Citrus Sinensis ID: 022769

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290--
Protein Sequence
MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPNKLQ
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccEEEEEEEEEEccHHHHHHHHHHccccEEEEEEccccccEEEEEEEccccccccEEEEEEcccccccccccccEEEEEEEccHHHHHHHHHHcccEEEcccccccccccEEEEEEcccccEEEEEEcccccccccccccccccHHHHHHHHHHHHccEEEEEEcccccEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEcccccccccccccccccccccccccccccccccccccEEccccccHHHHHHHHHcHccHHHHcccccHHHHEcccccEEEEEccccccccccccHHHHHHcccccccEEEEEEEEcccHHHHHHHHHHHHcHHHEEccccccccEEEEEEEcccccccEEEEEEEEcccccccccccEEEEEEEcHHHHHHHHHHHHccccEEEcccccccccEEEEEEEcccccEEEEEEcccccccccEEEEEEccHHHHHHHHHHHHccHEEEccccHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mlrtlpiaspssltvstynktslpsqsslklspfcvnndggnnisyCYSTSRRLALFQLgaaipqshfFGAKALKLLRAegstieastsgnmaptsntvteqnVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMkllrkrdipedrytnaflgygpedsHFVVELTYnygvdkydigtgfghfgiAVEDVAKTVDLVKAkggkvtrepgpvkggntviafiedpdgykfellergptpeplcQVMLRVGDLDRAINFYKKAFGMEllrkrdnpdykvnsyllppnklq
Flexible Loop (DISEMBL)
mlrtlpiaspssltvsTYNKTslpsqsslklsPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIeastsgnmaptsntvteqnvldwvksdkrrMLHVVyrvgdldktikFYTECLGmkllrkrdipeDRYTNAFlgygpedsHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKakggkvtrepgpvkggntvIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFgmellrkrdnpdykvnsyllppnklq
Low Complexity Region (SEG)
MLRTLPIASPSSLTVSTYNKTslpsqsslklspFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPNKLQ
Disordered region (IsUnstruct)
*******************************SPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRA*********************EQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRD***YKV***********
Disordered Region (DISOPRED)
***************************************************RRLALFQLGAAIPQSHFFGA****LLRAEGST********************VLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPN***
Disordered Region (DISEMBL)
MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPNKLQ
Disordered Region (DISPRO)
MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGN*AP***TVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPNKL*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPNKLQ
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	292	2.2.26 [Sep-21-2011]
Q8W593	350	Probable lactoylglutathio	yes	no	0.791	0.66	0.741	1e-101
Q948T6	291	Lactoylglutathione lyase	no	no	0.667	0.670	0.695	1e-78
Q39366	282	Putative lactoylglutathio	N/A	no	0.589	0.609	0.728	1e-78
P0AC83	135	Lactoylglutathione lyase	yes	no	0.428	0.925	0.584	5e-40
P0AC81	135	Lactoylglutathione lyase	N/A	no	0.428	0.925	0.584	5e-40
P0AC82	135	Lactoylglutathione lyase	N/A	no	0.428	0.925	0.584	5e-40
Q55595	131	Probable lactoylglutathio	N/A	no	0.421	0.938	0.593	6e-40
P0A1Q2	135	Lactoylglutathione lyase	yes	no	0.424	0.918	0.564	3e-39
P0A1Q3	135	Lactoylglutathione lyase	N/A	no	0.424	0.918	0.564	3e-39
P44638	135	Lactoylglutathione lyase	yes	no	0.452	0.977	0.575	5e-39

>sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=2 SV=1

 Score =  368 bits (944), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/240 (74%), Positives = 199/240 (82%), Gaps = 9/240 (3%)

Query: 47  CYSTSRRLALFQLG------AAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVT 100
           C+S S R  +  L         +PQS  FG  + KLLR   + +  + SG  A      T
Sbjct: 18  CFSDSPRFPISLLSRNLSRTLHVPQSQLFGLTSHKLLRRSVNCLGVAESGKAA---QATT 74

Query: 101 EQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGP 160
           + ++L WVK+DKRRMLHVVYRVGD+D+TIKFYTECLGMKLLRKRDIPE++YTNAFLGYGP
Sbjct: 75  QDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGP 134

Query: 161 EDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNT 220
           EDSHFV+ELTYNYGVDKYDIG GFGHFGIAV+DVAKTV+LVKAKGGKV+REPGPVKGG T
Sbjct: 135 EDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKT 194

Query: 221 VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAI FY+KAFGMELLR RDNP+YK
Sbjct: 195 VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYK 254

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Arabidopsis thaliana (taxid: 3702)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2

 Score =  293 bits (749), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 139/200 (69%), Positives = 164/200 (82%), Gaps = 5/200 (2%)

Query: 88  TSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP 147
            SG+ A  S  V    VL+W K DK+R+LH VYRVGDLD+TIK YTEC GMKLLRKRD+P
Sbjct: 2   ASGSEAEKSPEV----VLEWPKKDKKRLLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVP 57

Query: 148 EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAK-GG 206
           E++YTNAFLG+GPED++F +ELTYNYGVDKYDIG GFGHF IA EDV K  + +K+    
Sbjct: 58  EEKYTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCC 117

Query: 207 KVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAF 266
           K+TREPGPVKGG+TVIAF +DPDGY FEL++RGPTPEPLCQVMLRVGDLDR+I FY+KA 
Sbjct: 118 KITREPGPVKGGSTVIAFAQDPDGYMFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAL 177

Query: 267 GMELLRKRDNPDYKVNSYLL 286
           GM+LLRK+D PDYK    +L
Sbjct: 178 GMKLLRKKDVPDYKYTIAML 197

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q39366|LGUL_BRAOG Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1

 Score =  293 bits (749), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 129/177 (72%), Positives = 157/177 (88%)

Query: 103 NVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED 162
           ++++W K DKRR LHVVYRVGDLD+TI+FYTEC GMK+LRKRD+PE++Y+NAFLG+GPE 
Sbjct: 6   DLVEWPKKDKRRFLHVVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGFGPET 65

Query: 163 SHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVI 222
           S+FVVELTYNYGV  YDIGTGFGHF I+ +DV+K V+ V+AKGG VTREPGPVKGG +VI
Sbjct: 66  SNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGGGSVI 125

Query: 223 AFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
           AF++DPDGY FEL++RGPTPEPLCQVMLRVGDLDRA+ F +KA GM LLR+ + P+Y
Sbjct: 126 AFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPEY 182

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Brassica oleracea var. gemmifera (taxid: 178616)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC83|LGUL_SHIFL Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1

 Score =  165 bits (417), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 73/125 (58%), Positives = 97/125 (77%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 234 ELLER 238
           EL+E 
Sbjct: 122 ELIEE 126

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Shigella flexneri (taxid: 623)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC81|LGUL_ECOLI Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1

 Score =  165 bits (417), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 73/125 (58%), Positives = 97/125 (77%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 234 ELLER 238
           EL+E 
Sbjct: 122 ELIEE 126

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli (strain K12) (taxid: 83333)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC82|LGUL_ECO57 Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1

 Score =  165 bits (417), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 73/125 (58%), Positives = 97/125 (77%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 234 ELLER 238
           EL+E 
Sbjct: 122 ELIEE 126

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli O157:H7 (taxid: 83334)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q55595|LGUL_SYNY3 Probable lactoylglutathione lyase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=gloA PE=3 SV=1

 Score =  164 bits (415), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 73/123 (59%), Positives = 95/123 (77%)

Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG 174
           +LH + RVGDLDK+++FY + LGM LLRK+D P   +T AF+GYG E  + V+ELT+N+G
Sbjct: 3   LLHTMIRVGDLDKSLQFYCDILGMNLLRKKDYPSGEFTLAFVGYGKESENAVIELTHNWG 62

Query: 175 VDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 234
            DKYD+G GFGH  + VED+  T D ++ KGGKV REPGP+K G TVIAF+EDPDGYK E
Sbjct: 63  TDKYDLGNGFGHIALGVEDIYSTCDKIRDKGGKVVREPGPMKHGTTVIAFVEDPDGYKIE 122

Query: 235 LLE 237
           L++
Sbjct: 123 LIQ 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q2|LGUL_SALTY Lactoylglutathione lyase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gloA PE=3 SV=1

 Score =  162 bits (409), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 95/124 (76%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT  LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GV+ YD+G  +GH  ++V++ A+  + ++  GG VTRE GPVKGG+T+IAF+EDPDGYK 
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 234 ELLE 237
           EL+E
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q3|LGUL_SALTI Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1

 Score =  162 bits (409), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 95/124 (76%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT  LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GV+ YD+G  +GH  ++V++ A+  + ++  GG VTRE GPVKGG+T+IAF+EDPDGYK 
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 234 ELLE 237
           EL+E
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhi (taxid: 90370)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P44638|LGUL_HAEIN Lactoylglutathione lyase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=gloA PE=1 SV=1

 Score =  161 bits (408), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 76/132 (57%), Positives = 97/132 (73%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           ++LH + RVGDLD++IKFY + LGM+LLR  + PE +YT AFLGY   +S   +ELTYN+
Sbjct: 2   QILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY+ GT +GH  I V+D+  T + V+A GG VTRE GPVKGG+TVIAF+EDPDGYK 
Sbjct: 62  GVDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFVEDPDGYKI 121

Query: 234 ELLERGPTPEPL 245
           E +E   T   L
Sbjct: 122 EFIENKSTKSGL 133

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	292
449530241	354	PREDICTED: probable lactoylglutathione l	0.910	0.751	0.710	1e-111
449443163	362	PREDICTED: probable lactoylglutathione l	0.910	0.734	0.710	1e-111
296081860	359	unnamed protein product [Vitis vinifera]	0.791	0.643	0.824	1e-110
225429965	364	PREDICTED: probable lactoylglutathione l	0.791	0.634	0.824	1e-110
359484559	362	PREDICTED: probable lactoylglutathione l	0.907	0.732	0.697	1e-109
225445150	355	PREDICTED: probable lactoylglutathione l	0.808	0.664	0.777	1e-107
224119744	355	predicted protein [Populus trichocarpa]	0.876	0.721	0.708	1e-107
255550986	389	lactoylglutathione lyase, putative [Rici	0.787	0.591	0.773	1e-106
255546389	369	lactoylglutathione lyase, putative [Rici	0.760	0.601	0.814	1e-105
357520937	347	Lactoylglutathione lyase [Medicago trunc	0.876	0.737	0.644	1e-105

>gi|449530241|ref|XP_004172104.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like [Cucumis sativus]

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/280 (71%), Positives = 232/280 (82%), Gaps = 14/280 (5%)

Query: 1   MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLG 60
           M+R  P+AS S            PS S+ + + F  +   G ++S  ++T+RR+AL QLG
Sbjct: 1   MVRITPMASFSVR----------PSLSAFRFAGFSRS---GLSLS-SFNTTRRIALLQLG 46

Query: 61  AAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVY 120
           +A+PQS +FG KA  +LR EGS I  + +GN A  S + + +N+LDWVK DKRRMLHVVY
Sbjct: 47  SAVPQSQYFGLKAFDMLRGEGSNIGMTVAGNAAQASTSSSSENLLDWVKQDKRRMLHVVY 106

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
           RVGDLDKTIKFYTECLGMKLLRKRDIPE++YTNAFLG+GPEDSHFV+ELTYNYGVDKYDI
Sbjct: 107 RVGDLDKTIKFYTECLGMKLLRKRDIPEEKYTNAFLGFGPEDSHFVIELTYNYGVDKYDI 166

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP 240
           GT FGHFGIAVEDV KTV+L+KAKGGKVTRE GPVKGG TVIAF+EDPDGYKFEL+ERGP
Sbjct: 167 GTAFGHFGIAVEDVYKTVELIKAKGGKVTREAGPVKGGRTVIAFVEDPDGYKFELIERGP 226

Query: 241 TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           TPEPLCQVMLRVGDLDR+I+FYKKA+GMELLRKRDNPDYK
Sbjct: 227 TPEPLCQVMLRVGDLDRSIDFYKKAYGMELLRKRDNPDYK 266

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443163|ref|XP_004139350.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like [Cucumis sativus]

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/280 (71%), Positives = 232/280 (82%), Gaps = 14/280 (5%)

Query: 1   MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLG 60
           M+R  P+AS S            PS S+ + + F  +   G ++S  ++T+RR+AL QLG
Sbjct: 1   MVRITPMASFSVR----------PSLSAFRFAGFSRS---GLSLS-SFNTTRRIALLQLG 46

Query: 61  AAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVY 120
           +A+PQS +FG KA  +LR EGS I  + +GN A  S + + +N+LDWVK DKRRMLHVVY
Sbjct: 47  SAVPQSQYFGLKAFDMLRGEGSNIGMTVAGNAAQASTSSSSENLLDWVKQDKRRMLHVVY 106

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
           RVGDLDKTIKFYTECLGMKLLRKRDIPE++YTNAFLG+GPEDSHFV+ELTYNYGVDKYDI
Sbjct: 107 RVGDLDKTIKFYTECLGMKLLRKRDIPEEKYTNAFLGFGPEDSHFVIELTYNYGVDKYDI 166

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP 240
           GT FGHFGIAVEDV KTV+L+KAKGGKVTRE GPVKGG TVIAF+EDPDGYKFEL+ERGP
Sbjct: 167 GTAFGHFGIAVEDVYKTVELIKAKGGKVTREAGPVKGGRTVIAFVEDPDGYKFELIERGP 226

Query: 241 TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           TPEPLCQVMLRVGDLDR+I+FYKKA+GMELLRKRDNPDYK
Sbjct: 227 TPEPLCQVMLRVGDLDRSIDFYKKAYGMELLRKRDNPDYK 266

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081860|emb|CBI20865.3| unnamed protein product [Vitis vinifera]

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 192/233 (82%), Positives = 210/233 (90%), Gaps = 2/233 (0%)

Query: 48  YSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDW 107
           +++SRRLALF LG AIPQS   G K LKL R EG+ +EA T+GNMA  +  V+E NVL+W
Sbjct: 33  FTSSRRLALFHLGTAIPQSELLGGKTLKLFRMEGNMLEAGTAGNMAQAA--VSEGNVLEW 90

Query: 108 VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV 167
            K+DKRRMLHVVYRVG+LDKT+KFYTECLGMKLLR+ DIPE+RY NAFLGYGPEDSHFVV
Sbjct: 91  AKTDKRRMLHVVYRVGNLDKTMKFYTECLGMKLLRRCDIPEERYANAFLGYGPEDSHFVV 150

Query: 168 ELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIED 227
           ELTYNYGVDK DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGG TVIAF+ED
Sbjct: 151 ELTYNYGVDKIDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGKTVIAFVED 210

Query: 228 PDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           PDGYKFELLER PTPEPLCQVMLRVGDLDR+I FY+KAFGMELLRKRDNP+YK
Sbjct: 211 PDGYKFELLEREPTPEPLCQVMLRVGDLDRSIKFYEKAFGMELLRKRDNPEYK 263

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429965|ref|XP_002283968.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like [Vitis vinifera]

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 192/233 (82%), Positives = 210/233 (90%), Gaps = 2/233 (0%)

Query: 48  YSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDW 107
           +++SRRLALF LG AIPQS   G K LKL R EG+ +EA T+GNMA  +  V+E NVL+W
Sbjct: 38  FTSSRRLALFHLGTAIPQSELLGGKTLKLFRMEGNMLEAGTAGNMAQAA--VSEGNVLEW 95

Query: 108 VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV 167
            K+DKRRMLHVVYRVG+LDKT+KFYTECLGMKLLR+ DIPE+RY NAFLGYGPEDSHFVV
Sbjct: 96  AKTDKRRMLHVVYRVGNLDKTMKFYTECLGMKLLRRCDIPEERYANAFLGYGPEDSHFVV 155

Query: 168 ELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIED 227
           ELTYNYGVDK DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGG TVIAF+ED
Sbjct: 156 ELTYNYGVDKIDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGKTVIAFVED 215

Query: 228 PDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           PDGYKFELLER PTPEPLCQVMLRVGDLDR+I FY+KAFGMELLRKRDNP+YK
Sbjct: 216 PDGYKFELLEREPTPEPLCQVMLRVGDLDRSIKFYEKAFGMELLRKRDNPEYK 268

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359484559|ref|XP_003633121.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like isoform 2 [Vitis vinifera] gi|297738782|emb|CBI28027.3| unnamed protein product [Vitis vinifera]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/281 (69%), Positives = 227/281 (80%), Gaps = 16/281 (5%)

Query: 1   MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLG 60
           M+R +P+A+    ++S++   S  S+    LS F +              SR +    +G
Sbjct: 1   MVRIIPMATSFRPSLSSFG-FSTSSRLGFPLSTFNI--------------SRTVTSLHVG 45

Query: 61  AAIPQSHFFGAKALKLLRA-EGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVV 119
           +AIPQS  FG  A KLLR  EG+ +  + +GN+A  S +  ++NVL+WVK DKRRMLHVV
Sbjct: 46  SAIPQSQIFGLNASKLLRGGEGNAMGFNATGNIAHASTSAAQENVLEWVKKDKRRMLHVV 105

Query: 120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD 179
           YRVGDLD+TIKFYTECLGMKLLR+RDIPE+RYTNAFLGYGPEDSHFV+ELTYNYGVDKYD
Sbjct: 106 YRVGDLDRTIKFYTECLGMKLLRRRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYD 165

Query: 180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 239
           IG GFGHFGIAVEDV KTVDL+KAKGGKVTREPGPVKGG+TVIAFIEDPDGYKFELLERG
Sbjct: 166 IGAGFGHFGIAVEDVTKTVDLIKAKGGKVTREPGPVKGGSTVIAFIEDPDGYKFELLERG 225

Query: 240 PTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           PTPEPLCQVMLRVGDLDR+INFY+KAFGMELLRKRDNP+YK
Sbjct: 226 PTPEPLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNPEYK 266

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445150|ref|XP_002284023.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like isoform 1 [Vitis vinifera]

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 189/243 (77%), Positives = 211/243 (86%), Gaps = 7/243 (2%)

Query: 45  SYCYSTSRRLAL----FQLG--AAIPQSHFFGAKALKLLRA-EGSTIEASTSGNMAPTSN 97
           S+ +STS RL      F +    +IPQS  FG  A KLLR  EG+ +  + +GN+A  S 
Sbjct: 17  SFGFSTSSRLGFPLSTFNISRTLSIPQSQIFGLNASKLLRGGEGNAMGFNATGNIAHAST 76

Query: 98  TVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLG 157
           +  ++NVL+WVK DKRRMLHVVYRVGDLD+TIKFYTECLGMKLLR+RDIPE+RYTNAFLG
Sbjct: 77  SAAQENVLEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRRRDIPEERYTNAFLG 136

Query: 158 YGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG 217
           YGPEDSHFV+ELTYNYGVDKYDIG GFGHFGIAVEDV KTVDL+KAKGGKVTREPGPVKG
Sbjct: 137 YGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVEDVTKTVDLIKAKGGKVTREPGPVKG 196

Query: 218 GNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP 277
           G+TVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDR+INFY+KAFGMELLRKRDNP
Sbjct: 197 GSTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNP 256

Query: 278 DYK 280
           +YK
Sbjct: 257 EYK 259

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119744|ref|XP_002331150.1| predicted protein [Populus trichocarpa] gi|222873233|gb|EEF10364.1| predicted protein [Populus trichocarpa]

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 199/281 (70%), Positives = 223/281 (79%), Gaps = 25/281 (8%)

Query: 1   MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLG 60
           M+R +P+ S SS+  S+Y          L  S F   N          + SRR A   L 
Sbjct: 1   MVRIIPMVS-SSIRPSSY----------LTCSSFMFCN--------ACAPSRRFAY--LA 39

Query: 61  AAIPQSHFFGAKAL-KLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVV 119
            A+PQSHFFG KA  K+ R E  TI    +GNMA  S   T++++L+WVK DKRRMLHVV
Sbjct: 40  TAVPQSHFFGLKASSKIWRGESRTI---ATGNMAQASTAATQESLLEWVKKDKRRMLHVV 96

Query: 120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD 179
           YRVGDLD+TIKFYTECLGMKLLRKRDIPE+RYTNAFLGYGPEDSHFV+ELTYNYGVD YD
Sbjct: 97  YRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDSYD 156

Query: 180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 239
           IG GFGHFGIAVEDVAKTV+L+KAKGGKV REPGPVKGG+TVIAFIEDPDGYKFELLERG
Sbjct: 157 IGAGFGHFGIAVEDVAKTVELIKAKGGKVNREPGPVKGGSTVIAFIEDPDGYKFELLERG 216

Query: 240 PTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           PTPEPLCQVMLRVGDLDR+INFY+KAFGM+LLRKRDNP+YK
Sbjct: 217 PTPEPLCQVMLRVGDLDRSINFYEKAFGMKLLRKRDNPEYK 257

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550986|ref|XP_002516541.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223544361|gb|EEF45882.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 178/230 (77%), Positives = 209/230 (90%)

Query: 51  SRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKS 110
           SRRLALFQLGAA+P+SH  G +A KLLR +G+T EASTS  MA  S  + EQNVL+WV +
Sbjct: 64  SRRLALFQLGAALPESHLLGGRASKLLRVDGNTSEASTSSKMASMSTALAEQNVLEWVSN 123

Query: 111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELT 170
           DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKR+IPE+RY+NAFLGYGPE+S+F VELT
Sbjct: 124 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRNIPEERYSNAFLGYGPEESNFTVELT 183

Query: 171 YNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
           YNYG+DKY+IG GFGHFGIAVEDV KTV+LVKAKGG++TR+ GPVKGG ++IA+++DPDG
Sbjct: 184 YNYGIDKYNIGNGFGHFGIAVEDVVKTVNLVKAKGGRITRDSGPVKGGGSIIAYVQDPDG 243

Query: 231 YKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           Y FELLERGPTPEPLCQVMLRVGDL+R++NFYKKAFG++LLRKRD+P+ K
Sbjct: 244 YTFELLERGPTPEPLCQVMLRVGDLERSVNFYKKAFGLQLLRKRDDPESK 293

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546389|ref|XP_002514254.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223546710|gb|EEF48208.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/227 (81%), Positives = 203/227 (89%), Gaps = 5/227 (2%)

Query: 59  LGAAIPQSHFFGAKAL-KLLRAEGST----IEASTSGNMAPTSNTVTEQNVLDWVKSDKR 113
           LG+A+PQSHFFG KA  K  R E ST    +  + +GNMA  S   ++++ L+W KSDKR
Sbjct: 47  LGSAVPQSHFFGLKATSKPWRGEISTSSSGLGVAATGNMAQASTFASQESALEWAKSDKR 106

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           RMLHVVYRVGDLD+TIKFYTECLGMKLLRKRDIPE+RYTNAFLGYGPEDSHFV+ELTYNY
Sbjct: 107 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNY 166

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKYDIGT FGHFGIAVEDVAKTV+L+KAKGGKVTREP PVKGG TVIAFIEDPDGYKF
Sbjct: 167 GVDKYDIGTAFGHFGIAVEDVAKTVELIKAKGGKVTREPAPVKGGKTVIAFIEDPDGYKF 226

Query: 234 ELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           ELLERGPTPEPLCQVMLRVGDLDR+INFY+KAFGMELLRKRDNP+YK
Sbjct: 227 ELLERGPTPEPLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNPEYK 273

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357520937|ref|XP_003630757.1| Lactoylglutathione lyase [Medicago truncatula] gi|355524779|gb|AET05233.1| Lactoylglutathione lyase [Medicago truncatula]

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/287 (64%), Positives = 220/287 (76%), Gaps = 31/287 (10%)

Query: 1   MLRTLPIASPSSL-TVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQL 59
           M+R +PIAS S L T+S +N+T                               R++    
Sbjct: 1   MVRVIPIASSSILPTLSLFNRTP------------------------------RISFSHF 30

Query: 60  GAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVV 119
             A+PQSH FG KA +L +  G++++  +SGN++ +    + +NVL+WVK DKRRMLHVV
Sbjct: 31  STAVPQSHNFGLKACRLFKQNGNSLKVMSSGNVSSSVTAASPENVLEWVKQDKRRMLHVV 90

