Citrus Sinensis ID: 022636

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290----

MSSPAEYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVYPYFYWFLRVKNYAAPSNPPGHSAGCVKPNIIRDIFPLSTQARAHTHTHTHTHTQKLVARWRIGAPAINRAQPERTTGVAFRGRSYRLSD

cccHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccEEEEEHHHHHHHccEEEEEEEEEccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccHHHHHHHHHHHHHHccccHHHHHccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc

*SSPAEYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVYPYFYWFLRVKNYAAP*****HSAGC*********************************************************RS*R***

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Derlin-1	May be involved in the degradation process of specific misfolded endoplasmic reticulum (ER) luminal proteins.	probable	Q8VZU9
Derlin-1	May be involved in the degradation process of specific misfolded endoplasmic reticulum (ER) luminal proteins.	probable	Q06397
Derlin-1.2	May be involved in the degradation process of specific misfolded endoplasmic reticulum (ER) luminal proteins.	probable	Q4G2J5

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2XOV, chain A
Confidence level:confident
Coverage over the Query: 10-186
View the alignment between query and template
View the model in PyMOL