||+++||++++++|+++|++|+++.|+++++.+.   .+..+..+.+|+++.++++++++       .+|
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id   81 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKID   81 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcc
Confidence            35789999999999999999999999999999999998876543   34578899999999988877653       569


Q ss_pred             EEEEcCC-----c-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH
Q 022625          166 SIICPSE-----G-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       166 ~Vi~~~~-----~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                      ++|++++     .             +                 +...+++.+ .++|+++|..+..+......|..+|.
T Consensus        82 ilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y~asKa  160 (276)
T d1bdba_          82 TLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKH  160 (276)
T ss_dssp             EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHHHHHHH
T ss_pred             cccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchHHHHHH
Confidence            9998722     0             0                 112244444 68999988877666555556655443


Q ss_pred             --HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCc-------ce-------eeccCCCCCCCcCHHHHHHHHHHHhhC-
Q 022625          211 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQ-------GF-------QFEEGCAANGSLSKEDAAFICVEALES-  273 (294)
Q Consensus       211 --~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~-------~~-------~~~~g~~~~~~Is~eDvA~~iv~aL~~-  273 (294)
                        ..+.+.....+. .+++++.|.||++........       ..       .+.......-+..++|+|.++++++.. 
T Consensus       161 al~~ltr~lA~ela-~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~~  239 (276)
T d1bdba_         161 AIVGLVRELAFELA-PYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRG  239 (276)
T ss_dssp             HHHHHHHHHHHHHT-TTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCHH
T ss_pred             HHHHHHHHHHHHhh-cceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCc
Confidence              123333333343 459999999998753211000       00       000111112345789999999998853 


Q ss_pred             -CC-CCCcEEEEecC
Q 022625          274 -IP-QTGLIFEVCEI  286 (294)
Q Consensus       274 -~~-~~g~~~~v~~g  286 (294)
                       .. ..|+.+.|.+|
T Consensus       240 ~a~~itG~~i~VDGG  254 (276)
T d1bdba_         240 DAAPATGALLNYDGG  254 (276)
T ss_dssp             HHTTCSSCEEEESSS
T ss_pred             ccCCeeCcEEEECcC
Confidence             22 57999999776

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.64  E-value=6.9e-15  Score=128.12  Aligned_cols=178  Identities=16%  Similarity=0.198  Sum_probs=120.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc---hhh------hcCCCcEEeecCCCCHHHHHHHhcC----
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---AME------SFGTYVESMAGDASNKKFLKTALRG----  163 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~---~~~------~~~~~v~~v~~D~~d~~~l~~~l~~----  163 (294)
                      +..++|||||+|+||++++++|+++|+ +|+++.|+..+   ..+      ..+..+.++.+|++|.++++++++.    
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence            346999999999999999999999999 57888886432   111      1234688999999999999888764    


Q ss_pred             --CcEEEEcCCc-----h---------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHH
Q 022625          164 --VRSIICPSEG-----F---------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE  215 (294)
Q Consensus       164 --~d~Vi~~~~~-----~---------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~  215 (294)
                        .|.|||+.+.     +                     +..++...+..+||++||..+..+..+...|...|.  ...
T Consensus        88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka--~l~  165 (259)
T d2fr1a1          88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNA--YLD  165 (259)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHH--HHH
T ss_pred             ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccHHHHHHHH--hHH
Confidence              4889987221     0                     233455567789999999988766666656644332  222


Q ss_pred             HHHHHHHhCCCCEEEEEccceecC-CCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCCCCC
Q 022625          216 QDESMLMASGIPYTIIRTGVLQNT-PGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTG  278 (294)
Q Consensus       216 ~ae~~l~~~gl~~tivRPg~l~~~-~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g  278 (294)
                      .....++..|++++.|.||.+.+. ........ .........++.+++++++..++..+....
T Consensus       166 ~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~~~~-~~~~~G~~~~~~~~~~~~l~~~l~~~~~~~  228 (259)
T d2fr1a1         166 GLAQQRRSDGLPATAVAWGTWAGSGMAEGPVAD-RFRRHGVIEMPPETACRALQNALDRAEVCP  228 (259)
T ss_dssp             HHHHHHHHTTCCCEEEEECCBC-------------CTTTTEECBCHHHHHHHHHHHHHTTCSSC
T ss_pred             HHHHHHHhCCCCEEECCCCcccCCccccchHHH-HHHhcCCCCCCHHHHHHHHHHHHhCCCceE
Confidence            233445678999999999987621 11111000 011122346899999999999998765443

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.63  E-value=1.4e-15  Score=133.11  Aligned_cols=192  Identities=13%  Similarity=0.132  Sum_probs=127.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCHHHHHHHhc------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      +..+|++|||||+++||++++++|+++|++|+++.|+.+++.+.       .+.++..+.+|++|+++++++++      
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   85 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            56799999999999999999999999999999999998764332       34578899999999988877764      


Q ss_pred             -CCcEEEEcCCc-----h-------------------------HHhhh-hhcCCCEEEEecccccccCC-------CCch
Q 022625          163 -GVRSIICPSEG-----F-------------------------ISNAG-SLKGVQHVILLSQLSVYRGS-------GGIQ  203 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~-------------------------~~~~~-~~~gv~r~V~vSs~~~~~~~-------~~~~  203 (294)
                       .+|++||+++.     +                         +...+ ++.+-.+++.+|+.......       ....
T Consensus        86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~  165 (260)
T d1h5qa_          86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV  165 (260)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCH
T ss_pred             CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCcccc
Confidence             45999997321     0                         11223 33455667777765543221       1222


Q ss_pred             hccchhH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccCCCCCCCcCHHHHHHHHHHHhhCCC--
Q 022625          204 ALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEGCAANGSLSKEDAAFICVEALESIP--  275 (294)
Q Consensus       204 ~~~~~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--  275 (294)
                      .|..+|.  ..+.+.....+...|++++.|.||++.........    ..+.......-+..++|+|.++++++.+..  
T Consensus       166 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~  245 (260)
T d1h5qa_         166 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATY  245 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             chhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcchhCC
Confidence            3433332  22334444455668999999999997621110000    001111222335689999999999886544  


Q ss_pred             CCCcEEEEecCC
Q 022625          276 QTGLIFEVCEIS  287 (294)
Q Consensus       276 ~~g~~~~v~~g~  287 (294)
                      ..|+++.|.+|-
T Consensus       246 itG~~i~VDGG~  257 (260)
T d1h5qa_         246 MTGGEYFIDGGQ  257 (260)
T ss_dssp             CCSCEEEECTTG
T ss_pred             CcCceEEECCCe
Confidence            479999998875

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.61  E-value=3.1e-15  Score=130.79  Aligned_cols=190  Identities=14%  Similarity=0.092  Sum_probs=123.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhh------hcCCCcEEeecCCCCHHHHHHHhc------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR------  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~------~~~~~v~~v~~D~~d~~~l~~~l~------  162 (294)
                      .+.||+||||||+++||++++++|+++|++|++..|+.++ +.+      ..+.++..+.+|++|.+++++.++      
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            3679999999999999999999999999999987765543 221      123478899999999988877664      


Q ss_pred             -CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEeccccc-ccCCCCchhccchhH
Q 022625          163 -GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSV-YRGSGGIQALMKGNA  210 (294)
Q Consensus       163 -~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~-~~~~~~~~~~~~~~~  210 (294)
                       ..|++||+.+.     +                         +...+++.  .++++++|..+ ..+......|..+|.
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~Y~asK~  160 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAGSKA  160 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHHHHHHHH
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCchhHHHHHH
Confidence             56999998221     0                         11123333  36666665544 333334444444332


Q ss_pred             --HHHHHHHHHHHHhCCCCEEEEEccceecC---------CCC-Ccce-------eeccCCCCCCCcCHHHHHHHHHHHh
Q 022625          211 --RKLAEQDESMLMASGIPYTIIRTGVLQNT---------PGG-KQGF-------QFEEGCAANGSLSKEDAAFICVEAL  271 (294)
Q Consensus       211 --~~~~~~ae~~l~~~gl~~tivRPg~l~~~---------~~~-~~~~-------~~~~g~~~~~~Is~eDvA~~iv~aL  271 (294)
                        ..+.+.....+...|++++.|.||++...         ... ....       .+.......-+..++|||+++++++
T Consensus       161 al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~  240 (259)
T d1ja9a_         161 AVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALC  240 (259)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHh
Confidence              22334444445668999999999987511         000 0000       0001122234678999999999998


Q ss_pred             hCCC--CCCcEEEEecCC
Q 022625          272 ESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       272 ~~~~--~~g~~~~v~~g~  287 (294)
                      .+..  ..|+.+.+.+|.
T Consensus       241 S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         241 QEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             SGGGTTCCSCEEEESTTC
T ss_pred             CchhcCCcCceEEeCCCC
Confidence            7655  479999998874

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.5e-14  Score=123.75  Aligned_cols=188  Identities=14%  Similarity=0.089  Sum_probs=125.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHh-------cCCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTAL-------RGVR  165 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l-------~~~d  165 (294)
                      +++||+++||||+++||++++++|+++|++|+++.|+.+++.+.   ..........|+.+...+++..       ...|
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD   81 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccc
Confidence            46899999999999999999999999999999999998775543   3456778888998876655443       3457


Q ss_pred             EEEEc-----CCc--------------h-------------HHhhh----------hhcCCCEEEEecccccccCCCCch
Q 022625          166 SIICP-----SEG--------------F-------------ISNAG----------SLKGVQHVILLSQLSVYRGSGGIQ  203 (294)
Q Consensus       166 ~Vi~~-----~~~--------------~-------------~~~~~----------~~~gv~r~V~vSs~~~~~~~~~~~  203 (294)
                      .+++.     ..+              +             +..++          +..+-.+||++||..+..+..+..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~  161 (248)
T d2o23a1          82 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA  161 (248)
T ss_dssp             EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred             ccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCch
Confidence            77764     110              0             11111          112345899999998887766666


Q ss_pred             hccchhH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCC----cceeeccCCCC-CCCcCHHHHHHHHHHHhhCCCC
Q 022625          204 ALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGFQFEEGCAA-NGSLSKEDAAFICVEALESIPQ  276 (294)
Q Consensus       204 ~~~~~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----~~~~~~~g~~~-~~~Is~eDvA~~iv~aL~~~~~  276 (294)
                      .|..+|.  ..+.+.....+...|++++.|.||++.......    ....+...... .-+.+++|||.+++++++.+-.
T Consensus       162 ~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~s~~~i  241 (248)
T d2o23a1         162 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIENPFL  241 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhCCCC
Confidence            6655543  223344445556689999999999876321111    00111111111 2356899999999999886556


Q ss_pred             CCcEEEE
Q 022625          277 TGLIFEV  283 (294)
Q Consensus       277 ~g~~~~v  283 (294)
                      .|++.+|
T Consensus       242 tGq~I~v  248 (248)
T d2o23a1         242 NGEVIRL  248 (248)
T ss_dssp             CSCEEEE
T ss_pred             CceEeEC
Confidence            7887765

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.60  E-value=6.4e-16  Score=138.38  Aligned_cols=186  Identities=12%  Similarity=-0.008  Sum_probs=124.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc---------hhhh---cCCCcEEeecCCCCHHHHHHHh--
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---------AMES---FGTYVESMAGDASNKKFLKTAL--  161 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~---------~~~~---~~~~v~~v~~D~~d~~~l~~~l--  161 (294)
                      .+.+|+++||||+++||++++++|+++|++|++.+|+.+.         +.+.   .........+|+.|.+.+++.+  
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~   83 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT   83 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHH
Confidence            4679999999999999999999999999999998876542         1111   1123345566777765444433  


Q ss_pred             -----cCCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhcc
Q 022625          162 -----RGVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALM  206 (294)
Q Consensus       162 -----~~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~  206 (294)
                           ..+|++||+++.     +                         +...+++.+-.+||++||..+..+......|.
T Consensus        84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~  163 (302)
T d1gz6a_          84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYS  163 (302)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHH
Confidence                 367999998321     0                         22235666778999999998876666666665


Q ss_pred             chhH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC-CCCcEEEE
Q 022625          207 KGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP-QTGLIFEV  283 (294)
Q Consensus       207 ~~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~-~~g~~~~v  283 (294)
                      .+|.  ..+.+.....+...||+++.|.||.+.......      ..+.....+.++|+|.++++++.... ..|+++.+
T Consensus       164 asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~------~~~~~~~~~~PedvA~~v~fL~S~~a~itG~~i~v  237 (302)
T d1gz6a_         164 AAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETV------MPEDLVEALKPEYVAPLVLWLCHESCEENGGLFEV  237 (302)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGG------SCHHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhc------CcHhhHhcCCHHHHHHHHHHHcCCCcCCCCcEEEe
Confidence            5543  223333444455689999999999875221110      01111234578999999999886443 57899999


Q ss_pred             ecCC
Q 022625          284 CEIS  287 (294)
Q Consensus       284 ~~g~  287 (294)
                      .+|-
T Consensus       238 dGG~  241 (302)
T d1gz6a_         238 GAGW  241 (302)
T ss_dssp             ETTE
T ss_pred             CCCc
Confidence            8873

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.60  E-value=6.9e-15  Score=129.35  Aligned_cols=192  Identities=9%  Similarity=0.037  Sum_probs=126.2

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch-hh------hcCCCcEEeecCCCCHHHHHHHhc----
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-ME------SFGTYVESMAGDASNKKFLKTALR----  162 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~-~~------~~~~~v~~v~~D~~d~~~l~~~l~----  162 (294)
                      ..++.+|+++||||+++||+++++.|+++|++|++.+|+.++. .+      ..+..+.++.+|++|++++.+.++    
T Consensus        13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999998875432 21      123468889999999988876654    


Q ss_pred             ---CCcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccc-cCCCCchhccch
Q 022625          163 ---GVRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVY-RGSGGIQALMKG  208 (294)
Q Consensus       163 ---~~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~-~~~~~~~~~~~~  208 (294)
                         ..|++|++.+.     +                         +...+.+.  .++++++|.... .+......|..+
T Consensus        93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~~~~~~~~~~Y~as  170 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHAVYSGS  170 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGTCSSCSSCHHHHHH
T ss_pred             HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc--cccccccccccccccccchhhHHHH
Confidence               56999998221     0                         11112332  577777766543 334444445333


Q ss_pred             hH--HHHHHHHHHHHHhCCCCEEEEEccceecCC---------CCCcce--------eeccCCCCCCCcCHHHHHHHHHH
Q 022625          209 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNTP---------GGKQGF--------QFEEGCAANGSLSKEDAAFICVE  269 (294)
Q Consensus       209 ~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~---------~~~~~~--------~~~~g~~~~~~Is~eDvA~~iv~  269 (294)
                      |+  ..+.+.....+...||+++.|.||.+....         ......        .........-+..++|||.++++
T Consensus       171 Kaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~f  250 (272)
T d1g0oa_         171 KGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCF  250 (272)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHH
Confidence            32  223344444456689999999999875210         000000        00111222456789999999999


Q ss_pred             HhhCCC--CCCcEEEEecCC
Q 022625          270 ALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       270 aL~~~~--~~g~~~~v~~g~  287 (294)
                      ++...+  ..|+++.|.+|-
T Consensus       251 L~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         251 LASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HhCchhcCccCceEeECCCC
Confidence            987544  479999998874

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.59  E-value=4.3e-15  Score=130.04  Aligned_cols=175  Identities=19%  Similarity=0.135  Sum_probs=117.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCC--cEEEEcCCc----
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPSEG----  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~--d~Vi~~~~~----  173 (294)
                      |+|||||||||||++|+++|.++|+.|. +.+...           .+.+|++|.+.+++++++.  |+|||+++-    
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v~-~~~~~~-----------~~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~   68 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLIA-LDVHSK-----------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD   68 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEEE-ECTTCS-----------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEE-EECCCc-----------cccCcCCCHHHHHHHHHHcCCCEEEEeccccccc
Confidence            6899999999999999999999987554 443321           1357999999999998754  999998321    


Q ss_pred             ------------------hHHhhhhhcCCCEEEEecccccccCCCC--c---hhccc-hhHHHHHHHHHHHHHhCCCCEE
Q 022625          174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QALMK-GNARKLAEQDESMLMASGIPYT  229 (294)
Q Consensus       174 ------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~--~---~~~~~-~~~~~~~~~ae~~l~~~gl~~t  229 (294)
                                        .+.+++++.+ .+++++||..++.....  .   .+..+ ......+..+|.++......+.
T Consensus        69 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~~~~~~  147 (298)
T d1n2sa_          69 KAESEPELAQLLNATSVEAIAKAANETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHL  147 (298)
T ss_dssp             HHTTCHHHHHHHHTHHHHHHHHHHTTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCSSEE
T ss_pred             ccccCccccccccccccccchhhhhccc-cccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhhhcccc
Confidence                              1444566666 46788888766542211  1   11111 1223345678888888777888


Q ss_pred             EEEccceecCCCCCc-----------ceeeccCCCCCCCcCHHHHHHHHHHHhh---CCCCCCcEEEEecCC
Q 022625          230 IIRTGVLQNTPGGKQ-----------GFQFEEGCAANGSLSKEDAAFICVEALE---SIPQTGLIFEVCEIS  287 (294)
Q Consensus       230 ivRPg~l~~~~~~~~-----------~~~~~~g~~~~~~Is~eDvA~~iv~aL~---~~~~~g~~~~v~~g~  287 (294)
                      ++|++.++.+.+...           ......+.....+++..|+++++..++.   .....+.+||+++++
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~  219 (298)
T d1n2sa_         148 IFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGG  219 (298)
T ss_dssp             EEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBS
T ss_pred             cccccceeeccCCccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhccccccccccccCCC
Confidence            888887664443211           1122244556778999999999888775   234557899998864

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=1.4e-14  Score=128.37  Aligned_cols=177  Identities=17%  Similarity=0.184  Sum_probs=118.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE---EcCccchh---hh------cCCCcEEeecCCCCHHHHHHHhcC---
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL---VKDKRNAM---ES------FGTYVESMAGDASNKKFLKTALRG---  163 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~---~R~~~~~~---~~------~~~~v~~v~~D~~d~~~l~~~l~~---  163 (294)
                      +|.|+||||+++||++++++|+++|++|+.+   .|+.+...   +.      .+..+..+.+|++|.+++.++++.   
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            4678999999999999999999999876555   44443321   11      234788999999999999887753   


Q ss_pred             --CcEEEEcCCc-----h-------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhH-
Q 022625          164 --VRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-  210 (294)
Q Consensus       164 --~d~Vi~~~~~-----~-------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~-  210 (294)
                        .|+++++.+.     +                         +...+++.+-.+||++||..+..+......|..+|+ 
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaa  161 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA  161 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHH
Confidence              4999997220     0                         222356677789999999988877766667755553 


Q ss_pred             -HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc----eeeccC-----------------CCCCCCcCHHHHHHHHH
Q 022625          211 -RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG----FQFEEG-----------------CAANGSLSKEDAAFICV  268 (294)
Q Consensus       211 -~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~----~~~~~g-----------------~~~~~~Is~eDvA~~iv  268 (294)
                       ..+.+.....+...|++++.|.||++.........    ......                 .......+++|||++++
T Consensus       162 l~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~  241 (285)
T d1jtva_         162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFL  241 (285)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHH
Confidence             22334444556678999999999987632111000    000000                 00012457999999999


Q ss_pred             HHhhCCC
Q 022625          269 EALESIP  275 (294)
Q Consensus       269 ~aL~~~~  275 (294)
                      ++++.+.
T Consensus       242 ~~~~~~~  248 (285)
T d1jtva_         242 TALRAPK  248 (285)
T ss_dssp             HHHHCSS
T ss_pred             HHHhCCC
Confidence            9998754

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.56  E-value=3.8e-14  Score=122.82  Aligned_cols=177  Identities=14%  Similarity=0.138  Sum_probs=115.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHH---HCCCeEEEEEcCccchhhh-----cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLI---VKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~---~~g~~V~~~~R~~~~~~~~-----~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      .||+||||||+++||++++++|+   ++|++|++.+|+++++.+.     ...++.++.+|++|.++++++++       
T Consensus         1 ~MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   80 (248)
T d1snya_           1 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK   80 (248)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence            47999999999999999999997   4799999999998875443     23578999999999877765443       


Q ss_pred             --CCcEEEEcCCc------h-------------------------HHhhhhh-----------cCCCEEEEeccccccc-
Q 022625          163 --GVRSIICPSEG------F-------------------------ISNAGSL-----------KGVQHVILLSQLSVYR-  197 (294)
Q Consensus       163 --~~d~Vi~~~~~------~-------------------------~~~~~~~-----------~gv~r~V~vSs~~~~~-  197 (294)
                        .+|++|++++.      +                         +...+++           .+-.++|++||..+.. 
T Consensus        81 ~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          81 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             cCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence              46999997220      0                         1111222           2457899999976542 


Q ss_pred             --CCCCchhccchhH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          198 --GSGGIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       198 --~~~~~~~~~~~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                        +..+...|..+|.  ..+.+.....+...|++++.|.||++.......           .....+++.+..++..+..
T Consensus       161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~-----------~~~~~~~~~~~~i~~~i~~  229 (248)
T d1snya_         161 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------SAPLDVPTSTGQIVQTISK  229 (248)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------TCSBCHHHHHHHHHHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccc-----------cCCCCchHHHHHHHHHHHh
Confidence              2333445655543  123344444566789999999999987332211           1223455555555555543


Q ss_pred             --CCCCCcEEEEec
Q 022625          274 --IPQTGLIFEVCE  285 (294)
Q Consensus       274 --~~~~g~~~~v~~  285 (294)
                        +...|+.++..+
T Consensus       230 l~~~~tG~~i~~dG  243 (248)
T d1snya_         230 LGEKQNGGFVNYDG  243 (248)
T ss_dssp             CCGGGTTCEECTTS
T ss_pred             cCccCCCcEEEECC
Confidence              234677776633

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.55  E-value=1.1e-14  Score=127.15  Aligned_cols=186  Identities=15%  Similarity=0.081  Sum_probs=121.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEEcCccchhhhc--------CCCcEEeecCCCCHHHHHHHhc--
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR--  162 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~---~g~~V~~~~R~~~~~~~~~--------~~~v~~v~~D~~d~~~l~~~l~--  162 (294)
                      .+.+|+++||||+++||++++++|++   +|++|+++.|+++++.+..        +.++..+.+|++|+++++++++  
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            45789999999999999999999986   7999999999987754431        2367889999999988877753  


Q ss_pred             ---------CCcEEEEcCC-------ch--------------------------HHhhhhhcC--CCEEEEecccccccC
Q 022625          163 ---------GVRSIICPSE-------GF--------------------------ISNAGSLKG--VQHVILLSQLSVYRG  198 (294)
Q Consensus       163 ---------~~d~Vi~~~~-------~~--------------------------~~~~~~~~g--v~r~V~vSs~~~~~~  198 (294)
                               ..|+++++.+       +.                          +...+++.+  -.++|++||..+..+
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence                     2367777521       10                          111233333  358999999988777


Q ss_pred             CCCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCC------CCcc-e--eeccCCCCCCCcCHHHHHHHH
Q 022625          199 SGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPG------GKQG-F--QFEEGCAANGSLSKEDAAFIC  267 (294)
Q Consensus       199 ~~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~------~~~~-~--~~~~g~~~~~~Is~eDvA~~i  267 (294)
                      ......|..+|.-  .+.+...  ....|++++.|.||.+.....      .... .  .+..-.......+++|+|+++
T Consensus       163 ~~~~~~Y~asKaal~~lt~~la--~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i  240 (259)
T d1oaaa_         163 YKGWGLYCAGKAARDMLYQVLA--AEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL  240 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHH--HHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHH--hCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            6666667555431  1122111  124789999999998762110      0000 0  000001123457899999999


Q ss_pred             HHHhhCCC-CCCcEEEE
Q 022625          268 VEALESIP-QTGLIFEV  283 (294)
Q Consensus       268 v~aL~~~~-~~g~~~~v  283 (294)
                      +.++.+.. ..|+.+++
T Consensus       241 ~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         241 LGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHCCSCTTEEEET
T ss_pred             HHHhhhccCCCCCeEEe
Confidence            99997654 45776665

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.54  E-value=6.2e-14  Score=120.10  Aligned_cols=182  Identities=16%  Similarity=0.199  Sum_probs=120.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc------CCcEEEEcCC-
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICPSE-  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~------~~d~Vi~~~~-  172 (294)
                      |++|||||+++||++++++|+++|++|++..|+++..      +...+.+|+++......+..      ..+.+++... 
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE------DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGV   75 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc------cceEeeccccchhhhHHHHHhhhccccccchhhhhhc
Confidence            8999999999999999999999999999999987643      35677899998866655443      2233333200 


Q ss_pred             -------c---------h-----------------HHhh------hhhcCCCEEEEecccccccCCCCchhccchhH--H
Q 022625          173 -------G---------F-----------------ISNA------GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R  211 (294)
Q Consensus       173 -------~---------~-----------------~~~~------~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~  211 (294)
                             +         +                 +...      +.+.+-.+||++||..+..+......|..+|.  .
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~  155 (241)
T d1uaya_          76 GLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVV  155 (241)
T ss_dssp             CCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             cccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHHHHHH
Confidence                   0         0                 0001      22334569999999988776666666655543  2


Q ss_pred             HHHHHHHHHHHhCCCCEEEEEccceecCC----CCCcceeeccCCCC-CCCcCHHHHHHHHHHHhhCCCCCCcEEEEecC
Q 022625          212 KLAEQDESMLMASGIPYTIIRTGVLQNTP----GGKQGFQFEEGCAA-NGSLSKEDAAFICVEALESIPQTGLIFEVCEI  286 (294)
Q Consensus       212 ~~~~~ae~~l~~~gl~~tivRPg~l~~~~----~~~~~~~~~~g~~~-~~~Is~eDvA~~iv~aL~~~~~~g~~~~v~~g  286 (294)
                      .+.+.....+..+|++++.|.||++....    .......+...... .-+..++|+|.+++++++.+-..|+++.|.+|
T Consensus       156 ~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG  235 (241)
T d1uaya_         156 ALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENPMLNGEVVRLDGA  235 (241)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhCCCCCCCEEEECCc
Confidence            23344445556689999999999975211    10000001111111 23458999999999999865568999999887


Q ss_pred             C
Q 022625          287 S  287 (294)
Q Consensus       287 ~  287 (294)
                      -
T Consensus       236 ~  236 (241)
T d1uaya_         236 L  236 (241)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.51  E-value=1.6e-13  Score=119.03  Aligned_cols=175  Identities=18%  Similarity=0.161  Sum_probs=111.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhc---------C
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR---------G  163 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~---------~  163 (294)
                      ..|+||||||+++||++++++|+++|+  .|++.+|+.+++.++   .+.+++++.+|++|.++++++++         +
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~   81 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCC
Confidence            459999999999999999999999995  688889998876654   33578999999999988776542         3


Q ss_pred             CcEEEEcCCc--------------h-----------------HHhhhhhc-----------CCCEEEEecccccccCC--
Q 022625          164 VRSIICPSEG--------------F-----------------ISNAGSLK-----------GVQHVILLSQLSVYRGS--  199 (294)
Q Consensus       164 ~d~Vi~~~~~--------------~-----------------~~~~~~~~-----------gv~r~V~vSs~~~~~~~--  199 (294)
                      .|++|++++-              +                 +...+++.           ...+++.+|+.......  
T Consensus        82 idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~  161 (250)
T d1yo6a1          82 LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT  161 (250)
T ss_dssp             CCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC
T ss_pred             eEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCc
Confidence            7999998320              0                 11112221           12578888776443211  