Query: 120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD 179
           YRVGDLD+TIKFYTECLGMKLLRKRDIPE+RYTNAFLGYGPEDSHFV+ELTYNYGVDKYD
Sbjct: 91  YRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYD 150

Query: 180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 239
           IGT FGHFGIAV+D+ KTV+L++AKGGK+TREPGPVKGG TVIAF+EDPDGYKFELLERG
Sbjct: 151 IGTAFGHFGIAVDDITKTVELIRAKGGKITREPGPVKGGKTVIAFVEDPDGYKFELLERG 210

Query: 240 PTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLL 286
           PTPEPLCQVMLRVGDL+R+I FY+KAFGMELLR RDNPD K    +L
Sbjct: 211 PTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPDNKYTIAML 257

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	292
TAIR|locus:2019574	350	AT1G67280 [Arabidopsis thalian	0.791	0.66	0.741	3.4e-93
UNIPROTKB|P0AC81	135	gloA "GloA" [Escherichia coli	0.424	0.918	0.588	7.8e-39
UNIPROTKB|Q9KT93	138	gloA "Probable lactoylglutathi	0.424	0.898	0.588	1e-36
TIGR_CMR|VC_1010	138	VC_1010 "lactoylglutathione ly	0.424	0.898	0.588	1e-36
DICTYBASE|DDB_G0291265	136	gloA "glyoxylase I" [Dictyoste	0.424	0.911	0.572	2.1e-36
TIGR_CMR|SO_2044	136	SO_2044 "lactoylglutathione ly	0.424	0.911	0.552	2.4e-35
ZFIN|ZDB-GENE-040912-38	298	glod4 "glyoxalase domain conta	0.537	0.526	0.353	1e-22
RGD|1307010	298	Glod4 "glyoxalase domain conta	0.582	0.570	0.312	2.7e-20
MGI|MGI:1914451	298	Glod4 "glyoxalase domain conta	0.554	0.543	0.326	1.9e-19
FB|FBgn0031143	293	CG1532 [Drosophila melanogaste	0.523	0.522	0.316	5.1e-19

TAIR|locus:2019574 AT1G67280 [Arabidopsis thaliana (taxid:3702)]

 Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
 Identities = 178/240 (74%), Positives = 200/240 (83%)

Query:    47 CYSTSRRLALFQLGAA------IPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVT 100
             C+S S R  +  L         +PQS  FG  + KLLR   + +  + SG  A  +   T
Sbjct:    18 CFSDSPRFPISLLSRNLSRTLHVPQSQLFGLTSHKLLRRSVNCLGVAESGKAAQAT---T 74

Query:   101 EQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGP 160
             + ++L WVK+DKRRMLHVVYRVGD+D+TIKFYTECLGMKLLRKRDIPE++YTNAFLGYGP
Sbjct:    75 QDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGP 134

Query:   161 EDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNT 220
             EDSHFV+ELTYNYGVDKYDIG GFGHFGIAV+DVAKTV+LVKAKGGKV+REPGPVKGG T
Sbjct:   135 EDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKT 194

Query:   221 VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
             VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAI FY+KAFGMELLR RDNP+YK
Sbjct:   195 VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYK 254

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA

UNIPROTKB|P0AC81 gloA "GloA" [Escherichia coli K-12 (taxid:83333)]

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 73/124 (58%), Positives = 97/124 (78%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
             R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct:     2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query:   174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
             GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct:    62 GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query:   234 ELLE 237
             EL+E
Sbjct:   122 ELIE 125

GO:0016151 "nickel cation binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

UNIPROTKB|Q9KT93 gloA "Probable lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
             R+LH + RVGDLDK+I+FYT+ +GM LLRK +  E +YT AFLGYG E    V+ELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:   174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
             GV  Y+ G  +GH  I V+D+  T D +KA GG VTREPGPVKGG T IAF++DPDGY  
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   234 ELLE 237
             EL++
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

TIGR_CMR|VC_1010 VC_1010 "lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
             R+LH + RVGDLDK+I+FYT+ +GM LLRK +  E +YT AFLGYG E    V+ELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:   174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
             GV  Y+ G  +GH  I V+D+  T D +KA GG VTREPGPVKGG T IAF++DPDGY  
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   234 ELLE 237
             EL++
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

DICTYBASE|DDB_G0291265 gloA "glyoxylase I" [Dictyostelium discoideum (taxid:44689)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 71/124 (57%), Positives = 96/124 (77%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
             R+LH + RVG+L+K+++FY + LGMKLLRK +  E +YT AF+GY  ED + V+ELTYN+
Sbjct:     3 RILHTMLRVGNLEKSLQFYIDVLGMKLLRKSENVEYKYTLAFVGYTNEDENAVIELTYNW 62

Query:   174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
             GV+KY++GT FGH  I V+DV +TV+ ++  GGKV RE  PV GG TVIAF+EDPD YK 
Sbjct:    63 GVEKYELGTAFGHIAIGVDDVYETVERIRKSGGKVAREAAPVLGGTTVIAFVEDPDNYKI 122

Query:   234 ELLE 237
             EL++
Sbjct:   123 ELIQ 126

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006749 "glutathione metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=IEA

TIGR_CMR|SO_2044 SO_2044 "lactoylglutathione lyase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 69/125 (55%), Positives = 93/125 (74%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS-HFVVELTYN 172
             ++LH + RVG+L+++I FYT+ LGMKLLR  + PE +Y+ AF+GYG E +   V+ELTYN
Sbjct:     3 QLLHTMIRVGNLERSIAFYTQVLGMKLLRTSENPEYKYSLAFVGYGEESTGQAVIELTYN 62

Query:   173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             +G +KYD+GTGFGH  I  +D+    + + A GGKVTR PGPV GG T IAF+EDPDGYK
Sbjct:    63 WGTEKYDLGTGFGHIAIGDDDIYARCEAIAAAGGKVTRAPGPVAGGTTEIAFVEDPDGYK 122

Query:   233 FELLE 237
              E ++
Sbjct:   123 IEFIQ 127

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

ZFIN|ZDB-GENE-040912-38 glod4 "glyoxalase domain containing 4" [Danio rerio (taxid:7955)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 64/181 (35%), Positives = 101/181 (55%)

Query:   113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI----------PED-RYTNAFLGYGPE 161
             +R LH V++VGD  KT  FY + LGMK+LR  +           P D +++   +G+GPE
Sbjct:     4 KRALHFVFKVGDRTKTATFYRDVLGMKILRHEEFEEGCKATCNGPYDGKWSKTMVGFGPE 63

Query:   162 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 221
             D HFV ELTYNYGV +Y +G  F   G+ ++  A+ V   K     +T+       G+ +
Sbjct:    64 DDHFVAELTYNYGVGEYRLGNDF--LGLTLQS-AQAVSNAKRLNWPLTQV------GDCL 114

Query:   222 IAFIEDPDGYKFELLERG-PTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
                 E P GY+F L+++  P  +P+ +V L V DL R+++++    GM+++ K  N D K
Sbjct:   115 Y-MTEAPGGYRFYLIDKEQPNSDPVQKVSLAVSDLQRSVHYWSGLLGMKVIEK--NEDKK 171

Query:   281 V 281
             +
Sbjct:   172 I 172

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

RGD|1307010 Glod4 "glyoxalase domain containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 60/192 (31%), Positives = 101/192 (52%)

Query:   113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI----------PED-RYTNAFLGYGPE 161
             RR LH V++VG+  +T+ F+ + LGM++LR  +           P D +++   +G+GPE
Sbjct:     4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 63

Query:   162 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 221
             D HFV ELTYNYG+  Y +G  F   G+ +   A +  +  A+     R   P+      
Sbjct:    64 DDHFVAELTYNYGIGDYKLGNDF--MGLTL---ASSQAVSNAR-----RLEWPLSKVAEG 113

Query:   222 IAFIEDPDGYKFELLERGPTP-EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
             +   E P GYKF L +R P+  +P+ +V L V DL +++N++    GM++  + +   + 
Sbjct:   114 VFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKKWA 173

Query:   281 VNSYLLPPNKLQ 292
             +  Y     KL+
Sbjct:   174 LLGYADDQCKLE 185

GO:0005739 "mitochondrion" evidence=IEA;ISO

MGI|MGI:1914451 Glod4 "glyoxalase domain containing 4" [Mus musculus (taxid:10090)]

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 60/184 (32%), Positives = 97/184 (52%)

Query:   113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI----------PED-RYTNAFLGYGPE 161
             RR LH V++V +  +T+ F+ + LGM++LR  +           P D +++   +G+GPE
Sbjct:     4 RRALHFVFKVKNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 63

Query:   162 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 221
             D HFV ELTYNYG+  Y +G  F   GI +   A +  +  A+  K+      V  G   
Sbjct:    64 DDHFVAELTYNYGIGDYKLGNDF--MGITL---ASSQAVSNAR--KLEWPLSKVAEG--- 113

Query:   222 IAFIEDPDGYKFELLERGPTP-EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
             I   E P GYKF L +R P+  +P+ +V L V DL +++N++    GM++  + +     
Sbjct:   114 IFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKQRA 173

Query:   281 VNSY 284
             +  Y
Sbjct:   174 LLGY 177

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0008150 "biological_process" evidence=ND

FB|FBgn0031143 CG1532 [Drosophila melanogaster (taxid:7227)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 55/174 (31%), Positives = 91/174 (52%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----------DRYTNAFLGYGPED 162
             R LH V+++GD  K   F+ + LGM +LR  +  E           +R++   +GYGPE 
Sbjct:    12 RALHYVFKIGDRAKNAFFFRQILGMTVLRHEEFKEGCDAACNGPYDNRWSKTMVGYGPES 71

Query:   163 SHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVI 222
             SHFV+ELTYNYGV  Y++G  FG   I  +D+   +         VT+  G  K G+   
Sbjct:    72 SHFVIELTYNYGVSSYEMGNDFGGVTIHSKDI---LSRAAEHSYPVTQVSG--KAGS--- 123

Query:   223 AFIEDPDGYKFELLERGP-TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRD 275
               +  PDGYKF ++++   + +P+  V L V +L  +  ++     +++L + +
Sbjct:   124 -LLTSPDGYKFYVIDQASASSDPVQSVELNVSNLQNSRKYWHDLLQLKVLEENE 176

GO:0022008 "neurogenesis" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8W593	LGUC_ARATH	4, ., 4, ., 1, ., 5	0.7416	0.7910	0.66	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.4.1	LOW CONFIDENCE prediction!
4th Layer	4.4.1.5	0.824
3rd Layer	2.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.01570036	lactoylglutathione lyase (EC-4.4.1.5) (356 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_1250018	hydroxyacylglutathione hydrolase (EC-3.1.2.6) (259 aa)						•	•		0.907
	gw1.XI.471.1	tryptophan synthase, beta chain (EC-4.2.1.20) (398 aa)						•			0.800
	gw1.XI.1757.1	tryptophan synthase, beta chain (EC-4.2.1.20) (378 aa)						•			0.800
	gw1.123.110.1	hypothetical protein (461 aa)						•			0.800
	fgenesh4_pg.C_LG_XIII000422	tryptophan synthase, beta chain (EC-4.2.1.20) (410 aa)						•			0.800
	eugene3.00120775	hypothetical protein (752 aa)						•			0.800
	estExt_fgenesh4_pg.C_LG_XV0575	hypothetical protein (700 aa)						•			0.800
	estExt_fgenesh4_pg.C_LG_V1322	tryptophan synthase (EC-4.2.1.20) (310 aa)						•			0.800
	estExt_fgenesh4_pg.C_LG_II0422	SubName- Full=Putative uncharacterized protein; (310 aa)						•			0.800
	estExt_fgenesh4_pg.C_280257	threonine deaminase (EC-4.3.1.19) (543 aa)						•			0.800

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	292
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	1e-143
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	4e-87
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	2e-60
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	2e-49
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	3e-44
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	1e-32
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	4e-29
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	8e-25
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	9e-19
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	3e-17
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	1e-16
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	5e-15
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	9e-12
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	7e-11
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	7e-10
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	1e-09
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	3e-09
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	3e-09
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	3e-09
TIGR02295	294	TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-di	7e-09
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	7e-09
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	1e-08
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	1e-08
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	2e-08
cd08362	120	cd08362, BphC5-RrK37_N_like, N-terminal, non-catal	7e-08
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	1e-07
cd07267	113	cd07267, THT_Oxygenase_N, N-terminal domain of 2,4	1e-06
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	3e-06
cd08348	134	cd08348, BphC2-C3-RGP6_C_like, The single-domain 2	3e-06
cd07251	120	cd07251, Glo_EDI_BRP_like_10, This conserved domai	5e-06
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	1e-05
cd08349	112	cd08349, BLMA_like, Bleomycin binding protein (BLM	1e-05
cd07263	120	cd07263, Glo_EDI_BRP_like_16, This conserved domai	1e-05
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	2e-05
cd08345	113	cd08345, Fosfomycin_RP, Fosfomycin resistant prote	2e-05
cd07254	120	cd07254, Glo_EDI_BRP_like_20, This conserved domai	3e-05
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	3e-05
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	4e-05
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	4e-05
cd08360	134	cd08360, MhqB_like_C, C-terminal domain of Burkhol	5e-05
cd07237	154	cd07237, BphC1-RGP6_C_like, C-terminal domain of 2	7e-05
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	7e-05
TIGR02295	294	TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-di	8e-05
cd07244	121	cd07244, FosA, FosA, a Fosfomycin resistance prote	9e-05
TIGR01263	353	TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygen	1e-04
cd08343	131	cd08343, ED_TypeI_classII_C, C-terminal domain of	1e-04
cd08342	136	cd08342, HPPD_N_like, N-terminal domain of 4-hydro	2e-04
TIGR03211	303	TIGR03211, catechol_2_3, catechol 2,3 dioxygenase	3e-04
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	4e-04
cd07266	121	cd07266, HPCD_N_class_II, N-terminal domain of 3,4	4e-04
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	8e-04
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	0.002
cd07239	144	cd07239, BphC5-RK37_C_like, C-terminal, catalytic,	0.002
pfam13468	174	pfam13468, Glyoxalase_3, Glyoxalase-like domain	0.003
cd07246	123	cd07246, Glo_EDI_BRP_like_8, This conserved domain	0.003
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	0.004

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  404 bits (1039), Expect = e-143
 Identities = 159/190 (83%), Positives = 177/190 (93%)

Query: 91  NMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR 150
             A  S     +++L+W K DKRRMLHVVYRVGDLD+TIKFYTECLGMKLLRKRDIPE++
Sbjct: 1   ASAAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEK 60

Query: 151 YTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTR 210
           YTNAFLGYGPEDS+FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV+LVKAKGGKVTR
Sbjct: 61  YTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTR 120

Query: 211 EPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMEL 270
           EPGPVKGG +VIAF++DPDGYKFEL++RGPTPEPLCQVMLRVGDLDR+I FY+KAFGM+L
Sbjct: 121 EPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAFGMKL 180

Query: 271 LRKRDNPDYK 280
           LRKRDNP+YK
Sbjct: 181 LRKRDNPEYK 190

Length = 286

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  256 bits (656), Expect = 4e-87
 Identities = 87/141 (61%), Positives = 107/141 (75%)

Query: 107 WVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV 166
             K+ KRR+LH + RVGDLDK++ FYTE LGMKLLRKRD PE +++ AFLGYG E S  V
Sbjct: 10  DPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAV 69

Query: 167 VELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIE 226
           +ELT+N+G +KYD+G GFGH  I V+DV K  + V+A GG V REPGPVKGG TVIAF+E
Sbjct: 70  IELTHNWGTEKYDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVE 129

Query: 227 DPDGYKFELLERGPTPEPLCQ 247
           DPDGYK EL++R  T + L  
Sbjct: 130 DPDGYKIELIQRKSTKDGLGN 150

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  187 bits (477), Expect = 2e-60
 Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 3/123 (2%)

Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG 174
            LH + RV DL+K++ FYT+ LGMKLLR++D PE ++T  FLGY  EDS  V+ELTYN+G
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG 60

Query: 175 VD-KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
            +  YD G GFGH   AV+DV    + ++  G +VT+ PG        IAFI+DPDGY  
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKG--IAFIKDPDGYWI 118

Query: 234 ELL 236
           EL+
Sbjct: 119 ELI 121

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  160 bits (405), Expect = 2e-49
 Identities = 70/117 (59%), Positives = 91/117 (77%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
           RVGDL ++I FYT  LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+GVDKY++
Sbjct: 3   RVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYEL 62

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE 237
           GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK EL+E
Sbjct: 63  GTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 119

Length = 129

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  151 bits (383), Expect = 3e-44
 Identities = 66/119 (55%), Positives = 82/119 (68%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
            +  V+ RVGDLD++IKFY +  GMKLLRKRD PE +YT A +GYGPED   V+ELTYNY
Sbjct: 154 PLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNY 213

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
           GV +Y  G  +    I  +DV KT + +K  GGK+TREPGP+ G NT I    DPDG+K
Sbjct: 214 GVTEYTKGNAYAQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWK 272

Length = 286

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score =  115 bits (291), Expect = 1e-32
 Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 8/125 (6%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+ HV  RVGDL+K++ FYT+ LG KL+ + D  E    +AF          V+EL  N 
Sbjct: 1   RIDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFF----TAGGRVLELLLNE 56

Query: 174 GVDKYDIGT---GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
                  G           +V+DV    D +KA G ++ REPG    G     +  DPDG
Sbjct: 57  TPPPAAAGFGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGRYS-YFRDPDG 115

Query: 231 YKFEL 235
              EL
Sbjct: 116 NLIEL 120

Length = 120

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  107 bits (268), Expect = 4e-29
 Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 21/137 (15%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI----------PED-RYTNAFLGYGPE 161
           RR LH V++VG+ +KTIKFY E LGMK+LR  +           P D +++   +GYGPE
Sbjct: 1   RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPE 60

Query: 162 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 221
           D HFVVELTYNYG+  Y++G  F    I  +                 +   PV      
Sbjct: 61  DDHFVVELTYNYGIGDYELGNDFLGITIHSKQAVS----------NAKKHNWPVTEVEDG 110

Query: 222 IAFIEDPDGYKFELLER 238
           +  ++ P GYKF L+++
Sbjct: 111 VYEVKAPGGYKFYLIDK 127

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 95.6 bits (238), Expect = 8e-25
 Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           HV   V DL+  + FY + LG ++L +     +    AFL  G       +EL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAEF---AFLRLG----GTRLEL-FEGDEP 52

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
               G G  H    V+DV   V+ +KA G ++   P     G  V A+  DPDG   EL
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGRV-AYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 81.4 bits (201), Expect = 9e-19
 Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 31/152 (20%)

Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGY-----GPEDS------ 163
           M   ++R+ D   ++ FY+  LGM LL++ D PE +++  FLGY      P D       
Sbjct: 28  MQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVW 87

Query: 164 ----HFVVELTYNYGVDK------YDIG----TGFGHFGIAVEDVAKTVDLVKAKGGKVT 209
                  +ELT+N+G +       Y  G     GFGH GI V+DV K  +  +  G +  
Sbjct: 88  TFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFV 147

Query: 210 REP--GPVKGGNTVIAFIEDPDGYKFELLERG 239
           ++P  G +KG    +AFI+DPDGY  E+ +  
Sbjct: 148 KKPDDGKMKG----LAFIKDPDGYWIEIFDLK 175

Length = 185

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 78.5 bits (193), Expect = 3e-17
 Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 31/150 (20%)

Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGY-----GPED------- 162
           M   +YR+ D   ++ FY+  LGM LL++ D PE +++  F+GY      P D       
Sbjct: 76  MQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVW 135

Query: 163 ---SHFVVELTYNYGVDK------YDIGT----GFGHFGIAVEDVAKTVDLVKAKGGKVT 209
                  +ELT+N+G +       Y  G     GFGH GI V+DV K  +  +  G +  
Sbjct: 136 TFGQKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFV 195

Query: 210 REP--GPVKGGNTVIAFIEDPDGYKFELLE 237
           ++P  G +KG    IAFI+DPDGY  E+ +
Sbjct: 196 KKPNDGKMKG----IAFIKDPDGYWIEIFD 221

Length = 233

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 74.4 bits (182), Expect = 1e-16
 Identities = 31/141 (21%), Positives = 47/141 (33%), Gaps = 19/141 (13%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYG-----------PE 161
             + HV   V DL+ +I FYT+ LG++L++      D      L +              
Sbjct: 1   MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFF 60

Query: 162 DSHFVVELTYNYGV-DKYDIGT-GFGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVK 216
                    +   V      G  G GH    V+D A     +  +   G ++        
Sbjct: 61  GFEGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRG 120

Query: 217 GGNTVIAFIEDPDGYKFELLE 237
           G   V  +  DPDG   EL  
Sbjct: 121 G---VHVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 69.4 bits (170), Expect = 5e-15
 Identities = 30/115 (26%), Positives = 43/115 (37%), Gaps = 8/115 (6%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
            V DL+    FY E LG ++       +  Y    LG       F+  +      +    
Sbjct: 2   PVSDLEAARAFYEELLGFEVEE----EDGEYAEFRLGLVLALGGFIELIGLP---EPDAP 54

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
           G G  H    V+D+   V  +KA GG +   P     G     ++ DPDG   EL
Sbjct: 55  GGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWGGR-EFYVRDPDGNLIEL 108

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score = 61.4 bits (149), Expect = 9e-12
 Identities = 22/42 (52%), Positives = 30/42 (71%)

Query: 245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLL 286
           L   MLRVGDLD++++FY +  GM+LLRKRD P+ K +   L
Sbjct: 18  LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFL 59

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 58.3 bits (142), Expect = 7e-11
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLL 286
             MLRV DL+++++FY    GM+LLR++D P+ K     L
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFL 42

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 55.3 bits (134), Expect = 7e-10
 Identities = 28/120 (23%), Positives = 36/120 (30%), Gaps = 17/120 (14%)

Query: 122 VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG 181
             D ++   FY    G             Y     G G              G+ K    
Sbjct: 8   TTDPERAKAFYGAVFGWTF-EDMGDGGGDYAVFSTGGGA-----------VGGLMKAPEP 55

Query: 182 TGFGHFG----IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE 237
                 G     AV+DV      V+A GGKV   P  +  G    A   DP+G  F L +
Sbjct: 56  AAGSPPGWLVYFAVDDVDAAAARVEAAGGKVLVPPTDI-PGVGRFAVFADPEGAVFGLWQ 114

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 54.8 bits (133), Expect = 1e-09
 Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 17/132 (12%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLL-RKRDIPEDRYTNAFLGYGPEDSHFVVEL------ 169
           H+   V DL+  +KFY + LG+    R+    E     AFLG G  +    +EL      
Sbjct: 3   HIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLG--NVQ--IELIEPLDD 58

Query: 170 --TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIED 227
                  ++K   G G  H    V+D+   +  +KA+G ++ +E   +  G   +AF+  
Sbjct: 59  DSPIAKFLEKR--GEGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHP 116

Query: 228 PDGYKF--ELLE 237
            D      EL+E
Sbjct: 117 KDTGGVLIELVE 128

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 53.9 bits (130), Expect = 3e-09
 Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 11/128 (8%)

Query: 113 RRMLHVVY---RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVEL 169
                +V+    V DL++   FY +  G       D+ E RY   F   G      ++  
Sbjct: 5   GEKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYA-VFPADGAGAGGGLMA- 62

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
                      G G      AV+D+  T++ V A GGKV R      GG   IA   DP+
Sbjct: 63  -----RPGSPPGGGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGR-IAHFVDPE 116

Query: 230 GYKFELLE 237
           G +F L  
Sbjct: 117 GNRFGLWS 124

Length = 127

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 53.8 bits (130), Expect = 3e-09
 Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 15/128 (11%)

Query: 117 HVVYRVGDLDKTIKFYTECLG-MKLLRKRDIPEDR-YTNAFLGYGPEDSHFVVELTYNYG 174
           HV   V DL+++  FY   LG +     ++  + R +     G      + V++      
Sbjct: 4   HVELTVRDLERSRAFYDWLLGLLGFEEVKEWEDGRSWRAGDGGT-----YLVLQQADGES 58

