Citrus Sinensis ID: 022653
Local Sequence Feature Prediction
| Prediction and Method | Result |
|---|
|
|
Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
| Annotation | Function Description | Confidence Level | Reference Protein |
| Ribosomal RNA small subunit methyltransferase NEP1 | Involved in 40S ribosomal subunit biogenesis and 18S rRNA processing. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 1248 in human 18S rRNA. Thus, appears to be the methyltransferase involved in the biosynthesis of the hypermodified N1-methyl-N3-(3-amino-3-carboxypropyl) pseudouridine (m1acp3-Psi) conserved in eukaryotic 18S rRNA. | probable | O35130 |
| Ribosomal RNA small subunit methyltransferase nep-1 | Involved in 40S ribosomal subunit biogenesis and 18S rRNA processing. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 1248 in human 18S rRNA. Thus, appears to be the methyltransferase involved in the biosynthesis of the hypermodified N1-methyl-N3-(3-amino-3-carboxypropyl) pseudouridine (m1acp3-Psi) conserved in eukaryotic 18S rRNA. | probable | Q9XX15 |
Prediction of Enzyme Commission Number
No confident prediction of EC number!
Spatial Structural Prediction
Structural Models Based on Templates
|
Template: 3OII, chain A Confidence level:very confident Coverage over the Query: 81-294 View the alignment between query and template View the model in PyMOL |
|
Template: 3LVG, chain D Confidence level:probable Coverage over the Query: 2-68 View the alignment between query and template View the model in PyMOL |