Q ss_pred             -----CCchhccchhHH--HHHHHHHHHHHhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhh
Q 022625          200 -----GGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALE  272 (294)
Q Consensus       200 -----~~~~~~~~~~~~--~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~  272 (294)
                           .+...|..+|..  .+.+.....+...|++++.|.||++......           ....+++++.+..++..+.
T Consensus       162 ~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~-----------~~~~~~~e~~a~~~~~~~~  230 (250)
T d1yo6a1         162 SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG-----------KNAALTVEQSTAELISSFN  230 (250)
T ss_dssp             STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------HHHHHHHHHHHT
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC-----------CCCCCCHHHHHHHHHHHHh
Confidence                 122235444431  2233344445668999999999998732211           1234688999999999887


Q ss_pred             CCC--CCCcEEEE
Q 022625          273 SIP--QTGLIFEV  283 (294)
Q Consensus       273 ~~~--~~g~~~~v  283 (294)
                      ...  ..|+.|+-
T Consensus       231 ~~~~~~sG~f~~~  243 (250)
T d1yo6a1         231 KLDNSHNGRFFMR  243 (250)
T ss_dssp             TCCGGGTTCEEET
T ss_pred             cCCCCCCeEEECC
Confidence            643  45776653

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.51  E-value=5.9e-14  Score=122.99  Aligned_cols=185  Identities=12%  Similarity=-0.029  Sum_probs=104.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCcc--chhhhcCCCcEEeecCCCCHHHH-HHH-----hcCCcEEEEcCC
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR--NAMESFGTYVESMAGDASNKKFL-KTA-----LRGVRSIICPSE  172 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~--~~~~~~~~~v~~v~~D~~d~~~l-~~~-----l~~~d~Vi~~~~  172 (294)
                      ||||||+||||++|+++|+++|+ +|+++.+-..  +.....    +....|..+...+ ...     +..+++|+|.+.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV----DLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH----TSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc----ccchhhhccchHHHHHHhhhhcccchhhhhhhcc
Confidence            89999999999999999999996 6777653221  111111    1122233333332 222     245688888722


Q ss_pred             c--------------------hHHhhhhhcCCCEEEEecccccccCCCCchh----ccc-hhHHHHHHHHHHHH----Hh
Q 022625          173 G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQA----LMK-GNARKLAEQDESML----MA  223 (294)
Q Consensus       173 ~--------------------~~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~----~~~-~~~~~~~~~ae~~l----~~  223 (294)
                      -                    .+.+++...+++.+++.|+...+.+......    ..+ ..+...|..+|.++    .+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~  157 (307)
T d1eq2a_          78 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE  157 (307)
T ss_dssp             CCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccc
Confidence            0                    0344567778865555444443332221100    011 11112233445444    45


Q ss_pred             CCCCEEEEEccceecCCCC-------------------Ccce--eeccCCCCCCCcCHHHHHHHHHHHhhCCCCCCcEEE
Q 022625          224 SGIPYTIIRTGVLQNTPGG-------------------KQGF--QFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFE  282 (294)
Q Consensus       224 ~gl~~tivRPg~l~~~~~~-------------------~~~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~~~g~~~~  282 (294)
                      .+++++++||..++ +|..                   +...  ..+.+.....+++++|++.++..++.++.  ...|+
T Consensus       158 ~~~~~~~~r~~~vy-Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~--~~~~~  234 (307)
T d1eq2a_         158 ANSQIVGFRYFNVY-GPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--SGIFN  234 (307)
T ss_dssp             CSSCEEEEEECEEE-SSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--CEEEE
T ss_pred             cccccccccceeEe-eccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc--ccccc
Confidence            79999999999988 5431                   1111  12344556789999999999999887653  46899


Q ss_pred             EecC-Ccccccc
Q 022625          283 VCEI-SNLCEQL  293 (294)
Q Consensus       283 v~~g-~~~~~ei  293 (294)
                      ++++ ..+++|+
T Consensus       235 ~~~~~~~si~~i  246 (307)
T d1eq2a_         235 LGTGRAESFQAV  246 (307)
T ss_dssp             ESCSCCBCHHHH
T ss_pred             cccccchhHHHH
Confidence            9776 5555543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.1e-13  Score=121.40  Aligned_cols=173  Identities=12%  Similarity=0.100  Sum_probs=117.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh-------cCCCcEEeecCCCCHHHHHHHh-------
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTAL-------  161 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~v~~v~~D~~d~~~l~~~l-------  161 (294)
                      .+.||+++||||+++||++++++|+++|++|+++.|+++++.+.       .+..+..+.+|+.+.+.+....       
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            37899999999999999999999999999999999998875543       2346778889999886665543       


Q ss_pred             cCCcEEEEcCCc-------------h-----------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH
Q 022625          162 RGVRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR  211 (294)
Q Consensus       162 ~~~d~Vi~~~~~-------------~-----------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~  211 (294)
                      ...|+++++++.             +                 +...+++. -.++|++||..+..+......|..+|+-
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~asKaa  169 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFA  169 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHHHHH
Confidence            356888887211             0                 11223433 3799999999887777666677655532


Q ss_pred             --HHHHHHHHHH--HhCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhC
Q 022625          212 --KLAEQDESML--MASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALES  273 (294)
Q Consensus       212 --~~~~~ae~~l--~~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~  273 (294)
                        .+.+.....+  ...+++++.|.||++.....    .....+......++.+++|+.++..+..
T Consensus       170 l~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~----~~~~~~~~~~~~~~~e~~a~~i~~~~~~  231 (269)
T d1xu9a_         170 LDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA----MKAVSGIVHMQAAPKEECALEIIKGGAL  231 (269)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH----HHHSCGGGGGGCBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHH----HHhccCCccccCCCHHHHHHHHHHHhhc
Confidence              1222222222  23578899999998862110    0011122223457899999999987754

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.50  E-value=6.2e-14  Score=120.68  Aligned_cols=178  Identities=12%  Similarity=0.085  Sum_probs=112.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHH-------HHhc--CCcEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLK-------TALR--GVRSII  168 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~-------~~l~--~~d~Vi  168 (294)
                      .+|+|+||||+++||++++++|+++|++|+++.+++.+..    .....+..|..+.+...       +.+.  .+|++|
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lI   76 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAIL   76 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cccceeecccCcHHHHHHHHHHHHHHhCCCCceEEE
Confidence            3799999999999999999999999999999988765422    12234455555443332       2222  369999


Q ss_pred             EcCCch-------------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHH
Q 022625          169 CPSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE  215 (294)
Q Consensus       169 ~~~~~~-------------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~  215 (294)
                      |+++++                               +...+++.  .+||++||..+..+......|..+|+-  .+.+
T Consensus        77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~  154 (236)
T d1dhra_          77 CVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--GLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQ  154 (236)
T ss_dssp             ECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHH
T ss_pred             ECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc--cceeEEccHHHcCCccCCcccHHHHHHHHHHHH
Confidence            984321                               01112332  689999999888776666666554431  1111


Q ss_pred             HHHHHHH--hCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEec
Q 022625          216 QDESMLM--ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCE  285 (294)
Q Consensus       216 ~ae~~l~--~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~  285 (294)
                      .....+.  ..|++++.|.||.+......    ..........+++++++|+.+.++++...  ..|..+.|..
T Consensus       155 ~la~El~~~~~gI~vn~v~PG~v~T~~~~----~~~~~~~~~~~~~pe~va~~~~~l~s~~~~~i~G~~i~v~~  224 (236)
T d1dhra_         155 SLAGKNSGMPSGAAAIAVLPVTLDTPMNR----KSMPEADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVT  224 (236)
T ss_dssp             HHTSTTSSCCTTCEEEEEEESCEECHHHH----HHSTTSCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEE
T ss_pred             HHHHHhccCCCcEEEEEEEeccCcCCcch----hhCccchhhcCCCHHHHHHHHHHHhCCCccCCCCCeEEEEE
Confidence            1111122  25899999999998621100    01111223456789999999999887654  4677776643

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.49  E-value=1.7e-13  Score=119.88  Aligned_cols=191  Identities=12%  Similarity=-0.015  Sum_probs=121.8

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCccch---hhh--cCCCcEEeecCCCCHHHHHHHh-------c
Q 022625           97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNA---MES--FGTYVESMAGDASNKKFLKTAL-------R  162 (294)
Q Consensus        97 ~~~~~vlVtGatG--~IG~~l~~~L~~~g~~V~~~~R~~~~~---~~~--~~~~v~~v~~D~~d~~~l~~~l-------~  162 (294)
                      +.+|++|||||+|  +||.+++++|+++|++|+++.|+++..   .+.  ......++..|+++.+.+.+++       .
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            5789999999987  799999999999999999999986421   111  2245677899999987776665       3


Q ss_pred             CCcEEEEcCCch-------------------------------HHhhhhhcCCCE-EEEecccccccCCCCchhccchhH
Q 022625          163 GVRSIICPSEGF-------------------------------ISNAGSLKGVQH-VILLSQLSVYRGSGGIQALMKGNA  210 (294)
Q Consensus       163 ~~d~Vi~~~~~~-------------------------------~~~~~~~~gv~r-~V~vSs~~~~~~~~~~~~~~~~~~  210 (294)
                      .+|++|++.+..                               ........+..+ ++.+|+.+...+......|..++.
T Consensus        83 ~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~asK~  162 (274)
T d2pd4a1          83 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKA  162 (274)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHH
T ss_pred             CCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhHHHH
Confidence            569999872210                               000112223233 555555555544444444433332


Q ss_pred             --HHHHHHHHHHHHhCCCCEEEEEccceecCCCCC----cce--eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcE
Q 022625          211 --RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK----QGF--QFEEGCAANGSLSKEDAAFICVEALESIP--QTGLI  280 (294)
Q Consensus       211 --~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~----~~~--~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~  280 (294)
                        ..+.+.....+...|++++.|.||.+.......    ...  ..........+..++|+|.++++++.+..  ..|++
T Consensus       163 al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~itG~~  242 (274)
T d2pd4a1         163 ALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEV  242 (274)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCCCcCce
Confidence              122333444456689999999999876322110    000  00111233456799999999999987644  57899


Q ss_pred             EEEecCC
Q 022625          281 FEVCEIS  287 (294)
Q Consensus       281 ~~v~~g~  287 (294)
                      +.+.+|-
T Consensus       243 i~vDGG~  249 (274)
T d2pd4a1         243 HFVDAGY  249 (274)
T ss_dssp             EEESTTG
T ss_pred             EEECCCh
Confidence            9998874

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.49  E-value=2.1e-13  Score=118.22  Aligned_cols=191  Identities=12%  Similarity=0.064  Sum_probs=124.1

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCccchhhh-----cCCCcEEeecCCCCHHHHHHHhc-------
Q 022625           97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG--~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~~~v~~v~~D~~d~~~l~~~l~-------  162 (294)
                      +.+|++|||||++  +||+++++.|+++|++|++..|+++.....     .......+..|+.+..++.+.+.       
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            5789999999998  899999999999999999999986532221     12356778889999877666553       


Q ss_pred             CCcEEEEcCC---c--h--------------------------HHhhhh--hcCCCEEEEecccccccCCCCchhccchh
Q 022625          163 GVRSIICPSE---G--F--------------------------ISNAGS--LKGVQHVILLSQLSVYRGSGGIQALMKGN  209 (294)
Q Consensus       163 ~~d~Vi~~~~---~--~--------------------------~~~~~~--~~gv~r~V~vSs~~~~~~~~~~~~~~~~~  209 (294)
                      ..|++||+..   .  .                          +...+.  ..+-+.+|++||..+..+.+....|..+|
T Consensus        83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~sK  162 (258)
T d1qsga_          83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAK  162 (258)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred             ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHHHH
Confidence            3389998721   0  0                          000111  12234688999887766555445554444


Q ss_pred             H--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcce------eeccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCc
Q 022625          210 A--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGF------QFEEGCAANGSLSKEDAAFICVEALESIP--QTGL  279 (294)
Q Consensus       210 ~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~------~~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~  279 (294)
                      .  ..+.+.....+..+|++++.|+||++..........      .+.......-+..+||+|.++++++.+..  ..|+
T Consensus       163 aal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~~itG~  242 (258)
T d1qsga_         163 ASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGE  242 (258)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCccCc
Confidence            3  223344445556689999999999986322111000      00001112336789999999999986543  5789


Q ss_pred             EEEEecCC
Q 022625          280 IFEVCEIS  287 (294)
Q Consensus       280 ~~~v~~g~  287 (294)
                      ++.+.+|-
T Consensus       243 ~i~vDGG~  250 (258)
T d1qsga_         243 VVHVDGGF  250 (258)
T ss_dssp             EEEESTTG
T ss_pred             eEEECcCH
Confidence            99998773

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=4.9e-13  Score=117.40  Aligned_cols=72  Identities=17%  Similarity=0.176  Sum_probs=60.0

Q ss_pred             CCeE-EEEcCCChHHHHHHHHHHHC-CCeEEEEEcCccchhhh------cCCCcEEeecCCCCHHHHHHHhc-------C
Q 022625           99 RDAV-LVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G  163 (294)
Q Consensus        99 ~~~v-lVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~~~~~~~------~~~~v~~v~~D~~d~~~l~~~l~-------~  163 (294)
                      ||+| +||||+++||++++++|+++ |++|++.+|+++++.+.      ....++++.+|++|.++++++++       .
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            5665 89999999999999999986 89999999999875432      23478899999999988876653       5


Q ss_pred             CcEEEEc
Q 022625          164 VRSIICP  170 (294)
Q Consensus       164 ~d~Vi~~  170 (294)
                      +|++||+
T Consensus        82 iDiLVnN   88 (275)
T d1wmaa1          82 LDVLVNN   88 (275)
T ss_dssp             EEEEEEC
T ss_pred             cEEEEEc
Confidence            6999998

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.44  E-value=2.8e-13  Score=116.30  Aligned_cols=177  Identities=8%  Similarity=0.058  Sum_probs=111.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHH-------HHh--cCCcEEEE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLK-------TAL--RGVRSIIC  169 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~-------~~l--~~~d~Vi~  169 (294)
                      ..+|+||||+++||++++++|+++|++|++++|+++...    .....+.+|..+.+...       ..+  ..+|++||
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~lin   77 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC   77 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEE
Confidence            457899999999999999999999999999999876432    12334556665543322       222  23699999


Q ss_pred             cCCch-------------------------------HHhhhhhcCCCEEEEecccccccCCCCchhccchhHH--HHHHH
Q 022625          170 PSEGF-------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ  216 (294)
Q Consensus       170 ~~~~~-------------------------------~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~--~~~~~  216 (294)
                      +++.+                               +...+++.  .++|++||..+..+......|..+|.-  .+.+.
T Consensus        78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~  155 (235)
T d1ooea_          78 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSS  155 (235)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             CCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc--eEEEEeccHHhcCCcccccchHHHHHHHHHHHHH
Confidence            83310                               01112222  689999999888777776677554431  11111


Q ss_pred             HHHHHH--hCCCCEEEEEccceecCCCCCcceeeccCCCCCCCcCHHHHHHHHHHHhhCCC---CCCcEEEEec
Q 022625          217 DESMLM--ASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIP---QTGLIFEVCE  285 (294)
Q Consensus       217 ae~~l~--~~gl~~tivRPg~l~~~~~~~~~~~~~~g~~~~~~Is~eDvA~~iv~aL~~~~---~~g~~~~v~~  285 (294)
                      ....+.  ..+++++.|.||++.....    ...........+++++|+++.++..+..+.   ..|..+.|..
T Consensus       156 la~e~~~~~~~i~v~~i~Pg~~~T~~~----~~~~~~~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i~v~~  225 (235)
T d1ooea_         156 LAAKDSGLPDNSAVLTIMPVTLDTPMN----RKWMPNADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITT  225 (235)
T ss_dssp             HHSTTSSCCTTCEEEEEEESCBCCHHH----HHHSTTCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEE
T ss_pred             HHHHhccCCCceEEEEEecCcCcCcch----hhhCcCCccccCCCHHHHHHHHHHHhcCccccCCCceEEEEEe
Confidence            111111  2477889999998762110    001112233457899999999987675543   4688888744

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.41  E-value=1.2e-12  Score=114.72  Aligned_cols=189  Identities=10%  Similarity=-0.044  Sum_probs=118.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhh-------hcCCCc-----------------EEeecCCCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME-------SFGTYV-----------------ESMAGDASN  153 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~-------~~~~~v-----------------~~v~~D~~d  153 (294)
                      +..++||||+++||++++++|+++|++|++..|+.++ +..       ..+...                 ....+|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            4678999999999999999999999999998776533 111       112222                 234567888


Q ss_pred             HHHHHHHh-------cCCcEEEEcCCc-------------h----------------HHh--------------------
Q 022625          154 KKFLKTAL-------RGVRSIICPSEG-------------F----------------ISN--------------------  177 (294)
Q Consensus       154 ~~~l~~~l-------~~~d~Vi~~~~~-------------~----------------~~~--------------------  177 (294)
                      .+++++++       ..+|++||+++.             +                +..                    
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            88877765       367999997221             0                000                    


Q ss_pred             -hhhhcCCCEEEEecccccccCCCCchhccchhH--HHHHHHHHHHHHhCCCCEEEEEccceec--CCCCCcceeeccCC
Q 022625          178 -AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQN--TPGGKQGFQFEEGC  252 (294)
Q Consensus       178 -~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~--~~~~~~~~~~~~g~  252 (294)
                       ...+.+..++|++++.....+..+...|..+|.  ..+.+.....+...|++++.|.||+...  .........+....
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~~~~~~~~~~~  241 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRSKV  241 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCHHHHHHHHTTC
T ss_pred             HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCCHHHHHHHHhcC
Confidence             012233457888888877666655556655543  2233444455667899999999997331  11100000011111


Q ss_pred             CC-CCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          253 AA-NGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       253 ~~-~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      .. .-+..++|+|+++++++.+..  ..|+++.|.+|-
T Consensus       242 pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~  279 (284)
T d1e7wa_         242 PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY  279 (284)
T ss_dssp             TTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcCh
Confidence            11 335689999999999887544  578999998874

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.40  E-value=1.4e-12  Score=113.40  Aligned_cols=193  Identities=10%  Similarity=0.061  Sum_probs=119.0

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCccchhh----hcCCCcEEeecCCCCHHHHHHHhc--------
Q 022625           97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALR--------  162 (294)
Q Consensus        97 ~~~~~vlVtGatG--~IG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~~~~v~~v~~D~~d~~~l~~~l~--------  162 (294)
                      +.+|+++||||+|  +||++++++|+++|++|++..|+.++..+    ..+.....+++|+++.+++.++++        
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            5789999999754  69999999999999999999998876432    234567788999999866554432        


Q ss_pred             --CCcEEEEcCC-----c-----h---------------------HHhhh-hhcCCCEEEEecccccccCCCCchhccch
Q 022625          163 --GVRSIICPSE-----G-----F---------------------ISNAG-SLKGVQHVILLSQLSVYRGSGGIQALMKG  208 (294)
Q Consensus       163 --~~d~Vi~~~~-----~-----~---------------------~~~~~-~~~gv~r~V~vSs~~~~~~~~~~~~~~~~  208 (294)
                        ..|+++|+.+     .     +                     ..... ...+...++++++............|..+
T Consensus        84 ~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~~~y~~s  163 (268)
T d2h7ma1          84 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVA  163 (268)
T ss_dssp             TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTTHHHHHH
T ss_pred             CCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcccchhhcc
Confidence              3488888721     0     0                     00001 11122344455444444443334444333


Q ss_pred             hH--HHHHHHHHHHHHhCCCCEEEEEccceecC--------CCCCccee--------eccCCC-CCCCcCHHHHHHHHHH
Q 022625          209 NA--RKLAEQDESMLMASGIPYTIIRTGVLQNT--------PGGKQGFQ--------FEEGCA-ANGSLSKEDAAFICVE  269 (294)
Q Consensus       209 ~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~--------~~~~~~~~--------~~~g~~-~~~~Is~eDvA~~iv~  269 (294)
                      +.  ..+.+.....+...|++++.|.||.+...        ........        +..... ...+..++|+|+++++
T Consensus       164 K~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~f  243 (268)
T d2h7ma1         164 KSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCA  243 (268)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHH
T ss_pred             ccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence            32  22334444555668999999999987521        11100000        000011 1235679999999999


Q ss_pred             HhhCCC--CCCcEEEEecCCcc
Q 022625          270 ALESIP--QTGLIFEVCEISNL  289 (294)
Q Consensus       270 aL~~~~--~~g~~~~v~~g~~~  289 (294)
                      ++.+..  ..|+++.|.+|-.+
T Consensus       244 L~Sd~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         244 LLSDWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             HHSSSCTTCCSEEEEESTTGGG
T ss_pred             HhCchhcCccCCEEEECcCccc
Confidence            886543  47899999888643

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.36  E-value=7.2e-12  Score=108.47  Aligned_cols=188  Identities=14%  Similarity=0.077  Sum_probs=116.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh--------cCCCcEEeecCCCC----HHHHHH-------H
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASN----KKFLKT-------A  160 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~v~~v~~D~~d----~~~l~~-------~  160 (294)
                      .++|||||+++||++++++|+++|++|++..|+.++..+.        .+.....+..|+.+    .+.+.+       .
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999987653221        22345555555543    333333       3


Q ss_pred             hcCCcEEEEcCCc-----h---------------------H-----------Hhh---------hhhcCCCEEEEecccc
Q 022625          161 LRGVRSIICPSEG-----F---------------------I-----------SNA---------GSLKGVQHVILLSQLS  194 (294)
Q Consensus       161 l~~~d~Vi~~~~~-----~---------------------~-----------~~~---------~~~~gv~r~V~vSs~~  194 (294)
                      +..+|++||+.+.     +                     +           ...         ........++.+|+..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            3467999997220     0                     0           000         0112334677777777


Q ss_pred             cccCCCCchhccchhH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCCCcc--eeeccCCCC-CCCcCHHHHHHHHHH
Q 022625          195 VYRGSGGIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQG--FQFEEGCAA-NGSLSKEDAAFICVE  269 (294)
Q Consensus       195 ~~~~~~~~~~~~~~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~~~~--~~~~~g~~~-~~~Is~eDvA~~iv~  269 (294)
                      ...+......|..+|.  ..+.+.....+...|++++.|.||++.........  ..+...... ..+.++||+|.++++
T Consensus       162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~pl~r~~~~peeva~~v~f  241 (266)
T d1mxha_         162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQSEASAAQIADAIAF  241 (266)
T ss_dssp             GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTTCTTTSCCBCHHHHHHHHHH
T ss_pred             ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence            6665555556654443  22334444556668999999999987522111100  011111111 223589999999999


Q ss_pred             HhhCCC--CCCcEEEEecCC
Q 022625          270 ALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       270 aL~~~~--~~g~~~~v~~g~  287 (294)
                      ++.+..  ..|+++.|.+|-
T Consensus       242 L~s~~s~~itG~~i~vDGG~  261 (266)
T d1mxha_         242 LVSKDAGYITGTTLKVDGGL  261 (266)
T ss_dssp             HHSGGGTTCCSCEEEESTTG
T ss_pred             HhCchhCCccCCeEEECccH
Confidence            997654  478999998773

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.23  E-value=1.4e-10  Score=99.64  Aligned_cols=178  Identities=12%  Similarity=0.097  Sum_probs=100.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHh--------cCCcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--------RGVRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l--------~~~d~Vi~~  170 (294)
                      ||.|+||||+++||++++++|+++|++|++++|+.++.           ..|+.+....+...        ...|+++++
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~-----------~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~   69 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------IADLSTAEGRKQAIADVLAKCSKGMDGLVLC   69 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-----------ECCTTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH-----------HHHhcCHHHHHHHHHHHHHHhCCCCcEEEEc
Confidence            68899999999999999999999999999999876432           34666665444322        246999987


Q ss_pred             CC-----ch------------------HHhhhhhcCCCEEEEeccccccc---------------------------C-C
Q 022625          171 SE-----GF------------------ISNAGSLKGVQHVILLSQLSVYR---------------------------G-S  199 (294)
Q Consensus       171 ~~-----~~------------------~~~~~~~~gv~r~V~vSs~~~~~---------------------------~-~  199 (294)
                      .+     ..                  ..+...+..-.....+++.....                           . .
T Consensus        70 Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~  149 (257)
T d1fjha_          70 AGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ  149 (257)
T ss_dssp             CCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTT
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCC
Confidence            21     00                  01112223334444444332111                           0 0


Q ss_pred             CCchhccchhH--HHHHHHHHHHHHhCCCCEEEEEccceecCCCC-----Cc-ceeeccCC-CCCCCcCHHHHHHHHHHH
Q 022625          200 GGIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQNTPGG-----KQ-GFQFEEGC-AANGSLSKEDAAFICVEA  270 (294)
Q Consensus       200 ~~~~~~~~~~~--~~~~~~ae~~l~~~gl~~tivRPg~l~~~~~~-----~~-~~~~~~g~-~~~~~Is~eDvA~~iv~a  270 (294)
                      .....|..+|.  ..+.+.....+...||+++.|.||++......     .. ...+.... ...-+.+++|+|.+++++
T Consensus       150 ~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~p~eva~~v~fL  229 (257)
T d1fjha_         150 GGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFL  229 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHHH
T ss_pred             cchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            01112322221  11223333445568999999999987522110     00 00111111 223355789999999998


Q ss_pred             hhCCC--CCCcEEEEecCC
Q 022625          271 LESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       271 L~~~~--~~g~~~~v~~g~  287 (294)
                      +....  ..|+.+.+.+|-
T Consensus       230 ~S~~s~~itG~~i~vDGG~  248 (257)
T d1fjha_         230 MSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             TSGGGTTCCSCEEEESTTH
T ss_pred             hCchhCCccCceEEeCCCc
Confidence            86544  579999998773

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.16  E-value=2.2e-11  Score=101.18  Aligned_cols=79  Identities=11%  Similarity=0.081  Sum_probs=68.4

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-----CCcEEeecCCCCHHHHHHHhcCCcEEE
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALRGVRSII  168 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----~~v~~v~~D~~d~~~l~~~l~~~d~Vi  168 (294)
                      ..++.+|+|+||||+|+||+.++++|+++|++|+++.|+.+++.+...     ..+.+..+|++|.+.+++++.++|+||
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDili   97 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF   97 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeee
Confidence            356789999999999999999999999999999999999887554321     256778899999999999999999999


Q ss_pred             EcCC
Q 022625          169 CPSE  172 (294)
Q Consensus       169 ~~~~  172 (294)
                      |+++
T Consensus        98 n~Ag  101 (191)
T d1luaa1          98 TAGA  101 (191)
T ss_dssp             ECCC
T ss_pred             ecCc
Confidence            9843

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.11  E-value=3.1e-10  Score=99.67  Aligned_cols=193  Identities=11%  Similarity=0.024  Sum_probs=107.5

Q ss_pred             CcCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEEcCccchh-------------hhcC--C-----CcEEeec---
Q 022625           95 PEEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAM-------------ESFG--T-----YVESMAG---  149 (294)
Q Consensus        95 ~~~~~~~vlVtGatG--~IG~~l~~~L~~~g~~V~~~~R~~~~~~-------------~~~~--~-----~v~~v~~---  149 (294)
                      .++.+|++|||||+|  +||++++++|+++|++|++..|++....             ....  .     .+..+..   
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            456899999999987  8999999999999999999988653100             0000  0     1111111   