Query: 175 VDKYDI-GTGFGHFGIAVEDVAKTVD----LVKAKGGKVTREPGPVK--GGNTVIAFIED 227
             ++D    G  H           VD     +  +G ++   P      G      F ED
Sbjct: 59  AGRHDRRNPGLHHLAFRAPSREA-VDELYARLAKRGAEILYAPREPYAGGPGYYALFFED 117

Query: 228 PDGYKFEL 235
           PDG + EL
Sbjct: 118 PDGIRLEL 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 53.1 bits (128), Expect = 3e-09
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 3/110 (2%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H+   V DLD    F+ + LG+               AF   G +     VEL      +
Sbjct: 2   HIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLG-DGPAVEVELIQPLDGE 60

Query: 177 KYDI--GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 224
            +    G G  H    V+D+   V  ++A+G +V  +          +AF
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|213698 TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-dioxygenase

 Score = 55.5 bits (134), Expect = 7e-09
 Identities = 45/173 (26%), Positives = 60/173 (34%), Gaps = 36/173 (20%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFL-GYGPEDSHFVVELTYN 172
           R  HV  RV DLDK+ +FY + LG +               +L G      H +V     
Sbjct: 4   RTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKAP 57

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
                        + G  V   ED+ K  D  +  G  V        GG      +EDP 
Sbjct: 58  S--------AALSYIGFRVSKEEDLDKAADFFQKLGHPVRLVR---DGGQPEALRVEDPF 106

Query: 230 GYKFEL---------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAFG 267
           GY  E                  RG +P  L    + V D+ RA+ FYK+  G
Sbjct: 107 GYPIEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFVPDVQRALRFYKEELG 159

This enzyme catalyzes the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. The substrate, 3,4-dihydroxyphenylacetate (homoprotocatechuate) arises from the action of a hydroxylase on 4-hydroxyphenylacetate. The aromatic ring is opened by this dioxygenase exo to the 3,4-diol resulting in 2-hydroxy-5-carboxymethylmuconate semialdehyde. The enzyme from Bacillus brevis contains manganese. Length = 294

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 52.2 bits (126), Expect = 7e-09
 Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 13/122 (10%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS-HFVVELTYNYGV 175
           HV  RV DL+ +  FYT+ LG++   +   P   +  A+L  G     H + E       
Sbjct: 3   HVALRVPDLEASRAFYTDVLGLEEGPR---PPFLFPGAWLYAGDGPQLHLIEE----DPP 55

Query: 176 DKYDIGTG-FGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA-FIEDPDGYKF 233
           D    G G   H    V+D+      +KA G   T    P  G   V   F+ DPDG + 
Sbjct: 56  DALPEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDG---VRQLFVRDPDGNRI 112

Query: 234 EL 235
           EL
Sbjct: 113 EL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 52.1 bits (126), Expect = 1e-08
 Identities = 34/127 (26%), Positives = 44/127 (34%), Gaps = 18/127 (14%)

Query: 117 HVVYRVGDLDKTIKFYTEC---LGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           HV   V DL++   FY      LG+K +              +GYG         +T  +
Sbjct: 3   HVTLGVNDLERARAFYDAVLAPLGIKRVM-------EDGPGAVGYGKGGGGPDFWVTKPF 55

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVD----LVKAKGGKVTREPG--PVKGGNTVIAFIED 227
             +    G G  H   A       VD       A GG     PG  P  G     A++ D
Sbjct: 56  DGEPATAGNGT-HVAFAAPSRE-AVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRD 113

Query: 228 PDGYKFE 234
           PDG K E
Sbjct: 114 PDGNKIE 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 51.8 bits (125), Expect = 1e-08
 Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 19/130 (14%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED-------SHFVVEL 169
           HV     D  +T+ FYT+ LG++L++K    +D  T   L +G          + F    
Sbjct: 4   HVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTY-HLFFGDGLGSPGTLLTFFEWPD 62

Query: 170 TYNYGVDKYDIGTG-FGHFGIAVEDVAKTVDLVK---AKGGKVTREPGPVKGGNTVIAFI 225
               G      G G   H   +V   A      +   A G  V+      + G   + F 
Sbjct: 63  AGPKG----RRGPGQIHHIAFSVPSEASLEAWRERLRAAGVPVSGV--VDRFGERSLYF- 115

Query: 226 EDPDGYKFEL 235
           EDPDG + EL
Sbjct: 116 EDPDGIRLEL 125

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPN 289
            V LRVGDL+++++FY    G +L+ + D+ +  + S      
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAG 46

Length = 120

>gnl|CDD|176710 cd08362, BphC5-RrK37_N_like, N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

 Score = 49.6 bits (119), Expect = 7e-08
 Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 22/129 (17%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             +  V   V DL     FY E  G+       + ED     +L       H ++ L  +
Sbjct: 2   TALRGVGLGVPDLAAAAAFYREVWGLS-----VVAED-DGIVYLR-ATGSEHHILRLRRS 54

Query: 173 YGVDKYDIGTGFGHFGIA----VEDVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIE 226
              D+  +      F +A    V+ +A+ V    A+GG V  EPG     GG     F  
Sbjct: 55  ---DRNRLDV--VSFSVASRADVDALARQVA---ARGGTVLSEPGATDDPGGGYGFRFF- 105

Query: 227 DPDGYKFEL 235
           DPDG   E 
Sbjct: 106 DPDGRLIEF 114

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxygenases are activated by Fe(II). Length = 120

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score = 49.6 bits (118), Expect = 1e-07
 Identities = 20/32 (62%), Positives = 25/32 (78%)

Query: 249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           MLRVGDL R+I+FY    GM+LLR  +NP+YK
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYK 32

Length = 129

>gnl|CDD|176688 cd07267, THT_Oxygenase_N, N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 25/128 (19%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFL-GYGPEDSHFVVELTY 171
             + HV +   DLDK  +F T+  G+++  + D         +  GYG +   FV     
Sbjct: 2   TDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD------DELYYRGYGTD--PFV----- 47

Query: 172 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAK---GGKVTREPGPVKGGNTVIAFIEDP 228
            Y   K +    F          A   DL KA    G  V  +     GG  V   + DP
Sbjct: 48  -YVARKGE-KARFVGAAFEAASRA---DLEKAAALPGASVIDDLEAPGGGKRVT--LTDP 100

Query: 229 DGYKFELL 236
           DG+  EL+
Sbjct: 101 DGFPVELV 108

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity. Length = 113

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 6/129 (4%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+ HV   V DL++  KFY + LG ++    ++PE      F+  G      +  L  + 
Sbjct: 1   RIDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDS 60

Query: 174 GVDKY--DIGTGFGHFGIAVEDVAKTVDLVKAKGGK-VTREPGPVKGGNTVIAFI--EDP 228
            + K+    G G  H  I V+D+   ++ +K KG + +  EP     G  V AF+  +  
Sbjct: 61  PIAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGAHGKPV-AFLHPKST 119

Query: 229 DGYKFELLE 237
            G   EL +
Sbjct: 120 GGVLIELEQ 128

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|176696 cd08348, BphC2-C3-RGP6_C_like, The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 35/139 (25%), Positives = 51/139 (36%), Gaps = 12/139 (8%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           HVV  V DL+  ++FY + LG  +      P       FL   P++ H +  +T      
Sbjct: 4   HVVLYVRDLEAMVRFYRDVLGFTV--TDRGPLGGL--VFLSRDPDEHHQIALITGRPAAP 59

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLV---KAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
                 G  H    V+ +    DL    +A G        PV  GN    +  DPDG + 
Sbjct: 60  PPG-PAGLNHIAFEVDSLDDLRDLYERLRAAGIT---PVWPVDHGNAWSIYFRDPDGNRL 115

Query: 234 EL-LERGPTPEPLCQVMLR 251
           EL ++           ML 
Sbjct: 116 ELFVDTPWYVAQAAAFMLD 134

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, which form hexamers. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, its two domains do not belong to this subfamily. Length = 134

>gnl|CDD|211351 cd07251, Glo_EDI_BRP_like_10, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 44.5 bits (106), Expect = 5e-06
 Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 26/126 (20%)

Query: 122 VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY--D 179
           V DL ++  FY    G K         D    AF   G      V+ L   +  ++   D
Sbjct: 6   VADLARSRAFYRA-GGWK---TSADSNDGV--AFFQLG----GLVLAL---FPREELAKD 52

Query: 180 IG-----TGFGHFGIA-----VEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
            G      GF    +A      ++V   +    A G  + + P  V  G     +  DPD
Sbjct: 53  AGVPVPPPGFSGITLAHNVRSEDEVDAVLARAAAAGATIVKPPQKVFWGG-YSGYFADPD 111

Query: 230 GYKFEL 235
           G+ +E+
Sbjct: 112 GHLWEV 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 20/126 (15%)

Query: 122 VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG 181
           V DL+    FY + LG++L+ K D    R   AF   G       + L ++ G      G
Sbjct: 8   VDDLEAAEAFYEDVLGLELMLKED---RR--LAFFWVGGRG----MLLLFDPGATSTPGG 58

Query: 182 T-------GFGHFGIAV--EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
                   G GHF  A+  E++A+    ++AKG  +  E    +GG ++  +  DPDG  
Sbjct: 59  EIPPHGGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSL--YFRDPDGNL 116

Query: 233 FELLER 238
            EL   
Sbjct: 117 LELATP 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|211357 cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 11/114 (9%)

Query: 119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY 178
           V  V D++K++ FY + LG ++  +   PE  Y  A +      +   +           
Sbjct: 3   VLPVSDIEKSLAFYRDVLGFEVDFEH--PEPLY--AQVSRD--GAQLHLSEHDGDEWVPL 56

Query: 179 DIGTGFGHFGIAVEDVAKTVDLVKAKG-GKVTREPGPVKGGNTVIAFIEDPDGY 231
             G     + I V+DV      +KAKG   +   P     G    A ++DPDG 
Sbjct: 57  GRGGNV--Y-IEVDDVDALYAELKAKGAKLIVYPPEDQPWGQREFA-VQDPDGN 106

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the larger superfamily, this family contains members with or without domain swapping. Length = 112

>gnl|CDD|211353 cd07263, Glo_EDI_BRP_like_16, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 43.3 bits (103), Expect = 1e-05
 Identities = 33/141 (23%), Positives = 50/141 (35%), Gaps = 41/141 (29%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
            V   V D DK + FYTE LG ++  + D+P                   V +       
Sbjct: 1   LVSLYVDDQDKALAFYTEKLGFEV--REDVP------------MGGGFRWVTVA-----P 41

Query: 177 KYDIGTGF------------------GHFGI--AVEDVAKTVDLVKAKGGKVTREPGPVK 216
                T                    G  G+    +D+  T + +KA+G + T EP  + 
Sbjct: 42  PGSPETSLVLAPPANPAAMASGLQPGGTPGLVLVTDDIDATYEELKARGVEFTEEPREMP 101

Query: 217 GGNTVIAFIEDPDGYKFELLE 237
            G   +A   DPDG  F L++
Sbjct: 102 YG--TVAVFRDPDGNLFVLVQ 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 14/33 (42%), Positives = 23/33 (69%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRD 145
           +R+ HVV  V D++ T+ FYT  LGM+++R  +
Sbjct: 2   KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGE 34

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176693 cd08345, Fosfomycin_RP, Fosfomycin resistant protein; inhibits the biological function of fosfomycin

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 17/122 (13%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRY---TNAFLGYGPEDSHFVVELTYNY 173
           H+   V DL+K+I FY + LG +L+      ++ Y      ++    EDS    E TY +
Sbjct: 1   HITLIVKDLNKSIAFYRDILGAELIYSSS--KEAYFELAGLWICLMEEDSLQGPERTYTH 58

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
                        F I  E+  +  + +KA G ++  E   V+G    I F  DPDG+  
Sbjct: 59  IA-----------FQIQSEEFDEYTERLKALGVEMKPERPRVQGEGRSIYFY-DPDGHLL 106

Query: 234 EL 235
           EL
Sbjct: 107 EL 108

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 113

>gnl|CDD|176677 cd07254, Glo_EDI_BRP_like_20, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.3 bits (100), Expect = 3e-05
 Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 26/128 (20%)

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS--HFVVELTYNY 173
            HV   V DL+ +I FY++  G++  + R    D Y      +  ED   +FV+      
Sbjct: 3   FHVALNVDDLEASIAFYSKLFGVEPTKVR----DDYAK----FLLEDPRLNFVLN----- 49

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF-------IE 226
                  G G  H G+ V+      ++ +AK           K  +T   +       + 
Sbjct: 50  -ERPGAPGGGLNHLGVQVDSAE---EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVT 105

Query: 227 DPDGYKFE 234
           DPDG  +E
Sbjct: 106 DPDGNAWE 113

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 120

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.2 bits (100), Expect = 3e-05
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+  V  RV DL++++ FY + LG+++L + D      + A LG G +    V+E   + 
Sbjct: 2   RIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDA 55

Query: 174 GVDKYDIGTGFGHFGIAVEDVA 195
                   TG  HF I +   A
Sbjct: 56  PPAPPG-TTGLYHFAILLPSRA 76

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLL 286
            V L V DL+ +I+FY    G+ L++   N       Y L
Sbjct: 5   HVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHL 44

Length = 138

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.2 bits (100), Expect = 4e-05
 Identities = 13/30 (43%), Positives = 21/30 (70%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDN 276
            V LRV DL+R++ FY+   G+E+L + D+
Sbjct: 5   AVTLRVADLERSLAFYQDVLGLEVLERTDS 34

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|176708 cd08360, MhqB_like_C, C-terminal domain of Burkholderia sp

 Score = 42.3 bits (100), Expect = 5e-05
 Identities = 31/131 (23%), Positives = 46/131 (35%), Gaps = 23/131 (17%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTN--AFLGYGPEDSHFVVELT 170
           RR+ HVV  V D++    FY + LG +         DR+    AFL       H  + L 
Sbjct: 2   RRLGHVVLFVPDVEAAEAFYRDRLGFR-------VSDRFKGRGAFLRAAGGGDHHNLFL- 53

Query: 171 YNYGVDKYDIGTGFGHFGIAVEDV------AKTVDLVKAKGGKVTREPGPVKGGNTVIAF 224
               +       GF H    V D+         +      G +    PG  + G+    +
Sbjct: 54  ----IKTPAPMAGFHHAAFEVGDIDEVMLGGNHML---RAGYQTGWGPGRHRIGSNYFWY 106

Query: 225 IEDPDGYKFEL 235
             DP G + E 
Sbjct: 107 FRDPWGGEVEY 117

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Length = 134

>gnl|CDD|176661 cd07237, BphC1-RGP6_C_like, C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

 Score = 41.8 bits (99), Expect = 7e-05
 Identities = 23/105 (21%), Positives = 33/105 (31%), Gaps = 18/105 (17%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN---- 172
           HVV    D D+   FY + LG +L        D               F   L  N    
Sbjct: 12  HVVLATPDPDEAHAFYRDVLGFRL-------SDEIDIPLPPGPTARVTF---LHCNGRHH 61

Query: 173 -YGVDKYDIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPG 213
              + +        H  + V    DV +  D V+A+G  +    G
Sbjct: 62  SLALAEGPGPKRIHHLMLEVTSLDDVGRAYDRVRARGIPIAMTLG 106

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in this subfamily. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, they belong to a different subfamily of the ED_TypeI_classII_C (C-terminal domain of type I, class II extradiol dioxygenases) family. Length = 154

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 41.2 bits (97), Expect = 7e-05
 Identities = 39/139 (28%), Positives = 54/139 (38%), Gaps = 29/139 (20%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE-DSH-FVVELT 170
           + + HV     D  ++ +FY E LG+ L+R+              Y PE  S+   + L 
Sbjct: 2   KGIHHVAIICSDYARSKEFYVEVLGLTLIRET-------------YRPERKSYKLDLALN 48

Query: 171 YNYGVD-----------KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG-G 218
             Y ++            Y    G  H   AVED+   V  +KA G +V  EP  V    
Sbjct: 49  GEYQIELFSFPNPPPRPSYPEACGLRHLAFAVEDIEAAVAELKAHGVEV--EPIRVDEFT 106

Query: 219 NTVIAFIEDPDGYKFELLE 237
                F  DPDG   EL E
Sbjct: 107 GKRFTFFYDPDGLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|213698 TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-dioxygenase

 Score = 43.2 bits (102), Expect = 8e-05
 Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 14/127 (11%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+ H    V D+ + ++FY E LG ++    +  E     A+L       H   ++    
Sbjct: 136 RLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKG-GVH---DIALTN 191

Query: 174 GVDKYDIGTGFGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGG--NTVIAFIEDP 228
           G      G    H    V D     K  D++ + G   + E GP + G  N    ++ DP
Sbjct: 192 GN-----GPRLHHIAYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDP 246

Query: 229 DGYKFEL 235
           DG++ EL
Sbjct: 247 DGHRIEL 253

This enzyme catalyzes the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. The substrate, 3,4-dihydroxyphenylacetate (homoprotocatechuate) arises from the action of a hydroxylase on 4-hydroxyphenylacetate. The aromatic ring is opened by this dioxygenase exo to the 3,4-diol resulting in 2-hydroxy-5-carboxymethylmuconate semialdehyde. The enzyme from Bacillus brevis contains manganese. Length = 294

>gnl|CDD|176668 cd07244, FosA, FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

 Score = 40.8 bits (96), Expect = 9e-05
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 19/121 (15%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H+   V DL++++ FY + LG KL  + D        A+L  G  D    + +  N G  
Sbjct: 4   HITLAVSDLERSVAFYVDLLGFKLHVRWD------KGAYLEAG--DLWLCLSVDANVGPA 55

Query: 177 KYDIGTGFGH--FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 234
           K      + H  F ++ ED A   + ++  G K  +E      G++   +  DPDG+K E
Sbjct: 56  K-----DYTHYAFSVSEEDFASLKEKLRQAGVKEWKE--NTSEGDSF--YFLDPDGHKLE 106

Query: 235 L 235
           L
Sbjct: 107 L 107

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 121

>gnl|CDD|233334 TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygenase

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 36/188 (19%), Positives = 59/188 (31%), Gaps = 42/188 (22%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR----YTNAFLGYGPEDSHFVV--ELT 170
            V + VGD  +   +Y    G + + K     ++                 +FV+    +
Sbjct: 5   FVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREKASHVLRQG-------QINFVLTAPYS 57

Query: 171 YNYGVDKYDI--GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIE-- 226
            +     +    G G       V+D A   +    +G +  + P  +  G   +A I+  
Sbjct: 58  SDSPAADFAAKHGDGVKDVAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGI 117

Query: 227 --------DPDGYK-------FELLERGPTPEPLCQVMLRV----------GDLDRAINF 261
                   D  GYK       FE L      EP   V L            G ++    F
Sbjct: 118 GDVVHTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVGLIAIDHLVGNVYRGQMEPWAEF 177

Query: 262 YKKAFGME 269
           Y+K FG  
Sbjct: 178 YEKIFGFR 185

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PMID:8000039). In some bacterial species, this enzyme has been studied as a hemolysin [Energy metabolism, Amino acids and amines]. Length = 353

>gnl|CDD|211355 cd08343, ED_TypeI_classII_C, C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 16/124 (12%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           HVV R  D+  T  FYT+ LG ++  +   P      A+L    ++ H +        + 
Sbjct: 2   HVVLRTPDVAATRAFYTDVLGFRVSDRVGDPGVLAA-AWL-RCDDEHHDL-------ALF 52

Query: 177 KYDIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGY 231
               G G  H    VE   D+ +  D + A G  +  E GP +   GN +  +  DPDG 
Sbjct: 53  PGPEGPGLHHVAFEVESLDDIKRAGDRLAANG--IQIEWGPGRHGPGNNLFLYFRDPDGN 110

Query: 232 KFEL 235
           + EL
Sbjct: 111 RIEL 114

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are type I, class II enzymes, and are composed of the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. A catalytically essential metal, Fe(II) or Mn(II), presents in all the enzymes in this family. Length = 131

>gnl|CDD|176690 cd08342, HPPD_N_like, N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

 Score = 40.2 bits (95), Expect = 2e-04
 Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 19/134 (14%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV--ELTYNYG 174
           HV + VG+  +   +++  LG + +      ED+ +         D +FV+   L     
Sbjct: 3   HVEFYVGNAKQLASWFSTKLGFEPVAYH-GSEDKASYL---LRQGDINFVLNSPLNSFAP 58

Query: 175 VDKYDI--GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG----------GNTVI 222
           V  +    G G       V+D A   +   A+G K  +EP    G          G+++ 
Sbjct: 59  VADFLEKHGDGVCDVAFRVDDAAAAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLH 118

Query: 223 AFIEDPDGYKFELL 236
             ++   GYK   L
Sbjct: 119 TLVDR-KGYKGPFL 131

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, substrates, do not use alpha-ketoglutarate, and incorporate both atoms of dioxygen into the aromatic product. Both HPPD and HmaS exhibit duplicate beta barrel topology in their N- and C-terminal domains which share sequence similarity, suggestive of a gene duplication. Each protein has only one catalytic site located in at the C-terminal domain. This HPPD_N_like domain represents the N-terminal domain. Length = 136

>gnl|CDD|234146 TIGR03211, catechol_2_3, catechol 2,3 dioxygenase

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 46/183 (25%), Positives = 69/183 (37%), Gaps = 41/183 (22%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR-YTNAFLGYGPEDSHFVVELTYN 172
           R+ HV  RV DL++++K YT+ LG++    RD    R Y  A+  +     H+ V LT  
Sbjct: 4   RLGHVELRVLDLEESLKHYTDVLGLEET-GRD--GQRVYLKAWDEWD----HYSVILTEA 56

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREP-GPVKGGNTVIAFIEDP 228
              D      G  H    V    D+ + V  ++A G      P G + G    + F   P
Sbjct: 57  ---DT----AGLDHMAFKVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRF-TLP 108

Query: 229 DGYKFELL---ERGPT------PEP------------LCQVMLRVGDLDRAINFYKKAFG 267
            G+  EL    E          P+P            L   +L   D+     F+ +  G
Sbjct: 109 SGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDHCLLYGEDVAENTRFFTEVLG 168

Query: 268 MEL 270
             L
Sbjct: 169 FRL 171

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase [Energy metabolism, Other]. Length = 303

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 38.9 bits (91), Expect = 4e-04
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPD 278
            V L V DL+ A+ FY+   G E+L +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGA 32

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|211354 cd07266, HPCD_N_class_II, N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

 Score = 39.2 bits (92), Expect = 4e-04
 Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 22/128 (17%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS-HFVVELTYN 172
           R+ HV  RV DLD++ +FY + LG+       +  +    A    G E+  H  + LT  
Sbjct: 4   RLGHVELRVTDLDRSREFYVDLLGL-------VVTEEDDGAIYLRGLEEFIHHSLVLT-- 54

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTR-EPGPVKG-GNTVIAFIED 227
               K       GH G  V   ED+ K     +  G      E G   G G  +   ++D
Sbjct: 55  ----KAP-EPAVGHLGFRVRSEEDLDKAEAFFQELGLPTRWVEAGEEPGQGRALR--VQD 107

Query: 228 PDGYKFEL 235
           P G+  E 
Sbjct: 108 PLGFPLEF 115

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a different superfamily. Length = 121

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 39.4 bits (92), Expect = 8e-04
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPP 288
           Q M R+ D   +++FY +  GM LL++ D P+ K + Y L  
Sbjct: 30  QTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY 71

Length = 185

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.8 bits (86), Expect = 0.002
 Identities = 10/31 (32%), Positives = 19/31 (61%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPD 278
           V+L V D++  ++FY +  GME++R  +   
Sbjct: 7   VVLTVADIEATLDFYTRVLGMEVVRFGEEVG 37

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176663 cd07239, BphC5-RK37_C_like, C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 17/125 (13%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            ++ HVV    D+DKT+ FY + LG ++    D   D+   AFL     D H +      
Sbjct: 3   VKISHVVLNSPDVDKTVAFYEDVLGFRV---SDWLGDQM--AFLRCN-SDHHSIAIARGP 56