Q ss_pred             ------------------CCCCHH----HHHHHhcCCcEEEEcCCc-------h---------------------HHhhh
Q 022625          150 ------------------DASNKK----FLKTALRGVRSIICPSEG-------F---------------------ISNAG  179 (294)
Q Consensus       150 ------------------D~~d~~----~l~~~l~~~d~Vi~~~~~-------~---------------------~~~~~  179 (294)
                                        |..+.+    .+.+.+..+|++||+.+.       +                     +...+
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                              222222    233344578999997221       1                     00011


Q ss_pred             hh--cCCCEEEEecccccccC-CCCchhccchhH--HHHHH-HHHHHHHhCCCCEEEEEccceecCCCCCcce------e
Q 022625          180 SL--KGVQHVILLSQLSVYRG-SGGIQALMKGNA--RKLAE-QDESMLMASGIPYTIIRTGVLQNTPGGKQGF------Q  247 (294)
Q Consensus       180 ~~--~gv~r~V~vSs~~~~~~-~~~~~~~~~~~~--~~~~~-~ae~~l~~~gl~~tivRPg~l~~~~~~~~~~------~  247 (294)
                      ..  ..-.+++.+++...... ......|...+.  ..+.+ .+.++....|++++.|.||++..........      .
T Consensus       164 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~  243 (297)
T d1d7oa_         164 LPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEY  243 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHH
T ss_pred             HHHhhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHH
Confidence            11  11134555655544332 233334433332  11222 2333334579999999999986322211100      0


Q ss_pred             eccCCCCCCCcCHHHHHHHHHHHhhCCC--CCCcEEEEecCC
Q 022625          248 FEEGCAANGSLSKEDAAFICVEALESIP--QTGLIFEVCEIS  287 (294)
Q Consensus       248 ~~~g~~~~~~Is~eDvA~~iv~aL~~~~--~~g~~~~v~~g~  287 (294)
                      +........+..++|||.++++++....  ..|+++.+.+|-
T Consensus       244 ~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         244 SYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             HHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence            0011122345689999999999886543  578999998874

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.85  E-value=5.9e-09  Score=93.19  Aligned_cols=36  Identities=11%  Similarity=0.086  Sum_probs=31.6

Q ss_pred             CCeEEEEc--CCChHHHHHHHHHHHCCCeEEEEEcCcc
Q 022625           99 RDAVLVTD--GDSDIGQMVILSLIVKRTRIKALVKDKR  134 (294)
Q Consensus        99 ~~~vlVtG--atG~IG~~l~~~L~~~g~~V~~~~R~~~  134 (294)
                      +|.+||||  ++.+||+.++++|+++|++|++..++..
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~   39 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPV   39 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchh
Confidence            68999999  4569999999999999999999877653

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.68  E-value=4.4e-08  Score=75.75  Aligned_cols=90  Identities=18%  Similarity=0.123  Sum_probs=72.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCCCCHHHHHHH-hcCCcEEEEcCCch---
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF---  174 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~~~---  174 (294)
                      |+|+|.|+ |.+|+.+++.|.++|++|+++.+++++...... -++.++.+|.+|++.++++ ++.+|+++.++...   
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~~N   79 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN   79 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcHHHH
Confidence            78999998 999999999999999999999999987655432 2688999999999999887 68889999884432   


Q ss_pred             --HHhhhhhcCCCEEEEe
Q 022625          175 --ISNAGSLKGVQHVILL  190 (294)
Q Consensus       175 --~~~~~~~~gv~r~V~v  190 (294)
                        ....++..+++++|-.
T Consensus        80 ~~~~~~~k~~~~~~iI~~   97 (132)
T d1lssa_          80 LMSSLLAKSYGINKTIAR   97 (132)
T ss_dssp             HHHHHHHHHTTCCCEEEE
T ss_pred             HHHHHHHHHcCCceEEEE
Confidence              3334567788877643

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.50  E-value=3.2e-07  Score=70.60  Aligned_cols=91  Identities=9%  Similarity=0.047  Sum_probs=72.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH-hcCCcEEEEcCCch----
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF----  174 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~~~----  174 (294)
                      |+++|.|+ |.+|+.+++.|.++|++|+++..+++...+........+.+|.++++.+.++ ++.+|++|.+.+..    
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~~~~   79 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQAS   79 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCchHHhH
Confidence            57899987 9999999999999999999999999988776666778899999999999877 78899998874321    


Q ss_pred             --HHhhhhhcCCCEEEEec
Q 022625          175 --ISNAGSLKGVQHVILLS  191 (294)
Q Consensus       175 --~~~~~~~~gv~r~V~vS  191 (294)
                        ....++..+..+++--.
T Consensus        80 ~~~~~~~~~~~~~~iiar~   98 (134)
T d2hmva1          80 TLTTLLLKELDIPNIWVKA   98 (134)
T ss_dssp             HHHHHHHHHTTCSEEEEEC
T ss_pred             HHHHHHHHHcCCCcEEeec
Confidence              22234556777766444

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.16  E-value=4e-06  Score=66.59  Aligned_cols=73  Identities=10%  Similarity=0.063  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--CCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      .|+|+|.|| |.+|+.+++.|.++|++|+++.|+.+++.+...  ........+..+.......+...|.++.+.+
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~   76 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP   76 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeecc
Confidence            689999997 999999999999999999999999998776543  2344455677777888888889999988744

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.94  E-value=3.6e-06  Score=67.24  Aligned_cols=40  Identities=18%  Similarity=0.194  Sum_probs=36.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES  139 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~  139 (294)
                      |||.|+||+|.+|+.+++.|++.|++|++..|+++++.+.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAK   40 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            6899999999999999999999999999999999875443

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.93  E-value=1.2e-05  Score=64.46  Aligned_cols=96  Identities=10%  Similarity=0.067  Sum_probs=63.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCchHH
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFIS  176 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~~~  176 (294)
                      .++++|+|+||+|.+|...++.+...|.+|+++++++++......-+.+.+ .|..+........+++|+||.+.+..+.
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~g~D~v~d~~G~~~~  104 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEA-ATYAEVPERAKAWGGLDLVLEVRGKEVE  104 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEE-EEGGGHHHHHHHTTSEEEEEECSCTTHH
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccccccccccccccccccccccccee-eehhhhhhhhhccccccccccccchhHH
Confidence            368999999999999999999998999999999998876554333233322 2455543334456789999998554443


Q ss_pred             hhhhhcC-CCEEEEeccc
Q 022625          177 NAGSLKG-VQHVILLSQL  193 (294)
Q Consensus       177 ~~~~~~g-v~r~V~vSs~  193 (294)
                      ++..... -.++|+++..
T Consensus       105 ~~~~~l~~~G~~v~~G~~  122 (171)
T d1iz0a2         105 ESLGLLAHGGRLVYIGAA  122 (171)
T ss_dssp             HHHTTEEEEEEEEEC---
T ss_pred             HHHHHHhcCCcEEEEeCC
Confidence            3322111 2478887643

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.81  E-value=0.00013  Score=56.83  Aligned_cols=72  Identities=21%  Similarity=0.338  Sum_probs=60.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc----hhhhcCCCcEEeecCCCCHHHHHHH-hcCCcEEEEcCC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~----~~~~~~~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~  172 (294)
                      ..|+|.|. |.+|+.++++|.++|++|+++..++++    .......++.++.||.+|++.++++ ++.++++|.+++
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~   80 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence            36899998 899999999999999999999998864    3333456899999999999998765 678899998854

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.71  E-value=9.6e-05  Score=57.59  Aligned_cols=92  Identities=15%  Similarity=0.028  Sum_probs=53.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC----CeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCch
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF  174 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~  174 (294)
                      ||+|.|.||||.+|+++++.|+++.    .+++++.++...........-.....++.+.    ..+.++|++|.+.+.-
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~----~~~~~~DivF~a~~~~   76 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDL----EALKALDIIVTCQGGD   76 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCH----HHHHTCSEEEECSCHH
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccch----hhhhcCcEEEEecCch
Confidence            5799999999999999999888763    3666666554322111100111122233343    2468899999995432


Q ss_pred             ----HHhhhhhcCCC-EEEEecccc
Q 022625          175 ----ISNAGSLKGVQ-HVILLSQLS  194 (294)
Q Consensus       175 ----~~~~~~~~gv~-r~V~vSs~~  194 (294)
                          +...+.+.|.+ .+|=.||..
T Consensus        77 ~s~~~~~~~~~~g~~~~VID~Ss~f  101 (146)
T d1t4ba1          77 YTNEIYPKLRESGWQGYWIDAASSL  101 (146)
T ss_dssp             HHHHHHHHHHHTTCCCEEEECSSTT
T ss_pred             HHHHhhHHHHhcCCCeecccCCccc
Confidence                34445566764 333344443

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.69  E-value=6.4e-05  Score=59.81  Aligned_cols=73  Identities=14%  Similarity=0.014  Sum_probs=51.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--------CCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--------TYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--------~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      .|+|.|.|| |.+|..++..|.++|++|.++.|++++......        +..+...........+.+.++++|+||.+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~   79 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV   79 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence            489999998 999999999999999999999999876543221        11111111111112356789999999998


Q ss_pred             CC
Q 022625          171 SE  172 (294)
Q Consensus       171 ~~  172 (294)
                      ..
T Consensus        80 v~   81 (184)
T d1bg6a2          80 VP   81 (184)
T ss_dssp             SC
T ss_pred             Ec
Confidence            43

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.66  E-value=4e-05  Score=61.66  Aligned_cols=98  Identities=11%  Similarity=0.036  Sum_probs=65.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcE--EeecCCCCHHHHHHHh--cCCcEEEEcCC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVE--SMAGDASNKKFLKTAL--RGVRSIICPSE  172 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~--~v~~D~~d~~~l~~~l--~~~d~Vi~~~~  172 (294)
                      .++.+|+|+||+|.+|...++-....|++|+++++++++.......+..  +..-|-...+.+.+..  +++|+||.+.+
T Consensus        28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG  107 (182)
T d1v3va2          28 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG  107 (182)
T ss_dssp             CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecC
Confidence            3689999999999999999999999999999999998775443322222  2223333344444443  46899999965


Q ss_pred             chHH-h---hhhhcCCCEEEEecccccc
Q 022625          173 GFIS-N---AGSLKGVQHVILLSQLSVY  196 (294)
Q Consensus       173 ~~~~-~---~~~~~gv~r~V~vSs~~~~  196 (294)
                      +-.. .   +++..  .+++.+.....+
T Consensus       108 ~~~~~~~~~~l~~~--G~~v~~G~~~~~  133 (182)
T d1v3va2         108 GEFLNTVLSQMKDF--GKIAICGAISVY  133 (182)
T ss_dssp             HHHHHHHGGGEEEE--EEEEECCCGGGT
T ss_pred             chhhhhhhhhccCC--CeEEeecceeec
Confidence            4322 2   22222  478877655443

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.59  E-value=7.4e-05  Score=59.70  Aligned_cols=95  Identities=16%  Similarity=0.109  Sum_probs=64.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHh--cCCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l--~~~d~Vi~~~~  172 (294)
                      ++.+|||+||+|.+|...++.+...|.+|+++++++++.......+.+.+ .|..+.   +.+.+..  +++|++|.+.+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~d~~g  103 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYV-GDSRSVDFADEILELTDGYGVDVVLNSLA  103 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccccccccccccc-ccCCccCHHHHHHHHhCCCCEEEEEeccc
Confidence            57899999999999999999998899999999998876554433333332 233343   4444444  46899999955


Q ss_pred             chHHh----hhhhcCCCEEEEeccccc
Q 022625          173 GFISN----AGSLKGVQHVILLSQLSV  195 (294)
Q Consensus       173 ~~~~~----~~~~~gv~r~V~vSs~~~  195 (294)
                      +-..+    +++..  .++|.++....
T Consensus       104 ~~~~~~~~~~l~~~--G~~v~~G~~~~  128 (183)
T d1pqwa_         104 GEAIQRGVQILAPG--GRFIELGKKDV  128 (183)
T ss_dssp             THHHHHHHHTEEEE--EEEEECSCGGG
T ss_pred             chHHHHHHHHhcCC--CEEEEEccCCC
Confidence            43222    22222  57888864433

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=7e-05  Score=59.63  Aligned_cols=92  Identities=14%  Similarity=0.082  Sum_probs=61.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHh--cCCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l--~~~d~Vi~~~~  172 (294)
                      ++.+|||+||+|.+|...++.+...|++|+++++++++......-+.+.+ .|..+.   +.+.+..  +++|+||.+.+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~d~~g  106 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEV-FNHREVNYIDKIKKYVGEKGIDIIIEMLA  106 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccccccCcccc-cccccccHHHHhhhhhccCCceEEeeccc
Confidence            57899999999999999999999999999999998876543322223222 255544   3334443  35799999855


Q ss_pred             chHHh----hhhhcCCCEEEEecc
Q 022625          173 GFISN----AGSLKGVQHVILLSQ  192 (294)
Q Consensus       173 ~~~~~----~~~~~gv~r~V~vSs  192 (294)
                      +...+    .++..  .++|.++.
T Consensus       107 ~~~~~~~~~~l~~~--G~iv~~G~  128 (174)
T d1yb5a2         107 NVNLSKDLSLLSHG--GRVIVVGS  128 (174)
T ss_dssp             HHHHHHHHHHEEEE--EEEEECCC
T ss_pred             HHHHHHHHhccCCC--CEEEEEec
Confidence            43222    22222  57888864

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.53  E-value=5.6e-05  Score=60.30  Aligned_cols=95  Identities=9%  Similarity=0.014  Sum_probs=63.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH---HHHHHHhc--CCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~---~~l~~~l~--~~d~Vi~~~~  172 (294)
                      ++.+|+|+||+|.+|...++-+...|.+|++.++++++.+....-+.+.+ .|..+.   +.+.+.-.  ++|+|+.+.+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~v-i~~~~~d~~~~v~~~t~g~g~d~v~d~~g  106 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQV-INYREEDLVERLKEITGGKKVRVVYDSVG  106 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEE-EECCCCCHHHHHHHHhCCCCeEEEEeCcc
Confidence            57899999999999999999999999999999999987554332223322 245443   34444433  5699999854


Q ss_pred             ch-HHh---hhhhcCCCEEEEeccccc
Q 022625          173 GF-ISN---AGSLKGVQHVILLSQLSV  195 (294)
Q Consensus       173 ~~-~~~---~~~~~gv~r~V~vSs~~~  195 (294)
                      +. +..   .++..  .+++.++....
T Consensus       107 ~~~~~~~~~~l~~~--G~~v~~g~~~~  131 (179)
T d1qora2         107 RDTWERSLDCLQRR--GLMVSFGNSSG  131 (179)
T ss_dssp             GGGHHHHHHTEEEE--EEEEECCCTTC
T ss_pred             HHHHHHHHHHHhcC--CeeeecccccC
Confidence            43 222   22233  36777765544

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.48  E-value=0.00015  Score=54.76  Aligned_cols=70  Identities=20%  Similarity=0.269  Sum_probs=58.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH-hcCCcEEEEcCC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-l~~~d~Vi~~~~  172 (294)
                      |.++|.|. |.+|+++++.|  ++++|+++..+++........++.++.+|.++++.++++ ++.+++++.+.+
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~   71 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLE   71 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEecc
Confidence            45889997 88999999998  467888889888876665556899999999999988775 578899998854

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.48  E-value=0.00011  Score=59.08  Aligned_cols=100  Identities=13%  Similarity=0.012  Sum_probs=62.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCH-HHHHHHh--cCCcEEEEcCCc-
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTAL--RGVRSIICPSEG-  173 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~-~~l~~~l--~~~d~Vi~~~~~-  173 (294)
                      .+.+|||+||+|++|...++-+...|.+|++.++++++......-+.+.+. |..+. +...+..  +++|+||.+.++ 
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi-~~~~~~~~~~~~~~~~gvD~vid~vgg~  109 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVL-AREDVMAERIRPLDKQRWAAAVDPVGGR  109 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEE-ECC---------CCSCCEEEEEECSTTT
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccceee-ecchhHHHHHHHhhccCcCEEEEcCCch
Confidence            478999999999999999988889999999999998875543322222221 33221 1122222  368999998443 


Q ss_pred             hHHhhhhhc-CCCEEEEecccccccC
Q 022625          174 FISNAGSLK-GVQHVILLSQLSVYRG  198 (294)
Q Consensus       174 ~~~~~~~~~-gv~r~V~vSs~~~~~~  198 (294)
                      .+....... .-.|+|.++.......
T Consensus       110 ~~~~~l~~l~~~Griv~~G~~~g~~~  135 (176)
T d1xa0a2         110 TLATVLSRMRYGGAVAVSGLTGGAEV  135 (176)
T ss_dssp             THHHHHHTEEEEEEEEECSCCSSSCC
T ss_pred             hHHHHHHHhCCCceEEEeecccCccc
Confidence            333322211 1258998887655443

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.48  E-value=0.00027  Score=50.38  Aligned_cols=84  Identities=11%  Similarity=0.108  Sum_probs=57.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc-hhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC--
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--  172 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~--  172 (294)
                      +..+|+|+|.|. |..|..+++.|.++|++|++.+.+... ..+.......+..+... .    ..+.++|.||...+  
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~d~vi~SPGi~   75 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLN-D----EWLMAADLIVASPGIA   75 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBCC-H----HHHHHCSEEEECTTSC
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeecccc-h----hhhccCCEEEECCCCC
Confidence            356899999998 899999999999999999999886543 22233344555544432 2    33567899998722  


Q ss_pred             --chHHhhhhhcCCC
Q 022625          173 --GFISNAGSLKGVQ  185 (294)
Q Consensus       173 --~~~~~~~~~~gv~  185 (294)
                        .-....+++.|++
T Consensus        76 ~~~~~~~~a~~~gi~   90 (93)
T d2jfga1          76 LAHPSLSAAADAGIE   90 (93)
T ss_dssp             TTSHHHHHHHHTTCE
T ss_pred             CCCHHHHHHHHcCCC
Confidence              2345556666654

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.45  E-value=0.00022  Score=57.26  Aligned_cols=75  Identities=8%  Similarity=0.050  Sum_probs=60.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhh------cC--CCcEEeecCCCCHHHHHHHhcCCcE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES------FG--TYVESMAGDASNKKFLKTALRGVRS  166 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~------~~--~~v~~v~~D~~d~~~l~~~l~~~d~  166 (294)
                      ...+++|+|.|+ |+.|+.++..|...|. +++++.|++++..+.      +.  ........|+.+.+.+.+.+..+|+
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence            456799999998 8999999999999997 788889987754322      11  1344557789999999999999999


Q ss_pred             EEEcC
Q 022625          167 IICPS  171 (294)
Q Consensus       167 Vi~~~  171 (294)
                      ||+++
T Consensus        94 iIN~T   98 (182)
T d1vi2a1          94 LTNGT   98 (182)
T ss_dssp             EEECS
T ss_pred             ecccc
Confidence            99993

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.44  E-value=7.6e-05  Score=58.98  Aligned_cols=70  Identities=17%  Similarity=0.149  Sum_probs=54.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCC-CcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      .+.+++|+|.|+ |.+|+.+++.|..+|. ++.+..|+.+++.+.... +.+.     .+.+.+.+.+..+|+||.++
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~-----~~~~~~~~~l~~~Divi~at   92 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA-----VRFDELVDHLARSDVVVSAT   92 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE-----CCGGGHHHHHHTCSEEEECC
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc-----ccchhHHHHhccCCEEEEec
Confidence            456899999998 9999999999999998 688899998876554321 2332     23346677899999999993

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.42  E-value=1.8e-05  Score=62.25  Aligned_cols=68  Identities=9%  Similarity=0.065  Sum_probs=47.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--C-C-CcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--G-T-YVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~-~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      |+|+|.|+ |.+|..++..|++.|++|.++.|++++.....  . . ..........+.    +.+..+|+||.+..
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~D~iii~vk   72 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDP----DFLATSDLLLVTLK   72 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCH----HHHHTCSEEEECSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchh----hhhcccceEEEeec
Confidence            78999998 99999999999999999999999987644321  1 1 111111111222    34568999999844

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.42  E-value=0.00055  Score=53.16  Aligned_cols=93  Identities=15%  Similarity=0.142  Sum_probs=54.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC----CeEEEEEcCccchhhh-cCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc-
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g----~~V~~~~R~~~~~~~~-~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-  173 (294)
                      |+|.|.||||++|+++++.|+++.    .++..+..+....... +... .....+..+.    ..++++|+||.+.+. 
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~-~~~~~~~~~~----~~~~~~DvvF~alp~~   75 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKD-AGMLHDAFDI----ESLKQLDAVITCQGGS   75 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSC-CCBCEETTCH----HHHTTCSEEEECSCHH
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCc-ceeeecccch----hhhccccEEEEecCch
Confidence            689999999999999999998753    3555554432211111 1111 1111122332    346889999999543 


Q ss_pred             h---HHhhhhhcCCC-EEEEeccccccc
Q 022625          174 F---ISNAGSLKGVQ-HVILLSQLSVYR  197 (294)
Q Consensus       174 ~---~~~~~~~~gv~-r~V~vSs~~~~~  197 (294)
                      .   +.....+.|.+ .+|=.|+..-..
T Consensus        76 ~s~~~~~~l~~~g~~~~VIDlSsdfR~~  103 (147)
T d1mb4a1          76 YTEKVYPALRQAGWKGYWIDAASTLRMD  103 (147)
T ss_dssp             HHHHHHHHHHHTTCCSEEEESSSTTTTC
T ss_pred             HHHHHhHHHHHcCCceEEEeCCcccccc
Confidence            2   34445566765 466667764433

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.41  E-value=0.00074  Score=49.83  Aligned_cols=73  Identities=12%  Similarity=0.086  Sum_probs=58.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCcEEEEcCCc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG  173 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d~Vi~~~~~  173 (294)
                      .+.+|.|.|| |.+|+.++....+.|+++++++.+++.-....  .-+++.+|+.|.+.+.++..  .+|+|.+=.+.
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v--a~~~i~~~~~d~~~l~~~~~~~~~DviT~E~En   84 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHV--AHRSHVINMLDGDALRRVVELEKPHYIVPEIEA   84 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG--SSEEEECCTTCHHHHHHHHHHHCCSEEEECSSC
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc--CCeEEECCCCCHHHHHHHHHhhCCceEEEEecC
Confidence            4678999996 99999999999999999999998876433222  24678899999999988774  56999765443

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.40  E-value=0.00068  Score=49.89  Aligned_cols=90  Identities=12%  Similarity=0.100  Sum_probs=65.3

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh-hc-CCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-SF-GTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~-~~-~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      .++.+++|+|.|+ |.+|..-++.|++.|.+|+++......... .. ...+++....+.+     +.+.+++.|+.++.
T Consensus         8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~dl~~~~lv~~at~   81 (113)
T d1pjqa1           8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDE-----TLLDSCWLAIAATD   81 (113)
T ss_dssp             ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCG-----GGGTTCSEEEECCS
T ss_pred             EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCH-----HHhCCCcEEeecCC
Confidence            4567899999997 999999999999999999999876654322 22 2467888777764     34778899998844


Q ss_pred             ch-----HHhhhhhcCCCEEEEecc
Q 022625          173 GF-----ISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       173 ~~-----~~~~~~~~gv~r~V~vSs  192 (294)
                      ..     +...+++.|+  +|++..
T Consensus        82 d~~~n~~i~~~a~~~~i--lVNv~D  104 (113)
T d1pjqa1          82 DDTVNQRVSDAAESRRI--FCNVVD  104 (113)
T ss_dssp             CHHHHHHHHHHHHHTTC--EEEETT
T ss_pred             CHHHHHHHHHHHHHcCC--EEEeCC
Confidence            32     4445566654  677653

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.34  E-value=0.00011  Score=50.87  Aligned_cols=40  Identities=13%  Similarity=0.166  Sum_probs=36.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchh
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM  137 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~  137 (294)
                      ++++|+|+||+|++|...++.+...|++|+++++++++.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~   70 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHE   70 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHH
Confidence            4689999999999999999988899999999999987754

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.32  E-value=0.00021  Score=56.14  Aligned_cols=66  Identities=12%  Similarity=0.089  Sum_probs=48.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      |+|.|.|+ |.+|..+++.|.++|++|.+.+|+++........++.....+  +    .+.++++|+||.+.+
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~--~----~~~~~~~DiIilavp   66 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQ--D----LSLLQTAKIIFLCTP   66 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEES--C----GGGGTTCSEEEECSC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeee--e----cccccccccccccCc
Confidence            68999987 999999999999999999999999876554333222111111  1    136789999998843

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.17  E-value=0.00062  Score=53.86  Aligned_cols=70  Identities=13%  Similarity=0.014  Sum_probs=49.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc---CCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      ...+|+|+|.|| |+.++.++..|.+.|.+|.++.|+.+++.+..   .....+...+..+.     ....+|.||+++
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~-----~~~~~dliIN~T   87 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL-----EGHEFDLIINAT   87 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG-----TTCCCSEEEECC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccc-----cccccceeeccc
Confidence            456899999997 89999999999999999999999998765432   21111222233221     135689999983

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.16  E-value=0.00016  Score=57.23  Aligned_cols=71  Identities=10%  Similarity=0.067  Sum_probs=50.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCC-CCHHHHHHHhcCCcEEEEc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA-SNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~-~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ++.+|+|.|+ |.+|...++.+...|.+|+++++++++......-+.+.+. |. .+.+..+...+++|+++.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i-~~~~~~~~~~~~~~~~d~vi~~   98 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYI-ATLEEGDWGEKYFDTFDLIVVC   98 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEE-EGGGTSCHHHHSCSCEEEEEEC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEe-eccchHHHHHhhhcccceEEEE
Confidence            5789999997 9999999888878899999999998876543221222221 22 1223445566778999987

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.12  E-value=0.00034  Score=56.04  Aligned_cols=94  Identities=11%  Similarity=-0.033  Sum_probs=54.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccc---hhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC-c
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN---AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-G  173 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~---~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~-~  173 (294)
                      |++|.|.||||++|+++++.|.++- .++..+..+...   ..+..+....-......+.+   ...+++|++|.+.+ +
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~---~~~~~~dvvf~a~p~~   77 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPE---KVSKNCDVLFTALPAG   77 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHH---HHHHHCSEEEECCSTT
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHh---HhccccceEEEccccH
Confidence            5789999999999999999998864 466666433221   22222211111112223443   34557999999843 3


Q ss_pred             hHHhhhhhcCCCEEEEeccccc
Q 022625          174 FISNAGSLKGVQHVILLSQLSV  195 (294)
Q Consensus       174 ~~~~~~~~~gv~r~V~vSs~~~  195 (294)
                      .-.+.+.+..-.++|=.|+..-
T Consensus        78 ~s~~~~~~~~~~~VIDlSadfR   99 (176)
T d1vkna1          78 ASYDLVRELKGVKIIDLGADFR   99 (176)
T ss_dssp             HHHHHHTTCCSCEEEESSSTTT
T ss_pred             HHHHHHHhhccceEEecCcccc
Confidence            3333333333346777777643

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.11  E-value=0.0001  Score=59.27  Aligned_cols=98  Identities=7%  Similarity=-0.076  Sum_probs=60.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-CCcEEEEcCCch-HH
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSIICPSEGF-IS  176 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-~~d~Vi~~~~~~-~~  176 (294)
                      +.+|+|+||+|++|...++.....|++|+++++++++.......+.+.+. |..+.+..+.+.+ ..|.+|.+..+. +.
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~vi-~~~~~~~~~~l~~~~~~~vvD~Vgg~~~~  110 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVL-PRDEFAESRPLEKQVWAGAIDTVGDKVLA  110 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEEE-EGGGSSSCCSSCCCCEEEEEESSCHHHHH
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhcccccc-ccccHHHHHHHHhhcCCeeEEEcchHHHH
Confidence            46899999999999999999989999999999999885543322333322 2222111111122 248888885443 22


Q ss_pred             hhhhhc-CCCEEEEeccccccc
Q 022625          177 NAGSLK-GVQHVILLSQLSVYR  197 (294)
Q Consensus       177 ~~~~~~-gv~r~V~vSs~~~~~  197 (294)
                      ...... .-.|+|.++......
T Consensus       111 ~~l~~l~~~Griv~~G~~~~~~  132 (177)
T d1o89a2         111 KVLAQMNYGGCVAACGLAGGFT  132 (177)
T ss_dssp             HHHHTEEEEEEEEECCCTTCSC
T ss_pred             HHHHHhccccceEeecccCCcc
Confidence            222211 124888887665443

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.09  E-value=0.0014  Score=50.60  Aligned_cols=65  Identities=8%  Similarity=0.151  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccchhh---------hcCCCcEEeecCCCCHHHHHHHhcCCcE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALRGVRS  166 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~~~---------~~~~~v~~v~~D~~d~~~l~~~l~~~d~  166 (294)
                      ++++|.|.|+ |.+|..++..|+.+|  .+|++++++++++..         .+.....+..+|+       +.++++|+
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~adi   75 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKDADL   75 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhccccE
Confidence            4679999996 999999999999988  589999998865321         1122344555554       24789999


Q ss_pred             EEEc
Q 022625          167 IICP  170 (294)
Q Consensus       167 Vi~~  170 (294)
                      ||.+
T Consensus        76 vvit   79 (146)
T d1ez4a1          76 VVIT   79 (146)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            9997

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.07  E-value=0.0037  Score=47.91  Aligned_cols=42  Identities=14%  Similarity=0.209  Sum_probs=37.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME  138 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~  138 (294)
                      ..+++|.|.|+.|.+|+.+++.|.++||+|.+.+|+.....+
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~   48 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAE   48 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHH
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccc
Confidence            457899999999999999999999999999999998765443

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.06  E-value=0.00049  Score=54.21  Aligned_cols=94  Identities=12%  Similarity=0.067  Sum_probs=63.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC--ch
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--GF  174 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~--~~  174 (294)
                      .++.+|+|.|+ |.+|...++.+...|++++++++++++......-+.+. ..|..+........+++|++|.+.+  ..
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~-~i~~~~~~~~~~~~~~~D~vid~~g~~~~  106 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADE-VVNSRNADEMAAHLKSFDFILNTVAAPHN  106 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSE-EEETTCHHHHHTTTTCEEEEEECCSSCCC
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCCcE-EEECchhhHHHHhcCCCceeeeeeecchh
Confidence            35799999997 99999999888889999999998887654322112222 2466777777777788999998843  22


Q ss_pred             HHhhhhhcC-CCEEEEecc
Q 022625          175 ISNAGSLKG-VQHVILLSQ  192 (294)
Q Consensus       175 ~~~~~~~~g-v~r~V~vSs  192 (294)
                      +........ -.++++++.
T Consensus       107 ~~~~~~~l~~~G~iv~~G~  125 (168)
T d1uufa2         107 LDDFTTLLKRDGTMTLVGA  125 (168)
T ss_dssp             HHHHHTTEEEEEEEEECCC
T ss_pred             HHHHHHHHhcCCEEEEecc
Confidence            333322211 147777764

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.02  E-value=0.00099  Score=51.43  Aligned_cols=69  Identities=19%  Similarity=0.212  Sum_probs=46.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCccchhhh--cC-CCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMES--FG-TYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~~~~~~~--~~-~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      +|.|+||+|.+|+.++..|+.++.  ++++++.++.+....  .. ..+..... ........+.++++|+||.+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~-~~~~~~~~~~~~~aDivVit   75 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKG-YLGPEQLPDCLKGCDVVVIP   75 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEE-EESGGGHHHHHTTCSEEEEC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCe-EEcCCChHHHhCCCCEEEEC
Confidence            799999999999999999998874  788888776543221  11 11111111 11234556789999999997

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.91  E-value=0.005  Score=47.95  Aligned_cols=93  Identities=15%  Similarity=0.107  Sum_probs=59.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhc--CCCcEEeecC--CCCHHHHHHHh-----cCCcEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGD--ASNKKFLKTAL-----RGVRSII  168 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~v~~v~~D--~~d~~~l~~~l-----~~~d~Vi  168 (294)
                      ++.+|+|+| +|.+|...++.+...|.+|+++.+++++.....  +.... +..|  -.+...+.+.+     .++|+||
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~-~~~~~~~~~~~~~~~~~~~~~g~g~D~vi  103 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVT-LVVDPAKEEESSIIERIRSAIGDLPNVTI  103 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE-EECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEE-EeccccccccchhhhhhhcccccCCceee
Confidence            468999998 599999999999899999999999998765332  22222 2222  23333333333     3689999


Q ss_pred             EcCCc--hHHhhhhhc-CCCEEEEecc
Q 022625          169 CPSEG--FISNAGSLK-GVQHVILLSQ  192 (294)
Q Consensus       169 ~~~~~--~~~~~~~~~-gv~r~V~vSs  192 (294)
                      .+.++  .+..+.+.. .-.++++++.
T Consensus       104 d~~g~~~~~~~a~~~~~~~G~iv~~G~  130 (170)
T d1e3ja2         104 DCSGNEKCITIGINITRTGGTLMLVGM  130 (170)
T ss_dssp             ECSCCHHHHHHHHHHSCTTCEEEECSC
T ss_pred             ecCCChHHHHHHHHHHhcCCceEEEec
Confidence            98543  223222221 2257888874

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.87  E-value=0.00071  Score=55.01  Aligned_cols=70  Identities=7%  Similarity=-0.093  Sum_probs=49.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCC-------------CCHHHHHHHhcCCcE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA-------------SNKKFLKTALRGVRS  166 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~-------------~d~~~l~~~l~~~d~  166 (294)
                      |+|.|.|. |++|..++..|+++|++|++++.++++..........+..-++             .-...+.++++.+|+
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~   79 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence            68999986 9999999999999999999999988776554322221111111             111234566788899


Q ss_pred             EEEc
Q 022625          167 IICP  170 (294)
Q Consensus       167 Vi~~  170 (294)
                      +|.+
T Consensus        80 i~i~   83 (202)
T d1mv8a2          80 SFIC   83 (202)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            9988

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.87  E-value=0.00047  Score=54.03  Aligned_cols=63  Identities=14%  Similarity=0.035  Sum_probs=49.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      |+|.|.|- |.+|+.+++.|+++|++|++..|++++.......+...    ..   +..++++++|+||.+
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~----~~---~~~e~~~~~d~ii~~   63 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET----AS---TAKAIAEQCDVIITM   63 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE----CS---SHHHHHHHCSEEEEC
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhh----cc---cHHHHHhCCCeEEEE
Confidence            67999996 99999999999999999999999998876554333332    12   245677889999988

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.85  E-value=0.0015  Score=50.32  Aligned_cols=91  Identities=15%  Similarity=0.075  Sum_probs=52.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCch-
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-  174 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~~-  174 (294)
                      .++|.|.||||++|+++++-|.+++   .++..+..+...........-+....++.+     ..+.++|++|.+.+.- 
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~-----~~~~~~d~vf~a~p~~~   76 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDS-----FDFSSVGLAFFAAAAEV   76 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGG-----CCGGGCSEEEECSCHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchh-----hhhccceEEEecCCcch
Confidence            4789999999999999999998665   477766544332221110011111111111     2356789999885432 


Q ss_pred             ---HHhhhhhcCCCEEEEeccccc
Q 022625          175 ---ISNAGSLKGVQHVILLSQLSV  195 (294)
Q Consensus       175 ---~~~~~~~~gv~r~V~vSs~~~  195 (294)
                         +.....+.| .++|-.|+..-
T Consensus        77 s~~~~~~~~~~g-~~VID~Ss~fR   99 (144)
T d2hjsa1          77 SRAHAERARAAG-CSVIDLSGALE   99 (144)
T ss_dssp             HHHHHHHHHHTT-CEEEETTCTTT
T ss_pred             hhhhccccccCC-ceEEeechhhc
Confidence               223334445 35776676543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.81  E-value=0.00066  Score=52.74  Aligned_cols=79  Identities=6%  Similarity=-0.034  Sum_probs=55.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCC-CcEEeecCCCCHHHHHHHhcCCcEEEEc-CCchHHh
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP-SEGFISN  177 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~-~~~~~~~  177 (294)
                      |+|.+.|+ |.+|+.+++.|++.|+++++..|+.++..+.... ++.+.    .+   ..++++++|+||.+ .+..+.+
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~----~~---~~~~~~~~dvIilavkp~~~~~   72 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA----MS---HQDLIDQVDLVILGIKPQLFET   72 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC----SS---HHHHHHTCSEEEECSCGGGHHH
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee----ch---hhhhhhccceeeeecchHhHHH
Confidence            67999986 9999999999999999999999998776543211 22221    22   45667899999988 4555555


Q ss_pred             hhhhcCCCE
Q 022625          178 AGSLKGVQH  186 (294)
Q Consensus       178 ~~~~~gv~r  186 (294)
                      .+...+.++
T Consensus        73 vl~~l~~~~   81 (152)
T d2ahra2          73 VLKPLHFKQ   81 (152)
T ss_dssp             HHTTSCCCS
T ss_pred             Hhhhcccce
Confidence            555443333

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.81  E-value=0.0043  Score=47.71  Aligned_cols=67  Identities=9%  Similarity=0.076  Sum_probs=45.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccc--hh----hh------cCCCcEEeecCCCCHHHHHHHhcCCc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN--AM----ES------FGTYVESMAGDASNKKFLKTALRGVR  165 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~--~~----~~------~~~~v~~v~~D~~d~~~l~~~l~~~d  165 (294)
                      |+|.|.||+|.+|+.++..|+.++  .++.+++++++.  +.    +.      ....+++...--.|    .+.++++|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d----~~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDEN----LRIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTC----GGGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcch----HHHhccce
Confidence            689999999999999999999988  488888887532  11    11      11233332221112    24688999


Q ss_pred             EEEEc
Q 022625          166 SIICP  170 (294)
Q Consensus       166 ~Vi~~  170 (294)
                      +||.+
T Consensus        77 vVVit   81 (145)
T d1hyea1          77 VVIIT   81 (145)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            99997

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.80  E-value=0.00019  Score=58.23  Aligned_cols=75  Identities=12%  Similarity=0.042  Sum_probs=53.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC--------CCcEEeecCCCCHHHHHHHhcCCcEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--------TYVESMAGDASNKKFLKTALRGVRSI  167 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--------~~v~~v~~D~~d~~~l~~~l~~~d~V  167 (294)
                      .+.+++|.|.|| |.-|..++..|.+.|++|++..|+++.......        ++++. .-++.-...+.++++++|+|
T Consensus         4 ~~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~i   81 (189)
T d1n1ea2           4 LLYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEII   81 (189)
T ss_dssp             CCCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCE
T ss_pred             cceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCEE
Confidence            345678999997 999999999999999999999999876543210        11211 11221123467889999999


Q ss_pred             EEcCC
Q 022625          168 ICPSE  172 (294)
Q Consensus       168 i~~~~  172 (294)
                      |.+.+
T Consensus        82 iiavP   86 (189)
T d1n1ea2          82 LFVIP   86 (189)
T ss_dssp             EECSC
T ss_pred             EEcCc
Confidence            99844

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.79  E-value=0.0012  Score=51.14  Aligned_cols=73  Identities=15%  Similarity=0.055  Sum_probs=51.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchhhhcCC-CcEEeecCCCCHHHHHHHhcCCcEEEEcC-CchHH
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS-EGFIS  176 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~-~~~~~  176 (294)
                      |+|.+.|+ |.+|..+++.|++.| ++|.+..|++++....... ++... -|..       .+..+|+||.+. +..+.
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~~-------~v~~~Div~lavkP~~~~   71 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATLP-------ELHSDDVLILAVKPQDME   71 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSCC-------CCCTTSEEEECSCHHHHH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-cccc-------cccccceEEEecCHHHHH
Confidence            68999997 999999999999887 8999999999876554322 34332 2222       146689999884 44455


Q ss_pred             hhhhh
Q 022625          177 NAGSL  181 (294)
Q Consensus       177 ~~~~~  181 (294)
                      +.++.
T Consensus        72 ~v~~~   76 (152)
T d1yqga2          72 AACKN   76 (152)
T ss_dssp             HHHTT
T ss_pred             HhHHH
Confidence            54444

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.77  E-value=0.0025  Score=52.67  Aligned_cols=70  Identities=7%  Similarity=0.096  Sum_probs=51.3

Q ss_pred             cCCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHH----
Q 022625           96 EEARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK----  155 (294)
Q Consensus        96 ~~~~~~vlVtGa----------------tG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~----  155 (294)
                      ++.|++||||+|                ||..|.+|++.+..+|++|+++.-....   ..+.++..+..  .+.+    
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---~~p~~~~~~~~--~t~~~m~~   77 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---PTPPFVKRVDV--MTALEMEA   77 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---CCCTTEEEEEC--CSHHHHHH
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---Cccccccccee--hhhHHHHH
Confidence            457889999876                7999999999999999999998765432   12345665554  3333    


Q ss_pred             HHHHHhcCCcEEEEc
Q 022625          156 FLKTALRGVRSIICP  170 (294)
Q Consensus       156 ~l~~~l~~~d~Vi~~  170 (294)
                      .+.+.+..+|++|++
T Consensus        78 ~~~~~~~~~D~~i~a   92 (223)
T d1u7za_          78 AVNASVQQQNIFIGC   92 (223)
T ss_dssp             HHHHHGGGCSEEEEC
T ss_pred             HHHhhhccceeEeee
Confidence            334556788999997

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.74  E-value=0.0012  Score=51.06  Aligned_cols=64  Identities=8%  Similarity=0.013  Sum_probs=47.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      |+|.|.|. |.+|+.+++.|+++|++|++..|+.++.......++.+.  +     +..++++.+|+||.+.
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~-----~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--E-----TSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--E-----CCHHHHHTSSEEEECS
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhccccc--c-----cHHHHHhhcCeEEEEe
Confidence            67999986 999999999999999999998887766543332222211  1     1346788999999983

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.73  E-value=0.0017  Score=51.73  Aligned_cols=72  Identities=8%  Similarity=0.045  Sum_probs=49.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc--hhhhcC----C--CcEEeecCCCCHHHHHHHhcCCcEEEEcC
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESFG----T--YVESMAGDASNKKFLKTALRGVRSIICPS  171 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~~----~--~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~  171 (294)
                      |+|.|.|| |..|..++..|++.|++|.+..|..++  ......    +  .......++.-...+.++++++|+||.+.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            78999997 999999999999999999999985432  222111    1  11111112222356788899999999984


Q ss_pred             C
Q 022625          172 E  172 (294)
Q Consensus       172 ~  172 (294)
                      +
T Consensus        80 p   80 (180)
T d1txga2          80 S   80 (180)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=0.0078  Score=46.96  Aligned_cols=95  Identities=9%  Similarity=-0.028  Sum_probs=61.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCc-EEeecCCCCHHHHHHHh-----cCCcEEEEc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYV-ESMAGDASNKKFLKTAL-----RGVRSIICP  170 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v-~~v~~D~~d~~~l~~~l-----~~~d~Vi~~  170 (294)
                      ++.+|+|.|+ |.+|...++.+...|. +|+++.++++++.....-+. +++..+-.+.....+.+     .++|+||.+
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~  104 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIEC  104 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCceEEEec
Confidence            4679999997 9999999999999998 79999999887654322223 23333334544444333     367999998


Q ss_pred             CCch--HHhhhhhc-CCCEEEEeccc
Q 022625          171 SEGF--ISNAGSLK-GVQHVILLSQL  193 (294)
Q Consensus       171 ~~~~--~~~~~~~~-gv~r~V~vSs~  193 (294)
                      .+..  +..+.... .-.++++++..
T Consensus       105 ~G~~~~~~~a~~~~~~gG~iv~~G~~  130 (171)
T d1pl8a2         105 TGAEASIQAGIYATRSGGTLVLVGLG  130 (171)
T ss_dssp             SCCHHHHHHHHHHSCTTCEEEECSCC
T ss_pred             cCCchhHHHHHHHhcCCCEEEEEecC
Confidence            5532  22222221 12578888743

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.60  E-value=0.0045  Score=48.96  Aligned_cols=94  Identities=7%  Similarity=0.020  Sum_probs=57.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCc-EEeecCCCCHHH----HHHHh--cCCcEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYV-ESMAGDASNKKF----LKTAL--RGVRSII  168 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v-~~v~~D~~d~~~----l~~~l--~~~d~Vi  168 (294)
                      .++.+|+|+|| |.||...++.+...|+ +|+++.+++++.+....-+. +++.-.-.+...    +.+..  .++|+||
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvi  105 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFIL  105 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred             CCCCEEEEECC-CccchhheecccccccccccccccccccccccccccceEEEeccccchHHHHHHHHHhhCCCCceEEe
Confidence            35789999997 9999999999999997 79999999887543322222 222222123222    22222  2579999


Q ss_pred             EcCCc--hHHhhhhhcC-CCEEEEec
Q 022625          169 CPSEG--FISNAGSLKG-VQHVILLS  191 (294)
Q Consensus       169 ~~~~~--~~~~~~~~~g-v~r~V~vS  191 (294)
                      .+.++  .+..+..... -.++++++
T Consensus       106 d~vG~~~~~~~a~~~l~~~G~iv~~G  131 (182)
T d1vj0a2         106 EATGDSRALLEGSELLRRGGFYSVAG  131 (182)
T ss_dssp             ECSSCTTHHHHHHHHEEEEEEEEECC
T ss_pred             ecCCchhHHHHHHHHhcCCCEEEEEe
Confidence            98442  2332222111 14777776

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.58  E-value=0.0015  Score=51.03  Aligned_cols=64  Identities=8%  Similarity=0.062  Sum_probs=49.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      |++|.|.|- |.+|+.+++.|+++||+|.+..|++++.......+...       .....+.++.+|+++.+
T Consensus         1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~-------~~~~~e~~~~~diii~~   64 (162)
T d3cuma2           1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASA-------ARSARDAVQGADVVISM   64 (162)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-------CSSHHHHHTSCSEEEEC
T ss_pred             CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccc-------cchhhhhccccCeeeec
Confidence            578999985 99999999999999999999999988765443322211       12345678889999887

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.55  E-value=0.00059  Score=54.79  Aligned_cols=97  Identities=18%  Similarity=0.115  Sum_probs=54.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EEcCccchhhhcC-CCcEEeecCCCCH---HHHHHHh-cCCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKRNAMESFG-TYVESMAGDASNK---KFLKTAL-RGVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~-~~R~~~~~~~~~~-~~v~~v~~D~~d~---~~l~~~l-~~~d~Vi~~~~  172 (294)
                      +.+|||+||+|.+|...++-+...|.++++ +++++++...... -+.+ ...|..++   +.+++.. +++|+||.+.+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad-~vi~~~~~~~~~~~~~~~~~GvDvv~D~vG  109 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD-AAVNYKTGNVAEQLREACPGGVDVYFDNVG  109 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS-EEEETTSSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce-EEeeccchhHHHHHHHHhccCceEEEecCC
Confidence            478999999999999999888889986555 4555554332211 1111 12234332   3344433 46899999965


Q ss_pred             chHH-hhhhhc-CCCEEEEecccccc
Q 022625          173 GFIS-NAGSLK-GVQHVILLSQLSVY  196 (294)
Q Consensus       173 ~~~~-~~~~~~-gv~r~V~vSs~~~~  196 (294)
                      +-.. ..+... .-.|+|.+...+.+
T Consensus       110 g~~~~~~~~~l~~~G~iv~~G~~s~~  135 (187)
T d1vj1a2         110 GDISNTVISQMNENSHIILCGQISQY  135 (187)
T ss_dssp             HHHHHHHHTTEEEEEEEEEC------
T ss_pred             chhHHHHhhhccccccEEEecccccc
Confidence            5322 222211 22578888665543

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.53  E-value=0.0061  Score=46.92  Aligned_cols=66  Identities=15%  Similarity=0.179  Sum_probs=47.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCccchhh----h------cCCCcEEeecCCCCHHHHHHHhcCC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME----S------FGTYVESMAGDASNKKFLKTALRGV  164 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~~~~~~----~------~~~~v~~v~~D~~d~~~l~~~l~~~  164 (294)
                      ..+++|.|.|| |.+|+.++..|+.++.  ++.+++++++++..    +      ....+.+...|+       +.++++
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~da   75 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDA   75 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTC
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccc
Confidence            35689999997 9999999999998874  79999888765221    1      112344444443       458899


Q ss_pred             cEEEEc
Q 022625          165 RSIICP  170 (294)
Q Consensus       165 d~Vi~~  170 (294)
                      |+||.+
T Consensus        76 Dvvvit   81 (148)
T d1ldna1          76 DLVVIC   81 (148)
T ss_dssp             SEEEEC
T ss_pred             eeEEEe
Confidence            999987

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.50  E-value=0.0012  Score=52.27  Aligned_cols=95  Identities=13%  Similarity=0.046  Sum_probs=59.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHH-----hcCCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-----LRGVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~-----l~~~d~Vi~~~~  172 (294)
                      ++.+|||+||+|++|...++-....|++|++.++++++......-+.+.+. |..  +...+.     -+++|+||.+.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi-~~~--~~~~~~~~~~~~~gvd~vid~vg   99 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVI-SRE--DVYDGTLKALSKQQWQGAVDPVG   99 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEE-EHH--HHCSSCCCSSCCCCEEEEEESCC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceE-ecc--chhchhhhcccCCCceEEEecCc
Confidence            356899999999999999988888899999999998876544322222221 211  111111     135799998855


Q ss_pred             ch-HHhhhhhc-CCCEEEEeccccc
Q 022625          173 GF-ISNAGSLK-GVQHVILLSQLSV  195 (294)
Q Consensus       173 ~~-~~~~~~~~-gv~r~V~vSs~~~  195 (294)
                      +. +....... .-.|+|.+.....
T Consensus       100 g~~~~~~~~~l~~~G~iv~~G~~~g  124 (167)
T d1tt7a2         100 GKQLASLLSKIQYGGSVAVSGLTGG  124 (167)
T ss_dssp             THHHHHHHTTEEEEEEEEECCCSSC
T ss_pred             HHHHHHHHHHhccCceEEEeeccCC
Confidence            43 33322211 1247887766543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.0049  Score=48.30  Aligned_cols=70  Identities=16%  Similarity=0.046  Sum_probs=55.6

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG  173 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~  173 (294)
                      ..+.+|+++|.| .|.||+.+++.|...|.+|++...+|-++.+..-.+++..        .+++++...|++|.+++.
T Consensus        20 ~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~--------~~~~a~~~adivvtaTGn   89 (163)
T d1li4a1          20 VMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVT--------TMDEACQEGNIFVTTTGC   89 (163)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC--------CHHHHTTTCSEEEECSSC
T ss_pred             ceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEee--------ehhhhhhhccEEEecCCC
Confidence            356799999999 5999999999999999999999999877655443333332        356788889999988553

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.36  E-value=0.0019  Score=50.78  Aligned_cols=41  Identities=10%  Similarity=0.192  Sum_probs=35.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhh
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES  139 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~  139 (294)
                      ++++|+|.|+ |+.++.++..|.+.|. +|.++.|+.+++..+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L   57 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYL   57 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHH
Confidence            4689999997 8999999999999996 899999998876543

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.35  E-value=0.002  Score=50.41  Aligned_cols=93  Identities=11%  Similarity=0.110  Sum_probs=58.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCc-EEeecCCCCH-HHHHHHh--cCCcEEEEcCC
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYV-ESMAGDASNK-KFLKTAL--RGVRSIICPSE  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v-~~v~~D~~d~-~~l~~~l--~~~d~Vi~~~~  172 (294)
                      ++.+|+|+|++|.+|...++.+...|. +|+++.+++++......-+. +++..+-.|. +.+.+..  .++|++|.+.+
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g  106 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNN  106 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCC
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeeccCCcCHHHHHHHHhhcccchhhhcccc
Confidence            578999999999999999999988885 88888888876543322122 3333332332 3333333  35799999854


Q ss_pred             ch--HHh---hhhhcCCCEEEEecc
Q 022625          173 GF--ISN---AGSLKGVQHVILLSQ  192 (294)
Q Consensus       173 ~~--~~~---~~~~~gv~r~V~vSs  192 (294)
                      +-  +..   +++..  .+++.++-
T Consensus       107 ~~~~~~~a~~~l~~~--G~iv~~G~  129 (170)
T d1jvba2         107 SEKTLSVYPKALAKQ--GKYVMVGL  129 (170)
T ss_dssp             CHHHHTTGGGGEEEE--EEEEECCS
T ss_pred             cchHHHhhhhhcccC--CEEEEecc
Confidence            32  222   22222  47888864

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.32  E-value=0.01  Score=45.22  Aligned_cols=63  Identities=14%  Similarity=0.197  Sum_probs=42.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCccchhh----hc-----CCCcEEeecCCCCHHHHHHHhcCCcEEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME----SF-----GTYVESMAGDASNKKFLKTALRGVRSII  168 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~~~~~~----~~-----~~~v~~v~~D~~d~~~l~~~l~~~d~Vi  168 (294)
                      ++|.|.|| |.+|+.++..|+.++.  ++.+++++++++..    +.     ........+|       .+.++++|+|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceEE
Confidence            58899997 9999999999999874  89999988765321    11     1122222222       24588999999


Q ss_pred             Ec
Q 022625          169 CP  170 (294)
Q Consensus       169 ~~  170 (294)
                      .+
T Consensus        74 it   75 (142)
T d1y6ja1          74 VT   75 (142)
T ss_dssp             EC
T ss_pred             Ee
Confidence            87

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.25  E-value=0.0042  Score=48.92  Aligned_cols=69  Identities=17%  Similarity=0.186  Sum_probs=56.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      +..+|+|.|| |-.|..-++.....|.+|.+++.++++++..   ++..++..   ..+.+.+++.++.+|+||.+
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~~aDivI~a  102 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGA  102 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEEC
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceee---hhhhhhHHHhhccCcEEEEe
Confidence            4579999998 9999999999999999999999998876543   33334433   46778899999999999997

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.25  E-value=0.018  Score=44.79  Aligned_cols=69  Identities=10%  Similarity=0.070  Sum_probs=48.4

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCccchhh----h-----c-CCCcEEeecCCCCHHHHHHHh
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME----S-----F-GTYVESMAGDASNKKFLKTAL  161 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~~~~~~----~-----~-~~~v~~v~~D~~d~~~l~~~l  161 (294)
                      +...+.++|.|.|+ |.+|..++..|+.+|.  ++.+++++++.+..    +     + ........+|+       +.+
T Consensus        15 ~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~-------~~~   86 (160)
T d1i0za1          15 EATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY-------SVT   86 (160)
T ss_dssp             CCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG-------GGG
T ss_pred             cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch-------hhc
Confidence            34556789999997 9999999999999985  89888888765321    1     1 11222222333       248