Query: 173 YGVDKYDIGTGFGHFGI---AVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
           +            H      ++++V + +  +  KG  +   PG    G+   A+  DP 
Sbjct: 57  H--------PSLNHVAFEMPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPG 108

Query: 230 GYKFE 234
           G+  E
Sbjct: 109 GFVIE 113

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxygenases are activated by Fe(II). Length = 144

>gnl|CDD|222152 pfam13468, Glyoxalase_3, Glyoxalase-like domain

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 32/141 (22%), Positives = 49/141 (34%), Gaps = 17/141 (12%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFL----GY----GPEDSHFVVE 168
           H+V  V DLD+ +  + + LG  L      P     NA L    GY      +      +
Sbjct: 3   HLVVAVPDLDEAVARFEDRLGFTLTPGGRHPGMGTHNALLYFGDGYLELLAIDPEAPAPD 62

Query: 169 LTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGG--NTVIAFIE 226
               +G+D+   G G   + +  +D+      ++A G           GG     +A   
Sbjct: 63  GGRWFGLDRLAGGPGLSGWALRTDDIDAVAARLRAAGLDFGG-RVRPDGGDLRWRLAVPA 121

Query: 227 DPDGYKFELLERGPTPEPLCQ 247
           D D     L   G  P  L Q
Sbjct: 122 DGD-----LPAGGLLPF-LIQ 136

This domain is related to the Glyoxalase domain pfam00903. Length = 174

>gnl|CDD|211349 cd07246, Glo_EDI_BRP_like_8, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.8 bits (86), Expect = 0.003
 Identities = 29/116 (25%), Positives = 40/116 (34%), Gaps = 14/116 (12%)

Query: 122 VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF-VVELTYNYGVDKYDI 180
           V D    I FY +  G + L +    + R  +A L  G  DS   + +    +G      
Sbjct: 9   VRDAAAAIDFYKKAFGAEELARMPDDDGRIMHAELRIG--DSVLMLADEFPEHGASPASW 66

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP-----GPVKGGNTVIAFIEDPDGY 231
           G       + VEDV  T     A G      P     G   GG      + DP G+
Sbjct: 67  GGTPVSLHLYVEDVDATYARAVAAGATSVMPPADQFWGDRYGG------VRDPFGH 116

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins. Length = 123

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 36.1 bits (84), Expect = 0.004
 Identities = 17/83 (20%), Positives = 26/83 (31%), Gaps = 9/83 (10%)

Query: 186 HFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN--TVIAFIEDPDGYKFELLERGPTPE 243
           H GI V D+           G         +  N     A + D    + EL++      
Sbjct: 2   HIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLGDGPAVEVELIQPLDGES 61

Query: 244 PLCQ-------VMLRVGDLDRAI 259
            L +       +   V DLD A+
Sbjct: 62  FLDKGGPGLHHIAYWVDDLDAAV 84

Length = 110

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	292
PLN02300	286	lactoylglutathione lyase	99.96
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.93
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.89
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.88
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.87
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.84
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.82
PRK10291	129	glyoxalase I; Provisional	99.82
PLN02367	233	lactoylglutathione lyase	99.8
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.78
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.77
PLN03042	185	Lactoylglutathione lyase; Provisional	99.77
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.77
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.77
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.77
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.77
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.76
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.75
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.75
PRK11478	129	putative lyase; Provisional	99.75
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.73
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.73
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.73
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.73
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.73
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.73
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.72
PLN02300	286	lactoylglutathione lyase	99.72
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.72
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.71
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.71
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.71
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.71
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.71
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.71
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.7
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.7
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.69
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.69
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.68
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.68
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.68
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.68
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.67
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.67
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.67
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.67
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.67
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.67
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.66
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.65
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.65
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.65
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.64
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.63
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.63
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.62
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.62
PRK06724	128	hypothetical protein; Provisional	99.62
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.6
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.6
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.59
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.59
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.59
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.58
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.58
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.58
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.57
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.57
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.56
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.56
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.55
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.55
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.52
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.51
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.49
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.49
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.45
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.43
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.4
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.39
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.39
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.35
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.3
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.21
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	99.17
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.16
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.03
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.96
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.95
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	98.9
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.87
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.86
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.72
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.63
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.59
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.36
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.34
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	98.23
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	98.17
PLN02367	233	lactoylglutathione lyase	98.11
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.1
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.05
PRK10148	147	hypothetical protein; Provisional	98.03
PLN03042	185	Lactoylglutathione lyase; Provisional	98.01
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	97.89
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	97.74
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	97.73
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	97.71
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	97.65
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	97.57
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	97.56
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	97.55
PRK10291	129	glyoxalase I; Provisional	97.46
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	97.36
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	97.29
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	97.2
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	97.2
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	97.15
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	97.13
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	97.08
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.03
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	97.03
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	97.02
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	97.02
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	97.01
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	96.98
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	96.96
COG3324	127	Predicted enzyme related to lactoylglutathione lya	96.95
PRK11478	129	putative lyase; Provisional	96.93
PRK06724	128	hypothetical protein; Provisional	96.91
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	96.91
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	96.87
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	96.86
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	96.84
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	96.81
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	96.78
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	96.76
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	96.75
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	96.74
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	96.74
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	96.72
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	96.71
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	96.71
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	96.7
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	96.69
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	96.65
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	96.64
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.55
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	96.51
PRK04101	139	fosfomycin resistance protein FosB; Provisional	96.49
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	96.47
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	96.45
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	96.42
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	96.41
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	96.41
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	96.37
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	96.16
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	96.09
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	95.84
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	95.76
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	95.69
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	95.48
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	95.26
PF15067	236	FAM124: FAM124 family	94.95
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	94.87
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	94.85
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	94.67
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	94.61
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	94.58
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	94.57
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	94.51
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	94.24
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	94.23
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	93.98
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	93.82
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	93.77
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	93.18
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	92.95
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	92.22
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	88.73
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	87.19
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	85.14
COG3607	133	Predicted lactoylglutathione lyase [General functi	84.42
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	83.95
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	83.59

>PLN02300 lactoylglutathione lyase

Probab=99.96  E-value=4.2e-28  Score=217.19  Aligned_cols=187  Identities=84%  Similarity=1.429  Sum_probs=155.6

Q ss_pred             ccchhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCC
Q 022769          102 QNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG  181 (292)
Q Consensus       102 ~g~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g  181 (292)
                      +....|....+.+|.|+.|.|+|++++++||+++|||++..+...++..+...++..++...++.+++....+......+
T Consensus        12 ~~~~~~~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~~   91 (286)
T PLN02300         12 EDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIG   91 (286)
T ss_pred             hhhhcCCccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCCCccccC
Confidence            45667877789999999999999999999999999999977654444455667777665555667777654433333345


Q ss_pred             CceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCCCCCceeeeeecCCHHHHHHH
Q 022769          182 TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINF  261 (292)
Q Consensus       182 ~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~~~~l~hv~l~v~D~~~s~~f  261 (292)
                      .|+.|++|.|+|+++++++++++|+++..++...+.+..+.+|++||+|+.|||++..+.+.++.|+.|.|+|++++.+|
T Consensus        92 ~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~l~~~d~~~a~~F  171 (286)
T PLN02300         92 TGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDLDRSIKF  171 (286)
T ss_pred             CCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCcceeEEEEeCCHHHHHHH
Confidence            68999999999999999999999999988877776666677899999999999999998899999999999999999999


Q ss_pred             HHHhcCCEEEeeecCCCCcEEEEEcCC
Q 022769          262 YKKAFGMELLRKRDNPDYKVNSYLLPP  288 (292)
Q Consensus       262 Y~~~lG~~~~~~~~~~~~~~~~~~~~~  288 (292)
                      |+++|||++.+..+.++..|.++++.+
T Consensus       172 y~~~lg~~~~~~~~~~~~~~~~~~~~~  198 (286)
T PLN02300        172 YEKAFGMKLLRKRDNPEYKYTIAMMGY  198 (286)
T ss_pred             HHhccCCEEEeeecccccceEEEEEec
Confidence            999999999976666666788877654

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.93  E-value=9.2e-26  Score=187.70  Aligned_cols=176  Identities=51%  Similarity=0.928  Sum_probs=157.7

Q ss_pred             chhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCC-----------CceEEEEEeeCCCCceEEEEEEec
Q 022769          104 VLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----------DRYTNAFLGYGPEDSHFVVELTYN  172 (292)
Q Consensus       104 ~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~~~~l~l~~~  172 (292)
                      ..+|..++..|+-|+++.|.|.+++++||+++|||++....+.++           +++...++++|++..|+.+++..+
T Consensus         7 ~~~~~~~~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYN   86 (299)
T KOG2943|consen    7 LLCWMKADTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYN   86 (299)
T ss_pred             hhhhhhccchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEec
Confidence            468988889999999999999999999999999999998877766           688899999999999999999999


Q ss_pred             CCCCCCcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCCCCCceeeeeec
Q 022769          173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRV  252 (292)
Q Consensus       173 ~~~~~~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~~~~l~hv~l~v  252 (292)
                      .+...+..|+++.||++.++|+-...+.+...|.+.         +....+++.||||+.|++.++.|.+.+++.|+|+|
T Consensus        87 YgV~~YelGndfg~i~I~s~dv~~~ve~v~~p~~~~---------~g~~~~~v~dPdGykF~l~~~~p~s~pv~~V~l~V  157 (299)
T KOG2943|consen   87 YGVSKYELGNDFGGITIASDDVFSKVEKVNAPGGKG---------SGCGIAFVKDPDGYKFYLIDRGPQSDPVLQVMLNV  157 (299)
T ss_pred             cCccceeccCCcccEEEeHHHHHHHHHHhcCcCCcc---------cceEEEEEECCCCcEEEEeccCCCCCCeEEEEEEe
Confidence            999999999999999999999877777776665432         23345779999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCCCCCC
Q 022769          253 GDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPNKLQ  292 (292)
Q Consensus       253 ~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~  292 (292)
                      .|+++|++||++.|||++.+.    +.+|+.+.|++++.|
T Consensus       158 gdL~ks~kyw~~~lgM~ilek----eek~t~~~mgYgd~q  193 (299)
T KOG2943|consen  158 GDLQKSIKYWEKLLGMKILEK----EEKYTRARMGYGDEQ  193 (299)
T ss_pred             hhHHHHHHHHHHHhCcchhhh----hhhhhhhhhccCCcc
Confidence            999999999999999999985    567888999999876

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.89  E-value=1.7e-21  Score=175.75  Aligned_cols=155  Identities=25%  Similarity=0.309  Sum_probs=116.9

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      +++|+|+.|.|+|++++++||+++|||++..+..  .    .+++.......+..+.+...       ...|++|++|.|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~--~----~~~~~~~~~~~~~~~~l~~~-------~~~g~~hiaf~v   68 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDG--Q----RVYLKAWDEWDHYSVILTEA-------DTAGLDHMAFKV   68 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecC--c----eEEEEeccccccceEeeccC-------CCCceeEEEEEe
Confidence            6799999999999999999999999999876532  1    24444322222334444322       124789999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC---------------------CCCcee
Q 022769          192 E---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------------PEPLCQ  247 (292)
Q Consensus       192 ~---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~---------------------~~~l~h  247 (292)
                      +   |+++++++|+++|+++...+.....+....+|++||+|+.|||++....                     ..+++|
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H  148 (303)
T TIGR03211        69 ESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDH  148 (303)
T ss_pred             CCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccccccccccccCCcccccccCCcCceeEEE
Confidence            8   6889999999999998765542223445679999999999999974421                     226899


Q ss_pred             eeeecCCHHHHHHHHHHhcCCEEEeeecCCCC
Q 022769          248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDY  279 (292)
Q Consensus       248 v~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~  279 (292)
                      |.|.|+|++++.+||+++|||++.++...++.
T Consensus       149 i~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~  180 (303)
T TIGR03211       149 CLLYGEDVAENTRFFTEVLGFRLTEQVVLGDG  180 (303)
T ss_pred             EeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCC
Confidence            99999999999999999999999876544443

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.88  E-value=6.5e-21  Score=171.14  Aligned_cols=160  Identities=28%  Similarity=0.380  Sum_probs=118.4

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      +++|+||.|.|+|++++++||+++|||++..+..      ..+++.......+..+.+...       ...++.|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~------~~~~~~~~~~~~~~~l~l~~~-------~~~~~~hiaf~v   68 (294)
T TIGR02295         2 ILRTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKA-------PSAALSYIGFRV   68 (294)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC------CeEEEeccCcCCceEEEeeeC-------CCcCccEEEEEe
Confidence            6799999999999999999999999999876532      134444322222233444332       124788999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC---------------CCCCceeeeeecC
Q 022769          192 E---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------TPEPLCQVMLRVG  253 (292)
Q Consensus       192 ~---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~---------------~~~~l~hv~l~v~  253 (292)
                      +   |+++++++|+++|+++...+.   .+..+.+||+||||+.|||++...               ...+++|+.|.|.
T Consensus        69 ~~~~dl~~~~~~l~~~Gv~v~~~~~---~~~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~i~Hv~l~v~  145 (294)
T TIGR02295        69 SKEEDLDKAADFFQKLGHPVRLVRD---GGQPEALRVEDPFGYPIEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFVP  145 (294)
T ss_pred             CCHHHHHHHHHHHHhcCCcEEeecC---CCCceEEEEECCCCCEEEEEEchhhcccccccccccCCccceeeeeEEEEeC
Confidence            7   688999999999999865432   234578999999999999986321               1237899999999


Q ss_pred             CHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcC
Q 022769          254 DLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLP  287 (292)
Q Consensus       254 D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~  287 (292)
                      |++++.+||+++|||+++++...++......|+.
T Consensus       146 dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~  179 (294)
T TIGR02295       146 DVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLH  179 (294)
T ss_pred             CHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEe
Confidence            9999999999999999987654444443344443

The enzyme from Bacillus brevis contains manganese.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.87  E-value=6.2e-21  Score=170.79  Aligned_cols=150  Identities=23%  Similarity=0.318  Sum_probs=114.2

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      +.+|+|++|.|+|++++++||+++|||++..+..  +   ...|+..+..  ++.+.+....       ..++.|++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~---~~~~~~~~~~--~~~~~l~~~~-------~~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--N---DALYLRLDSR--AHRIAVHPGE-------SDDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--C---ceEEEEcCCC--ceEEEEEECC-------cCCeeeEeeee
Confidence            4689999999999999999999999998754321  1   1345565432  2334443321       13688999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCee--cCCCCeEEEEEECCCCCEEEEEEcCCC------------------CCCceee
Q 022769          192 ED---VAKTVDLVKAKGGKVTREPGP--VKGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQV  248 (292)
Q Consensus       192 ~D---l~~~~~~L~~~G~~i~~~p~~--~~~g~~~~~y~~DPdG~~iel~e~~~~------------------~~~l~hv  248 (292)
                      +|   ++++.++|+++|+++...+..  ...+...+++|+|||||.+|++.....                  +.+|+||
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv  146 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGAVEDFEKPFVSPRAVSGFVTGDQGLGHI  146 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcccccCCCCCCCCCCCCccccCCccccEE
Confidence            98   888999999999998765432  122456789999999999999963311                  2278999


Q ss_pred             eeecCCHHHHHHHHHHhcCCEEEeeec
Q 022769          249 MLRVGDLDRAINFYKKAFGMELLRKRD  275 (292)
Q Consensus       249 ~l~v~D~~~s~~fY~~~lG~~~~~~~~  275 (292)
                      .|.|+|++++.+||+++|||++++...
T Consensus       147 ~l~v~Dle~s~~FY~~~LGf~~~~~~~  173 (286)
T TIGR03213       147 VLRVPDVDAALAFYTEVLGFQLSDVID  173 (286)
T ss_pred             EEEcCCHHHHHHHHHHccCCeEEEeEc
Confidence            999999999999999999999987643

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.84  E-value=1.5e-19  Score=146.60  Aligned_cols=137  Identities=63%  Similarity=1.079  Sum_probs=104.8

Q ss_pred             cCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEE
Q 022769          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (292)
Q Consensus       110 ~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~  189 (292)
                      +.+++|.|+.|.|.|++++.+||+++|||++..+...++..+..+++..+....+..+++.......+...+.++.|++|
T Consensus        13 ~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~f   92 (150)
T TIGR00068        13 TKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIAI   92 (150)
T ss_pred             cCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEEE
Confidence            56889999999999999999999999999987665444444455666655444445566544332222233458999999


Q ss_pred             eeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCCCCCce
Q 022769          190 AVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLC  246 (292)
Q Consensus       190 ~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~~~~l~  246 (292)
                      .|+|++++.++|.++|+++..++...+.+..+.+|++||+|++|||++..+...+++
T Consensus        93 ~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~  149 (150)
T TIGR00068        93 GVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTKDGLG  149 (150)
T ss_pred             ecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCchhhhcc
Confidence            999999999999999999887776666666678899999999999999876655543

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.82  E-value=8e-19  Score=150.27  Aligned_cols=151  Identities=24%  Similarity=0.382  Sum_probs=117.2

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCC-CCcCCCceEEEEE
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD-KYDIGTGFGHFGI  189 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~-~~~~g~g~~hia~  189 (292)
                      ..+.++-|+|.|+|++++..||+++||+++..+..      ....+..++.   ..+.+.+.+... ......|+.|+||
T Consensus         7 ~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg~---~LL~L~q~~~a~~~~~~~aGLyH~Af   77 (265)
T COG2514           7 TPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGGT---PLLTLEQFPDARRPPPRAAGLYHTAF   77 (265)
T ss_pred             CCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCCE---EEEEEEeCCCCCCCCccccceeeeee
Confidence            35678999999999999999999999999988754      2345555443   344444432222 2234569999999


Q ss_pred             eeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC-------------------------
Q 022769          190 AVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-------------------------  241 (292)
Q Consensus       190 ~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~-------------------------  241 (292)
                      .+++   +..+..++.+.|..+.. ..  +......+|+.||+||.||++.++|.                         
T Consensus        78 LlP~r~~L~~~l~hl~~~~~~l~G-a~--DH~vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~~v~m~t~~ld~~~ll~~  154 (265)
T COG2514          78 LLPTREDLARVLNHLAEEGIPLVG-AS--DHLVSEALYLEDPEGNGIEIYADRPRSTWDWQNDQVKMDTEPLDVEALLEE  154 (265)
T ss_pred             ecCCHHHHHHHHHHHHhcCCcccc-cC--cchhheeeeecCCCCCeEEEEecCChHHhcccCCeeeecccccCHHHHhhh
Confidence            9996   77788899999998862 23  33567789999999999999977542                         


Q ss_pred             -----------CCCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          242 -----------PEPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       242 -----------~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                                 ...|+||.|.|.|++++.+||.++|||++..+
T Consensus       155 ~~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~  197 (265)
T COG2514         155 ATKEPWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTAR  197 (265)
T ss_pred             ccccccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeec
Confidence                       11589999999999999999999999999986

>PRK10291 glyoxalase I; Provisional

Probab=99.82  E-value=1.1e-18  Score=137.78  Aligned_cols=125  Identities=56%  Similarity=1.044  Sum_probs=95.7

Q ss_pred             EEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHHHHH
Q 022769          120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVD  199 (292)
Q Consensus       120 L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~~~~  199 (292)
                      |.|+|++++++||+++|||++..+...++..+..+++..++......+++....+..+...+.+++|++|.|+|++++++
T Consensus         2 l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~~   81 (129)
T PRK10291          2 LRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACE   81 (129)
T ss_pred             EEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHHH
Confidence            78999999999999999999877655555556677776655443445666544333333455689999999999999999


Q ss_pred             HHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCCCCC
Q 022769          200 LVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP  244 (292)
Q Consensus       200 ~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~~~~  244 (292)
                      +|+++|+++..++...+.+..+.+||+||||++|||++....+..
T Consensus        82 ~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~~~~  126 (129)
T PRK10291         82 KIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRG  126 (129)
T ss_pred             HHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccccccc
Confidence            999999998776665555556678899999999999997644433

>PLN02367 lactoylglutathione lyase

Probab=99.80  E-value=4.3e-18  Score=145.37  Aligned_cols=130  Identities=36%  Similarity=0.680  Sum_probs=102.9

Q ss_pred             cCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCC---------------CceEEEEEEecCC
Q 022769          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE---------------DSHFVVELTYNYG  174 (292)
Q Consensus       110 ~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~---------------~~~~~l~l~~~~~  174 (292)
                      +....+.|+.|.|+|++++++||+++|||++..+.+.++..+..+|+++++.               .....|||..+.+
T Consensus        71 t~~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g  150 (233)
T PLN02367         71 TKGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWG  150 (233)
T ss_pred             CCCcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCC
Confidence            3456899999999999999999999999999998888888888888865331               1134688877554


Q ss_pred             CCC------CcCC----CceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC
Q 022769          175 VDK------YDIG----TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       175 ~~~------~~~g----~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                      ...      +..+    .|++||+|.|+|+++++++|+++|+++...|....  ....+|++||||++|||++....
T Consensus       151 ~e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~--~~riaFIkDPDGn~IEL~e~~~~  225 (233)
T PLN02367        151 TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGK--MKGIAFIKDPDGYWIEIFDLKTI  225 (233)
T ss_pred             CCccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCC--ceEEEEEECCCCCEEEEEecccc
Confidence            331      2222    48999999999999999999999999987665432  24568999999999999986543

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.78  E-value=5.5e-18  Score=151.73  Aligned_cols=159  Identities=21%  Similarity=0.284  Sum_probs=110.9

Q ss_pred             chhhhhhhhhcCCeeeeccCCCCCCCeeecCCccchhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeC--C
Q 022769           70 GAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI--P  147 (292)
Q Consensus        70 g~~~~~~~d~dg~~~~~~~~~~~~~a~~~~~p~g~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~--~  147 (292)
                      +..++.|.||+|+.+++..+...........|.....+ ...+++|+||+|.|+|++++.+||+++|||++......  +
T Consensus        99 ~~~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~  177 (286)
T TIGR03213        99 VLGLIKFTDPGGNPLEIYYGAVEDFEKPFVSPRAVSGF-VTGDQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAG  177 (286)
T ss_pred             ceEEEEEECCCCCEEEEEEcccccCCCCCCCCCCCCcc-ccCCccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCC
Confidence            34678899999999999876553311001111111113 34578999999999999999999999999998765322  1


Q ss_pred             CC-ceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHH---HHHHHHHcCCeeecCCeecCCCCeEEE
Q 022769          148 ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIA  223 (292)
Q Consensus       148 ~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~---~~~~L~~~G~~i~~~p~~~~~g~~~~~  223 (292)
                      ++ .+..+|+.+++.+  +.+.+....      ...+++|++|+|+|.++   +.++|+++|+ ....++.++.++..++
T Consensus       178 ~g~~~~~~~l~~~~~~--~~~~l~~~~------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~  248 (286)
T TIGR03213       178 PGVTVRPYFLHCNERH--HSLAFAAGP------SEKRLNHLMLEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSF  248 (286)
T ss_pred             CCCcceEEEEEECCCc--ceEEEecCC------CCCceEEEEEEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEE
Confidence            11 1235677665443  233333211      23489999999998665   7999999999 5556666666778899


Q ss_pred             EEECCCCCEEEEEEc
Q 022769          224 FIEDPDGYKFELLER  238 (292)
Q Consensus       224 y~~DPdG~~iel~e~  238 (292)
                      |++||+|++||+.+.
T Consensus       249 y~~DP~G~~iE~~~~  263 (286)
T TIGR03213       249 YVATPSGWLVEYGWG  263 (286)
T ss_pred             EEECCCCcEEEeecC
Confidence            999999999999864

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.77  E-value=2.2e-17  Score=128.02  Aligned_cols=120  Identities=53%  Similarity=0.927  Sum_probs=89.9

Q ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCC-CCCcCCCceEEEEEeeCC
Q 022769          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-DKYDIGTGFGHFGIAVED  193 (292)
Q Consensus       115 i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~-~~~~~g~g~~hia~~V~D  193 (292)
                      |.|++|.|+|++++.+||+++|||++......+++.+..+++.......+..+++....+. .....+.++.|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5899999999999999999999999887654444345556776544112334555443222 223344588999999999