Q ss_pred             cCCcEEEEc
Q 022625          162 RGVRSIICP  170 (294)
Q Consensus       162 ~~~d~Vi~~  170 (294)
                      +++|+|+.+
T Consensus        87 ~~adiVVit   95 (160)
T d1i0za1          87 ANSKIVVVT   95 (160)
T ss_dssp             TTCSEEEEC
T ss_pred             ccccEEEEe
Confidence            899999997

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.22  E-value=0.0031  Score=49.80  Aligned_cols=69  Identities=16%  Similarity=0.208  Sum_probs=50.0

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---cCC--CcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGT--YVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~--~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ...+++|+|.|+ |+.++.++..|.+.+.+|+++.|+.+++...   +..  .+.....|-.       .+..+|.+|++
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiIN~   86 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVINA   86 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEEEC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc-------cccccceeeec
Confidence            346799999997 8899999999999889999999998775543   221  2333332211       25678999998


Q ss_pred             CC
Q 022625          171 SE  172 (294)
Q Consensus       171 ~~  172 (294)
                      ++
T Consensus        87 tp   88 (171)
T d1p77a1          87 TS   88 (171)
T ss_dssp             CC
T ss_pred             cc
Confidence            43

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.22  E-value=0.0043  Score=49.50  Aligned_cols=60  Identities=20%  Similarity=0.255  Sum_probs=48.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      +.+++|.|.|. |.||+.+++.|...|.+|++..|.+.....      ..       .++++++++.+|+|+..
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~~------~~-------~~~l~ell~~sDiv~~~   99 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGPW------RF-------TNSLEEALREARAAVCA   99 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSSS------CC-------BSCSHHHHTTCSEEEEC
T ss_pred             ccCceEEEecc-ccccccceeeeeccccccccccccccccce------ee-------eechhhhhhccchhhcc
Confidence            56899999997 899999999999999999999887643211      10       12467899999999986

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.17  E-value=0.0035  Score=49.26  Aligned_cols=75  Identities=15%  Similarity=0.048  Sum_probs=50.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEe--ecCCCC-HHHHHHHh--cCCcEEEEc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESM--AGDASN-KKFLKTAL--RGVRSIICP  170 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v--~~D~~d-~~~l~~~l--~~~d~Vi~~  170 (294)
                      .++.+|+|.|+ |++|...+.++...|. +|+++.+++++.......+.+..  ..+-.+ .....+..  .++|++|.+
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~  105 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV  105 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEec
Confidence            36789999999 7899999999999985 88888888887654433222222  223222 23333333  478999998


Q ss_pred             CC
Q 022625          171 SE  172 (294)
Q Consensus       171 ~~  172 (294)
                      .+
T Consensus       106 ~G  107 (176)
T d2jhfa2         106 IG  107 (176)
T ss_dssp             SC
T ss_pred             CC
Confidence            44

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.17  E-value=0.01  Score=45.92  Aligned_cols=93  Identities=8%  Similarity=0.076  Sum_probs=56.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCc-EEeecCCCC-HHHHHHHhcCCcEEEEc-CCc-
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASN-KKFLKTALRGVRSIICP-SEG-  173 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v-~~v~~D~~d-~~~l~~~l~~~d~Vi~~-~~~-  173 (294)
                      ++.+|+|.|+ |.+|...++-+...|.+|+++++++++......-+. +++.-+-.| .+.+.+...+.+.+|.. ..+ 
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~~~~i~~~~~~~  105 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNS  105 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEECCSCHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCccccccccchhHHHHHHHhhcCCcccccccccch
Confidence            5789999987 999999998888899999999999877554322222 233222222 24455555666555555 222 


Q ss_pred             hHHhhhhhcC-CCEEEEec
Q 022625          174 FISNAGSLKG-VQHVILLS  191 (294)
Q Consensus       174 ~~~~~~~~~g-v~r~V~vS  191 (294)
                      .+..+....+ -.++|.++
T Consensus       106 ~~~~~~~~l~~~G~iv~~G  124 (166)
T d1llua2         106 AFGQAIGMARRGGTIALVG  124 (166)
T ss_dssp             HHHHHHTTEEEEEEEEECC
T ss_pred             HHHHHHHHhcCCcEEEEEE
Confidence            2222221111 14677775

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.15  E-value=0.006  Score=48.20  Aligned_cols=96  Identities=10%  Similarity=0.076  Sum_probs=62.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcE-Ee-ecCCCC-HHHHHHHh--cCCcEEEEc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVE-SM-AGDASN-KKFLKTAL--RGVRSIICP  170 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~-~v-~~D~~d-~~~l~~~l--~~~d~Vi~~  170 (294)
                      .++.+|+|+|+ |.+|...++.+...|. +|+++++++++++....-+.+ ++ .-|-.+ .+.+.+..  .++|++|.+
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~  106 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEV  106 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEEC
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccccceEEEEe
Confidence            45789999997 9999999999999995 899999999886543221222 22 122222 34444434  478999998


Q ss_pred             CCch--HHhhhhh--cCCCEEEEeccc
Q 022625          171 SEGF--ISNAGSL--KGVQHVILLSQL  193 (294)
Q Consensus       171 ~~~~--~~~~~~~--~gv~r~V~vSs~  193 (294)
                      .++.  +..+...  .+-.++|+++..
T Consensus       107 ~g~~~~~~~a~~~~~~~~G~~v~vG~~  133 (176)
T d1d1ta2         107 IGHLETMIDALASCHMNYGTSVVVGVP  133 (176)
T ss_dssp             SCCHHHHHHHHTTSCTTTCEEEECSCC
T ss_pred             CCchHHHHHHHHHhhcCCeEEEEEEcc
Confidence            5432  3333322  233688888754

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.14  E-value=0.0093  Score=47.00  Aligned_cols=95  Identities=13%  Similarity=0.036  Sum_probs=58.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCc-EEeecCCC--CHHHHHHHh--cCCcEEEEc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYV-ESMAGDAS--NKKFLKTAL--RGVRSIICP  170 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v-~~v~~D~~--d~~~l~~~l--~~~d~Vi~~  170 (294)
                      .++.+|+|+|+ |.||...++.+...|. .|++..++++++.....-+. +++...-.  ....+.+..  .++|++|.+
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~  105 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC  105 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEe
Confidence            35789999986 9999999999999998 56677777777443222122 22221111  223333332  578999998


Q ss_pred             CCc--hHHhhhhh--cCCCEEEEecc
Q 022625          171 SEG--FISNAGSL--KGVQHVILLSQ  192 (294)
Q Consensus       171 ~~~--~~~~~~~~--~gv~r~V~vSs  192 (294)
                      .+.  .+..+...  .+-.++++++-
T Consensus       106 ~G~~~~~~~a~~~~~~g~G~~v~vG~  131 (174)
T d1e3ia2         106 AGTAQTLKAAVDCTVLGWGSCTVVGA  131 (174)
T ss_dssp             SCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred             cccchHHHHHHHHhhcCCeEEEecCC
Confidence            543  33333322  22358888874

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.07  E-value=0.01  Score=46.74  Aligned_cols=95  Identities=14%  Similarity=0.050  Sum_probs=58.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCc-EEeec-CCCCHHHHHHHhc--CCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYV-ESMAG-DASNKKFLKTALR--GVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v-~~v~~-D~~d~~~l~~~l~--~~d~Vi~~~  171 (294)
                      .++.+|+|.|+ |.+|...++.+...|+ +|+++++++++......-+. +++.- |-...+.+.+...  ++|+||.+.
T Consensus        26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~  104 (174)
T d1jqba2          26 EMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAG  104 (174)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGGGSCHHHHHHHHTTTSCEEEEEECS
T ss_pred             CCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccccchhHHHHHHHHhhccCcceEEEcc
Confidence            35789999987 9999999988888997 78888888876543322122 22221 2112344555553  589999984


Q ss_pred             C--chHHhhhhhcC-CCEEEEecc
Q 022625          172 E--GFISNAGSLKG-VQHVILLSQ  192 (294)
Q Consensus       172 ~--~~~~~~~~~~g-v~r~V~vSs  192 (294)
                      +  ..+..+....+ -.++++++-
T Consensus       105 g~~~~~~~a~~~~~~~G~iv~~G~  128 (174)
T d1jqba2         105 GGSETLSQAVKMVKPGGIISNINY  128 (174)
T ss_dssp             SCTTHHHHHHHHEEEEEEEEECCC
T ss_pred             CCHHHHHHHHHHHhcCCEEEEEee
Confidence            3  22333322221 246777764

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.06  E-value=0.015  Score=44.21  Aligned_cols=63  Identities=21%  Similarity=0.307  Sum_probs=44.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccchhhh---------cCCCcEEeecCCCCHHHHHHHhcCCcEEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES---------FGTYVESMAGDASNKKFLKTALRGVRSII  168 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~~~~---------~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi  168 (294)
                      |+|.|.|| |.+|+.++..|+.++  .++.+++++++++...         +.....+...|.       +.++++|+||
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~-------~~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-------ADLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-------GGGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH-------HHhcCCCEEE
Confidence            68999997 999999999998887  4888888887653211         112334333332       3478999999


Q ss_pred             Ec
Q 022625          169 CP  170 (294)
Q Consensus       169 ~~  170 (294)
                      .+
T Consensus        73 it   74 (140)
T d1a5za1          73 VA   74 (140)
T ss_dssp             EC
T ss_pred             Ee
Confidence            98

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.96  E-value=0.0051  Score=48.47  Aligned_cols=71  Identities=14%  Similarity=0.102  Sum_probs=53.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEE-eecCCCCHHHHHHHhcCCcEEEEc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVES-MAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~-v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+|.|.|- |.+|..+++.|+++||+|++..|++++..+....+.+. ...-....+.+.+.+..+|.++.+
T Consensus         2 ~~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~   73 (176)
T d2pgda2           2 QADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILL   73 (176)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEEC
T ss_pred             CCcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEe
Confidence            357899997 99999999999999999999999998876543221110 001134677888889999988877

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.95  E-value=0.0071  Score=44.79  Aligned_cols=38  Identities=13%  Similarity=0.195  Sum_probs=34.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA  136 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~  136 (294)
                      +.++++|.|| |++|-+++..|.++|.+|.++.+.+.-+
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~l   66 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRLM   66 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccccc
Confidence            4689999997 9999999999999999999999987543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.93  E-value=0.0046  Score=48.16  Aligned_cols=68  Identities=12%  Similarity=0.011  Sum_probs=45.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCccchhhhcCCCc-EEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYV-ESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~v-~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ||+|+|.|+ |.+|..+++.|.+.|+  +|++.+|+++........++ ....-+.   +  ......+|.||.+.+
T Consensus         1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~---~--~~~~~~~dlIila~p   71 (171)
T d2g5ca2           1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI---A--KVEDFSPDFVMLSSP   71 (171)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCG---G--GGGGTCCSEEEECSC
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhh---h--hhhccccccccccCC
Confidence            578999996 9999999999999996  67888888776544332221 1111111   1  122346799998844

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=95.90  E-value=0.022  Score=43.56  Aligned_cols=63  Identities=13%  Similarity=0.134  Sum_probs=45.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccchhhh----------cCCCcEEeecCCCCHHHHHHHhcCCcEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVRSI  167 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~~~~----------~~~~v~~v~~D~~d~~~l~~~l~~~d~V  167 (294)
                      |+|.|.|+ |.+|..++..|+.+|  .++++++++++++...          ......+...|+       +.++++|+|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~-------~~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-------AALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-------GGGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH-------HHhccccEE
Confidence            78999996 999999999999887  4888888887653211          111233333343       347899999


Q ss_pred             EEc
Q 022625          168 ICP  170 (294)
Q Consensus       168 i~~  170 (294)
                      |.+
T Consensus        74 Vit   76 (146)
T d1hyha1          74 IST   76 (146)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            987

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.84  E-value=0.0096  Score=44.09  Aligned_cols=37  Identities=14%  Similarity=0.116  Sum_probs=33.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN  135 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~  135 (294)
                      ..++|+|.|| |++|.+++..|.+.|.+|+++.+.+.-
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~~   65 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDRP   65 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCcc
Confidence            4689999997 999999999999999999999887643

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.83  E-value=0.0086  Score=46.78  Aligned_cols=70  Identities=13%  Similarity=0.019  Sum_probs=57.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCCc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG  173 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~  173 (294)
                      ..+.+|+++|.|- |.+|+-+++.|...|.+|++.-.+|-++.+..-+++++..        +.++++..|++|.+++.
T Consensus        19 ~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v~~--------~~~a~~~aDi~vTaTGn   88 (163)
T d1v8ba1          19 FLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVT--------LDEIVDKGDFFITCTGN   88 (163)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECC--------HHHHTTTCSEEEECCSS
T ss_pred             ceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCccCc--------hhHccccCcEEEEcCCC
Confidence            3567999999997 9999999999999999999999999887766555555432        35788999999998553

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.82  E-value=0.0039  Score=50.51  Aligned_cols=64  Identities=14%  Similarity=0.020  Sum_probs=47.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      .+.+++|.|.|- |.||+.+++.|...|.+|++.++.........  .        ....++.++++.+|+|+..
T Consensus        40 el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~--~--------~~~~~l~~~l~~sDii~~~  103 (197)
T d1j4aa1          40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELEKK--G--------YYVDSLDDLYKQADVISLH  103 (197)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHHT--T--------CBCSCHHHHHHHCSEEEEC
T ss_pred             cccCCeEEEecc-cccchhHHHhHhhhcccccccCcccccccccc--e--------eeecccccccccccccccc
Confidence            456899999996 99999999999999999999876654322111  1        1123467788889988876

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.79  E-value=0.012  Score=45.43  Aligned_cols=72  Identities=11%  Similarity=0.117  Sum_probs=50.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCC-C-HHHHHHHhcCCcEEEEc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-N-KKFLKTALRGVRSIICP  170 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~-d-~~~l~~~l~~~d~Vi~~  170 (294)
                      ++.+|+|.|+ |.+|...++.+...|++|+++++++++......-+.+.+...-. | .+.+.+..++.+.+|..
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~  100 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVT  100 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEES
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceecccccchhhhhcccccCCCceEEee
Confidence            5789999986 99999999888899999999999988765433333443332221 2 34456666777666655

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=95.78  E-value=0.028  Score=42.77  Aligned_cols=64  Identities=8%  Similarity=0.185  Sum_probs=44.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCc--cchh----hh-----cCCCcEEeecCCCCHHHHHHHhcCCcE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDK--RNAM----ES-----FGTYVESMAGDASNKKFLKTALRGVRS  166 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~--~~~~----~~-----~~~~v~~v~~D~~d~~~l~~~l~~~d~  166 (294)
                      .+|.|+||+|.+|+.++..|+.++.  ++.+++.+.  +.+.    ++     +....++..+|+.       .++++|+
T Consensus         1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~-------~~~~aDi   73 (142)
T d1o6za1           1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE-------DTAGSDV   73 (142)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG-------GGTTCSE
T ss_pred             CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH-------HhhhcCE
Confidence            3799999999999999999999884  677776432  2211    11     2334454445543       3689999


Q ss_pred             EEEc
Q 022625          167 IICP  170 (294)
Q Consensus       167 Vi~~  170 (294)
                      ||.+
T Consensus        74 Vvit   77 (142)
T d1o6za1          74 VVIT   77 (142)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            9987

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.71  E-value=0.0044  Score=49.99  Aligned_cols=67  Identities=10%  Similarity=-0.031  Sum_probs=49.4

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+.++++.|.|. |.||+.+++.|...|.+|+..++.........        .++....++.++++.+|+|+..
T Consensus        45 ~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~--------~~~~~~~~l~~ll~~sD~i~~~  111 (193)
T d1mx3a1          45 ARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERA--------LGLQRVSTLQDLLFHSDCVTLH  111 (193)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH--------HTCEECSSHHHHHHHCSEEEEC
T ss_pred             eeeeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhh--------hccccccchhhccccCCEEEEe
Confidence            4567899999997 99999999999999999999887654322111        0112223567788889998875

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.70  E-value=0.013  Score=44.93  Aligned_cols=65  Identities=15%  Similarity=0.168  Sum_probs=41.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-C--CeEEEEEcCccchh----hhcC----CCcEEeecCCCCHHHHHHHhcCCcEEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVK-R--TRIKALVKDKRNAM----ESFG----TYVESMAGDASNKKFLKTALRGVRSII  168 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~-g--~~V~~~~R~~~~~~----~~~~----~~v~~v~~D~~d~~~l~~~l~~~d~Vi  168 (294)
                      |+|.|+||+|.+|+.++..|..+ +  .++.+++..+ .+.    +...    .....+ ..-.+    .+.++++|+||
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~-~~~~~----~~~~~~aDvvv   74 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SGEDA----TPALEGADVVL   74 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEE-CSSCC----HHHHTTCSEEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEE-EcCCC----ccccCCCCEEE
Confidence            68999999999999999887643 3  6888887654 221    1111    112222 12222    24688999999


Q ss_pred             Ec
Q 022625          169 CP  170 (294)
Q Consensus       169 ~~  170 (294)
                      .+
T Consensus        75 it   76 (145)
T d2cmda1          75 IS   76 (145)
T ss_dssp             EC
T ss_pred             EC
Confidence            98

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=95.70  E-value=0.037  Score=41.85  Aligned_cols=64  Identities=9%  Similarity=0.011  Sum_probs=45.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccchhhh----------cCCCcEEeecCCCCHHHHHHHhcCCcEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVRSI  167 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~~~~----------~~~~v~~v~~D~~d~~~l~~~l~~~d~V  167 (294)
                      |+|.|+|| |.+|+.++..|+..+  .++.+++++++++...          +....++...  .|    .+.++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~----~~~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--ND----YADTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CC----HHHhcCCeEE
Confidence            68999997 999999999999987  5899999888653211          1123333322  12    1357899999


Q ss_pred             EEc
Q 022625          168 ICP  170 (294)
Q Consensus       168 i~~  170 (294)
                      +.+
T Consensus        74 vit   76 (142)
T d1guza1          74 IIT   76 (142)
T ss_dssp             EEC
T ss_pred             EEE
Confidence            987

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.70  E-value=0.011  Score=43.21  Aligned_cols=37  Identities=16%  Similarity=0.118  Sum_probs=33.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN  135 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~  135 (294)
                      ..++++|.|| |++|-+++..|.+.|.+|+++.|.+.-
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEeccee
Confidence            3489999998 999999999999999999999988753

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.62  E-value=0.0056  Score=49.21  Aligned_cols=37  Identities=11%  Similarity=0.047  Sum_probs=34.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA  136 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~  136 (294)
                      -++|.|.|| |.+|+.++..++.+|++|++++++++.+
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l   40 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDIL   40 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHH
Confidence            479999998 9999999999999999999999998653

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=95.55  E-value=0.039  Score=41.83  Aligned_cols=64  Identities=14%  Similarity=0.064  Sum_probs=43.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhh----------cCCCcEEe-ecCCCCHHHHHHHhcCCcE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES----------FGTYVESM-AGDASNKKFLKTALRGVRS  166 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~----------~~~~v~~v-~~D~~d~~~l~~~l~~~d~  166 (294)
                      +++|.|.|+ |.+|..++..|+.++. ++++++.+++++...          .+....+. ..|+       +.++++|+
T Consensus         1 r~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~-------~~~~~adv   72 (142)
T d1uxja1           1 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-------ADTANSDV   72 (142)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-------GGGTTCSE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH-------HHhcCCCE
Confidence            368999997 9999999999988774 888888877653221          11122222 2233       23788999


Q ss_pred             EEEc
Q 022625          167 IICP  170 (294)
Q Consensus       167 Vi~~  170 (294)
                      ||.+
T Consensus        73 vvit   76 (142)
T d1uxja1          73 IVVT   76 (142)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            9987

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.55  E-value=0.017  Score=45.30  Aligned_cols=96  Identities=13%  Similarity=0.034  Sum_probs=59.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcE-EeecCCCC--HHHHHHHh--cCCcEEEE
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVE-SMAGDASN--KKFLKTAL--RGVRSIIC  169 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~-~v~~D~~d--~~~l~~~l--~~~d~Vi~  169 (294)
                      ..++.+|+|.|+ |.+|...++.+...|. +|+++++++++++....-+.+ ++...-.|  .+...+..  .++|++|.
T Consensus        25 ~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid  103 (174)
T d1p0fa2          25 VTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVE  103 (174)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEE
Confidence            346789999997 9999999999999996 688888888876543322222 22111112  23333333  47899999


Q ss_pred             cCCch--HHhhhh--hcCCCEEEEecc
Q 022625          170 PSEGF--ISNAGS--LKGVQHVILLSQ  192 (294)
Q Consensus       170 ~~~~~--~~~~~~--~~gv~r~V~vSs  192 (294)
                      +.+..  +.+...  ..+-.++|++.-
T Consensus       104 ~~g~~~~~~~~~~~~~~~~G~~v~vG~  130 (174)
T d1p0fa2         104 CAGRIETMMNALQSTYCGSGVTVVLGL  130 (174)
T ss_dssp             CSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred             cCCCchHHHHHHHHHHHhcCceEEEEE
Confidence            85432  333332  233457888764

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=95.54  E-value=0.0081  Score=47.83  Aligned_cols=33  Identities=18%  Similarity=0.190  Sum_probs=27.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEE
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALV  130 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~  130 (294)
                      +..+|.|.||||++|+++++-|.++- +++..+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            45689999999999999999999874 4666664

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=95.54  E-value=0.0025  Score=50.67  Aligned_cols=24  Identities=13%  Similarity=0.151  Sum_probs=21.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVK  122 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~  122 (294)
                      ..+|.||||+|.||+.++..|+..
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g   47 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASG   47 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcC
Confidence            458999999999999999999874

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.49  E-value=0.012  Score=44.08  Aligned_cols=31  Identities=13%  Similarity=0.009  Sum_probs=27.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALV  130 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~  130 (294)
                      |+|.|.|++|..|+.+.+.+.+++++++...
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~i   31 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKV   31 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEE
Confidence            6899999999999999999999999988654

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.44  E-value=0.0013  Score=59.85  Aligned_cols=76  Identities=18%  Similarity=0.171  Sum_probs=51.7

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc-------------------hh---h---hcCC--CcEEe
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------AM---E---SFGT--YVESM  147 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~~---~---~~~~--~v~~v  147 (294)
                      .+.+.+|||.|+ |++|.++++.|+..|. ++.+++.+.=.                   +.   +   ...+  ++..+
T Consensus        34 ~l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~  112 (426)
T d1yovb1          34 LLDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPH  112 (426)
T ss_dssp             HHHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEE
T ss_pred             HHhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEee
Confidence            456789999998 7799999999999997 77777654311                   00   0   0112  34555


Q ss_pred             ecCCCCHHHHHHHhcCCcEEEEcCCch
Q 022625          148 AGDASNKKFLKTALRGVRSIICPSEGF  174 (294)
Q Consensus       148 ~~D~~d~~~l~~~l~~~d~Vi~~~~~~  174 (294)
                      ..++.+..  .+.++++|+||++.+.+
T Consensus       113 ~~~i~~~~--~~~~~~~DlVi~~~Dn~  137 (426)
T d1yovb1         113 FNKIQDFN--DTFYRQFHIIVCGLDSI  137 (426)
T ss_dssp             CSCGGGBC--HHHHTTCSEEEECCSCH
T ss_pred             eccccchH--HHHHHhcchheeccCcH
Confidence            55555432  36789999999985543

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=95.43  E-value=0.0075  Score=46.72  Aligned_cols=68  Identities=18%  Similarity=0.124  Sum_probs=45.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhh----------cCCCcEEeecCCCCHHHHHHHhcCCc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVR  165 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~----------~~~~v~~v~~D~~d~~~l~~~l~~~d  165 (294)
                      .+.++|.|.|| |.+|+.++..|...+. ++++++.+++++...          .........     ....++.++++|
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~-----~~~~~~~~~~ad   78 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-----EYSYEAALTGAD   78 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-----ECSHHHHHTTCS
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec-----cCchhhhhcCCC
Confidence            35689999998 9999999988888774 888888777653221          111111111     112346789999


Q ss_pred             EEEEc
Q 022625          166 SIICP  170 (294)
Q Consensus       166 ~Vi~~  170 (294)
                      +|+.+
T Consensus        79 iVvit   83 (154)
T d1pzga1          79 CVIVT   83 (154)
T ss_dssp             EEEEC
T ss_pred             eEEEe
Confidence            99987

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.43  E-value=0.0066  Score=48.07  Aligned_cols=91  Identities=12%  Similarity=0.016  Sum_probs=52.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEE-cCcc-----chhhhcC-----CCcEEeecCCCCHHHHHHHhcCCcE
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALV-KDKR-----NAMESFG-----TYVESMAGDASNKKFLKTALRGVRS  166 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~-R~~~-----~~~~~~~-----~~v~~v~~D~~d~~~l~~~l~~~d~  166 (294)
                      |++|.|.||||++|+++++-|.++ .+++..+. +...     +.....+     ........  .+   ......++|+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~dv   75 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPM--SD---VRDFSADVDV   75 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEE--SC---GGGTCTTCCE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccc--hh---hhhhhcccce
Confidence            579999999999999999999987 56776654 2211     1111111     01111111  11   1233567899


Q ss_pred             EEEcCCc-h---HHhhhhhcCCCEEEEeccccc
Q 022625          167 IICPSEG-F---ISNAGSLKGVQHVILLSQLSV  195 (294)
Q Consensus       167 Vi~~~~~-~---~~~~~~~~gv~r~V~vSs~~~  195 (294)
                      +|.+.+. .   ........+ .++|-.|+..-
T Consensus        76 vf~alp~~~s~~~~~~~~~~~-~~vIDlSadfR  107 (179)
T d2g17a1          76 VFLATAHEVSHDLAPQFLQAG-CVVFDLSGAFR  107 (179)
T ss_dssp             EEECSCHHHHHHHHHHHHHTT-CEEEECSSTTS
T ss_pred             eeccccchhHHHHhhhhhhcC-ceeeccccccc
Confidence            9998443 2   222333444 46777777543

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.41  E-value=0.036  Score=42.94  Aligned_cols=68  Identities=16%  Similarity=0.178  Sum_probs=46.4

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCccchhh----h-----c-CCCcEEeecCCCCHHHHHHHhc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME----S-----F-GTYVESMAGDASNKKFLKTALR  162 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~~~~~~----~-----~-~~~v~~v~~D~~d~~~l~~~l~  162 (294)
                      ...+..+|.|.|+ |.+|..++..|+.+|.  ++++++++++++..    +     + +........|+       +.++
T Consensus        15 ~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~   86 (159)
T d2ldxa1          15 DKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSA   86 (159)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGT
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------hhhc
Confidence            3445678999996 9999999999999875  89998888765321    1     1 11122222333       3478


Q ss_pred             CCcEEEEc
Q 022625          163 GVRSIICP  170 (294)
Q Consensus       163 ~~d~Vi~~  170 (294)
                      ++|+||.+
T Consensus        87 ~adivvit   94 (159)
T d2ldxa1          87 NSKLVIIT   94 (159)
T ss_dssp             TEEEEEEC
T ss_pred             cccEEEEe
Confidence            89999987

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.32  E-value=0.0069  Score=49.00  Aligned_cols=63  Identities=16%  Similarity=0.035  Sum_probs=47.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      .+.+++|.|.|. |.||+.+++.|...|.+|++.++...+...   ..+.     .   .++.++++.+|+|+..
T Consensus        42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~---~~~~-----~---~~l~~l~~~~D~v~~~  104 (199)
T d1dxya1          42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDH---PDFD-----Y---VSLEDLFKQSDVIDLH  104 (199)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCC---TTCE-----E---CCHHHHHHHCSEEEEC
T ss_pred             cccceeeeeeec-ccccccccccccccceeeeccCCccchhhh---cchh-----H---HHHHHHHHhcccceee
Confidence            456799999996 999999999999999999999886543221   1111     1   2366778889998876

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.32  E-value=0.018  Score=42.30  Aligned_cols=36  Identities=11%  Similarity=-0.016  Sum_probs=32.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR  134 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~  134 (294)
                      ..++++|.|| |+||-+++..|.+.|.+|+++.|...
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            3488999997 99999999999999999999998864

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.31  E-value=0.011  Score=43.51  Aligned_cols=35  Identities=9%  Similarity=0.031  Sum_probs=32.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR  134 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~  134 (294)
                      .++|+|.|| |++|-+++..|.+.|.+|+++.|...
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            589999998 99999999999999999999998764

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.30  E-value=0.0074  Score=48.13  Aligned_cols=65  Identities=20%  Similarity=0.015  Sum_probs=48.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ...++++.|.|. |.||+.+++.|...|.+|+...+...+..... ..++.        .++.++++.+|+|+..
T Consensus        41 ~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~-~~~~~--------~~l~ell~~sDiv~~~  105 (184)
T d1ygya1          41 EIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ-LGIEL--------LSLDDLLARADFISVH  105 (184)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH-HTCEE--------CCHHHHHHHCSEEEEC
T ss_pred             cccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhh-cCcee--------ccHHHHHhhCCEEEEc
Confidence            456899999996 99999999999999999999888765432211 11221        2356788999999876

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.27  E-value=0.041  Score=41.73  Aligned_cols=63  Identities=13%  Similarity=0.192  Sum_probs=44.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCccchhh----h------cCCCcEEee-cCCCCHHHHHHHhcCCcE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----S------FGTYVESMA-GDASNKKFLKTALRGVRS  166 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~~~~~----~------~~~~v~~v~-~D~~d~~~l~~~l~~~d~  166 (294)
                      |+|.|.|+ |.+|..++..|+.+|  .++.+++++++++..    +      .+...++.. .|+       +.++++|+
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-------~~~~~adi   72 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-------SLLKGSEI   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG-------GGGTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH-------HHhccccE
Confidence            68999997 999999999999887  478888888765321    1      112223332 232       35889999


Q ss_pred             EEEc
Q 022625          167 IICP  170 (294)
Q Consensus       167 Vi~~  170 (294)
                      ||.+
T Consensus        73 Vvit   76 (142)
T d1ojua1          73 IVVT   76 (142)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            9987

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.27  E-value=0.016  Score=42.86  Aligned_cols=33  Identities=15%  Similarity=0.064  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD  132 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~  132 (294)
                      .++++|.|| |+||.+++..|.+.|.+|.++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            478999997 999999999999999999999875

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.25  E-value=0.0091  Score=46.54  Aligned_cols=74  Identities=20%  Similarity=0.196  Sum_probs=46.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhh--cCCCcEEeec-C-CCCHHHHHHHh--cCCcEEEE
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES--FGTYVESMAG-D-ASNKKFLKTAL--RGVRSIIC  169 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~~v~~v~~-D-~~d~~~l~~~l--~~~d~Vi~  169 (294)
                      .++.+|+|.|+ |++|...++.+...|. .|++..+++++.+..  ++. .+++.. + -.+.....+..  .++|+||.
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa-~~~i~~~~~~~~~~~~~~~~~~~g~D~vid  104 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA-TECINPQDFSKPIQEVLIEMTDGGVDYSFE  104 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC-SEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCC-cEEEeCCchhhHHHHHHHHHcCCCCcEeee
Confidence            35789999998 6899999999999996 566666666664322  332 122211 1 12233332222  47899999


Q ss_pred             cCC
Q 022625          170 PSE  172 (294)
Q Consensus       170 ~~~  172 (294)
                      +.+
T Consensus       105 ~~G  107 (176)
T d2fzwa2         105 CIG  107 (176)
T ss_dssp             CSC
T ss_pred             cCC
Confidence            854

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.20  E-value=0.016  Score=42.35  Aligned_cols=37  Identities=19%  Similarity=0.112  Sum_probs=33.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN  135 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~  135 (294)
                      ++++++|.|| |+||.+++..|.+.|.+|.++.|.+.-
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~~   57 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEPL   57 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccchh
Confidence            5789999997 999999999999999999999987643

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.19  E-value=0.012  Score=43.42  Aligned_cols=36  Identities=8%  Similarity=0.026  Sum_probs=32.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN  135 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~  135 (294)
                      .++++|.|| |+||-+++..|.+.|.+|.++.|.+.-
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecccc
Confidence            479999997 999999999999999999999987754

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.17  E-value=0.014  Score=42.70  Aligned_cols=36  Identities=11%  Similarity=-0.063  Sum_probs=32.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN  135 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~  135 (294)
                      .++++|.|| |++|.+++..|.+.|.+|.++.|.+.-
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecchh
Confidence            478999997 999999999999999999999887643

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.16  E-value=0.012  Score=43.49  Aligned_cols=34  Identities=15%  Similarity=0.191  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK  133 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~  133 (294)
                      .++++|.|| |++|-+++..|.+.|.+|+++.|.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            478999997 9999999999999999999998875

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.11  E-value=0.013  Score=43.37  Aligned_cols=36  Identities=6%  Similarity=0.076  Sum_probs=32.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN  135 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~  135 (294)
                      .++++|.|| |+||-+++..|.+.|.+|+++.|.+.-
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~~   57 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDKV   57 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecccc
Confidence            479999997 999999999999999999999997643

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.10  E-value=0.018  Score=43.21  Aligned_cols=38  Identities=24%  Similarity=0.257  Sum_probs=34.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA  136 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~  136 (294)
                      ..++|+|.|| |++|-+++..|.+.|.+|.++.+.+.-+
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~l   71 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARVL   71 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccccc
Confidence            4689999997 9999999999999999999999887543

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.05  E-value=0.014  Score=46.72  Aligned_cols=68  Identities=10%  Similarity=-0.023  Sum_probs=49.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ....++++.|.|. |.||+.+++.|...|.+|+..++............       ....+++.++++.+|+|+..
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~-------~~~~~~l~~ll~~sD~v~l~  110 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQ-------ATFHDSLDSLLSVSQFFSLN  110 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHT-------CEECSSHHHHHHHCSEEEEC
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhccc-------ccccCCHHHHHhhCCeEEec
Confidence            4557899999997 99999999999999999999887654322111100       11123467889999998865

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.00  E-value=0.017  Score=45.97  Aligned_cols=68  Identities=7%  Similarity=-0.097  Sum_probs=48.9

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ..+.++++.|.|. |.||+.+++.|...|.+|....+...........+       +....++.+.++.+|+|+..
T Consensus        40 ~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~-------~~~~~~l~~~l~~sD~v~~~  107 (188)
T d2naca1          40 YDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELN-------LTWHATREDMYPVCDVVTLN  107 (188)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHT-------CEECSSHHHHGGGCSEEEEC
T ss_pred             eeccccceeeccc-cccchhhhhhhhccCceEEEEeecccccccccccc-------ccccCCHHHHHHhccchhhc
Confidence            3456899999996 99999999999999999999988654322111111       11224456788999999875

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.97  E-value=0.11  Score=42.59  Aligned_cols=93  Identities=11%  Similarity=0.043  Sum_probs=60.4

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCcc---ch-------------------hh---hcCCCcEEeec
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---NA-------------------ME---SFGTYVESMAG  149 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~---~~-------------------~~---~~~~~v~~v~~  149 (294)
                      .+..++|+|.|+ |++|++++..|+..|. ++++++.+.-   .+                   .+   ...+.+++...
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~  105 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  105 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence            456789999997 8999999999999998 5555554321   10                   00   11233444433


Q ss_pred             CC-CCHHHHHHHhcCCcEEEEcCCch-----HHhhhhhcCCCEEEEe
Q 022625          150 DA-SNKKFLKTALRGVRSIICPSEGF-----ISNAGSLKGVQHVILL  190 (294)
Q Consensus       150 D~-~d~~~l~~~l~~~d~Vi~~~~~~-----~~~~~~~~gv~r~V~v  190 (294)
                      +. -+.......+..+|++|.+.+.+     +.+.+.+.++. +|+.
T Consensus       106 ~~~~~~~~~~~~~~~~divid~~d~~~~~~~in~~~~~~~ip-~i~g  151 (247)
T d1jw9b_         106 NALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVP-LVSG  151 (247)
T ss_dssp             CSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCC-EEEE
T ss_pred             hhhhhhccccccccccceeeeccchhhhhhhHHHHHHHhCCC-cccc
Confidence            32 24566677888999999986543     55567777765 4444

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.95  E-value=0.026  Score=44.65  Aligned_cols=40  Identities=8%  Similarity=0.200  Sum_probs=35.4

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR  134 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~  134 (294)
                      ......|+|+|.|| |..|.+.+..|.++||+|+++.+++.
T Consensus        38 ~~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          38 LPAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CSCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            34556799999997 99999999999999999999998764

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.86  E-value=0.0087  Score=47.72  Aligned_cols=38  Identities=13%  Similarity=-0.004  Sum_probs=34.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchh
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM  137 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~  137 (294)
                      -++|.|.|| |.+|+.++..++..|++|++++++++.+.
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~   41 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIE   41 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHh
Confidence            478999998 99999999999999999999999987543

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.85  E-value=0.019  Score=41.70  Aligned_cols=36  Identities=14%  Similarity=0.180  Sum_probs=32.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN  135 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~  135 (294)
                      .++++|.|| |++|-+++..|.+.|.+|.++.|.+.-
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeeccc
Confidence            478999997 999999999999999999999887643

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.82  E-value=0.024  Score=38.56  Aligned_cols=37  Identities=16%  Similarity=0.073  Sum_probs=32.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA  136 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~  136 (294)
                      +|+|.|.|+ |.+|+.++..-...|+++++++-+++..
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~p   37 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEPA   37 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCCc
Confidence            479999997 9999999999999999999998776543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=94.81  E-value=0.022  Score=46.07  Aligned_cols=35  Identities=26%  Similarity=0.282  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK  133 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~  133 (294)
                      ..++|+|.|| |..|...+..|.++|++|.++.|+.
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4578999998 9999999999999999999999864

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.77  E-value=0.042  Score=43.57  Aligned_cols=72  Identities=13%  Similarity=-0.062  Sum_probs=52.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCC----------------------CCHH
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA----------------------SNKK  155 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~----------------------~d~~  155 (294)
                      +.-+|+|.|| |-.|.+-++.....|..|.+++.+++++.+.....-+++..+.                      ...+
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            3469999998 9999999999999999999999988765544322223322211                      1235


Q ss_pred             HHHHHhcCCcEEEEc
Q 022625          156 FLKTALRGVRSIICP  170 (294)
Q Consensus       156 ~l~~~l~~~d~Vi~~  170 (294)
                      .+.+.++.+|.||.+
T Consensus       107 ~l~~~l~~aDlVI~t  121 (183)
T d1l7da1         107 AVLKELVKTDIAITT  121 (183)
T ss_dssp             HHHHHHTTCSEEEEC
T ss_pred             HHHHHHHhhhhheee
Confidence            677788999999987

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=94.76  E-value=0.1  Score=39.53  Aligned_cols=64  Identities=13%  Similarity=0.125  Sum_probs=44.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCccchhhh---------cCCCcEEeecCCCCHHHHHHHhcCCcEEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMES---------FGTYVESMAGDASNKKFLKTALRGVRSII  168 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~~~~~~~---------~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi  168 (294)
                      .+|.|.|+ |.+|+.++..|+.++.  ++++++++++++...         +.....+...+  +    .+.++++|+||
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~----~~~~~daDvVV   74 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--D----PEICRDADMVV   74 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--C----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--C----HHHhhCCcEEE
Confidence            57899997 9999999999999885  899988887653211         11122222221  2    13478899999


Q ss_pred             Ec
Q 022625          169 CP  170 (294)
Q Consensus       169 ~~  170 (294)
                      .+
T Consensus        75 it   76 (143)
T d1llda1          75 IT   76 (143)
T ss_dssp             EC
T ss_pred             Ee
Confidence            98

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.66  E-value=0.013  Score=45.91  Aligned_cols=69  Identities=12%  Similarity=0.090  Sum_probs=48.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCC----C-cEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT----Y-VESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~----~-v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      |+|.|.|- |.+|..+++.|++.||+|.+.+|++++.......    . ..... ...+.+.+...+...+.++.+
T Consensus         2 MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   75 (178)
T d1pgja2           2 MDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLK-AFETMEAFAASLKKPRKALIL   75 (178)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEE-ECSCHHHHHHHBCSSCEEEEC
T ss_pred             CEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchh-hhhhhhHHHHhcccceEEEEe
Confidence            67999995 9999999999999999999999999876544211    1 11111 133455666666666666555

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.66  E-value=0.016  Score=44.14  Aligned_cols=37  Identities=14%  Similarity=0.327  Sum_probs=33.2

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD  132 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~  132 (294)
                      ..+.+|+|||.|| |.+|..-++.|++.|.+|+++...
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3567899999998 999999999999999999999654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.57  E-value=0.019  Score=44.86  Aligned_cols=36  Identities=8%  Similarity=-0.062  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCcc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR  134 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~  134 (294)
                      .+++|+|.|| |..|...+.+|.++|+ +|+++.|...
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            3689999998 9999999999999998 5999888764

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.57  E-value=0.015  Score=45.71  Aligned_cols=41  Identities=10%  Similarity=0.111  Sum_probs=35.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhh
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME  138 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~  138 (294)
                      ...+|+|+|.|+ |+.++.++..|.+.| +|.++.|+.+++..
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~   55 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEA   55 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHH
Confidence            356899999997 889999999998777 99999999887654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.55  E-value=0.063  Score=42.72  Aligned_cols=74  Identities=9%  Similarity=-0.017  Sum_probs=48.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCcEEeecCC-CC-HHHHHHHhc--CCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDA-SN-KKFLKTALR--GVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v~~v~~D~-~d-~~~l~~~l~--~~d~Vi~~~  171 (294)
                      .++.+|+|.|| |.+|...+..+...|. +|++++++++++.....-+...+.-.. .+ .+.+.+...  ++|++|.+.
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~i~~~t~g~g~D~vid~v  102 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAV  102 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCCcCHHHHHHHHhCCCCcEEEEECc
Confidence            35789999997 9999888888877787 777788888775543333344433211 22 244555544  579999873

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.43  E-value=0.021  Score=45.47  Aligned_cols=63  Identities=8%  Similarity=-0.022  Sum_probs=47.2

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      .+.+++|.|.|. |.||+.+++.|...|.+|+..++.......    ...  .  +   +.++++++.+|+|+..
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~----~~~--~--~---~~l~ell~~sDii~i~  103 (188)
T d1sc6a1          41 EARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLG----NAT--Q--V---QHLSDLLNMSDVVSLH  103 (188)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCT----TCE--E--C---SCHHHHHHHCSEEEEC
T ss_pred             cccceEEEEeec-ccchhhhhhhcccccceEeeccccccchhh----hhh--h--h---hhHHHHHhhccceeec
Confidence            456899999996 999999999999999999999876432211    111  1  1   2466788889999876

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.38  E-value=0.0035  Score=48.58  Aligned_cols=25  Identities=20%  Similarity=0.276  Sum_probs=22.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR  123 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g  123 (294)
                      .++|.|+||+|++|+.++..|+..+
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcc
Confidence            4699999999999999999998765

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.31  E-value=0.022  Score=42.02  Aligned_cols=38  Identities=8%  Similarity=-0.059  Sum_probs=34.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA  136 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~  136 (294)
                      ..++++|.|| |+||-+++..|.+.|.+|+++.|++.-+
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~l   61 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEIV   61 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccccC
Confidence            4589999997 9999999999999999999999987653

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.22  E-value=0.024  Score=46.24  Aligned_cols=34  Identities=12%  Similarity=0.125  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK  133 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~  133 (294)
                      +|+|+|.|| |.-|...+.+|.++|++|+++-+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            589999997 9999999999999999999998765

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=94.21  E-value=0.053  Score=40.13  Aligned_cols=92  Identities=3%  Similarity=-0.070  Sum_probs=58.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHH-HCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc-CCcEEEEcCCc----
Q 022625          100 DAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSIICPSEG----  173 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~-~~d~Vi~~~~~----  173 (294)
                      .+|+|.|| |.+|+.+++++. ..+++++++..+..+.....=.++.++..  .   .+.+..+ ..+.++.+.+.    
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I~Gi~V~~~--~---~l~~~~~~~i~iai~~i~~~~~~   77 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRPVRGGVIEHV--D---LLPQRVPGRIEIALLTVPREAAQ   77 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEETTEEEEEG--G---GHHHHSTTTCCEEEECSCHHHHH
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEECCEEEecH--H---HHHHHHhhcccEEEEeCCHHHHH
Confidence            48999998 999999999875 35789999877554322111135665532  2   3444443 45666665332    


Q ss_pred             hHHhhhhhcCCCEEEEeccccccc
Q 022625          174 FISNAGSLKGVQHVILLSQLSVYR  197 (294)
Q Consensus       174 ~~~~~~~~~gv~r~V~vSs~~~~~  197 (294)
                      .+.+.+.+.|++.+..++......
T Consensus        78 ~I~d~l~~~gIk~I~~f~~~~l~~  101 (126)
T d2dt5a2          78 KAADLLVAAGIKGILNFAPVVLEV  101 (126)
T ss_dssp             HHHHHHHHHTCCEEEECSSSCCCC
T ss_pred             HHHHHHHHcCCCEEeecCceeecC
Confidence            256667888999988887665443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.14  E-value=0.042  Score=41.41  Aligned_cols=30  Identities=13%  Similarity=0.204  Sum_probs=25.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC-CCeEEEEE
Q 022625          101 AVLVTDGDSDIGQMVILSLIVK-RTRIKALV  130 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~  130 (294)
                      ||.|.||+|..|+.+++.+.+. ++++.+..
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~   31 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAEL   31 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            6899999999999999988764 57877654

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.10  E-value=0.12  Score=35.79  Aligned_cols=80  Identities=8%  Similarity=-0.021  Sum_probs=52.4

Q ss_pred             CCeEEEEcCCChHHH-HHHHHHHHCCCeEEEEEcCccchhh-hcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcC----C
Q 022625           99 RDAVLVTDGDSDIGQ-MVILSLIVKRTRIKALVKDKRNAME-SFGTYVESMAGDASNKKFLKTALRGVRSIICPS----E  172 (294)
Q Consensus        99 ~~~vlVtGatG~IG~-~l~~~L~~~g~~V~~~~R~~~~~~~-~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~----~  172 (294)
                      .|+|-+.|- |++|. .|++.|.++|+.|.+-++......+ +...++++..+.-.  +    -+++.|.||+.+    .
T Consensus         1 ~~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~--~----~i~~~d~vV~SsAI~~~   73 (89)
T d1j6ua1           1 HMKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSA--D----NWYDPDLVIKTPAVRDD   73 (89)
T ss_dssp             CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCT--T----SCCCCSEEEECTTCCTT
T ss_pred             CcEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeecc--c----ccCCCCEEEEecCcCCC
Confidence            367888887 56776 7889999999999999988654332 23346666554221  1    136789998872    2


Q ss_pred             chHHhhhhhcCCC
Q 022625          173 GFISNAGSLKGVQ  185 (294)
Q Consensus       173 ~~~~~~~~~~gv~  185 (294)
                      .-....+++.|++
T Consensus        74 npel~~A~~~gIp   86 (89)
T d1j6ua1          74 NPEIVRARMERVP   86 (89)
T ss_dssp             CHHHHHHHHTTCC
T ss_pred             CHHHHHHHHcCCC
Confidence            2244556776664

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=94.10  E-value=0.027  Score=42.91  Aligned_cols=35  Identities=14%  Similarity=0.191  Sum_probs=29.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEEcCc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDK  133 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~R~~  133 (294)
                      .+|+|+|.|| |++|-+++..|.+.++  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3799999998 9999999999999875  677776655

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=94.10  E-value=0.026  Score=43.39  Aligned_cols=90  Identities=18%  Similarity=0.141  Sum_probs=48.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC---eEEEEEcCccchhhhcCCCc-EEeecCCCCHHHHHHHhcCCcEEEEcCCc-h
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYV-ESMAGDASNKKFLKTALRGVRSIICPSEG-F  174 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~v-~~v~~D~~d~~~l~~~l~~~d~Vi~~~~~-~  174 (294)
                      -+|.|.||||++|.++++.|.++.+   ++..+. +.+..-....... .....+..+     ..+.++|.++.+.+. .
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~-s~~s~G~~~~~~~~~~~~~~~~~-----~~~~~~d~~f~~~~~~~   75 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA-SARSAGKSLKFKDQDITIEETTE-----TAFEGVDIALFSAGSST   75 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE-CGGGTTCEEEETTEEEEEEECCT-----TTTTTCSEEEECSCHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEec-ccccccccccccCCcccccccch-----hhhhhhhhhhhccCccc
Confidence            4799999999999999999988864   333333 2222111111111 111112222     234577888888432 2


Q ss_pred             ---HHhhhhhcCCCEEEEecccccc
Q 022625          175 ---ISNAGSLKGVQHVILLSQLSVY  196 (294)
Q Consensus       175 ---~~~~~~~~gv~r~V~vSs~~~~  196 (294)
                         ........| .++|=.|++.-.
T Consensus        76 s~~~~~~~~~~~-~~VIDlSsdfR~   99 (154)
T d2gz1a1          76 SAKYAPYAVKAG-VVVVDNTSYFRQ   99 (154)
T ss_dssp             HHHHHHHHHHTT-CEEEECSSTTTT
T ss_pred             hhhHHhhhcccc-ceehhcChhhhc
Confidence               222233344 366677776443

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.05  E-value=0.036  Score=41.02  Aligned_cols=37  Identities=14%  Similarity=0.083  Sum_probs=33.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN  135 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~  135 (294)
                      ..++++|.|| |+||-+++..|.+.|.+|+++.+.+.-
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~i   61 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDGL   61 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence            3589999997 999999999999999999999987643

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=94.02  E-value=0.085  Score=40.72  Aligned_cols=93  Identities=13%  Similarity=0.071  Sum_probs=55.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCC-CcEEeecCCCCHHHHHHHh--cCCcEEEEcCCc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTAL--RGVRSIICPSEG  173 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l--~~~d~Vi~~~~~  173 (294)
                      ++.+|+|.|+ |.+|...++.+...|. .|++..+++++......- ..+++.-+-.+.+.+.+..  +++|+||.+.++
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~  110 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGS  110 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecCc
Confidence            5789999996 9999999998888886 666667777665433222 2233332222233344433  357999998553


Q ss_pred             h--HHhhhhhc-CCCEEEEec
Q 022625          174 F--ISNAGSLK-GVQHVILLS  191 (294)
Q Consensus       174 ~--~~~~~~~~-gv~r~V~vS  191 (294)
                      .  +..+.... .-.++|+++
T Consensus       111 ~~~~~~a~~~l~~~G~iv~~G  131 (172)
T d1h2ba2         111 QATVDYTPYLLGRMGRLIIVG  131 (172)
T ss_dssp             HHHHHHGGGGEEEEEEEEECC
T ss_pred             chHHHHHHHHHhCCCEEEEEe
Confidence            2  33222211 125788776

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.02  E-value=0.034  Score=45.28  Aligned_cols=36  Identities=19%  Similarity=0.208  Sum_probs=32.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR  134 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~  134 (294)
                      ..++|+|.|| |..|..++..|.++|++|+++.|+++
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4689999998 99999999999999999999988764

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.00  E-value=0.083  Score=40.95  Aligned_cols=94  Identities=9%  Similarity=0.091  Sum_probs=55.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-EcCccchhhh--cCCCcEEeecCCCCH-HHHHHHhc-CCcEEEEcC
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES--FGTYVESMAGDASNK-KFLKTALR-GVRSIICPS  171 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~-~R~~~~~~~~--~~~~v~~v~~D~~d~-~~l~~~l~-~~d~Vi~~~  171 (294)
                      .++.+|+|.|+ |.+|...++.+...|.+++.+ .+++++....  ++. .+++.-+-.|. +.+++... ++|+||.+.
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga-~~~i~~~~~~~~~~i~~~t~gg~D~vid~~  104 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-THVINSKTQDPVAAIKEITDGGVNFALEST  104 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-SEEEETTTSCHHHHHHHHTTSCEEEEEECS
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCC-eEEEeCCCcCHHHHHHHHcCCCCcEEEEcC
Confidence            35789999997 999999998888888866554 5566554422  321 23333222232 33444433 589999885


Q ss_pred             Cc--hHHhhhhhc-CCCEEEEecc
Q 022625          172 EG--FISNAGSLK-GVQHVILLSQ  192 (294)
Q Consensus       172 ~~--~~~~~~~~~-gv~r~V~vSs  192 (294)
                      +.  .+..+.+.. .-.++++++.
T Consensus       105 G~~~~~~~~~~~~~~~G~i~~~G~  128 (174)
T d1f8fa2         105 GSPEILKQGVDALGILGKIAVVGA  128 (174)
T ss_dssp             CCHHHHHHHHHTEEEEEEEEECCC
T ss_pred             CcHHHHHHHHhcccCceEEEEEee
Confidence            43  233322211 1247888764

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.90  E-value=0.14  Score=35.82  Aligned_cols=81  Identities=10%  Similarity=0.023  Sum_probs=53.2

Q ss_pred             CCCeEEEEcCCChHH-HHHHHHHHHCCCeEEEEEcCccchh-hhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC---
Q 022625           98 ARDAVLVTDGDSDIG-QMVILSLIVKRTRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE---  172 (294)
Q Consensus        98 ~~~~vlVtGatG~IG-~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~---  172 (294)
                      ..++|.+.|- |++| +.||+.|.++|++|.+-++...... .+...++.+..++-.+      .+++.|.||..++   
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~------~i~~~d~vV~S~AI~~   79 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEE------HIEGASVVVVSSAIKD   79 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGG------GGTTCSEEEECTTSCT
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCccc------cCCCCCEEEECCCcCC
Confidence            4689999997 5577 6679999999999999988754322 2223467666554322      2467888888721   


Q ss_pred             -chHHhhhhhcCCC
Q 022625          173 -GFISNAGSLKGVQ  185 (294)
Q Consensus       173 -~~~~~~~~~~gv~  185 (294)
                       .-....|++.|++
T Consensus        80 ~npel~~A~~~gip   93 (96)
T d1p3da1          80 DNPELVTSKQKRIP   93 (96)
T ss_dssp             TCHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHcCCC
Confidence             2233445666654

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=93.87  E-value=0.34  Score=36.95  Aligned_cols=76  Identities=13%  Similarity=0.022  Sum_probs=49.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccchhhhcCCCc-EEeec-CCC-CHHHHHHHh--cCCcEEEEc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYV-ESMAG-DAS-NKKFLKTAL--RGVRSIICP  170 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~v-~~v~~-D~~-d~~~l~~~l--~~~d~Vi~~  170 (294)
                      .++.+|+|.|+ |.+|...+.++...|. +|+++++++++++....-+. +++.- +-. ....+.+..  .++|++|.+
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~  105 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC  105 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceeeee
Confidence            46789999997 7789888888888876 68888888887654433233 22221 111 123444433  478999998


Q ss_pred             CCc
Q 022625          171 SEG  173 (294)
Q Consensus       171 ~~~  173 (294)
                      .++
T Consensus       106 ~G~  108 (175)
T d1cdoa2         106 VGN  108 (175)
T ss_dssp             SCC
T ss_pred             cCC
Confidence            543