Q ss_pred             HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEE
Q 022769          194 VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (292)
Q Consensus       194 l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~  236 (292)
                      +++++++++++|+++..+|...  +..+.+|++||+|++||++
T Consensus        81 id~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERLEEMGVEVTKPPGDG--GMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHHHHCCCEEeeCCccC--CCceEEEEECCCCCEEEeC
Confidence            9999999999999998776655  3456789999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.77  E-value=2.6e-17  Score=137.53  Aligned_cols=128  Identities=34%  Similarity=0.655  Sum_probs=97.3

Q ss_pred             cCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCC---------------ceEEEEEEecCC
Q 022769          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED---------------SHFVVELTYNYG  174 (292)
Q Consensus       110 ~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~---------------~~~~l~l~~~~~  174 (292)
                      +...++.|+.|.|.|++++++||+++|||++..+...++..+..+++..+...               ....|+|....+
T Consensus        23 ~~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~  102 (185)
T PLN03042         23 TKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWG  102 (185)
T ss_pred             CCCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCC
Confidence            34668999999999999999999999999998887666666777777643211               123677775433


Q ss_pred             CCC------Cc----CCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          175 VDK------YD----IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       175 ~~~------~~----~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      ...      +.    .+.|++|++|.|+|+++++++|+++|+.+...|...  .....+|++||||++|||++..
T Consensus       103 ~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~--~~~~~~fi~DPdG~~IEl~e~~  175 (185)
T PLN03042        103 TESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDG--KMKGLAFIKDPDGYWIEIFDLK  175 (185)
T ss_pred             CcccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccC--CceeEEEEECCCCCEEEEEECC
Confidence            211      21    124899999999999999999999999987665432  2345678899999999999864

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.77  E-value=1.9e-17  Score=133.23  Aligned_cols=118  Identities=17%  Similarity=0.258  Sum_probs=87.7

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCc-eEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR-YTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      +++|+||+|.|+|++++.+||+++|||++..+...+++. ....|+..+.. . +.+.+...       .+.+++|+||.
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~-~-h~~~~~~~-------~~~~~~Hiaf~   74 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK-P-HDIAFVGG-------PDGKLHHFSFF   74 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC-c-ceEEEecC-------CCCCceEEEEE
Confidence            568999999999999999999999999987664332222 23456655433 2 23333221       12489999999


Q ss_pred             eCCHHH---HHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          191 VEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       191 V~Dl~~---~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      |+|+++   +.++|+++|+++..+|..+..+...++||+||||++|||.+.
T Consensus        75 v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          75 LESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             cCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            999776   678999999998777765543456779999999999999865

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.77  E-value=1.8e-18  Score=148.04  Aligned_cols=158  Identities=18%  Similarity=0.269  Sum_probs=126.9

Q ss_pred             ccchhhhhhccccccccccchhhhhhhhhcCCeeeeccCCCCCCCeeecCCcc----------chhhhccC---------
Q 022769           51 SRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQN----------VLDWVKSD---------  111 (292)
Q Consensus        51 ~~r~~~~~~~~~~~~~~~~g~~~~~~~d~dg~~~~~~~~~~~~~a~~~~~p~g----------~~~w~~~~---------  111 (292)
                      .+..||||+|+++|.+.++|....++.. .|.++...++|.+++|.|+.||+|          ..+|.+..         
T Consensus        67 ~~~aGLyH~AfLlP~r~~L~~~l~hl~~-~~~~l~Ga~DH~vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~~v~m~t~~  145 (265)
T COG2514          67 PRAAGLYHTAFLLPTREDLARVLNHLAE-EGIPLVGASDHLVSEALYLEDPEGNGIEIYADRPRSTWDWQNDQVKMDTEP  145 (265)
T ss_pred             ccccceeeeeeecCCHHHHHHHHHHHHh-cCCcccccCcchhheeeeecCCCCCeEEEEecCChHHhcccCCeeeecccc
Confidence            4679999999999999999999999888 899999899999999999999997          33443222         


Q ss_pred             --------------------ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEe
Q 022769          112 --------------------KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY  171 (292)
Q Consensus       112 --------------------i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~  171 (292)
                                          .+.|+||+|.|.|++++.+||+++|||+++.+..      ...|++.|++++|+..+.|.
T Consensus       146 ld~~~ll~~~~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~YHHHia~N~W~  219 (265)
T COG2514         146 LDVEALLEEATKEPWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDYHHHLAANTWN  219 (265)
T ss_pred             cCHHHHhhhccccccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCcceeEEEeccc
Confidence                                5789999999999999999999999999988722      35899999999999999998


Q ss_pred             cCCCCCCc-CCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEE
Q 022769          172 NYGVDKYD-IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (292)
Q Consensus       172 ~~~~~~~~-~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~  236 (292)
                      ..+..+.. ...|+.++.+.+++-..+.....                     ..+||+|+.|.+.
T Consensus       220 s~~~~~~~~~~~GLa~~~i~~~~~~~l~~~~~---------------------~~~Dp~G~~i~~~  264 (265)
T COG2514         220 SRGARPRNANASGLAWLEIHTPDPEKLDATGT---------------------RLTDPWGIVIRVV  264 (265)
T ss_pred             cCCCCCCCCCCCCcceEEEEcCCccccccccc---------------------ceecCCCceEEEe
Confidence            76654432 34588899998887543211100                     1289999998875

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.77  E-value=1.5e-17  Score=129.69  Aligned_cols=115  Identities=29%  Similarity=0.323  Sum_probs=85.6

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      +++|+|++|.|+|++++++||+++|||++.....  +   ..+++.......++.+.+...       ...+++|++|.|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~---~~~~~~~~~~~~~~~~~l~~~-------~~~~~~hiaf~v   69 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--Q---GRVYLKAWDEFDHHSIVLREA-------DTAGLDFMGFKV   69 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--C---ceEEEEccCCCcccEEEeccC-------CCCCeeEEEEEe
Confidence            6799999999999999999999999999866531  1   124554322222334444321       123789999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          192 E---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       192 ~---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      .   |++++.++|+++|+++...|.....+....+|++|||||+||++..
T Consensus        70 ~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  119 (122)
T cd07265          70 LDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYAD  119 (122)
T ss_pred             CCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEe
Confidence            7   6899999999999998765544444455689999999999999865

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.77  E-value=2.5e-17  Score=130.91  Aligned_cols=118  Identities=25%  Similarity=0.324  Sum_probs=89.7

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~  192 (292)
                      .+|+|++|.|+|++++++||+++|||++.....  .   ...|+..++...++.+.+.....     ...|++|++|.|+
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v~   71 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEVG   71 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEeC
Confidence            589999999999999999999999999876532  1   24566654323344555544221     1358999999999


Q ss_pred             CHHHHH---HHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC
Q 022769          193 DVAKTV---DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       193 Dl~~~~---~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                      |++++.   ++|+++|+++...+..++.+...++|++||+|++|||.....
T Consensus        72 d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~  122 (134)
T cd08360          72 DIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMD  122 (134)
T ss_pred             CHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcccc
Confidence            877665   699999999877666666556677999999999999997543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.76  E-value=7e-18  Score=137.33  Aligned_cols=119  Identities=26%  Similarity=0.379  Sum_probs=89.5

Q ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCC-CCceEEEEEeeCCCC---ceEEEEEEecCCCCCCcCCCceEEEEE
Q 022769          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP-EDRYTNAFLGYGPED---SHFVVELTYNYGVDKYDIGTGFGHFGI  189 (292)
Q Consensus       114 ~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~~---~~~~l~l~~~~~~~~~~~g~g~~hia~  189 (292)
                      +|+||+|.|+|++++++||+++||+++..+...+ .+....+|+..+...   .++.+.+...       .+.|++|++|
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-------~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQG-------PESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhcC-------CCCceeEEEE
Confidence            5899999999999999999999999987654332 233356777654321   1111222111       1358999999


Q ss_pred             eeCCHHHHH---HHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          190 AVEDVAKTV---DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       190 ~V~Dl~~~~---~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      .|+|++++.   ++|+++|+++.++++.+..+...++|++||+|++|||+...
T Consensus        74 ~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          74 EVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             EcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence            999999876   99999999998887777666667889999999999999664

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=7.2e-17  Score=129.18  Aligned_cols=123  Identities=26%  Similarity=0.316  Sum_probs=88.0

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCC-----------CceEEEEEeeCCCCceEEEEEEecCCC--C--
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----------DRYTNAFLGYGPEDSHFVVELTYNYGV--D--  176 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~~~~l~l~~~~~~--~--  176 (292)
                      +.+|+||+|.|+|++++++||++ |||++..+...++           ......++....  ....+++.....+  .  
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--g~~~iel~~~~~~~~~~~   77 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPD--GHSRLELSKFHHPAVIAD   77 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCC--CCceEEEEEecCCCCcCc
Confidence            46899999999999999999998 9998865432211           122334444322  2345665542111  1  


Q ss_pred             ---CCcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          177 ---KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       177 ---~~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                         ....+.|++|+||.|+|+++++++|+++|+++..++.... +..+.+|++||||+.|||+|.
T Consensus        78 ~~~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~-~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          78 HRPAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYE-NSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecC-CCeEEEEEECCCCCEEEeeec
Confidence               1112458999999999999999999999999877655443 356778999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=8.6e-17  Score=126.31  Aligned_cols=115  Identities=46%  Similarity=0.897  Sum_probs=86.4

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCC-----------CceEEEEEeeCCCCceEEEEEEecCCCCCCcCC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----------DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG  181 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g  181 (292)
                      .++.|++|.|+|+++|++||+++|||++..+...++           +.+...++..++...+..+++....+..++..|
T Consensus         1 ~~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g   80 (127)
T cd08358           1 RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELG   80 (127)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCC
Confidence            378999999999999999999999999877664444           344445566544445678888876665555555


Q ss_pred             CceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          182 TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       182 ~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      .+  |++|.|++. ++.++|+++|+++...+.    +   +++++||||+.|||+.
T Consensus        81 ~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~----~---~~fi~DPDG~~ie~~~  126 (127)
T cd08358          81 ND--FLGITIHSK-QAVSNAKKHNWPVTEVED----G---VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CC--EEEEEEECH-HHHHHHHHCCCceecCCC----C---EEEEECCCCCEEEEec
Confidence            55  666666666 556999999998875433    2   6789999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK11478 putative lyase; Provisional

Probab=99.75  E-value=6.7e-17  Score=126.96  Aligned_cols=123  Identities=20%  Similarity=0.255  Sum_probs=83.8

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCC---CCCCcCCCceEEE
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG---VDKYDIGTGFGHF  187 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~---~~~~~~g~g~~hi  187 (292)
                      .+.+|+||+|.|+|++++.+||+++|||++..+...+........+..++   +..+++.....   .+......|++|+
T Consensus         3 ~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~g~~hi   79 (129)
T PRK11478          3 GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNG---QYVIELFSFPFPPERPSRPEACGLRHL   79 (129)
T ss_pred             CcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCC---CcEEEEEEecCCCCCCCCCCCCceeEE
Confidence            35689999999999999999999999999864322111111111222222   23455543211   1111123478999


Q ss_pred             EEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          188 GIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       188 a~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      +|.|+|+++++++|+++|+++...+.. +.++.+++|++||+|+.||+++
T Consensus        80 ~f~v~d~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         80 AFSVDDIDAAVAHLESHNVKCEAIRVD-PYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEEeCCHHHHHHHHHHcCCeeeccccC-CCCCCEEEEEECCCCCEEEEEe
Confidence            999999999999999999997643222 2234567899999999999986

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.73  E-value=1.7e-16  Score=130.37  Aligned_cols=124  Identities=30%  Similarity=0.360  Sum_probs=86.4

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEe----eC--------------CCCceEEEEEeeCCCCceEEEEEEecCC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKR----DI--------------PEDRYTNAFLGYGPEDSHFVVELTYNYG  174 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~----~~--------------~~~~~~~~~l~~g~~~~~~~l~l~~~~~  174 (292)
                      ++|+||+|.|+|++++++||+++|||++..+.    ..              ....+..+++..++   ...+++.....
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~~   79 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFKN   79 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEeccC
Confidence            58999999999999999999999999885321    00              01124455665443   23466665432


Q ss_pred             CCCC-c----CCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCee-c-CC-CCeEEEEEECCCCCEEEEEEcC
Q 022769          175 VDKY-D----IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGP-V-KG-GNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       175 ~~~~-~----~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~-~-~~-g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      .... .    .+.|++|++|.|+|+++++++|+++|+++...+.. . +. ...+++|++||||+.|||++..
T Consensus        80 ~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  152 (162)
T TIGR03645        80 QENPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHS  152 (162)
T ss_pred             CCCCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcC
Confidence            2111 1    13589999999999999999999999875433211 1 11 1246899999999999999864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.73  E-value=1.1e-16  Score=144.52  Aligned_cols=159  Identities=16%  Similarity=0.232  Sum_probs=105.1

Q ss_pred             hhhhhhhhhcCCeeeeccCCCCCCCee-ecCCcc-chhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCC
Q 022769           71 AKALKLLRAEGSTIEASTSGNMAPTSN-TVTEQN-VLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE  148 (292)
Q Consensus        71 ~~~~~~~d~dg~~~~~~~~~~~~~a~~-~~~p~g-~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~  148 (292)
                      .....|.||+|+.+++........... ...+.. ...+....+++|+||.|.|+|++++++||+++|||++......+.
T Consensus       100 g~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~  179 (303)
T TIGR03211       100 GRRVRFTLPSGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGD  179 (303)
T ss_pred             ceEEEEECCCCCEEEEEEccccccccccccCCcccccccCCcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCC
Confidence            356779999999999886544221100 000000 001111236799999999999999999999999999876543333


Q ss_pred             Cce-EEEEEeeCCCCceEEEEEEecCCCCCCcCCCc-eEEEEEeeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEE
Q 022769          149 DRY-TNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG-FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIA  223 (292)
Q Consensus       149 ~~~-~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g-~~hia~~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~  223 (292)
                      +.. ...|+..+...+  .+.+...       .+.| ++|++|.|+|   +++++++|+++|+++..+|..+..+..+++
T Consensus       180 ~~~~~~~~~~~~~~~~--~~~~~~~-------~~~g~~~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~  250 (303)
T TIGR03211       180 GKEQAAAWLSVSNKAH--DIAFVGD-------PEPGKLHHVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTI  250 (303)
T ss_pred             CcEEEEEEEEcCCCCc--ccceecC-------CCCCceEEEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEE
Confidence            322 345565433222  2222211       1224 9999999997   555788999999998877766554445789


Q ss_pred             EEECCCCCEEEEEEc
Q 022769          224 FIEDPDGYKFELLER  238 (292)
Q Consensus       224 y~~DPdG~~iel~e~  238 (292)
                      ||+||+|++||++..
T Consensus       251 y~~DPdG~~iEl~~~  265 (303)
T TIGR03211       251 YFFDPSGNRNETFGG  265 (303)
T ss_pred             EEECCCCCEEEEecC
Confidence            999999999999844

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.73  E-value=2.1e-16  Score=141.91  Aligned_cols=156  Identities=23%  Similarity=0.307  Sum_probs=103.9

Q ss_pred             hhhhhhhhhcCCeeeeccCCCCCCCeeecCCccchhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCc
Q 022769           71 AKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR  150 (292)
Q Consensus        71 ~~~~~~~d~dg~~~~~~~~~~~~~a~~~~~p~g~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~  150 (292)
                      .+.+.|.||+|+.+++..+....... .....   .+....+++|+||+|.|+|++++.+||+++|||++......+.+.
T Consensus        97 ~~~~~~~DPdG~~iEl~~~~~~~~~~-~~~~~---~~~~~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~  172 (294)
T TIGR02295        97 PEALRVEDPFGYPIEFYFEMEKVERL-LRRYH---RHRGVSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGN  172 (294)
T ss_pred             ceEEEEECCCCCEEEEEEchhhcccc-ccccc---ccCCccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCc
Confidence            35667778888888776543311000 00000   011124789999999999999999999999999987654333333


Q ss_pred             eEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCC---HHHHHHHHHHcCCe--eecCCeecCCCCeEEEEE
Q 022769          151 YTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED---VAKTVDLVKAKGGK--VTREPGPVKGGNTVIAFI  225 (292)
Q Consensus       151 ~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~D---l~~~~~~L~~~G~~--i~~~p~~~~~g~~~~~y~  225 (292)
                      ....|+......  +.+.+...       .+.+++|+||.|+|   ++++.++|+++|++  +...|+.+..+...++|+
T Consensus       173 ~~~~~~~~~~~~--~~~~~~~~-------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~  243 (294)
T TIGR02295       173 LAAAWLHRKGGV--HDIALTNG-------NGPRLHHIAYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYL  243 (294)
T ss_pred             EEEEEEecCCCc--CceEeecC-------CCCceeeEEEEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEE
Confidence            334555443322  23333221       23589999999998   55668899999987  666666554455677999


Q ss_pred             ECCCCCEEEEEEcC
Q 022769          226 EDPDGYKFELLERG  239 (292)
Q Consensus       226 ~DPdG~~iel~e~~  239 (292)
                      +||+|++||+++..
T Consensus       244 ~DP~G~~iEl~~~~  257 (294)
T TIGR02295       244 RDPDGHRIELYTGD  257 (294)
T ss_pred             ECCCCCEEEEEecc
Confidence            99999999999754

The enzyme from Bacillus brevis contains manganese.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.73  E-value=1.6e-16  Score=129.48  Aligned_cols=122  Identities=22%  Similarity=0.340  Sum_probs=92.0

Q ss_pred             cCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCC---CCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEE
Q 022769          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP---EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH  186 (292)
Q Consensus       110 ~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~---~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~h  186 (292)
                      +..++|+||+|.|+|++++++||+++|||++.......   +.....+|+..+..++  .+.+....      .+.+++|
T Consensus         5 ~~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~i~~~~~~------~~~g~~H   76 (154)
T cd07237           5 TGDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHH--SLALAEGP------GPKRIHH   76 (154)
T ss_pred             cCCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCC--CEEEEcCC------CCceeEE
Confidence            45679999999999999999999999999986643221   1133466776644322  33343321      1348999


Q ss_pred             EEEeeCCH---HHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          187 FGIAVEDV---AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       187 ia~~V~Dl---~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      ++|.|+|+   +++.++|+++|+++..++..++.+..+++|++||+|++|||....
T Consensus        77 iaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~  132 (154)
T cd07237          77 LMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGG  132 (154)
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCc
Confidence            99999875   468999999999998777766666778899999999999998664

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.73  E-value=3.8e-16  Score=124.49  Aligned_cols=120  Identities=21%  Similarity=0.254  Sum_probs=89.6

Q ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCC------CcCCCceEEEE
Q 022769          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK------YDIGTGFGHFG  188 (292)
Q Consensus       115 i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~------~~~g~g~~hia  188 (292)
                      |+|+.|.|.|++++++||+++|||++......+  .....++..+    ...+.+........      ...+.++.|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQG----DINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEcC----CEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            589999999999999999999999998764322  1223334322    24455544222111      11345899999


Q ss_pred             EeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC
Q 022769          189 IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       189 ~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                      |.|+|+++++++|+++|+++..+|...+ +..+.++++||+|+.|||+++...
T Consensus        75 ~~V~Dvda~~~~l~~~G~~v~~~p~~~~-~~~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          75 FRVDDAAAAYERAVARGAKPVQEPVEEP-GELKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             EEeCCHHHHHHHHHHcCCeEccCceecC-CeEEEEEEeccCCcEEEEEecCCC
Confidence            9999999999999999999988887744 456788999999999999997654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=2.3e-16  Score=122.43  Aligned_cols=121  Identities=30%  Similarity=0.372  Sum_probs=83.9

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCC--C-CCCcCCCceEEEEE
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG--V-DKYDIGTGFGHFGI  189 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~--~-~~~~~g~g~~hia~  189 (292)
                      ++|+|++|.|.|++++.+||+++|||++......++.......+... ..  ..+++.....  . .....+.|++|++|
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~--~~i~l~~~~~~~~~~~~~~~~g~~h~~~   78 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLN-GG--YQLELFSFPNPPERPSYPEACGLRHLAF   78 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecC-CC--cEEEEEEcCCCCCCCCCCcCCCceEEEE
Confidence            58999999999999999999999999987654322211112222221 22  2334332211  1 11113458999999


Q ss_pred             eeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          190 AVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       190 ~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      .|+|+++++++|+++|+++..++... .+..+++|++||+|++|||+|
T Consensus        79 ~v~d~~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          79 SVEDIEAAVKHLKAKGVEVEPIRVDE-FTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EeCCHHHHHHHHHHcCCccccccccC-CCceEEEEEECCCCCEEEecC
Confidence            99999999999999999987654332 334567899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=2.1e-16  Score=122.96  Aligned_cols=118  Identities=24%  Similarity=0.397  Sum_probs=84.8

Q ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCC---CcCCCceEEEEEe
Q 022769          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK---YDIGTGFGHFGIA  190 (292)
Q Consensus       114 ~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~---~~~g~g~~hia~~  190 (292)
                      +|+|++|.|+|++++++||+++|||++......+...+...|+..++   ...+++........   .....|+.|++|.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            58999999999999999999999999865443333334455666542   23456654322111   1223488999999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEE
Q 022769          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  235 (292)
Q Consensus       191 V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel  235 (292)
                      |+|   +++++++|+++|+++..+|...+.| .+.++++|||||.|||
T Consensus        78 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g-~~~~~~~DPdG~~iE~  124 (125)
T cd07241          78 VGSKEAVDELTERLRADGYLIIGEPRTTGDG-YYESVILDPEGNRIEI  124 (125)
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEeCceecCCC-eEEEEEECCCCCEEEe
Confidence            964   8999999999999998766544443 3346799999999998

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PLN02300 lactoylglutathione lyase

Probab=99.72  E-value=4.9e-16  Score=139.16  Aligned_cols=144  Identities=46%  Similarity=0.763  Sum_probs=106.3

Q ss_pred             eeecCCccchhh-hc--cCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEec
Q 022769           96 SNTVTEQNVLDW-VK--SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN  172 (292)
Q Consensus        96 ~~~~~p~g~~~w-~~--~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~  172 (292)
                      .++.||+|...- .+  ....++.|+.|.|+|++++.+||+++|||++......++..+..+++..++......+++...
T Consensus       133 ~~~~DPdG~~iEl~~~~~~~~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~  212 (286)
T PLN02300        133 AFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYN  212 (286)
T ss_pred             EEEECCCCCEEEEEeCCCCCCcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeec
Confidence            456777762211 11  124578899999999999999999999999986544444556667765543322334555444


Q ss_pred             CCCCCCcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       173 ~~~~~~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      .+..++..+++++|++|.|+|+++++++++++|+++..+|...++...+.++++||+|+.++|++..
T Consensus       213 ~~~~~~~~g~~~~~i~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~  279 (286)
T PLN02300        213 YGVTEYTKGNAYAQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNI  279 (286)
T ss_pred             CCCCccccCCceeEEEEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccc
Confidence            3333344567899999999999999999999999999888877754456788999999999999864

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.72  E-value=1.1e-16  Score=124.61  Aligned_cols=120  Identities=28%  Similarity=0.404  Sum_probs=86.3

Q ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeC--CCCceEEEEEeeCCCCceEEEEEEecCCCCCCcC---CCceEEEE
Q 022769          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI--PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI---GTGFGHFG  188 (292)
Q Consensus       114 ~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~--~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~---g~g~~hia  188 (292)
                      ||+||+|.|+|++++++||+++|||++......  ........++..+..  ++.+.............   ..+.+|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEG--HIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSS--CEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccccc--ceeeeeeccccccccccccccccceeEE
Confidence            699999999999999999999999999987652  222334445544433  34444444332222111   01345666


Q ss_pred             EeeC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEE
Q 022769          189 IAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  235 (292)
Q Consensus       189 ~~V~---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel  235 (292)
                      +.+.   |+++++++|++.|+++..++.....+...++|++||+|+.|||
T Consensus        79 ~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            6655   6888999999999999988877777777878999999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.71  E-value=4.1e-16  Score=124.73  Aligned_cols=116  Identities=23%  Similarity=0.432  Sum_probs=86.0

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      +++|+|+.|.|+|++++++||+++|||++..+..      ..+++..++    ..+.+......+....+.+++|++|.+
T Consensus         2 i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~g----~~l~l~~~~~~~~~~~~~~~~hiaf~v   71 (139)
T PRK04101          2 LKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLNG----LWIALNEEKDIPRNEIHQSYTHIAFSI   71 (139)
T ss_pred             CCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecCC----eEEEeeccCCCCCccCCCCeeEEEEEe
Confidence            5789999999999999999999999999875522      234554432    233333322222212234788999999


Q ss_pred             C--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          192 E--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       192 ~--Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      +  |+++++++++++|+++..++...+. ..+.+|++||+|++||+.+.
T Consensus        72 ~~~dv~~~~~~l~~~G~~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~  119 (139)
T PRK04101         72 EEEDFDHWYQRLKENDVNILPGRERDER-DKKSIYFTDPDGHKFEFHTG  119 (139)
T ss_pred             cHHHHHHHHHHHHHCCceEcCCccccCC-CceEEEEECCCCCEEEEEeC
Confidence            8  8999999999999998766555543 45789999999999999854

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.71  E-value=3.8e-16  Score=121.63  Aligned_cols=114  Identities=21%  Similarity=0.309  Sum_probs=84.3

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .+.+|+|++|.|+|++++.+||+++|||++..+.+      ..+++...+...++.+.+...       ...+++|++|.
T Consensus         3 ~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~-------~~~~~~h~af~   69 (121)
T cd09013           3 DIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES-------PEAGLGHIAWR   69 (121)
T ss_pred             CccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC-------CCCceEEEEEE
Confidence            47799999999999999999999999999876532      135565433223344554432       12489999999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          191 VE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       191 V~---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      |+   |+++++++++++|+++...+...  +.+..+|++||+|+++|++...
T Consensus        70 v~~~~~v~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          70 ASSPEALERRVAALEASGLGIGWIEGDP--GHGKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             cCCHHHHHHHHHHHHHcCCccccccCCC--CCcceEEEECCCCCEEEEEEec
Confidence            97   48889999999999874332222  3445789999999999998653

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.71  E-value=4.9e-16  Score=128.20  Aligned_cols=123  Identities=22%  Similarity=0.350  Sum_probs=90.0

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .+.+|+|+.|.|+|++++++||+++|||++........+.....|+......  +.+.+.....    ....+++|++|.
T Consensus         3 ~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~~~~~----~~~~~~~hiaf~   76 (166)
T cd09014           3 GVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKV--HDVAYTRDPA----GARGRLHHLAYA   76 (166)
T ss_pred             CcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCc--eeEEEecCCC----CCCCCceEEEEE
Confidence            4779999999999999999999999999987654333333344666554322  2333332211    112378999999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       191 V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      |+|   +++++++|+++|+++..+|..+..+...++|++||+|++||+++..
T Consensus        77 v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  128 (166)
T cd09014          77 LDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGGG  128 (166)
T ss_pred             CCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEcC
Confidence            986   5578899999999987666665544556799999999999999874

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.71  E-value=3.9e-16  Score=127.58  Aligned_cols=119  Identities=20%  Similarity=0.216  Sum_probs=85.7

Q ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCC-CcCCCceEEEEEeeC
Q 022769          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFGHFGIAVE  192 (292)
Q Consensus       114 ~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-~~~g~g~~hia~~V~  192 (292)
                      +|+||+|.|+|++++.+||+++|||++..+..   +  ...+...+. ..+..+.+........ .....+++|++|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            58999999999999999999999999976642   1  223333221 2234566655422221 112247899999999


Q ss_pred             C---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC
Q 022769          193 D---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       193 D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                      |   +++++++|+++|+.+.. +.  ..+..+++|++||+|+.||+++..+.
T Consensus        75 d~~dvd~~~~~L~~~Gv~~~~-~~--~~~~~~s~yf~DPdG~~iEl~~~~~~  123 (157)
T cd08347          75 DDEELEAWKERLEALGLPVSG-IV--DRFYFKSLYFREPGGILFEIATDGPG  123 (157)
T ss_pred             CHHHHHHHHHHHHHCCCCccc-cc--ccccEEEEEEECCCCcEEEEEECCCC
Confidence            8   89999999999998643 22  23456789999999999999987643

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.71  E-value=3.1e-16  Score=125.90  Aligned_cols=112  Identities=21%  Similarity=0.282  Sum_probs=86.7

Q ss_pred             EEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCC--
Q 022769          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED--  193 (292)
Q Consensus       116 ~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~D--  193 (292)
                      +||.|.|+|++++++||+++|||++..+...     ..+|+...+...++.+.+...       ...+++|++|.|+|  
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~~~-------~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVGPA-------SSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeeccC-------CCCceEEEEEECCCHH
Confidence            5999999999999999999999998766321     357776544333344433221       12489999999986  


Q ss_pred             -HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          194 -VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       194 -l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                       +++++++|+++|+++..+|..++.+..+.+|++||+|+.||+....
T Consensus        69 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  115 (141)
T cd07258          69 DIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGM  115 (141)
T ss_pred             HHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCc
Confidence             5577999999999998888777666677899999999999998654

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.71  E-value=2.8e-16  Score=122.15  Aligned_cols=114  Identities=27%  Similarity=0.356  Sum_probs=84.3

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      +++|+|++|.|+|++++++||+++|||++.....      ..+++.......+..+.+...       ...++.|++|.|
T Consensus         2 ~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~hi~~~v   68 (121)
T cd07266           2 ILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD------DRIYLRGLEEFIHHSLVLTKA-------PVAGLGHIAFRV   68 (121)
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC------CeEEEEecCCCceEEEEEeeC-------CCCceeEEEEEC
Confidence            6799999999999999999999999999865421      134554322222334444332       123788999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          192 E---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       192 ~---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      .   |+++++++++++|+++...|.....+...++|+.||+|++||++..
T Consensus        69 ~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          69 RSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             CCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            5   6889999999999998765444444455789999999999999854

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=7.6e-16  Score=120.17  Aligned_cols=118  Identities=25%  Similarity=0.409  Sum_probs=86.4

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCC-CCCcCCCceEEEEEee
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-DKYDIGTGFGHFGIAV  191 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~-~~~~~g~g~~hia~~V  191 (292)
                      ++|+|+.|.|+|++++.+||+++|||++.....      ..+++..++  ....+.+...... .......++.|++|.|
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v   72 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILL   72 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEEC
Confidence            589999999999999999999999999976632      135555443  2334455443322 1122345889999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC
Q 022769          192 ED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       192 ~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                      ++   +++++++|+++|+++... ..  .+..+++|++||+|+++||....|.
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~-~~--~~~~~~~~~~DPdG~~iEi~~~~~~  122 (125)
T cd07255          73 PSRADLAAALRRLIELGIPLVGA-SD--HLVSEALYLSDPEGNGIEIYADRPR  122 (125)
T ss_pred             CCHHHHHHHHHHHHHcCCceecc-cc--ccceeEEEEECCCCCEEEEEEecCc
Confidence            74   889999999999987532 22  2345679999999999999987664

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.70  E-value=6.6e-16  Score=126.77  Aligned_cols=118  Identities=25%  Similarity=0.395  Sum_probs=84.1

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~  192 (292)
                      ++|+||.|.|+|++++++||+++|||++......+.+.....++..+...  ..+.+...       .+.+++|++|.|+
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~--~~i~l~~~-------~~~~~~Hiaf~v~   72 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGV--HDTALTGG-------NGPRLHHVAFWVP   72 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCc--ceEEEecC-------CCCceeEEEEEcC
Confidence            58999999999999999999999999987544332333334555543322  23333321       2347999999998


Q ss_pred             C---HHHHHHHHHHcCCe--eecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          193 D---VAKTVDLVKAKGGK--VTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       193 D---l~~~~~~L~~~G~~--i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      |   +++++++|+++|+.  +..+|+.+..+...++|++||+|+.||+++..
T Consensus        73 ~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          73 EPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            6   77788999999986  33344443333456799999999999999654

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1e-15  Score=118.77  Aligned_cols=118  Identities=29%  Similarity=0.455  Sum_probs=85.4

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCC---CCCcCCCceEEEE
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV---DKYDIGTGFGHFG  188 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~---~~~~~g~g~~hia  188 (292)
                      +++|+|+.|.|+|++++++||+++|||+........  .  ...+..++    ..+++......   .....+.|..|++
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~--~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~hi~   72 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--G--RKALRFGS----QKINLHPVGGEFEPAAGSPGPGSDDLC   72 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC--C--ceEEEeCC----EEEEEecCCCccCcCccCCCCCCceEE
Confidence            468999999999999999999999999987653211  1  23343332    23444432211   1122345889999


Q ss_pred             EeeCC-HHHHHHHHHHcCCeeecCCeecCC--CCeEEEEEECCCCCEEEEEE
Q 022769          189 IAVED-VAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       189 ~~V~D-l~~~~~~L~~~G~~i~~~p~~~~~--g~~~~~y~~DPdG~~iel~e  237 (292)
                      |.+++ +++++++|+++|+++..+|....+  +..+.+|++||+|++||+.+
T Consensus        73 ~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          73 LITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             EEecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            99975 999999999999998776654322  34577899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.69  E-value=6.1e-16  Score=121.30  Aligned_cols=112  Identities=16%  Similarity=0.226  Sum_probs=84.0

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      +.+|+||+|.|+|++++.+||+++|||++..+..      ..+|+..+..  ++.+.+....        ++..|++|+|
T Consensus         4 ~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~i~l~~~~--------~~~~~iaf~v   67 (124)
T cd08361           4 LQDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDAR--DHTLVYIEGD--------PAEQASGFEL   67 (124)
T ss_pred             EEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCc--cEEEEEEeCC--------CceEEEEEEE
Confidence            5789999999999999999999999999865421      2466765432  2334443321        2567999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCeecC--CCCeEEEEEECCCCCEEEEEEcC
Q 022769          192 ED---VAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       192 ~D---l~~~~~~L~~~G~~i~~~p~~~~--~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      +|   +++++++++++|+++...+....  .+...++||+|||||.||++...
T Consensus        68 ~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          68 RDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             CCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            85   99999999999998866543221  23456789999999999998654

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.68  E-value=9.4e-16  Score=119.38  Aligned_cols=113  Identities=19%  Similarity=0.273  Sum_probs=83.8

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~  192 (292)
                      ++|+||+|.|+|++++++||+++|||++..+..  .   ..+++..++.  ++.+.+....       ..++.|++|.+.
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~--~~~~~l~~~~-------~~~~~~~~f~v~   66 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPE--D---GALYLRMDDR--AWRIAVHPGE-------ADDLAYAGWEVA   66 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCC--C---CeEEEEccCC--ceEEEEEeCC-------CCceeEEEEEEC
Confidence            479999999999999999999999999865421  1   2356655433  3445554321       237889999997


Q ss_pred             C---HHHHHHHHHHcCCeeecCCeec--CCCCeEEEEEECCCCCEEEEEEcC
Q 022769          193 D---VAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       193 D---l~~~~~~L~~~G~~i~~~p~~~--~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      +   +++++++|+++|+++...+...  ..+...++|++||||+.||++..+
T Consensus        67 ~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          67 DEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             CHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence            4   8889999999999987654322  234457899999999999998643

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.68  E-value=2.1e-15  Score=119.22  Aligned_cols=116  Identities=29%  Similarity=0.435  Sum_probs=87.2

Q ss_pred             EEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHH
Q 022769          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVA  195 (292)
Q Consensus       116 ~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~  195 (292)
                      +||.|.|+|++++++||+++||+++......+ +.....|+..++..  ..+.+.....      ..++.|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~--~~l~~~~~~~------~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDEDH--HDLALFPGPE------RPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCCc--ceEEEEcCCC------CCCeeEEEEEcCCHH
Confidence            59999999999999999999999987654432 33345677655432  2344433211      348999999999864


Q ss_pred             ---HHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC
Q 022769          196 ---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       196 ---~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                         +++++++++|+++..++...+.+..+++|++||+|++|||++..+
T Consensus        72 ~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          72 DILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             HHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence               688999999999887766555555678899999999999997654

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.68  E-value=8.7e-16  Score=120.15  Aligned_cols=119  Identities=31%  Similarity=0.498  Sum_probs=83.7

Q ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCC-C-----CcCCCceEEE
Q 022769          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD-K-----YDIGTGFGHF  187 (292)
Q Consensus       114 ~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~-~-----~~~g~g~~hi  187 (292)
                      +|+|++|.|+|++++++||+++|||++......++.....+++..++    ..+++....... .     ...+.|++|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGN----TKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCC----EEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            58999999999999999999999999876543333344455665432    244444321111 0     0124588999


Q ss_pred             EEeeCCHHHHHHHHHHcCCeeecC-CeecCCCCeEEEEE--ECCCCCEEEEEE
Q 022769          188 GIAVEDVAKTVDLVKAKGGKVTRE-PGPVKGGNTVIAFI--EDPDGYKFELLE  237 (292)
Q Consensus       188 a~~V~Dl~~~~~~L~~~G~~i~~~-p~~~~~g~~~~~y~--~DPdG~~iel~e  237 (292)
                      +|.|+|+++++++|+++|+++..+ |....+ +....|+  +||||+.||+.|
T Consensus        77 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~-g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETLKEKGVRLIDEEPRIGAG-GKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHCCCcccCCCCccCCC-CCEEEEecccccCcEEEEecC
Confidence            999999999999999999998754 333323 3345566  799999999974

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.68  E-value=2.4e-15  Score=115.79  Aligned_cols=111  Identities=27%  Similarity=0.436  Sum_probs=85.2

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~  192 (292)
                      ++|+|+.|.|+|++++++||+++|||++.....      ..+++..+. ..++.+.+....       ..++.|++|.|+
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~-------~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSE-DDHHSLVLTEGD-------EPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCC-CCcEEEEEEeCC-------CCCceeEEEEcC
Confidence            589999999999999999999999999886642      235666542 223444443321       237889999998


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          193 ---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       193 ---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                         +++++.++++++|+++...+...+ +..+.+|+.||+|+++|++..
T Consensus        67 ~~~~v~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          67 SEEDLEALAAHLEAAGVAPEEASDPEP-GVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CHHHHHHHHHHHHHcCCceEEcCccCC-CCceEEEEECCCCCEEEEEEc
Confidence               588999999999999877655333 355778999999999999965

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.67  E-value=2.7e-15  Score=118.78  Aligned_cols=118  Identities=19%  Similarity=0.232  Sum_probs=82.7

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCC-ceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      +.+|+|+.|.|+|++++++||+++|||++..+...... .....++..+.    ..+++......    ...+++|++|.
T Consensus         2 i~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~i~l~~~~~~----~~~~~~Hiaf~   73 (131)
T cd08364           2 IEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGG----LWIAIMEGDSL----QERTYNHIAFK   73 (131)
T ss_pred             cccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCC----eEEEEecCCCC----CCCCceEEEEE
Confidence            57899999999999999999999999987665321100 00011222221    24445432211    12378999999


Q ss_pred             eC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          191 VE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       191 V~--Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      |+  |++++.++|+++|+++..+ .....+.++++||+|||||.|||.+.
T Consensus        74 v~~~~ld~~~~~l~~~gv~~~~~-~~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          74 ISDSDVDEYTERIKALGVEMKPP-RPRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             cCHHHHHHHHHHHHHCCCEEecC-CccccCCceEEEEECCCCCEEEEecC
Confidence            98  6999999999999987643 23334456789999999999999854

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=3.5e-15  Score=116.99  Aligned_cols=116  Identities=22%  Similarity=0.371  Sum_probs=85.6

Q ss_pred             ceEEEEEEcCCHHHHHHHHHHhc---CCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCC---CcCCCceEEE
Q 022769          114 RMLHVVYRVGDLDKTIKFYTECL---GMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK---YDIGTGFGHF  187 (292)
Q Consensus       114 ~i~Hv~L~V~Dle~a~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~---~~~g~g~~hi  187 (292)
                      +|+||+|.|.|++++.+||+++|   ||++.....  .   ...|...   ..+..+.+........   ...+.|++|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~---~~~~~~~---~~~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D---GRSWRAG---DGGTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c---CceEEec---CCceEEEEEecccCCCcccccCCcCeeEE
Confidence            58999999999999999999999   999877642  1   1233332   2235566665433221   1234578999


Q ss_pred             EEeeCC---HHHHHHHHHHcCCeeecCCeec--CCCCeEEEEEECCCCCEEEEEE
Q 022769          188 GIAVED---VAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       188 a~~V~D---l~~~~~~L~~~G~~i~~~p~~~--~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      +|.|+|   +++++++|+++|+++...+...  ..+..+++|++||+|++|||+.
T Consensus        73 a~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~  127 (128)
T cd07242          73 AFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVA  127 (128)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEe
Confidence            999974   8899999999999988766542  2345678999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=2.1e-15  Score=115.89  Aligned_cols=117  Identities=24%  Similarity=0.290  Sum_probs=83.3

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCC--CcCCCceEEEEEeeCCH
Q 022769          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK--YDIGTGFGHFGIAVEDV  194 (292)
Q Consensus       117 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~--~~~g~g~~hia~~V~Dl  194 (292)
                      ||+|.|.|++++.+||+++|||++..+....+ ....+.+..... ....+.+........  .....+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS-PETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC-CeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            89999999999999999999999987653222 222233322211 134555554332211  11234788999999999


Q ss_pred             HHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          195 AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       195 ~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      ++++++++++|+++..++...  +..+.+|++||+|++|||++
T Consensus        79 ~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEELKARGVEFSEEPREM--PYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHhCCCEEeeccccC--CCceEEEEECCCCCEEEEeC
Confidence            999999999999998776333  34578999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.67  E-value=2.3e-15  Score=121.27  Aligned_cols=113  Identities=22%  Similarity=0.419  Sum_probs=84.8

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~  192 (292)
                      .+|+|+.|.|.|++++++||+++|||++.....  +   ...|+..+...+  .+.+...       ...+++|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~~~--~~~l~~~-------~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSDHH--SIAIARG-------PHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCCcc--eEEEccC-------CCCceEEEEEECC
Confidence            489999999999999999999999999865421  1   246676654432  3344321       1247899999999


Q ss_pred             CHHHH---HHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          193 DVAKT---VDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       193 Dl~~~---~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      |++++   +++|+++|+++...+.....+...++||+||+|+.|||++..
T Consensus        69 d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~  118 (144)
T cd07239          69 SIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSEL  118 (144)
T ss_pred             CHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCc
Confidence            87766   489999999987665554444456789999999999999764

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.67  E-value=2.4e-15  Score=119.09  Aligned_cols=113  Identities=23%  Similarity=0.377  Sum_probs=80.6

Q ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCC-
Q 022769          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED-  193 (292)
Q Consensus       115 i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~D-  193 (292)
                      |+||.|.|+|++++++||+++|||++.....      ...++..++    ..+.+......+......+++|++|.|++ 
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIGG----TWLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeCc----eEEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            6899999999999999999999999865421      123444432    23444332221111123478999999974 


Q ss_pred             -HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          194 -VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       194 -l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                       +++++++|+++|+++..++.... +..+.+|++||+|++||+.+.
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~-~~~~~~~f~DPdG~~iEl~~~  115 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDV-RDRKSIYFTDPDGHKLEVHTG  115 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCcccc-CcceEEEEECCCCCEEEEecC
Confidence             99999999999999765443332 245789999999999999854

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.67  E-value=2.7e-15  Score=116.71  Aligned_cols=120  Identities=23%  Similarity=0.307  Sum_probs=82.8

Q ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCC-ceEEEEEeeCCCCceEEEEEEecCCCCC--CcCCCceEEEEEe
Q 022769          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-RYTNAFLGYGPEDSHFVVELTYNYGVDK--YDIGTGFGHFGIA  190 (292)
Q Consensus       114 ~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~--~~~g~g~~hia~~  190 (292)
                      +|+||+|.|.|++++.+||+++|||++..+....+. .....++.......+..+++........  .....+++|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            589999999999999999999999998776543221 1122333322112223566654322211  1122378999999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEE
Q 022769          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (292)
Q Consensus       191 V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~  236 (292)
                      |+|   +++++++++++|+++...+. .  ++.+.+|++||+|++||++
T Consensus        81 v~~~~~~~~~~~~~~~~g~~~~~~~~-~--~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERLRAAGVPVSGVVD-H--FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHHHHcCCcccceEe-e--cceEEEEEECCCCCEEEeC
Confidence            984   79999999999998865332 2  3567899999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.66  E-value=3.3e-15  Score=115.67  Aligned_cols=113  Identities=26%  Similarity=0.343  Sum_probs=83.0

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      +.+|+|+.|.|+|++++++||+++|||+......    .  .+++..++. .++.+.+...       ...+++|++|.|
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~v   66 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----G--IVYLRATGS-EHHILRLRRS-------DRNRLDVVSFSV   66 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----C--EEEEECCCC-ccEEEEeccC-------CCCCCceEEEEe
Confidence            3689999999999999999999999999865422    1  345543332 2334443321       123678999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeecC-CCCeEEEEEECCCCCEEEEEEc
Q 022769          192 E---DVAKTVDLVKAKGGKVTREPGPVK-GGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       192 ~---Dl~~~~~~L~~~G~~i~~~p~~~~-~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      +   ++++++++++++|+++..++.... .+..+.+|++||+|++||++..
T Consensus        67 ~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  117 (120)
T cd08362          67 ASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSAD  117 (120)
T ss_pred             CCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEec
Confidence            5   689999999999999876654332 2345678999999999999865

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.65  E-value=7.1e-15  Score=112.87  Aligned_cols=114  Identities=24%  Similarity=0.231  Sum_probs=82.9

Q ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCH
Q 022769          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDV  194 (292)
Q Consensus       115 i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl  194 (292)
                      +.|+.|.|+|++++++||+++||+++..... +...  .+++..++.   ..+.+.......  ....+..|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~--~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGD--YAVFSTGGG---AVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCc--eEEEEeCCc---cEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            4799999999999999999999999876542 1122  344444431   122333222111  1223567899999999


Q ss_pred             HHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          195 AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       195 ~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      ++++++|+++|+++..+|...+ +..+.+|++||+|+.|+|++
T Consensus        73 ~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARVEAAGGKVLVPPTDIP-GVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHCCCEEEeCCcccC-CcEEEEEEECCCCCEEEeEC
Confidence            9999999999999988877665 45578999999999999974

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=2.1e-15  Score=114.54  Aligned_cols=113  Identities=28%  Similarity=0.365  Sum_probs=81.2

Q ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCC-CcCCCceEEEEEeeCC
Q 022769          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFGHFGIAVED  193 (292)
Q Consensus       115 i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-~~~g~g~~hia~~V~D  193 (292)
                      |+|++|.|+|++++++||+++|||++..+...+   ....++..++.   ..+++........ ...+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~---~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGDG---PQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCCC---cEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            689999999999999999999999986543221   12355555443   1334443222211 1123477899999999


Q ss_pred             HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEE
Q 022769          194 VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  235 (292)
Q Consensus       194 l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel  235 (292)
                      +++++++++++|+++..++..  ....+.+|++||+|++||+
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVP--GDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCC--CCCccEEEEECCCCCEEeC
Confidence            999999999999998776543  2244678999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.65  E-value=6.3e-15  Score=113.46  Aligned_cols=110  Identities=22%  Similarity=0.296  Sum_probs=80.4

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      +++|+|+.|.|+|++++.+||++ |||++..+..      ..+|+..++.. ++.+.....       ...++.|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~------~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD------DELYYRGYGTD-PFVYVARKG-------EKARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC------CeEEEecCCCc-cEEEEcccC-------CcCcccEEEEEE
Confidence            46899999999999999999999 9999865531      13555543332 233322111       124788999999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       192 ~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      +|.+++.+.+++.|......+. .+. ..+++||+||+||.||++..
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLE-APG-GGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCC-CCC-CceEEEEECCCCCEEEEEec
Confidence            9999999999999998754332 233 34678999999999999854