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=93.83  E-value=0.035  Score=44.76  Aligned_cols=81  Identities=10%  Similarity=0.000  Sum_probs=53.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHh-cCCcEEEEc-CCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-RGVRSIICP-SEG  173 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l-~~~d~Vi~~-~~~  173 (294)
                      .+.+++|+|-|- |.+|+.+++.|.+.|.+|++.+.+..........+.+.+.     .+   +++ ..||+++=+ .++
T Consensus        24 ~L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~~-----~~---~~~~~~~DI~iPcA~~~   94 (201)
T d1c1da1          24 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVA-----LE---DVLSTPCDVFAPCAMGG   94 (201)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECC-----GG---GGGGCCCSEEEECSCSC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhcccccC-----cc---ccccccceeeecccccc
Confidence            456899999995 9999999999999999999888877665443322333321     11   234 378988866 333


Q ss_pred             h-HHhhhhhcCCC
Q 022625          174 F-ISNAGSLKGVQ  185 (294)
Q Consensus       174 ~-~~~~~~~~gv~  185 (294)
                      . -.+.+.+.+++
T Consensus        95 ~I~~~~a~~i~ak  107 (201)
T d1c1da1          95 VITTEVARTLDCS  107 (201)
T ss_dssp             CBCHHHHHHCCCS
T ss_pred             cccHHHHhhhhhh
Confidence            2 22334445554

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.82  E-value=0.09  Score=41.11  Aligned_cols=77  Identities=10%  Similarity=0.080  Sum_probs=53.1

Q ss_pred             CCcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcE---EeecCC--CCHHHHHHHhcCCcEEE
Q 022625           94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVE---SMAGDA--SNKKFLKTALRGVRSII  168 (294)
Q Consensus        94 ~~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~---~v~~D~--~d~~~l~~~l~~~d~Vi  168 (294)
                      ...+.||+++|.|.+.-+|+-++..|+++|..|..+..+....... ...+.   ....|+  ...+.+++....+|+||
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvI  102 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTR-GESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVI  102 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEES-CCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccccc-ccceeeeeeccccccccchhHHhhccccCCEEE
Confidence            3467899999999999999999999999999998765443221100 00011   111122  34677888899999999


Q ss_pred             EcC
Q 022625          169 CPS  171 (294)
Q Consensus       169 ~~~  171 (294)
                      .+.
T Consensus       103 sav  105 (171)
T d1edza1         103 TGV  105 (171)
T ss_dssp             ECC
T ss_pred             Ecc
Confidence            883

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.74  E-value=0.051  Score=41.25  Aligned_cols=41  Identities=5%  Similarity=-0.001  Sum_probs=32.9

Q ss_pred             cCCCCeEEEE-cCCChHHHHHHHHHHHCCCeEEEEEcCccch
Q 022625           96 EEARDAVLVT-DGDSDIGQMVILSLIVKRTRIKALVKDKRNA  136 (294)
Q Consensus        96 ~~~~~~vlVt-GatG~IG~~l~~~L~~~g~~V~~~~R~~~~~  136 (294)
                      ...++.++|. .+.|+||.+++..|+++|.+|.++.+.+.-+
T Consensus        36 ~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~   77 (156)
T d1djqa2          36 KKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLAN   77 (156)
T ss_dssp             SCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTT
T ss_pred             cccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCccc
Confidence            4456777776 2349999999999999999999999976443

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.59  E-value=0.06  Score=43.68  Aligned_cols=39  Identities=13%  Similarity=0.195  Sum_probs=34.5

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR  134 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~  134 (294)
                      .....++|+|.|| |..|...+.+|.++|++|+++.++..
T Consensus        45 ~~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          45 QTKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             CCSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            3456799999997 99999999999999999999987664

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=93.48  E-value=0.049  Score=42.26  Aligned_cols=34  Identities=9%  Similarity=0.134  Sum_probs=26.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDK  133 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~  133 (294)
                      ..+|.|.|. |.+|+..++.|.+. ++++++++...
T Consensus         3 kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~   37 (170)
T d1f06a1           3 NIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRR   37 (170)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESS
T ss_pred             cceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEecc
Confidence            468999996 99999999999875 57888765433

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.38  E-value=0.039  Score=45.43  Aligned_cols=31  Identities=16%  Similarity=0.218  Sum_probs=29.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK  133 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~  133 (294)
                      |+|.|| |.+|..++.+|+++|++|+++.++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899997 9999999999999999999999864

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.22  E-value=0.063  Score=39.93  Aligned_cols=85  Identities=13%  Similarity=0.118  Sum_probs=55.7

Q ss_pred             CCCCeEEEEcCC---ChHHHHHHHHHHHCC-CeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC
Q 022625           97 EARDAVLVTDGD---SDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE  172 (294)
Q Consensus        97 ~~~~~vlVtGat---G~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~  172 (294)
                      ...++|.|.|||   +..|..+.+.|.+.| ++|+.+..+.+..   .  ++..+ -++.|      +-..+|.++.+.+
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i---~--G~~~y-~sl~d------lp~~vDlvvi~vp   73 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV---Q--GVKAY-KSVKD------IPDEIDLAIIVVP   73 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE---T--TEECB-SSTTS------CSSCCSEEEECSC
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc---C--CeEee-cchhh------cCCCCceEEEecC
Confidence            356899999998   999999999998766 6888776544322   1  12211 13333      1235788888733


Q ss_pred             -ch---HHhhhhhcCCCEEEEeccc
Q 022625          173 -GF---ISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       173 -~~---~~~~~~~~gv~r~V~vSs~  193 (294)
                       ..   +.+.+.+.|++.++.+|+-
T Consensus        74 ~~~~~~~~~~~~~~g~~~~vi~s~G   98 (129)
T d2csua1          74 KRFVKDTLIQCGEKGVKGVVIITAG   98 (129)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEECCCS
T ss_pred             hHHhHHHHHHHHHcCCCEEEEeccc
Confidence             22   3344567899999988864

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.10  E-value=0.058  Score=41.29  Aligned_cols=25  Identities=24%  Similarity=0.170  Sum_probs=22.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR  123 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g  123 (294)
                      .++|.|+||+|.+|+.++..|+..+
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTT
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHH
Confidence            3699999999999999999998654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=93.02  E-value=0.019  Score=44.72  Aligned_cols=87  Identities=9%  Similarity=0.035  Sum_probs=47.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEEcCc-cch-hhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC-ch
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDK-RNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-GF  174 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~-g~~V~~~~R~~-~~~-~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~-~~  174 (294)
                      ..+|+|.||+|..|+.+++.+.+. +.++++....+ ... ....+.-......++.-...+...++.+|++|-.+. ..
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs~p~~   83 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEG   83 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccceEEEeccHHH
Confidence            478999999999999999999875 67776654332 211 000000000000011111122345677898887732 21


Q ss_pred             ---HHhhhhhcCCC
Q 022625          175 ---ISNAGSLKGVQ  185 (294)
Q Consensus       175 ---~~~~~~~~gv~  185 (294)
                         ..+.+.+.++.
T Consensus        84 ~~~~~~~a~~~~~~   97 (162)
T d1diha1          84 TLNHLAFCRQHGKG   97 (162)
T ss_dssp             HHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHhccce
Confidence               44556666654

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.98  E-value=0.072  Score=41.94  Aligned_cols=93  Identities=11%  Similarity=0.049  Sum_probs=53.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccchhh--h--cCCCcE--------EeecCCCCHHHHHHHhcCCcE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAME--S--FGTYVE--------SMAGDASNKKFLKTALRGVRS  166 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~~~--~--~~~~v~--------~v~~D~~d~~~l~~~l~~~d~  166 (294)
                      -+|.|-| -|.||+.+++.|.++. .+|+++.........  .  ......        +-...+.-...+...+.++|+
T Consensus         2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDi   80 (178)
T d1b7go1           2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDI   80 (178)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSE
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCE
Confidence            4799999 5999999999999874 688888654322111  1  110000        000111111234455678999


Q ss_pred             EEEcCCchH----HhhhhhcCCCEEEEecccc
Q 022625          167 IICPSEGFI----SNAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       167 Vi~~~~~~~----~~~~~~~gv~r~V~vSs~~  194 (294)
                      |+-+++.+.    +....+.| +++|+.++..
T Consensus        81 ViecTG~f~~~e~a~~hl~~G-~KvIi~~~~~  111 (178)
T d1b7go1          81 VVDTTPNGVGAQYKPIYLQLQ-RNAIFQGGEK  111 (178)
T ss_dssp             EEECCSTTHHHHHHHHHHHTT-CEEEECTTSC
T ss_pred             EEECCCCcCCHHHHHHHHHcC-CEEEEECCCC
Confidence            999977652    22233456 5777765543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.86  E-value=0.064  Score=45.82  Aligned_cols=35  Identities=11%  Similarity=0.185  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR  134 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~  134 (294)
                      +|+|+|.|| |.-|...|..|.++|++|.++-++..
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            689999997 99999999999999999999987663

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.81  E-value=0.16  Score=39.61  Aligned_cols=94  Identities=19%  Similarity=0.148  Sum_probs=56.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccc--hhhhcCCCcEEeecCCC-----------CHHHHHHHhcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN--AMESFGTYVESMAGDAS-----------NKKFLKTALRGV  164 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~--~~~~~~~~v~~v~~D~~-----------d~~~l~~~l~~~  164 (294)
                      .++|.|-|- |.||+.+++.|..+. .+|+++..-...  ...+...++..+..+..           ....+..++.++
T Consensus         2 ~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v   80 (172)
T d2czca2           2 KVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKV   80 (172)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred             cEEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccC
Confidence            468999996 999999999998764 688877653221  11111111222222211           112344556789


Q ss_pred             cEEEEcCCchHH----hhhhhcCCCEEEEecccc
Q 022625          165 RSIICPSEGFIS----NAGSLKGVQHVILLSQLS  194 (294)
Q Consensus       165 d~Vi~~~~~~~~----~~~~~~gv~r~V~vSs~~  194 (294)
                      |+|+-+++.|..    ..-.++|+ +.|++|...
T Consensus        81 DvViEcTG~f~~~~~~~~hl~~G~-k~Vi~s~~~  113 (172)
T d2czca2          81 DIIVDATPGGIGAKNKPLYEKAGV-KAIFQGGEK  113 (172)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHHTC-EEEECTTSC
T ss_pred             CEEEECCCCCCCHHHHHHHHHcCC-CEEEECCCC
Confidence            999999887642    22235686 566666543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=92.72  E-value=0.071  Score=41.95  Aligned_cols=96  Identities=10%  Similarity=0.131  Sum_probs=56.5

Q ss_pred             CCCeEEE-EcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh------cCCCcEEee---cCCCCH-HHHHHHh----c
Q 022625           98 ARDAVLV-TDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMA---GDASNK-KFLKTAL----R  162 (294)
Q Consensus        98 ~~~~vlV-tGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~v~~v~---~D~~d~-~~l~~~l----~  162 (294)
                      ++.+++| +||+|.+|...++-....|.+|++++|+.++.++.      ++. -+++.   .|..+. +.+.+..    .
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGa-d~vi~~~~~~~~~~~~~v~~~~~~~g~  106 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA-TQVITEDQNNSREFGPTIKEWIKQSGG  106 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC-SEEEEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccc-cEEEeccccchhHHHHHHHHHHhhccC
Confidence            4566666 69999999999988888999999999887653321      221 11221   122221 2233332    4


Q ss_pred             CCcEEEEcCCch-HHhhhhh-cCCCEEEEecccc
Q 022625          163 GVRSIICPSEGF-ISNAGSL-KGVQHVILLSQLS  194 (294)
Q Consensus       163 ~~d~Vi~~~~~~-~~~~~~~-~gv~r~V~vSs~~  194 (294)
                      ++|++|.+.++. +...... ..-.++|.+....
T Consensus       107 ~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~  140 (189)
T d1gu7a2         107 EAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMS  140 (189)
T ss_dssp             CEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCS
T ss_pred             CceEEEECCCcchhhhhhhhhcCCcEEEEECCcc
Confidence            689999985443 2222211 1235888876543

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.57  E-value=0.11  Score=39.15  Aligned_cols=83  Identities=7%  Similarity=0.059  Sum_probs=52.8

Q ss_pred             CCCeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC-c
Q 022625           98 ARDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-G  173 (294)
Q Consensus        98 ~~~~vlVtGat---G~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~-~  173 (294)
                      +.++|.|.||+   +..|..+++.|.+.||+|+.+.......   .+  ..++    .+   +.++-..+|.++.+.. .
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i---~G--~~~~----~s---l~dlp~~iD~v~i~vp~~   85 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV---LG--RKCY----PS---VLDIPDKIEVVDLFVKPK   85 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE---TT--EECB----SS---GGGCSSCCSEEEECSCHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccccc---CC--Cccc----cc---ccccCccceEEEEEeCHH
Confidence            56899999998   7899999999999999988776443221   11  1211    11   2222345688887732 2


Q ss_pred             h---HHhhhhhcCCCEEEEecc
Q 022625          174 F---ISNAGSLKGVQHVILLSQ  192 (294)
Q Consensus       174 ~---~~~~~~~~gv~r~V~vSs  192 (294)
                      .   +.+.+.+.|++.+++.+.
T Consensus        86 ~~~~~~~e~~~~g~k~v~~~~G  107 (139)
T d2d59a1          86 LTMEYVEQAIKKGAKVVWFQYN  107 (139)
T ss_dssp             HHHHHHHHHHHHTCSEEEECTT
T ss_pred             HHHHHHHHHHHhCCCEEEEecc
Confidence            2   333445678887766443

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=92.55  E-value=0.053  Score=44.04  Aligned_cols=34  Identities=26%  Similarity=0.163  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR  134 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~  134 (294)
                      |+|+|.|| |..|...+.+|.++|++|+++-++..
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~   34 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSAR   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            67999998 99999999999999999999987653

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.52  E-value=0.12  Score=37.48  Aligned_cols=79  Identities=8%  Similarity=0.165  Sum_probs=50.2

Q ss_pred             CeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC-ch-
Q 022625          100 DAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-GF-  174 (294)
Q Consensus       100 ~~vlVtGat---G~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~-~~-  174 (294)
                      |+|.|.||+   +..|..+.+.|++.||+|+.+..+.+..   .  ++..+       .++.++-...|.++.+.+ .. 
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i---~--G~~~y-------~sl~~lp~~~D~vvi~vp~~~~   69 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI---E--GLKCY-------RSVRELPKDVDVIVFVVPPKVG   69 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE---T--TEECB-------SSGGGSCTTCCEEEECSCHHHH
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccc---c--Ccccc-------ccchhccccceEEEEEeCHHHH
Confidence            789999988   6799999999999999988775443221   1  12222       112223335688887733 22 


Q ss_pred             --HHhhhhhcCCCEEEEe
Q 022625          175 --ISNAGSLKGVQHVILL  190 (294)
Q Consensus       175 --~~~~~~~~gv~r~V~v  190 (294)
                        +.+.+.+.|++.+++-
T Consensus        70 ~~~l~~~~~~g~k~v~~~   87 (116)
T d1y81a1          70 LQVAKEAVEAGFKKLWFQ   87 (116)
T ss_dssp             HHHHHHHHHTTCCEEEEC
T ss_pred             HHHHHHHHhcCCceEEec
Confidence              3334566788877653

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.51  E-value=0.074  Score=40.82  Aligned_cols=36  Identities=17%  Similarity=0.088  Sum_probs=30.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR  134 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~  134 (294)
                      .+++|+|.|| |++|-+++..|.+.|.+|.++.+.++
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~~   37 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGDA   37 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecCc
Confidence            4688999997 99999999999999988777665543

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.47  E-value=0.065  Score=41.11  Aligned_cols=35  Identities=20%  Similarity=0.214  Sum_probs=29.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDK  133 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~R~~  133 (294)
                      ||+|.|.|+||.||...+.-+.+.  .++|.+++=+.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK   37 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            578999999999999999888775  47888886443

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.38  E-value=0.068  Score=44.31  Aligned_cols=37  Identities=14%  Similarity=0.157  Sum_probs=32.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR  134 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~  134 (294)
                      ...|+|+|.|| |..|...+.+|.++|++|+++-+++.
T Consensus        28 ~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          28 SNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             SSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            35689999997 99999999999999999999987653

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=92.06  E-value=0.073  Score=40.76  Aligned_cols=34  Identities=21%  Similarity=0.243  Sum_probs=28.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKD  132 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~R~  132 (294)
                      +|+|.|.|+||.||...+.-+.+.  .++|.+++=+
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~   37 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN   37 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence            489999999999999999888765  5888887644

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.02  E-value=0.15  Score=41.75  Aligned_cols=35  Identities=11%  Similarity=0.054  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK  133 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~  133 (294)
                      +.++|+|.|| |.-|...+.+|.++|++|+++-++.
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            4578999997 9999999999999999999986544

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=90.91  E-value=0.77  Score=35.41  Aligned_cols=94  Identities=12%  Similarity=0.068  Sum_probs=54.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccch--hhhcCCCcEEeecC-----------CCCHHHHHHHhcCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA--MESFGTYVESMAGD-----------ASNKKFLKTALRGV  164 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~~--~~~~~~~v~~v~~D-----------~~d~~~l~~~l~~~  164 (294)
                      |++|.|-| -|.||+.+++.|..++ .+|+++.......  .....-+......+           +.-...+..+++++
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v   79 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA   79 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence            57899998 5999999999998776 6777776533221  11111111111111           11112344567799


Q ss_pred             cEEEEcCCchHHh----hhhhcCCCEEEEecccc
Q 022625          165 RSIICPSEGFISN----AGSLKGVQHVILLSQLS  194 (294)
Q Consensus       165 d~Vi~~~~~~~~~----~~~~~gv~r~V~vSs~~  194 (294)
                      |+|+-|++.|...    .-.++|+ ++|++|+..
T Consensus        80 DvViEcTG~f~~~~~~~~hl~~G~-K~vi~~~~~  112 (171)
T d1cf2o1          80 DIVIDCTPEGIGAKNLKMYKEKGI-KAIFQGGEK  112 (171)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHTTC-EEEECTTSC
T ss_pred             CEEEEccCCCCCHHHHHHHHHcCC-CEEEECCCC
Confidence            9999998766322    2234575 677776654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.88  E-value=0.98  Score=32.79  Aligned_cols=76  Identities=11%  Similarity=0.052  Sum_probs=52.8

Q ss_pred             CCCeEEEEcCC----------ChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHh--cCCc
Q 022625           98 ARDAVLVTDGD----------SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--RGVR  165 (294)
Q Consensus        98 ~~~~vlVtGat----------G~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l--~~~d  165 (294)
                      ..++|||.|+.          .+-+.+.++.|.+.|++++++.-|++.....+...-+.+.--+ ..+.+.+.+  +..|
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~aD~lYfepl-t~e~v~~Ii~~E~p~   81 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPV-TLEDVLEIVRIEKPK   81 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSSEEECCCC-SHHHHHHHHHHHCCS
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhhcCceEEccC-CHHHHHHHHHHhCCC
Confidence            35899999983          3788999999999999999999999875533322222222222 456666655  4679


Q ss_pred             EEEEcCCch
Q 022625          166 SIICPSEGF  174 (294)
Q Consensus       166 ~Vi~~~~~~  174 (294)
                      .|+...+|.
T Consensus        82 ~ii~~~GGQ   90 (121)
T d1a9xa4          82 GVIVQYGGQ   90 (121)
T ss_dssp             EEECSSSTH
T ss_pred             EEEeehhhh
Confidence            998875554

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.78  E-value=0.12  Score=40.37  Aligned_cols=31  Identities=16%  Similarity=0.096  Sum_probs=29.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK  133 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~  133 (294)
                      |+|.|| |..|...+.+|+++|++|.++-++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            799996 9999999999999999999998875

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=90.52  E-value=0.2  Score=38.11  Aligned_cols=37  Identities=11%  Similarity=0.161  Sum_probs=30.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEEcCccc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN  135 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~R~~~~  135 (294)
                      ++++|.|.|+ |.+|+.++..|..++ .++.++++++++
T Consensus         2 p~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1           2 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            3579999996 999999998777776 488888887765

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=90.43  E-value=0.13  Score=42.33  Aligned_cols=32  Identities=13%  Similarity=0.099  Sum_probs=29.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK  133 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~  133 (294)
                      -|+|.|| |.+|..++.+|+++|++|+++.+..
T Consensus         5 DvvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           5 DVIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            3899997 9999999999999999999998864

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=89.93  E-value=0.28  Score=35.12  Aligned_cols=36  Identities=8%  Similarity=0.015  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEEcCccc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRN  135 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~---~g~~V~~~~R~~~~  135 (294)
                      .++++|.|| |++|-+++..|.+   .|.+|.++.|.+.-
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~i   56 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDMI   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccccc
Confidence            489999998 9999999987654   48899999987643

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.93  E-value=0.21  Score=37.04  Aligned_cols=37  Identities=19%  Similarity=0.221  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHH----CCCeEEEEEcCccch
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNA  136 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~----~g~~V~~~~R~~~~~  136 (294)
                      .++++|.|| |++|-+++..|..    .|.+|+++.+++..+
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~l   77 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKGNM   77 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccccCC
Confidence            579999997 9999999999963    589999988876543

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.79  E-value=0.029  Score=45.04  Aligned_cols=27  Identities=19%  Similarity=0.169  Sum_probs=24.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIK  127 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~  127 (294)
                      |+|+|.|| |-+|..++.+|+++|++|+
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v~   27 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSVL   27 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTTS
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCce
Confidence            68999998 9999999999999997643

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=89.77  E-value=0.16  Score=42.28  Aligned_cols=33  Identities=12%  Similarity=0.203  Sum_probs=29.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK  133 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~  133 (294)
                      ..|+|.|| |-+|..++.+|+++|+ +|+++.|+.
T Consensus         2 ~dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           2 PRIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            36999997 9999999999999996 699998864

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=89.76  E-value=0.25  Score=35.44  Aligned_cols=36  Identities=14%  Similarity=0.065  Sum_probs=28.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEEcCcc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKR  134 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~---~g~~V~~~~R~~~  134 (294)
                      ..++++|.|| |++|-+++..|.+   +|.+|+++.|.+.
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            3579999998 9999999976654   4568999988664

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.56  E-value=0.13  Score=42.46  Aligned_cols=35  Identities=11%  Similarity=0.041  Sum_probs=31.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN  135 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~  135 (294)
                      .+|+|.|| |-.|..++..|.++|++|+++.|.++.
T Consensus         3 ~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~~   37 (292)
T d1k0ia1           3 TQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTPD   37 (292)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence            37999998 899999999999999999999887643

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.54  E-value=0.19  Score=39.20  Aligned_cols=33  Identities=21%  Similarity=0.143  Sum_probs=28.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC--CCeEEEEEcCc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDK  133 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~R~~  133 (294)
                      |+|+|.|| |++|.+++..|.+.  +.+|+++.|+.
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            68999998 89999999999876  45788888765

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=89.26  E-value=0.46  Score=35.25  Aligned_cols=103  Identities=17%  Similarity=0.057  Sum_probs=60.5

Q ss_pred             CCCeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEcCC-c
Q 022625           98 ARDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-G  173 (294)
Q Consensus        98 ~~~~vlVtGat---G~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~-~  173 (294)
                      ..|+|.|.|||   +..|..+++.|.+.||++..+.-++. ..+..+  ...+ -++      .+.-..+|.++.+.+ .
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~-~~~i~g--~~~~-~~l------~~i~~~iD~v~v~~p~~   81 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQ-GEELFG--EEAV-ASL------LDLKEPVDILDVFRPPS   81 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGT-TSEETT--EECB-SSG------GGCCSCCSEEEECSCHH
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccc-cceeec--eecc-cch------hhccCCCceEEEeccHH
Confidence            45899999998   56999999999999999887654331 111111  1111 111      122235688887732 2


Q ss_pred             h---HHhhhhhcCCCEEEEecccccccCCCCchhccchhHHHHHHHHHHHHHhCCCCEE
Q 022625          174 F---ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYT  229 (294)
Q Consensus       174 ~---~~~~~~~~gv~r~V~vSs~~~~~~~~~~~~~~~~~~~~~~~~ae~~l~~~gl~~t  229 (294)
                      .   +.+.+.+.|++.+++-+...                   .+++.+.+++.|++++
T Consensus        82 ~v~~~v~~~~~~g~k~i~~q~G~~-------------------~~e~~~~a~~~Gi~vV  121 (136)
T d1iuka_          82 ALMDHLPEVLALRPGLVWLQSGIR-------------------HPEFEKALKEAGIPVV  121 (136)
T ss_dssp             HHTTTHHHHHHHCCSCEEECTTCC-------------------CHHHHHHHHHTTCCEE
T ss_pred             HHHHHHHHHHhhCCCeEEEecCcc-------------------CHHHHHHHHHcCCEEE
Confidence            1   23334566888766543211                   1134566777888765

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.22  E-value=0.19  Score=46.11  Aligned_cols=96  Identities=6%  Similarity=0.071  Sum_probs=56.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCccc-------------------hh------hhcCCCc--EEe
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------AM------ESFGTYV--ESM  147 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~~------~~~~~~v--~~v  147 (294)
                      .+...+|+|.|+ |++|.++++-|+..|. ++++++.+.-.                   +.      ...++.+  +++
T Consensus        22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~  100 (529)
T d1yova1          22 ALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFV  100 (529)
T ss_dssp             HHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEE
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEE
Confidence            345689999997 7899999999999996 66666543211                   00      0112223  333


Q ss_pred             ecCCCCH-HHHHHHhcCCcEEEEcCCc-----hHHhhhhhcCCCEEEEeccc
Q 022625          148 AGDASNK-KFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQL  193 (294)
Q Consensus       148 ~~D~~d~-~~l~~~l~~~d~Vi~~~~~-----~~~~~~~~~gv~r~V~vSs~  193 (294)
                      ..+..+. +.-.+.+.++|+||.+...     .+.+.|.+.++. ||...+.
T Consensus       101 ~~~~~~~~~~~~~~~~~~dvVv~~~~~~~~~~~l~~~c~~~~ip-~i~~~~~  151 (529)
T d1yova1         101 EESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIP-LLICRTY  151 (529)
T ss_dssp             SSCHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHHTCC-EEEEEEE
T ss_pred             cCCchhhhhhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEecc
Confidence            3332211 1112457788999988432     256677777764 6665543

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.88  E-value=0.17  Score=39.75  Aligned_cols=38  Identities=8%  Similarity=-0.003  Sum_probs=31.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES  139 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~  139 (294)
                      |+|.|.| .|++|..++..| ++|++|++++-++++...+
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKI   38 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHH
Confidence            6899998 599999998655 5799999999988765544

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=88.85  E-value=0.21  Score=37.52  Aligned_cols=31  Identities=13%  Similarity=0.165  Sum_probs=26.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK  133 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~  133 (294)
                      +|+|.|| |++|-+++..|. ++.+|+++.|.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            7999997 999999999985 578999988754

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=88.73  E-value=0.22  Score=38.93  Aligned_cols=32  Identities=16%  Similarity=0.061  Sum_probs=28.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCc
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK  133 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~  133 (294)
                      +|+|.|| |..|...+.+|.++|+ +|+++-++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            6999997 9999999999999996 799988765

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=88.71  E-value=0.25  Score=41.90  Aligned_cols=36  Identities=6%  Similarity=0.194  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEEcCcc
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR  134 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g--~~V~~~~R~~~  134 (294)
                      .+|+|+|.|| |.-|...+..|+++|  ++|+++-|+..
T Consensus         3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            5689999998 999999999999876  69999988754