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.64  E-value=2.3e-14  Score=113.37  Aligned_cols=120  Identities=25%  Similarity=0.424  Sum_probs=84.3

Q ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCC
Q 022769          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED  193 (292)
Q Consensus       114 ~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~D  193 (292)
                      +|+|+.|.|+|++++++||+++|||++......    ....++..+.. .+..+.+.............+++|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDPD-EHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecCC-CceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            589999999999999999999999998765321    12455554311 2234444443222111223488999999997


Q ss_pred             HH---HHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC
Q 022769          194 VA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       194 l~---~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                      ++   +++++|.++|+++...+.   .+..+.+|++||+|++|||+...+.
T Consensus        76 ~~~v~~~~~~l~~~G~~~~~~~~---~~~~~~~~~~DP~G~~ie~~~~~~~  123 (134)
T cd08348          76 LDDLRDLYERLRAAGITPVWPVD---HGNAWSIYFRDPDGNRLELFVDTPW  123 (134)
T ss_pred             HHHHHHHHHHHHHCCCCccccCC---CCceeEEEEECCCCCEEEEEEcCCC
Confidence            54   578999999998765432   2345788999999999999976544

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.63  E-value=1.1e-14  Score=113.79  Aligned_cols=111  Identities=16%  Similarity=0.264  Sum_probs=81.5

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~  192 (292)
                      +++.|+.|.|+|++++++||+++|||+.....    +.  .+++..++   +..+.+....      ...+..|++|.++
T Consensus         3 ~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~--~~~~~~~~---~~~l~~~~~~------~~~~~~h~a~~v~   67 (123)
T cd08351           3 VTLNHTIVPARDREASAEFYAEILGLPWAKPF----GP--FAVVKLDN---GVSLDFAQPD------GEIPPQHYAFLVS   67 (123)
T ss_pred             ceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CC--EEEEEcCC---CcEEEEecCC------CCCCcceEEEEeC
Confidence            58999999999999999999999999986532    11  12333322   2344444321      1125679999887


Q ss_pred             --CHHHHHHHHHHcCCeeecCCeec------CCCCeEEEEEECCCCCEEEEEEc
Q 022769          193 --DVAKTVDLVKAKGGKVTREPGPV------KGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       193 --Dl~~~~~~L~~~G~~i~~~p~~~------~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                        |+++++++|+++|+++..+|...      ..++.+.+||+||||+.||+++.
T Consensus        68 ~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          68 EEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             HHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence              69999999999999986665443      12456889999999999999986

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.63  E-value=7.8e-15  Score=114.49  Aligned_cols=119  Identities=30%  Similarity=0.521  Sum_probs=85.6

Q ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCC-CCceEEEEEeeCCCCceEEEEEEecCCC-CC-----CcCCCceEEE
Q 022769          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP-EDRYTNAFLGYGPEDSHFVVELTYNYGV-DK-----YDIGTGFGHF  187 (292)
Q Consensus       115 i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~~~~~~l~l~~~~~~-~~-----~~~g~g~~hi  187 (292)
                      |+||+|.|+|++++.+||+++|||+........ +.....+++..+    ...+++...... ..     ...+.|+.|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999997654432 223345666543    245555543221 11     1245689999


Q ss_pred             EEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCC--CCEEEEEE
Q 022769          188 GIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD--GYKFELLE  237 (292)
Q Consensus       188 a~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPd--G~~iel~e  237 (292)
                      +|.|+|+++++++++++|+++..++.....++..+.++.+|+  |++|||++
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            999999999999999999999877664444444555555555  99999974

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.62  E-value=5.7e-14  Score=129.45  Aligned_cols=158  Identities=22%  Similarity=0.345  Sum_probs=108.3

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCC------CcCCCceEE
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK------YDIGTGFGH  186 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~------~~~g~g~~h  186 (292)
                      ++++|+.+.|+|++++.+||.+.|||+.........+. ....+..+    ...+++........      ...|.|+.|
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~~G----~~~l~L~~~~~~~s~~~~~~~~hg~gv~~   75 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLRQG----QINFVLTAPYSSDSPAADFAAKHGDGVKD   75 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEEeC----CEEEEEecCCCCCchHHHHHHhCCCceEE
Confidence            47899999999999999999999999998763222222 12223322    24566654322210      125679999


Q ss_pred             EEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC---------------------C----
Q 022769          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------------T----  241 (292)
Q Consensus       187 ia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~---------------------~----  241 (292)
                      ++|.|+|+++++++++++|+.+..+|.....|.....-++.++|..+.|+++..                     .    
T Consensus        76 iaf~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (353)
T TIGR01263        76 VAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVG  155 (353)
T ss_pred             EEEEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCCCCCCCCCCCccccccccccccCCCCCC
Confidence            999999999999999999999876655431122222223444455555444210                     0    


Q ss_pred             CCCceeeeeecC--CHHHHHHHHHHhcCCEEEeeec
Q 022769          242 PEPLCQVMLRVG--DLDRAINFYKKAFGMELLRKRD  275 (292)
Q Consensus       242 ~~~l~hv~l~v~--D~~~s~~fY~~~lG~~~~~~~~  275 (292)
                      -.+++|++++|.  |+++++.||+++|||++....+
T Consensus       156 ~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~  191 (353)
T TIGR01263       156 LIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFD  191 (353)
T ss_pred             eEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEE
Confidence            115899999999  9999999999999999987544

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=1e-14  Score=113.36  Aligned_cols=114  Identities=19%  Similarity=0.209  Sum_probs=78.9

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEe----cCCCCCCcCCCceEEEE
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY----NYGVDKYDIGTGFGHFG  188 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~----~~~~~~~~~g~g~~hia  188 (292)
                      +++.|+.|.|+|++++++||+++||+++.....    ..  ..+. +.    ..+....    .........+.+..|++
T Consensus         1 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~--~~~~-~~----~~l~~~~~~~~~~~~~~~~~~~~~~~l~   69 (120)
T cd09011           1 MKFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG----EN--VTFE-GG----FALQEGYSWLEGISKADIIEKSNNFELY   69 (120)
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCEEeeccC----ce--EEEe-cc----ceeccchhhhccCCcccccccCCceEEE
Confidence            478999999999999999999999999864321    11  1111 11    1111110    00011111233557999


Q ss_pred             EeeCCHHHHHHHHHHcCC-eeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          189 IAVEDVAKTVDLVKAKGG-KVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       189 ~~V~Dl~~~~~~L~~~G~-~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      |.|+|+++++++|+++|+ ++..+|...++| .+.+|++|||||+|||.+.
T Consensus        70 ~~v~dvd~~~~~l~~~g~~~~~~~~~~~~~g-~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          70 FEEEDFDAFLDKLKRYDNIEYVHPIKEHPWG-QRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             EEehhhHHHHHHHHhcCCcEEecCcccCCCc-cEEEEEECCCCCEEEEecc
Confidence            999999999999999986 677777766654 5678999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK06724 hypothetical protein; Provisional

Probab=99.62  E-value=2.1e-14  Score=113.36  Aligned_cols=111  Identities=16%  Similarity=0.247  Sum_probs=77.3

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhc---CCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEE
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECL---GMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia  188 (292)
                      +.+|+||.|.|+|++++++||+++|   |++......         + .  ...  ..+.+......  .....|..|+|
T Consensus         5 ~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~---------~-~--~g~--~~l~l~~~~~~--~~~~~g~~h~a   68 (128)
T PRK06724          5 RAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVA---------Y-S--TGE--SEIYFKEVDEE--IVRTLGPRHIC   68 (128)
T ss_pred             CcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEe---------e-e--CCC--eeEEEecCCcc--ccCCCCceeEE
Confidence            5689999999999999999999966   666532111         1 0  111  11222211110  01234788999


Q ss_pred             Eee---CCHHHHHHHHHHcCCeeecCCeecCC--CCeEEEEEECCCCCEEEEEEc
Q 022769          189 IAV---EDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       189 ~~V---~Dl~~~~~~L~~~G~~i~~~p~~~~~--g~~~~~y~~DPdG~~iel~e~  238 (292)
                      |.|   +|+++++++|+++|+++..+|...+.  ++.+++||+||||+.||+...
T Consensus        69 f~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~  123 (128)
T PRK06724         69 YQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYT  123 (128)
T ss_pred             EecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeC
Confidence            998   57999999999999998777765432  345788999999999999865

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=3.6e-14  Score=109.96  Aligned_cols=113  Identities=28%  Similarity=0.409  Sum_probs=80.4

Q ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCC------CCcCCCceEEEE
Q 022769          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD------KYDIGTGFGHFG  188 (292)
Q Consensus       115 i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~------~~~~g~g~~hia  188 (292)
                      |.||+|.|.|++++++||+++|||++....   ++.  .+++..++. .  .+.+.......      ......++.|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~---~~~--~~~l~~~~~-~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKE---DRR--LAFFWVGGR-G--MLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecC---CCc--eEEEEcCCC-c--EEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            578999999999999999999999987641   122  355555543 2  23333321110      111234788999


Q ss_pred             EeeC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          189 IAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       189 ~~V~--Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      |.++  |++++++++.++|+++...+. . .+..+.+|++||+|++||+++
T Consensus        73 ~~v~~~dl~~~~~~l~~~g~~~~~~~~-~-~~~~~~~~~~DP~G~~ie~~~  121 (122)
T cd08354          73 FAIPAEELAEWEAHLEAKGVAIESEVQ-W-PRGGRSLYFRDPDGNLLELAT  121 (122)
T ss_pred             EEcCHHHHHHHHHHHHhcCCceecccc-C-CCCeeEEEEECCCCCEEEEec
Confidence            9985  799999999999998865543 2 334567999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=3.5e-14  Score=109.84  Aligned_cols=111  Identities=19%  Similarity=0.224  Sum_probs=78.7

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCC-----CCcCCCceEEEEEee
Q 022769          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD-----KYDIGTGFGHFGIAV  191 (292)
Q Consensus       117 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~-----~~~~g~g~~hia~~V  191 (292)
                      +..|.|+|++++++||+++|||++.....    .  ...+..++.  ...+.+.......     ....+.++ |++|.|
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~~~~-~~~~~v   74 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD----W--YVSLRSPDG--GVELAFMLPGHETVPAAQYQFQGQGL-ILNFEV   74 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC----c--EEEEecCCC--ceEEEEccCCCCCCcchhcccCCceE-EEEEEE
Confidence            56799999999999999999999876521    1  233333322  2344443321110     11123344 899999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       192 ~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      +|+++++++++++|+++..+|...+.| .+.++++||+|++|||+|
T Consensus        75 ~did~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          75 DDVDAEYERLKAEGLPIVLPLRDEPWG-QRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CCHHHHHHHHHhcCCCeeeccccCCCc-ceEEEEECCCCCEEEEEC
Confidence            999999999999999987777666554 567899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.59  E-value=2.4e-14  Score=111.55  Aligned_cols=108  Identities=29%  Similarity=0.474  Sum_probs=77.8

Q ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee--
Q 022769          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV--  191 (292)
Q Consensus       114 ~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V--  191 (292)
                      +|+|+.|.|+|++++.+||+++|||++.....  +    ..++..+.  ..+.+.+...  .   ....++.|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~----~~~~~~~~--~~~~l~~~~~--~---~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K----GAYLEAGD--LWLCLSVDAN--V---GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C----ceEEecCC--EEEEEecCCC--C---CCCCCeeeEEEEeCH
Confidence            58999999999999999999999999865532  1    24444332  2223322211  1   1234788999998  


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       192 ~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      +|+++++++++++|+++..++..    ....+||+||||++|||+..
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~----~~~~~~f~DPdG~~ie~~~~  110 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTS----EGDSFYFLDPDGHKLELHVG  110 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCC----CccEEEEECCCCCEEEEEeC
Confidence            47999999999999987544322    23578999999999999964

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=4.5e-14  Score=109.96  Aligned_cols=114  Identities=25%  Similarity=0.308  Sum_probs=78.4

Q ss_pred             eEEEEEEcCCHHHHHHHHHHh---cCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          115 MLHVVYRVGDLDKTIKFYTEC---LGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       115 i~Hv~L~V~Dle~a~~FY~~v---LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      |+|+.|.|+|++++++||+++   ||++...+..  + .  .+++..+....  .+.+......... ...+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~--~-~--~~~~~~~~~~~--~~~l~~~~~~~~~-~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG--P-G--AVGYGKGGGGP--DFWVTKPFDGEPA-TAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC--C-c--eeEeccCCCCc--eEEEeccccCCCC-CCCCceEEEEEC
Confidence            579999999999999999998   6998865431  1 1  23333322222  3333332211111 122457999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCeecCC--CCeEEEEEECCCCCEEEEE
Q 022769          192 ED---VAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELL  236 (292)
Q Consensus       192 ~D---l~~~~~~L~~~G~~i~~~p~~~~~--g~~~~~y~~DPdG~~iel~  236 (292)
                      +|   ++++++++.++|+.+..+|...+.  ...+++|++||+|+.|||+
T Consensus        73 ~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            86   788999999999998777665543  3445789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=7.5e-14  Score=108.60  Aligned_cols=114  Identities=20%  Similarity=0.227  Sum_probs=80.9

Q ss_pred             EEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCC----CcCCCceEEEEEeeCCH
Q 022769          119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK----YDIGTGFGHFGIAVEDV  194 (292)
Q Consensus       119 ~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~----~~~g~g~~hia~~V~Dl  194 (292)
                      .|.|+|++++++||+++||+++......+++....+.+..++  .  .+.+........    ...+.+..|++|.|+|+
T Consensus         4 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~--~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~   79 (122)
T cd08355           4 TLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGD--G--GVMVGSVRDDYRASSARAGGAGTQGVYVVVDDV   79 (122)
T ss_pred             EEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECC--E--EEEEecCCCcccccccccCCCceEEEEEEECCH
Confidence            489999999999999999999987653333333334454432  1  222322111111    11234567899999999


Q ss_pred             HHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          195 AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       195 ~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      ++++++++++|+++..+|...+.| .+.++++||||++|+|.+
T Consensus        80 d~~~~~l~~~G~~v~~~~~~~~~g-~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          80 DAHYERARAAGAEILREPTDTPYG-SREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHHHCCCEEeeCccccCCC-cEEEEEECCCCCEEEEec
Confidence            999999999999998887776654 466899999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=6.7e-14  Score=109.03  Aligned_cols=117  Identities=20%  Similarity=0.280  Sum_probs=77.8

Q ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEe---c---CC--CCCCcCCCceEE
Q 022769          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY---N---YG--VDKYDIGTGFGH  186 (292)
Q Consensus       115 i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~---~---~~--~~~~~~g~g~~h  186 (292)
                      +.|+.|.|+|++++.+||+++|||+......  .+.+.  .+..+  ...+.+....   .   ..  ........+..|
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDYG--ELETG--ETTLAFASHDLAESNLKGGFVKADPAQPPAGFE   74 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcEE--EecCC--cEEEEEEcccccccccccCccCCccccCCCcEE
Confidence            4799999999999999999999999865422  11121  11111  1111111110   0   00  011111123358


Q ss_pred             EEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       187 ia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      ++|.|+|+++++++++++|+++..++...++| .+.++++||+|+.||++++
T Consensus        75 ~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          75 IAFVTDDVAAAFARAVEAGAVLVSEPKEKPWG-QTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEcCCHHHHHHHHHHcCCEeccCCccCCCC-cEEEEEECCCCCEEEEecC
Confidence            99999999999999999999988777666654 4568999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=4.1e-14  Score=110.12  Aligned_cols=113  Identities=24%  Similarity=0.341  Sum_probs=75.2

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCC-----CCCCcCCCceEEEEE--
Q 022769          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG-----VDKYDIGTGFGHFGI--  189 (292)
Q Consensus       117 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~-----~~~~~~g~g~~hia~--  189 (292)
                      ||.|.|+|++++++||+++|||++.....    .  ...+..+  +..+.+.+.....     ........+..|+++  
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----T--WVDFDFF--GHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----C--ccccccc--CcEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            89999999999999999999999864321    1  1222222  2233443332110     000111224567654  


Q ss_pred             eeCCHHHHHHHHHHcCCeeecCCeecC---CCCeEEEEEECCCCCEEEEEE
Q 022769          190 AVEDVAKTVDLVKAKGGKVTREPGPVK---GGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       190 ~V~Dl~~~~~~L~~~G~~i~~~p~~~~---~g~~~~~y~~DPdG~~iel~e  237 (292)
                      .++|+++++++|+++|+++..+|....   .+..+.+|++|||||+|||.+
T Consensus        74 ~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            567899999999999999887665421   234578999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.58  E-value=4.7e-14  Score=107.99  Aligned_cols=109  Identities=23%  Similarity=0.380  Sum_probs=77.3

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeC--CH
Q 022769          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE--DV  194 (292)
Q Consensus       117 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~--Dl  194 (292)
                      ||.|.|+|++++++||+++|||++..+..      ...++..+.    ..+.+.......  ..+.+++|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~------~~~~~~~~~----~~l~~~~~~~~~--~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS------KEAYFELAG----LWICLMEEDSLQ--GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC------ceeEEEecC----eEEEeccCCCcC--CCCCCccEEEEEcCHHHH
Confidence            89999999999999999999999865532      123444331    234443322111  12347789999995  69


Q ss_pred             HHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          195 AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       195 ~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      ++++++++++|+++...+. ...+..+.+|++||+|++||++..
T Consensus        69 ~~~~~~l~~~G~~~~~~~~-~~~~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERLKALGVEMKPERP-RVQGEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHHcCCccCCCcc-ccCCCceEEEEECCCCCEEEEEeC
Confidence            9999999999999864322 222345789999999999999853

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=1.2e-13  Score=105.83  Aligned_cols=108  Identities=21%  Similarity=0.251  Sum_probs=78.3

Q ss_pred             EEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHHH
Q 022769          118 VVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKT  197 (292)
Q Consensus       118 v~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~~  197 (292)
                      ..|.|+|++++++||+++|||+.....    +  ...++..+.. .++.+.+......     +....|++|.|+|++++
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~~----~--~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~i~~~v~d~~~~   71 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMDH----G--WIATFASPQN-MTVQVSLATEGGT-----ATVVPDLSIEVDDVDAA   71 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEcC----C--ceEEEeecCC-CCcEEEEecCCCC-----CCCCCEEEEEeCCHHHH
Confidence            458999999999999999999986431    1  2234443332 2334444432111     12456999999999999


Q ss_pred             HHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          198 VDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       198 ~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      +++|+++|+++..++...++ +.+.+|+.||+|++|++.++
T Consensus        72 ~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          72 LARAVAAGFAIVYGPTDEPW-GVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHhcCCeEecCCccCCC-ceEEEEEECCCCCEEEEEEc
Confidence            99999999998877666554 34678999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=9.6e-14  Score=107.67  Aligned_cols=111  Identities=28%  Similarity=0.480  Sum_probs=78.2

Q ss_pred             EEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCC--
Q 022769          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED--  193 (292)
Q Consensus       116 ~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~D--  193 (292)
                      .|+.|.|+|++++.+||+++||++......    .+ ..|. .+..  .+.+.+.......    ..++.|++|.|+|  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~-~~~~-~~~~--~~~~~~~~~~~~~----~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD----DY-AKFL-LEDP--RLNFVLNERPGAP----GGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC----Ce-eEEE-ecCC--ceEEEEecCCCCC----CCCeeEEEEEeCCHH
Confidence            599999999999999999999998765421    11 2232 2222  2333333321111    1488999999987  


Q ss_pred             -HHHHHHHHHHcCCeeecCCeecC-CCCeEEEEEECCCCCEEEEEEc
Q 022769          194 -VAKTVDLVKAKGGKVTREPGPVK-GGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       194 -l~~~~~~L~~~G~~i~~~p~~~~-~g~~~~~y~~DPdG~~iel~e~  238 (292)
                       ++++++++.++|+++...+.... .+..+++|++||+|++|||++.
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  117 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVT  117 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEe
Confidence             78899999999999876543322 2234679999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=2.6e-13  Score=104.98  Aligned_cols=116  Identities=22%  Similarity=0.216  Sum_probs=83.4

Q ss_pred             EEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCC--CCcCCCceEEEEEeeCCHH
Q 022769          118 VVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD--KYDIGTGFGHFGIAVEDVA  195 (292)
Q Consensus       118 v~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~--~~~~g~g~~hia~~V~Dl~  195 (292)
                      ..|.|+|++++.+||+++||+++......+++......+..++.    .+.+....+..  ....+.+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDS----VLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCE----EEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            34889999999999999999999877554444444444544431    33443321110  1112346679999999999


Q ss_pred             HHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          196 KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       196 ~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      ++++++.+.|+++..++...+. +.+.++++||+|++|+|.+.
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~~~l~~~  122 (122)
T cd07246          81 ATFARAVAAGATSVMPPADQFW-GDRYGGVRDPFGHRWWIATH  122 (122)
T ss_pred             HHHHHHHHCCCeEecCcccccc-cceEEEEECCCCCEEEEecC
Confidence            9999999999999877765554 45678999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.56  E-value=1.2e-13  Score=104.68  Aligned_cols=108  Identities=23%  Similarity=0.272  Sum_probs=74.8

Q ss_pred             EEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHHHHH
Q 022769          120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVD  199 (292)
Q Consensus       120 L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~~~~  199 (292)
                      |.|+|++++++||+++|||++.....    .  .+.+..+.....-...+.....  ......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----D--YVDFSLGFRFHDGVIEFLQFPD--PPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----S--EEEEEETEEEEEEEEEEEEEES--SSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----C--eEEEEeccchhhhhHHHccCCc--cccCCCceeEEEEEEcCHHHHHH
Confidence            68999999999999999999988432    1  2333332110001122222111  12234478899999999999999


Q ss_pred             HHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEE
Q 022769          200 LVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (292)
Q Consensus       200 ~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~  236 (292)
                      +++++|+++..+|...+. +.+.++++||+|++|||+
T Consensus        73 ~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RLKELGAEIVTEPRDDPW-GQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHTTSEEEEEEEEETT-SEEEEEEE-TTS-EEEEE
T ss_pred             HHHHCCCeEeeCCEEcCC-CeEEEEEECCCCCEEEeC
Confidence            999999998877776554 457899999999999986

...