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=88.66  E-value=1  Score=32.11  Aligned_cols=53  Identities=15%  Similarity=0.154  Sum_probs=37.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcC-CCcEEeecCC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDA  151 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~v~~v~~D~  151 (294)
                      ||+|||.--+-.+-..+...|-..|++|+....+...+.+... ....++..|+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~~~dliilD~   54 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDI   54 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEEC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhccCCEEEEec
Confidence            6899999999999999999999999999876666554333221 2344455554

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=88.65  E-value=0.3  Score=39.87  Aligned_cols=41  Identities=12%  Similarity=0.036  Sum_probs=35.5

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchh
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM  137 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~  137 (294)
                      .+.+++|+|-|- |.+|+++++.|.+.|.+|++.+.+.....
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~   76 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVS   76 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHH
Confidence            456899999996 99999999999999999998887765543

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=88.51  E-value=0.042  Score=41.59  Aligned_cols=72  Identities=8%  Similarity=0.006  Sum_probs=39.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc-CCchHHhhhh
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGFISNAGS  180 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~-~~~~~~~~~~  180 (294)
                      |-+.|+ |.+|+.+++.|.+.++.+.+..|+++++..+....-. ...+.      .++++.+|+||.+ .+..+.+.+.
T Consensus         2 IgfIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~-~~~~~------~~~~~~~DiVil~v~d~~i~~v~~   73 (153)
T d2i76a2           2 LNFVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGG-KAATL------EKHPELNGVVFVIVPDRYIKTVAN   73 (153)
T ss_dssp             CEEESC-CHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCC-CCCSS------CCCCC---CEEECSCTTTHHHHHT
T ss_pred             EEEEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccc-cccch------hhhhccCcEEEEeccchhhhHHHh
Confidence            346674 9999999998866544446789998876654321111 11122      2456778999988 4444444444


Q ss_pred             h
Q 022625          181 L  181 (294)
Q Consensus       181 ~  181 (294)
                      .
T Consensus        74 ~   74 (153)
T d2i76a2          74 H   74 (153)
T ss_dssp             T
T ss_pred             h
Confidence            3

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.32  E-value=0.56  Score=36.27  Aligned_cols=39  Identities=10%  Similarity=0.033  Sum_probs=33.8

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK  133 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~  133 (294)
                      ....||+|+|.|.+.-+|+-++.-|+++|..|..+....
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence            346789999999999999999999999999998765443

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.26  E-value=0.19  Score=42.19  Aligned_cols=35  Identities=9%  Similarity=0.096  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR  134 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~  134 (294)
                      |..|+|.|| |..|..+|.+|+++|++|.++-++..
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            346899997 99999999999999999999987653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=87.94  E-value=0.37  Score=39.54  Aligned_cols=37  Identities=11%  Similarity=0.087  Sum_probs=32.6

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK  133 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~  133 (294)
                      .+.+++|+|-|- |.+|+++++.|.+.|.+|++++...
T Consensus        28 ~l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~~   64 (242)
T d1v9la1          28 GIEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDIN   64 (242)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeeccc
Confidence            356899999995 9999999999999999999988643

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=87.94  E-value=0.14  Score=39.37  Aligned_cols=33  Identities=12%  Similarity=-0.025  Sum_probs=27.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD  132 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~  132 (294)
                      ..+|+|.|| |++|-+++..|.+.|.++.++.+.
T Consensus         3 ~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~~   35 (183)
T d1d7ya1           3 KAPVVVLGA-GLASVSFVAELRQAGYQGLITVVG   35 (183)
T ss_dssp             CSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhcCCceEEEEEe
Confidence            346999997 999999999999999776665543

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=87.53  E-value=0.074  Score=41.47  Aligned_cols=67  Identities=9%  Similarity=0.041  Sum_probs=44.0

Q ss_pred             CCCeEEEEcCCChHHHH--HHHHHHHC----CCeEEEEEcCccchhhh----------cCCCcEEeecCCCCHHHHHHHh
Q 022625           98 ARDAVLVTDGDSDIGQM--VILSLIVK----RTRIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTAL  161 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~--l~~~L~~~----g~~V~~~~R~~~~~~~~----------~~~~v~~v~~D~~d~~~l~~~l  161 (294)
                      +.++|.|.|| |.+|..  ++..|+..    +.++++++.+++++...          ++...++...  +|   .++++
T Consensus         1 p~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td---~~eaL   74 (171)
T d1obba1           1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MN---LDDVI   74 (171)
T ss_dssp             CCCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SC---HHHHH
T ss_pred             CCcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CC---hhhcc
Confidence            4689999997 888865  44445532    46999999998764321          1222222221  23   45689


Q ss_pred             cCCcEEEEc
Q 022625          162 RGVRSIICP  170 (294)
Q Consensus       162 ~~~d~Vi~~  170 (294)
                      +++|+|++.
T Consensus        75 ~dad~Vv~~   83 (171)
T d1obba1          75 IDADFVINT   83 (171)
T ss_dssp             TTCSEEEEC
T ss_pred             cCCCeEeee
Confidence            999999998

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=87.40  E-value=0.62  Score=35.13  Aligned_cols=80  Identities=13%  Similarity=0.062  Sum_probs=46.2

Q ss_pred             CeEEEEcCCChHHHH-HHHHHHHC-CCeEEEEE-cCccchhhhcCC-CcEEeecCCCCHHHHHHHhcCCcEEEEcCC-ch
Q 022625          100 DAVLVTDGDSDIGQM-VILSLIVK-RTRIKALV-KDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE-GF  174 (294)
Q Consensus       100 ~~vlVtGatG~IG~~-l~~~L~~~-g~~V~~~~-R~~~~~~~~~~~-~v~~v~~D~~d~~~l~~~l~~~d~Vi~~~~-~~  174 (294)
                      ++|.|.|+ |.+|+. .+..|... ++++++++ ++++++...... ++     ++.+  .++++++++|+|+.+++ ..
T Consensus         2 iri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~-----~~~~--~~~~l~~~~D~V~I~tp~~~   73 (164)
T d1tlta1           2 LRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRI-----PYAD--SLSSLAASCDAVFVHSSTAS   73 (164)
T ss_dssp             EEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTC-----CBCS--SHHHHHTTCSEEEECSCTTH
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccc-----cccc--cchhhhhhcccccccccchh
Confidence            57999996 899976 45555543 67888765 555554432111 12     2222  23344678999998843 33


Q ss_pred             ---HHhhhhhcCCCEEE
Q 022625          175 ---ISNAGSLKGVQHVI  188 (294)
Q Consensus       175 ---~~~~~~~~gv~r~V  188 (294)
                         ++..+.+.| ++++
T Consensus        74 h~~~~~~al~~g-k~V~   89 (164)
T d1tlta1          74 HFDVVSTLLNAG-VHVC   89 (164)
T ss_dssp             HHHHHHHHHHTT-CEEE
T ss_pred             cccccccccccc-ceee
Confidence               334455666 4653

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.70  E-value=0.57  Score=39.46  Aligned_cols=37  Identities=11%  Similarity=-0.000  Sum_probs=33.1

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK  133 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~  133 (294)
                      .+.+++|+|-|- |.+|+++++.|.+.|++|++++...
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~~   69 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGESD   69 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEccc
Confidence            457899999996 9999999999999999999987643

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=86.34  E-value=0.49  Score=36.51  Aligned_cols=54  Identities=9%  Similarity=0.145  Sum_probs=42.3

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcEEEEc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP  170 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~Vi~~  170 (294)
                      ...+|+|+|.|.+.-+|+-++..|.++|++|+.+.....                     .+++..+.+|+||.+
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~---------------------~l~~~~~~ADivI~a   87 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK---------------------NLRHHVENADLLIVA   87 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS---------------------CHHHHHHHCSEEEEC
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccc---------------------hhHHHHhhhhHhhhh
Confidence            456899999999999999999999999999976543221                     134556777888887

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.25  E-value=0.39  Score=39.73  Aligned_cols=31  Identities=19%  Similarity=0.115  Sum_probs=28.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK  133 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~  133 (294)
                      |+|.|| |..|...+.+|.++|++|+++-++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789997 9999999999999999999998765

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=86.21  E-value=0.31  Score=37.20  Aligned_cols=69  Identities=12%  Similarity=-0.070  Sum_probs=47.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhh---c----------------CCCcEEeecCCCCHHHH
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F----------------GTYVESMAGDASNKKFL  157 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~----------------~~~v~~v~~D~~d~~~l  157 (294)
                      .++++||..|+  +.|+ .+..|+++|++|++++.++......   .                ...+.++.+|+.+... 
T Consensus        19 ~~~~rvLd~GC--G~G~-~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~-   94 (201)
T d1pjza_          19 VPGARVLVPLC--GKSQ-DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA-   94 (201)
T ss_dssp             CTTCEEEETTT--CCSH-HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH-
T ss_pred             CCCCEEEEecC--cCCH-HHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc-
Confidence            36789999998  3565 5668899999999999887542211   1                1245778888877443 


Q ss_pred             HHHhcCCcEEEEc
Q 022625          158 KTALRGVRSIICP  170 (294)
Q Consensus       158 ~~~l~~~d~Vi~~  170 (294)
                       .....+|.|+..
T Consensus        95 -~~~~~~D~i~~~  106 (201)
T d1pjza_          95 -RDIGHCAAFYDR  106 (201)
T ss_dssp             -HHHHSEEEEEEE
T ss_pred             -ccccceeEEEEE
Confidence             223456887764

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.19  E-value=0.51  Score=35.68  Aligned_cols=34  Identities=21%  Similarity=0.191  Sum_probs=28.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEEcCc
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK  133 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~~g~~-V~~~~R~~  133 (294)
                      +++|+|.|| |.+|...+..+++.|.+ |+++.|..
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            568999997 99999999999999975 66776654

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=86.14  E-value=3.1  Score=29.84  Aligned_cols=88  Identities=11%  Similarity=0.142  Sum_probs=54.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhcCCcE-EEEcCCchHH
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRS-IICPSEGFIS  176 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~~~d~-Vi~~~~~~~~  176 (294)
                      +..+|+|-|-||..|+.-++++++.|.+|++-+....-..+..  ++-+  .|.- .+.+++  .++|+ +|+..+.+..
T Consensus         5 k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~~~~--giPV--f~sV-~eAv~~--~~~~~SvIfVPp~~a~   77 (119)
T d2nu7a1           5 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHL--GLPV--FNTV-REAVAA--TGATASVIYVPAPFCK   77 (119)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTEEET--TEEE--ESSH-HHHHHH--HCCCEEEECCCGGGHH
T ss_pred             CCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCCcccC--CCch--hhHH-HHHHHH--hCCCeEEEeccHHHHH
Confidence            3579999999999999999999999999998776543222211  1111  1211 122332  24554 3444555554


Q ss_pred             hhh---hhcCCCEEEEecc
Q 022625          177 NAG---SLKGVQHVILLSQ  192 (294)
Q Consensus       177 ~~~---~~~gv~r~V~vSs  192 (294)
                      +++   ..+|++.+|.++-
T Consensus        78 dA~~EAi~agI~~iV~ITE   96 (119)
T d2nu7a1          78 DSILEAIDAGIKLIITITE   96 (119)
T ss_dssp             HHHHHHHHTTCSEEEECCC
T ss_pred             HHHHHHHHCCCCEEEEecC
Confidence            543   3679998887763

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=85.62  E-value=0.95  Score=35.68  Aligned_cols=89  Identities=13%  Similarity=0.128  Sum_probs=57.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC---eEEEEEcCccchhhhcCCCcEEeecC-C------------------CCHHHH
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYVESMAGD-A------------------SNKKFL  157 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~v~~v~~D-~------------------~d~~~l  157 (294)
                      ++|.|.|- |+-|..++.+|.+.+.   +.+++.-+.+.+.. .+...++..+. +                  .+.+.+
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~-~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~I   78 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEA-SNADVKIQIGENITRGLGAGGRPEIGEQAALESEEKI   78 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHT-CCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHHH
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHHHHhc-CCcceEEecccccCCCcccccCchhhHhHHHHHHHHH
Confidence            47889997 8999999999998763   55555555544332 22223333321 1                  135778


Q ss_pred             HHHhcCCcEEEEc--CC--------chHHhhhhhcCCCEEEEe
Q 022625          158 KTALRGVRSIICP--SE--------GFISNAGSLKGVQHVILL  190 (294)
Q Consensus       158 ~~~l~~~d~Vi~~--~~--------~~~~~~~~~~gv~r~V~v  190 (294)
                      .+.++++|.||.+  .+        ..+++.+++.++--+-++
T Consensus        79 ~~~l~~~d~vfi~AGlGGgTGtgaapviA~~ake~g~lvv~iv  121 (194)
T d1w5fa1          79 REVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMGILTVAIV  121 (194)
T ss_dssp             HHHTTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             HHHhcCCCeEEEEEecCCCcccchHHHHHHHHHHcCCceEEEE
Confidence            8889999999987  22        247888888886443333

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.57  E-value=0.59  Score=37.45  Aligned_cols=34  Identities=15%  Similarity=0.135  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEEcCcc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR  134 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~R~~~  134 (294)
                      .+|+|.|| |..|..++..|.++|. +|.++-|.+.
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            68999998 9999999999999995 8888888664

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=85.56  E-value=0.41  Score=38.21  Aligned_cols=33  Identities=21%  Similarity=0.305  Sum_probs=29.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR  134 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~  134 (294)
                      -|+|.|| |-.|...+.+|+++|++|+++.+++.
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            4899997 99999999999999999999988754

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=85.42  E-value=1.8  Score=31.58  Aligned_cols=76  Identities=8%  Similarity=0.054  Sum_probs=53.2

Q ss_pred             CCCeEEEEcC----------CChHHHHHHHHHHHCCCeEEEEEcCccchhhhcCCCcEEeecCCCCHHHHHHHhc--CCc
Q 022625           98 ARDAVLVTDG----------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVR  165 (294)
Q Consensus        98 ~~~~vlVtGa----------tG~IG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~v~~v~~D~~d~~~l~~~l~--~~d  165 (294)
                      ..++|||.|+          -.+-+.+.++.|.+.|++++++.-|++.....+...-+.+. .--+.+.+.+.++  ..|
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~aD~lYf-ePlt~e~v~~Ii~~E~pd   84 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATYI-EPIHWEVVRKIIEKERPD   84 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSEEEC-SCCCHHHHHHHHHHHCCS
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhhcceeee-ecCCHHHHHHHHHHhCcC
Confidence            3589999998          34678999999999999999999999875433321122222 2234577777664  679


Q ss_pred             EEEEcCCch
Q 022625          166 SIICPSEGF  174 (294)
Q Consensus       166 ~Vi~~~~~~  174 (294)
                      .|+...+|.
T Consensus        85 ~il~~~GGQ   93 (127)
T d1a9xa3          85 AVLPTMGGQ   93 (127)
T ss_dssp             EEECSSSHH
T ss_pred             CeEEEeeee
Confidence            988775543

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=85.08  E-value=0.45  Score=39.34  Aligned_cols=37  Identities=8%  Similarity=-0.039  Sum_probs=32.8

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK  133 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~  133 (294)
                      .+.+++|+|-|- |.+|+.+++.|.+.|++|++++...
T Consensus        33 ~l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD~~   69 (255)
T d1bgva1          33 TLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSGPD   69 (255)
T ss_dssp             CSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEETT
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCC
Confidence            457899999995 9999999999999999999987643

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=84.26  E-value=0.51  Score=33.16  Aligned_cols=38  Identities=13%  Similarity=-0.028  Sum_probs=30.9

Q ss_pred             cCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc
Q 022625           96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR  134 (294)
Q Consensus        96 ~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~  134 (294)
                      .-.+|+|+|.|+ |.-|..++.+|+..+-+++.+.|...
T Consensus        29 ~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          29 LFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            346899999997 89999999999988777766666543

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.01  E-value=1.2  Score=35.06  Aligned_cols=71  Identities=15%  Similarity=0.156  Sum_probs=44.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccch-hhhc---------CCCcEEee-cCCCCHHHHHHHh-cCCcEE
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESF---------GTYVESMA-GDASNKKFLKTAL-RGVRSI  167 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~---------~~~v~~v~-~D~~d~~~l~~~l-~~~d~V  167 (294)
                      |+|+|+|. +..|..+++.|++.|++|.++.-.+++. ....         ..++.++. .++.+.+.++..- ...|.+
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dli   79 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVI   79 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEE
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccce
Confidence            67889975 6789999999999999998876433221 1100         01344443 4666655443322 256988


Q ss_pred             EEcC
Q 022625          168 ICPS  171 (294)
Q Consensus       168 i~~~  171 (294)
                      |.+.
T Consensus        80 i~~g   83 (203)
T d2blna2          80 FSFY   83 (203)
T ss_dssp             EEES
T ss_pred             eeee
Confidence            8774

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.15  E-value=0.62  Score=39.09  Aligned_cols=34  Identities=15%  Similarity=0.091  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCcc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR  134 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~  134 (294)
                      -.|+|.|| |..|...+.+|.++|.+|+++.++++
T Consensus         8 ~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           8 VDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            46999998 99999999999999999999988764

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=81.68  E-value=0.92  Score=34.39  Aligned_cols=90  Identities=12%  Similarity=0.077  Sum_probs=48.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHH-C-CCeEEEEE-cCccchhhhc--CCCcEEeecCCCCHHHHHHH--hcCCcEEEEcC
Q 022625           99 RDAVLVTDGDSDIGQMVILSLIV-K-RTRIKALV-KDKRNAMESF--GTYVESMAGDASNKKFLKTA--LRGVRSIICPS  171 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~~~L~~-~-g~~V~~~~-R~~~~~~~~~--~~~v~~v~~D~~d~~~l~~~--l~~~d~Vi~~~  171 (294)
                      ..++.|.| +|.||+.+..++++ . ..++++++ |+.+.....+  ..++.+..   ...+.+.+.  +.++|+||.++
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~---~~~d~l~~~~~~~~iDiVf~AT   79 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY---AGVEGLIKLPEFADIDFVFDAT   79 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES---SHHHHHHHSGGGGGEEEEEECS
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc---cceeeeeecccccccCEEEEcC
Confidence            45899999 79999976555554 3 35777774 5554221111  11233221   223444432  45789999984


Q ss_pred             C-chHH---hhh--hhcCCCEEEEeccc
Q 022625          172 E-GFIS---NAG--SLKGVQHVILLSQL  193 (294)
Q Consensus       172 ~-~~~~---~~~--~~~gv~r~V~vSs~  193 (294)
                      + +...   .+.  .+.| .++|-.|+.
T Consensus        80 pag~h~~~~~~~~aa~~G-~~VID~s~a  106 (157)
T d1nvmb1          80 SASAHVQNEALLRQAKPG-IRLIDLTPA  106 (157)
T ss_dssp             CHHHHHHHHHHHHHHCTT-CEEEECSTT
T ss_pred             CchhHHHhHHHHHHHHcC-CEEEEcccc
Confidence            4 3321   222  3344 356666663

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=81.48  E-value=0.75  Score=38.98  Aligned_cols=30  Identities=13%  Similarity=-0.044  Sum_probs=27.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEEcC
Q 022625          102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKD  132 (294)
Q Consensus       102 vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~  132 (294)
                      |+|.|+ |+-|..++.+|+++|++|.++-+.
T Consensus         5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence            789995 999999999999999999999875

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.36  E-value=0.73  Score=38.05  Aligned_cols=32  Identities=16%  Similarity=0.201  Sum_probs=29.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc
Q 022625          101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK  133 (294)
Q Consensus       101 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~  133 (294)
                      -|+|.|+ |..|...+.+|+++|.+|+++.+.+
T Consensus        18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            4899997 9999999999999999999998765

>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB
species: Escherichia coli [TaxId: 562]

Probab=81.34  E-value=5.2  Score=34.20  Aligned_cols=95  Identities=4%  Similarity=-0.104  Sum_probs=64.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCc-c-c------hhhhcCCCcEEeecCCCCH---HHHHHHhcCCc
Q 022625           97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-R-N------AMESFGTYVESMAGDASNK---KFLKTALRGVR  165 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~-~-~------~~~~~~~~v~~v~~D~~d~---~~l~~~l~~~d  165 (294)
                      +.|-+|+=.+. ..-|-...+.|+..|++||=+-+.. . .      .....+.+-+.+..|+.++   +.+.++++.+|
T Consensus         9 L~GirVld~~~-~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~~Lv~~aD   87 (402)
T d1xk7a1           9 LAGLRVVFSGI-EIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTD   87 (402)
T ss_dssp             TTTCEEEEECC-SSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEeCC-hhHHHHHHHHHHHhCCeEEEECCCCCCCccccCCchhHHhCCCCeEEEEeCcCHHHHHHHHHHHhhcC
Confidence            45678877763 5568888889999999999887532 1 1      1111234667899999887   45678889999


Q ss_pred             EEEEc-CCchHH------hhhhhcCCCEEEEeccc
Q 022625          166 SIICP-SEGFIS------NAGSLKGVQHVILLSQL  193 (294)
Q Consensus       166 ~Vi~~-~~~~~~------~~~~~~gv~r~V~vSs~  193 (294)
                      +||++ .++.+.      +..++.+ .++||+|-.
T Consensus        88 v~i~n~rpg~~~~lGl~~~~L~~~n-P~lI~~sis  121 (402)
T d1xk7a1          88 IFIEASKGPAFARRGITDEVLWQHN-PKLVIAHLS  121 (402)
T ss_dssp             EEEEECSSSHHHHTTCCHHHHHHHC-TTCEEEEEE
T ss_pred             Cceeeecccccccccccccchhhcc-ccccceeee
Confidence            99988 444322      2344444 568888643

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=81.29  E-value=0.47  Score=38.71  Aligned_cols=35  Identities=17%  Similarity=0.148  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCChHHHHHH-----HHHHHCCCeEEEEEcCcc
Q 022625           99 RDAVLVTDGDSDIGQMVI-----LSLIVKRTRIKALVKDKR  134 (294)
Q Consensus        99 ~~~vlVtGatG~IG~~l~-----~~L~~~g~~V~~~~R~~~  134 (294)
                      |++|.|+| -|++|+..+     ..|+++|++|.+++-++.
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            57899998 899998654     478889999999998864

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=81.13  E-value=2  Score=32.80  Aligned_cols=91  Identities=21%  Similarity=0.145  Sum_probs=55.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc--hhhh---------cCCCcE------------EeecCCCCHHH
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES---------FGTYVE------------SMAGDASNKKF  156 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~--~~~~---------~~~~v~------------~v~~D~~d~~~  156 (294)
                      ++|.|-|= |.||+.+.|.|..++.+|+++..-.+.  ..-+         ++..++            +....-.|++.
T Consensus         1 ikigINGf-GRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~   79 (168)
T d2g82a1           1 MKVGINGF-GRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE   79 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred             CEEEEECC-cHHHHHHHHHHhcCCCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChHH
Confidence            57888886 999999999999999999888753221  1101         111111            11122334444


Q ss_pred             HHHHhcCCcEEEEcCCch----HHhhhhhcCCCEEEEec
Q 022625          157 LKTALRGVRSIICPSEGF----ISNAGSLKGVQHVILLS  191 (294)
Q Consensus       157 l~~~l~~~d~Vi~~~~~~----~~~~~~~~gv~r~V~vS  191 (294)
                      +.=.-.++|+|+-+++.+    .+..-.+.|++|+++..
T Consensus        80 i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSA  118 (168)
T d2g82a1          80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITA  118 (168)
T ss_dssp             CCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESS
T ss_pred             CcccccCCceeEeccccccchHHhhhhhccccceeeecc
Confidence            433345789999886655    22223346899998853

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.04  E-value=2  Score=34.07  Aligned_cols=92  Identities=12%  Similarity=0.194  Sum_probs=59.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEEcCccchhhhcCCCcEEeecCC-------------------CCHH
Q 022625           98 ARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYVESMAGDA-------------------SNKK  155 (294)
Q Consensus        98 ~~~~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~v~~v~~D~-------------------~d~~  155 (294)
                      ...+|.|.|- |+-|..++.+|.+.|.   +.+++.-+.+.+... +...++..+.-                   .+.+
T Consensus        14 ~~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~-~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~~~   91 (209)
T d2vapa1          14 TKAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRT-KADKKILIGKKLTRGLGAGGNPKIGEEAAKESAE   91 (209)
T ss_dssp             TCCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTS-CCSEEEECCTTTTTTBCCTTCHHHHHHHHHHTHH
T ss_pred             cCCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcC-CcchhcccccccccccccccchHHHHHHHHHHHH
Confidence            4578999997 8899999999998774   445555554443322 12222222211                   2346


Q ss_pred             HHHHHhcCCcEEEEc--C-C-------chHHhhhhhcCCCEEEEec
Q 022625          156 FLKTALRGVRSIICP--S-E-------GFISNAGSLKGVQHVILLS  191 (294)
Q Consensus       156 ~l~~~l~~~d~Vi~~--~-~-------~~~~~~~~~~gv~r~V~vS  191 (294)
                      .+.+.++++|.||.+  . +       ..+++.+++.++.-+-+++
T Consensus        92 ~I~~~l~~~d~vfi~AGlGGGTGsgaapvia~~ake~g~lvv~ivt  137 (209)
T d2vapa1          92 EIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGALTVAVVT  137 (209)
T ss_dssp             HHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             HHHHhccCCCEEEEEEeCCCCccccHHHHHHHHHHHcCCcEEEEEe
Confidence            788889999999987  2 2       2477888888865444443

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=80.44  E-value=0.86  Score=36.63  Aligned_cols=35  Identities=9%  Similarity=0.126  Sum_probs=31.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc
Q 022625          100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN  135 (294)
Q Consensus       100 ~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~  135 (294)
                      ..|+|.|| |-.|...+.+|+++|.+|.++.+++..
T Consensus         5 ~DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~   39 (253)
T d2gqfa1           5 SENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKI   39 (253)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence            45899998 999999999999999999999988653

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=80.12  E-value=1.2  Score=34.65  Aligned_cols=40  Identities=10%  Similarity=0.022  Sum_probs=35.0

Q ss_pred             CcCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEEcCccc
Q 022625           95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN  135 (294)
Q Consensus        95 ~~~~~~~vlVtGatG~IG~~l~~~L~~~g~~V~~~~R~~~~  135 (294)
                      ....+|+|+|.|+ |.-|-.++.+|+..+.++..+.|....
T Consensus        28 ~~~~gK~V~VvG~-G~Sa~dia~~~~~~~~~~~~~~~~~~~   67 (235)
T d1w4xa2          28 VDFSGQRVGVIGT-GSSGIQVSPQIAKQAAELFVFQRTPHF   67 (235)
T ss_dssp             CCCBTCEEEEECC-SHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred             CCCCCCEEEEECC-CccHHHHHHHHHhhhccccccccccce
Confidence            3457899999996 899999999999999999999888754

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=80.06  E-value=0.76  Score=37.42  Aligned_cols=39  Identities=10%  Similarity=0.192  Sum_probs=32.8

Q ss_pred             CCCCeEEEEcCCChHHHHH-----HHHHHHCCCeEEEEEcCccc
Q 022625           97 EARDAVLVTDGDSDIGQMV-----ILSLIVKRTRIKALVKDKRN  135 (294)
Q Consensus        97 ~~~~~vlVtGatG~IG~~l-----~~~L~~~g~~V~~~~R~~~~  135 (294)
                      .++.+|+|+.|-|++|+..     +..|+++|++|.+++-++..
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~~   60 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAA   60 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            4678888998899999976     68888999999999998753