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.55  E-value=1.5e-13  Score=105.55  Aligned_cols=107  Identities=20%  Similarity=0.279  Sum_probs=73.6

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEE--Ee
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG--IA  190 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia--~~  190 (292)
                      ++|+||+|.|.|++++.+||+ .|||++..+..      ...+...+.  .+..+.+....       ..++.|++  +.
T Consensus         1 ~~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~------~~~~~~~~~--~~~~~~~~~~~-------~~~~~~~~~~~~   64 (112)
T cd08344           1 HSIDHFALEVPDLEVARRFYE-AFGLDVREEGD------GLELRTAGN--DHRWARLLEGA-------RKRLAYLSFGIF   64 (112)
T ss_pred             CceeEEEEecCCHHHHHHHHH-HhCCcEEeecC------ceEEEecCC--CceEEEeecCC-------CCceeeEEEEeE
Confidence            379999999999999999997 69999865421      122222222  23334443321       12455544  45


Q ss_pred             eCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          191 VEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       191 V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      ++|++++.++|+++|+++..++  .+. ....+||+||+||+|||...
T Consensus        65 ~~d~~~~~~~l~~~Gi~~~~~~--~~~-~~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          65 EDDFAAFARHLEAAGVALAAAP--PGA-DPDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             hhhHHHHHHHHHHcCCceecCC--CcC-CCCEEEEECCCCCEEEEecC
Confidence            5789999999999999987554  222 23468999999999999854

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.55  E-value=1.9e-13  Score=102.72  Aligned_cols=112  Identities=32%  Similarity=0.422  Sum_probs=82.7

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHH
Q 022769          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK  196 (292)
Q Consensus       117 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~  196 (292)
                      |+++.|+|++++.+||+++|||+.......  .....+++..+    ...+.+...........+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            889999999999999999999998877532  11234555443    235555554332221234578999999999999


Q ss_pred             HHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEE
Q 022769          197 TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  235 (292)
Q Consensus       197 ~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel  235 (292)
                      ++++|+++|+.+...+. ...+....+|+.||+|+.|||
T Consensus        75 ~~~~l~~~g~~~~~~~~-~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPR-EEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCc-CCCCCcEEEEEECCCCcEEeC
Confidence            99999999998876654 223456789999999999985

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.52  E-value=3.1e-13  Score=103.74  Aligned_cols=108  Identities=26%  Similarity=0.351  Sum_probs=77.3

Q ss_pred             EEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCC-CcCCCceEEEEEeeCC---
Q 022769          118 VVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFGHFGIAVED---  193 (292)
Q Consensus       118 v~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-~~~g~g~~hia~~V~D---  193 (292)
                      +.|.|+|++++++||+++||+++.....    .+  +.+..++.   ..+.++....... .....+..|++|.|+|   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~----~~--~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP----TF--ALFVLGSG---VKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC----ce--EEEEeCCC---cEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            5699999999999999999999765421    22  22332221   3445554332211 1123467899999986   


Q ss_pred             HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEE
Q 022769          194 VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (292)
Q Consensus       194 l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~  236 (292)
                      ++++++++.++|+++..+|...+.|  +.++++|||||+||++
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g--~~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFG--YTFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCc--cEEEEECCCCCEEEee
Confidence            8889999999999998777666544  4689999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.51  E-value=9.1e-13  Score=100.36  Aligned_cols=109  Identities=28%  Similarity=0.333  Sum_probs=77.6

Q ss_pred             EEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHHHH
Q 022769          119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV  198 (292)
Q Consensus       119 ~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~~~  198 (292)
                      .|.|+|++++++||+++|||++.....  ..  ..+++..+    +..+.+......... ...+..|++|.++|++++.
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~--~~~~~~~~----~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EP--GYAFLSRG----GAQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CC--cEEEEEeC----CEEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHHH
Confidence            489999999999999999999877643  11  12444432    234455443322211 2335668999999999999


Q ss_pred             HHHHHcCCe-eecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          199 DLVKAKGGK-VTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       199 ~~L~~~G~~-i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      ++++++|++ +..++...+. +.+.++++||+|+.|||+|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPW-GMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCc-ccEEEEEECCCCCEEEecC
Confidence            999999998 5555554443 4567899999999999975

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.49  E-value=9e-13  Score=102.41  Aligned_cols=112  Identities=20%  Similarity=0.179  Sum_probs=74.7

Q ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecC------CCCCCcCCCceEEEE
Q 022769          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY------GVDKYDIGTGFGHFG  188 (292)
Q Consensus       115 i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~------~~~~~~~g~g~~hia  188 (292)
                      |+||.|.|+|++++++||++ |||++.......    ..+.+..++ .  ..+.+....      +..+ ..+.+..|++
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~~----~~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~-~~~~~~~~l~   71 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADDE----PHVEAVLPG-G--VRLAWDTVESIRSFTPGWT-PTGGHRIALA   71 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCCC----CcEEEEeCC-C--EEEEEEcccceeeecCCCC-CCCCCcEEEE
Confidence            57999999999999999975 999975432210    122333321 1  222222110      1111 1122456788


Q ss_pred             EeeC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEE
Q 022769          189 IAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (292)
Q Consensus       189 ~~V~---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~  236 (292)
                      |.+.   |+++++++|+++|+++..+|...+.| .+.++++||+||.|||+
T Consensus        72 ~~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~  121 (122)
T cd07235          72 FLCETPAEVDALYAELVGAGYPGHKEPWDAPWG-QRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             EEcCCHHHHHHHHHHHHHCCCCcCCCCccCCCC-CEEEEEECCCCCEEEEe
Confidence            8765   79999999999999988777666554 45689999999999996

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.49  E-value=8.4e-13  Score=103.08  Aligned_cols=113  Identities=24%  Similarity=0.229  Sum_probs=75.9

Q ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCC-----CCCC--cCCCceEEE
Q 022769          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG-----VDKY--DIGTGFGHF  187 (292)
Q Consensus       115 i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~-----~~~~--~~g~g~~hi  187 (292)
                      +.++.|.|+|++++++||++ |||+.......+.    ..++..++   ...+.+.....     ....  ..+.+..|+
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~----~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l   72 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK----AACMVISD---NIFVMLLTEDFFQTFTPKPIADTKKSTEVLI   72 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC----eEEEEECC---ceEEEEEcHHHHhhccCCCcccCCCCCeEEE
Confidence            35788999999999999987 9999764322111    12333332   12344433110     0000  122355699


Q ss_pred             EEeeC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          188 GIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       188 a~~V~---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      +|.|+   |+++++++++++|+++..+|...++  .+.+|++|||||+||++.
T Consensus        73 ~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          73 SLSADSREEVDELVEKALAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             EEeCCCHHHHHHHHHHHHHCCCcccCCcccCCc--eEEEEEECCCCCEEEEEE
Confidence            99998   4889999999999999877665543  456899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.45  E-value=1.6e-12  Score=99.48  Aligned_cols=94  Identities=28%  Similarity=0.345  Sum_probs=75.0

Q ss_pred             EEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCC--cCCCceEEEEEeeCC
Q 022769          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY--DIGTGFGHFGIAVED  193 (292)
Q Consensus       116 ~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~--~~g~g~~hia~~V~D  193 (292)
                      +||+|.|+|+++|++||+++||++.......+.......++..+...  ..+++.++......  ..+.|++||+|.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~--~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGP--VQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTET--EEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCc--EEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            69999999999999999999999987776655666677777766533  57787775444321  256799999999999


Q ss_pred             HHHHHHHHHHcCCeeecC
Q 022769          194 VAKTVDLVKAKGGKVTRE  211 (292)
Q Consensus       194 l~~~~~~L~~~G~~i~~~  211 (292)
                      ++++.++|+++|+++...
T Consensus        79 ~d~~~~~l~~~G~~~~~~   96 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDE   96 (109)
T ss_dssp             HHHHHHHHHHTTECEEEC
T ss_pred             HHHHHHHHHHCCCEEccc
Confidence            999999999999998755

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.43  E-value=4.9e-12  Score=98.18  Aligned_cols=107  Identities=21%  Similarity=0.174  Sum_probs=73.4

Q ss_pred             EEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHHH
Q 022769          118 VVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKT  197 (292)
Q Consensus       118 v~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~~  197 (292)
                      ..|.|+|++++++||++ |||++......   .  .+++..++    ..+.+.......   ......|++|.|+|++++
T Consensus         6 ~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~---~--~~~~~~~~----~~l~l~~~~~~~---~~~~~~~~~~~v~dvd~~   72 (120)
T cd08350           6 PNLPSRDLDATEAFYAR-LGFSVGYRQAA---G--YMILRRGD----LELHFFAHPDLD---PATSPFGCCLRLPDVAAL   72 (120)
T ss_pred             ceeEcCCHHHHHHHHHH-cCCEEEecCCC---C--EEEEEcCC----EEEEEEecCcCC---CCCCcceEEEEeCCHHHH
Confidence            45999999999999999 99998765321   1  23343332    244554432111   111234789999999999


Q ss_pred             HHHHHHcCCeee-------cCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          198 VDLVKAKGGKVT-------REPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       198 ~~~L~~~G~~i~-------~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      +++|+++|+++.       .++...+ .+.+.++++||||++|||.+.
T Consensus        73 ~~~l~~~G~~~~~~~~~~~~~~~~~~-~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          73 HAEFRAAGLPETGSGIPRITPPEDQP-WGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHhCccccccCCCcccCCcCCC-CceeEEEEECCCCCEEEeecC
Confidence            999999999743       2222223 345779999999999999874

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.40  E-value=6.6e-12  Score=96.70  Aligned_cols=103  Identities=20%  Similarity=0.272  Sum_probs=70.6

Q ss_pred             EEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHHHH
Q 022769          119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV  198 (292)
Q Consensus       119 ~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~~~  198 (292)
                      .|.|+|++++++||++ |||++..+..    .  .+++..++    ..+.+...... ..   .+-.+++|.|+|+++++
T Consensus         6 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~--~~~l~~~~----~~l~l~~~~~~-~~---~~~~~~~~~v~did~~~   70 (113)
T cd08356           6 FIPAKDFAESKQFYQA-LGFELEWEND----N--LAYFRLGN----CAFYLQDYYVK-DW---AENSMLHLEVDDLEAYY   70 (113)
T ss_pred             ccccccHHHHHHHHHH-hCCeeEecCC----C--EEEEEcCC----EEEEeecCCCc-cc---ccCCEEEEEECCHHHHH
Confidence            4889999999999987 9999976531    1  35555432    23333321111 11   12247899999999999


Q ss_pred             HHHHHcCCeeec-----CCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          199 DLVKAKGGKVTR-----EPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       199 ~~L~~~G~~i~~-----~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      ++|+++|+++..     ++...++ +.+.++++|||||+|+|.+
T Consensus        71 ~~l~~~G~~~~~~~~~~~~~~~~~-g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          71 EHIKALGLPKKFPGVKLPPITQPW-WGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHcCCcccccceecCccccCC-CcEEEEEECCCccEEEeeC
Confidence            999999987432     2233333 4578999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.39  E-value=1.9e-11  Score=94.83  Aligned_cols=117  Identities=26%  Similarity=0.322  Sum_probs=82.3

Q ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCC
Q 022769          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED  193 (292)
Q Consensus       114 ~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~D  193 (292)
                      .+.|..|.|.|++++++||+++|||+........+  +....+..+.....-.+....  .   ..++..-..+.|.|+|
T Consensus         9 ~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~--~~y~~f~~~~~~~gG~l~~~~--~---~~p~~~~~~iy~~v~d   81 (127)
T COG3324           9 TIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGE--MRYAVFPADGAGAGGGLMARP--G---SPPGGGGWVIYFAVDD   81 (127)
T ss_pred             ccEEEeeecCCHHHHHHHHHHhhCceecccccCCC--ceEEEEECCCccccceeccCC--c---CCCCCCCEEEEEecCC
Confidence            34455599999999999999999999976644322  233444333221111221111  1   1121344568899999


Q ss_pred             HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          194 VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       194 l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      +++..+++.++|..+..++...++ .++.+.+.||.||+|.|++.
T Consensus        82 id~~l~rv~~~GG~V~~p~~~~p~-~G~~a~~~Dp~Gn~~~l~s~  125 (127)
T COG3324          82 IDATLERVVAAGGKVLRPKTEFPG-GGRIAHFVDPEGNRFGLWSP  125 (127)
T ss_pred             hHHHHHHHHhcCCeEEecccccCC-ceEEEEEECCCCCEEEEeec
Confidence            999999999999999999888875 55678899999999999864

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.39  E-value=5.8e-12  Score=97.24  Aligned_cols=110  Identities=26%  Similarity=0.339  Sum_probs=74.7

Q ss_pred             EEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCC------CCCCcCCCceEEEEEee
Q 022769          118 VVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG------VDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       118 v~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~------~~~~~~g~g~~hia~~V  191 (292)
                      |.|.|.|++++.+||+++|||++..+.   ..  ...++..++    ..+.+.....      ......+.+-.|+++.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~--~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---ND--GVAFFQLGG----LVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CC--ceEEEEcCC----eEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            679999999999999999999986551   11  234444322    3454443211      11111122333466655


Q ss_pred             ---CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          192 ---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       192 ---~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                         +|++++++++++.|+++..++...+.| .+.+|++||+||+||+..
T Consensus        73 ~~~~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARAAAAGATIVKPPQDVFWG-GYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHHHhCCCEEecCCccCCCC-ceEEEEECCCCCEEEEee
Confidence               579999999999999998776655543 677899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.35  E-value=1.3e-10  Score=107.24  Aligned_cols=158  Identities=23%  Similarity=0.299  Sum_probs=111.8

Q ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCC--ceEEEEEeeCCCCceEEEEEEecCCC-----------------
Q 022769          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGV-----------------  175 (292)
Q Consensus       115 i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~l~l~~~~~~-----------------  175 (292)
                      ++||++.|.|.+++..||+..|||+.+.......+  ......++.|    .+.+.+......                 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g----~i~fv~~~~~~~~~~~~~~~~~~~~~~~~   76 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSG----DLVFLFTAPYSPKIGAGDDDPASTAPHPS   76 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeC----CEEEEEeCCCCCccccccccccccccccc
Confidence            58999999999999999999999999876543222  1222333322    234444433111                 


Q ss_pred             --CC------CcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCC----CCeEEEEEECCCCCEEEEEEcCC---
Q 022769          176 --DK------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG----GNTVIAFIEDPDGYKFELLERGP---  240 (292)
Q Consensus       176 --~~------~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~----g~~~~~y~~DPdG~~iel~e~~~---  240 (292)
                        ..      ..+|+|+.-++|+|+|++++++++.++|++...+|.....    |.....-++.++|..+.|+++..   
T Consensus        77 ~~~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~~~~~  156 (398)
T PLN02875         77 FSSDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYKGFDG  156 (398)
T ss_pred             cCcHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccCCCCC
Confidence              00      0256899999999999999999999999998766554422    22344456677778887776420   


Q ss_pred             -----------------C---CCCceeeeeecCCHHHHHHHHHHhcCCEEEeeecC
Q 022769          241 -----------------T---PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDN  276 (292)
Q Consensus       241 -----------------~---~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~  276 (292)
                                       .   -.+|+|++++|.+++.+..||+++|||+.....+.
T Consensus       157 ~~f~p~f~~~~~~~~~~~~~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~  212 (398)
T PLN02875        157 AKFLPGYEPVESSSSFPLDYGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTA  212 (398)
T ss_pred             CccCCCcccccccccCCCCCCcceeCcceechhhHHHHHHHHHHhcCCeeeeeecc
Confidence                             0   11699999999999999999999999999865544

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.30  E-value=4.5e-11  Score=94.39  Aligned_cols=118  Identities=31%  Similarity=0.432  Sum_probs=80.6

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCc---------CCCc
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD---------IGTG  183 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~---------~g~g  183 (292)
                      +++.|+.|.+++..+...||...||++.......+..... +|+....    -.+++..+.+.....         .+.|
T Consensus        41 tr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~-v~~~~~~----~~~ELthn~Gtes~~~~~~~ngN~~prG  115 (170)
T KOG2944|consen   41 TRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVS-VFVFSRN----AKLELTHNWGTESPPDQAYLNGNKEPRG  115 (170)
T ss_pred             hhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCc-eEEeccc----CceeeecCCCCCCCcchhhcCCCCCCCc
Confidence            4777888888888888888888888876554332222222 4443322    256666654432211         1249


Q ss_pred             eEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCe-EEEEEECCCCCEEEEEEc
Q 022769          184 FGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNT-VIAFIEDPDGYKFELLER  238 (292)
Q Consensus       184 ~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~-~~~y~~DPdG~~iel~e~  238 (292)
                      ++||+|.|+|++++.++|+++|++....+   +.|.. ..+++.||||++||+...
T Consensus       116 fgHIci~V~di~sac~~lkekGV~f~Kk~---~dGk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  116 FGHICIEVDDINSACERLKEKGVRFKKKL---KDGKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             cceEEEEeCCHHHHHHHHHHhCceeeecC---CCccccceeEEECCCCCeEEEeec
Confidence            99999999999999999999999976443   23333 578899999999999854

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.21  E-value=1.6e-10  Score=97.40  Aligned_cols=98  Identities=26%  Similarity=0.386  Sum_probs=72.3

Q ss_pred             cceEEEEEEcC--CHHHHHHHHHHhcCCEEEEEeeCCC--CceEEEEEeeCCCCceEEEEEEecCCC--CC-------Cc
Q 022769          113 RRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYNYGV--DK-------YD  179 (292)
Q Consensus       113 ~~i~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~l~l~~~~~~--~~-------~~  179 (292)
                      ++|+||++.|+  |++++.+||+++|||+.......++  .......+..+.  ..+.+++......  ..       ..
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~--g~i~l~L~~~~~~~~~s~~~~fl~~~   79 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPD--GKIRIPLNEPASGKRKSQIQEFLEYY   79 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCC--CcEEEEEecCCCCCCccHHHHHHHHh
Confidence            57999999999  9999999999999999887654332  223334444322  3456666654331  11       11


Q ss_pred             CCCceEEEEEeeCCHHHHHHHHHHcCCeeecCC
Q 022769          180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP  212 (292)
Q Consensus       180 ~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p  212 (292)
                      .|.|++||||.|+|+++++++|+++|+++...|
T Consensus        80 ~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P  112 (191)
T cd07250          80 GGAGVQHIALATDDIFATVAALRARGVEFLPIP  112 (191)
T ss_pred             CCCceeEEEEECCCHHHHHHHHHHcCCeeccCc
Confidence            467999999999999999999999999987664

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=99.17  E-value=7.7e-11  Score=102.75  Aligned_cols=167  Identities=22%  Similarity=0.349  Sum_probs=115.1

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCC-----cCCCceE
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY-----DIGTGFG  185 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~-----~~g~g~~  185 (292)
                      ...+++||.+.|.|...+.+||...|||+.....+.+.+....+......+...+.+.-...+..+.+     .+|.|+.
T Consensus        14 ~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hgdgvk   93 (381)
T KOG0638|consen   14 KFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDGVK   93 (381)
T ss_pred             ceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccchh
Confidence            36799999999999999999999999999877543222110011111111111122221111111111     2567888


Q ss_pred             EEEEeeCCHHHHHHHHHHcCCeeecCCeecCC--CCeEEEEEECCCCCEEEEEEcCCC-----------------C----
Q 022769          186 HFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGPT-----------------P----  242 (292)
Q Consensus       186 hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~--g~~~~~y~~DPdG~~iel~e~~~~-----------------~----  242 (292)
                      .+||+|+|++++.+.+.++|+++..+|....+  |..+.+.+..+......++++...                 |    
T Consensus        94 dvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~FLPGF~~v~~~~~fp~l~~  173 (381)
T KOG0638|consen   94 DVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGPFLPGFEPVSSDALFPKLPK  173 (381)
T ss_pred             ceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccccccCCCCcccCccccccCCCCc
Confidence            99999999999999999999999888766543  556777777776666666655310                 1    


Q ss_pred             ---CCceeeeeecC--CHHHHHHHHHHhcCCEEEeeecCC
Q 022769          243 ---EPLCQVMLRVG--DLDRAINFYKKAFGMELLRKRDNP  277 (292)
Q Consensus       243 ---~~l~hv~l~v~--D~~~s~~fY~~~lG~~~~~~~~~~  277 (292)
                         .+++|++.+++  .++.+.+||.+.|||.-....+++
T Consensus       174 ~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~  213 (381)
T KOG0638|consen  174 GGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDS  213 (381)
T ss_pred             cceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcc
Confidence               27899999998  889999999999999988766544

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.16  E-value=1.1e-10  Score=98.09  Aligned_cols=170  Identities=28%  Similarity=0.482  Sum_probs=120.8

Q ss_pred             cccccccccchhhhhhhhhcCCeeeeccCCCCC---------------CCeeecCCccchhhhcc---CccceEEEEEEc
Q 022769           61 AAIPQSHFFGAKALKLLRAEGSTIEASTSGNMA---------------PTSNTVTEQNVLDWVKS---DKRRMLHVVYRV  122 (292)
Q Consensus        61 ~~~~~~~~~g~~~~~~~d~dg~~~~~~~~~~~~---------------~a~~~~~p~g~~~w~~~---~i~~i~Hv~L~V  122 (292)
                      +.++.+.++|...+.+.+ |...+.+.+++..+               ..+.+.+|+|....+..   ..-.+..|.|.|
T Consensus        79 FViELTYNYgV~~YelGn-dfg~i~I~s~dv~~~ve~v~~p~~~~~g~~~~~v~dPdGykF~l~~~~p~s~pv~~V~l~V  157 (299)
T KOG2943|consen   79 FVIELTYNYGVSKYELGN-DFGGITIASDDVFSKVEKVNAPGGKGSGCGIAFVKDPDGYKFYLIDRGPQSDPVLQVMLNV  157 (299)
T ss_pred             EEEEEEeccCccceeccC-CcccEEEeHHHHHHHHHHhcCcCCcccceEEEEEECCCCcEEEEeccCCCCCCeEEEEEEe
Confidence            466788888888888877 66667665554322               12457788885554431   245788999999


Q ss_pred             CCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeC--CHHHHHHH
Q 022769          123 GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE--DVAKTVDL  200 (292)
Q Consensus       123 ~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~--Dl~~~~~~  200 (292)
                      .|++++++||.+.|||++...    +.+++.+.+++++++  +.|++....+...+.  .|+..++|.++  ++..+.+.
T Consensus       158 gdL~ks~kyw~~~lgM~ilek----eek~t~~~mgYgd~q--~~LElt~~~~~id~~--kg~griafaip~d~~~~l~e~  229 (299)
T KOG2943|consen  158 GDLQKSIKYWEKLLGMKILEK----EEKYTRARMGYGDEQ--CVLELTYNYDVIDRA--KGFGRIAFAIPTDDLPKLQEA  229 (299)
T ss_pred             hhHHHHHHHHHHHhCcchhhh----hhhhhhhhhccCCcc--eEEEEEeccCccccc--ccceeEEEeccccccccHHHH
Confidence            999999999999999999875    234567888888775  788998877665544  35556666664  68888888


Q ss_pred             HHHcCCeeecCCeecCC---CCeEEEEEECCCCCEEEEEEcC
Q 022769          201 VKAKGGKVTREPGPVKG---GNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       201 L~~~G~~i~~~p~~~~~---g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      ++..+.++..+....+.   -....+-+.||||+.+.|+...
T Consensus       230 iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde  271 (299)
T KOG2943|consen  230 IKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDE  271 (299)
T ss_pred             HHHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccH
Confidence            88887666544333322   1234566789999999999553

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.03  E-value=4.3e-09  Score=78.74  Aligned_cols=116  Identities=28%  Similarity=0.351  Sum_probs=79.9

Q ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCc----CCCceEEEE-
Q 022769          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD----IGTGFGHFG-  188 (292)
Q Consensus       114 ~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~----~g~g~~hia-  188 (292)
                      -+-|+++.|+|++++++||-++||.+.-...        ..|+...-.++.+.+.+.........+    .+.-+-|++ 
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRst--------d~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGv   75 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRST--------DTWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGV   75 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhccccccccc--------ceEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceE
Confidence            4569999999999999999999999874432        245555555666666655432211111    111223554 


Q ss_pred             -EeeCCHHHHHHHHHHcCCeeecCCeecC---CCCeEEEEEECCCCCEEEEEE
Q 022769          189 -IAVEDVAKTVDLVKAKGGKVTREPGPVK---GGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       189 -~~V~Dl~~~~~~L~~~G~~i~~~p~~~~---~g~~~~~y~~DPdG~~iel~e  237 (292)
                       +.++|--++.++|+++|+....+|...-   .|....+++.||.||.+|+-.
T Consensus        76 Vl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~  128 (138)
T COG3565          76 VLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKG  128 (138)
T ss_pred             EEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeec
Confidence             5567888899999999988766554432   256778899999999999964

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.96  E-value=2.4e-09  Score=82.59  Aligned_cols=122  Identities=26%  Similarity=0.430  Sum_probs=72.8

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCce---EEEEEeeCCCCceEEEEE--------EecCCCC-CCcC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRY---TNAFLGYGPEDSHFVVEL--------TYNYGVD-KYDI  180 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~---~~~~l~~g~~~~~~~l~l--------~~~~~~~-~~~~  180 (292)
                      ++++||.|.|+|++++++||+++||+++...........   ...+..............        ....... ....
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            479999999999999999999999999987754322211   111211110000000000        0000000 0001


Q ss_pred             C-CceEEEEEeeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          181 G-TGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       181 g-~g~~hia~~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      + .+..|+++.+.+   .......+...|..+..... ...+  ..+|++||||+.||+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~--~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRGG--VHVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCcc--eEEEEECCCCcEEEeeC
Confidence            1 247799999998   56666677777887654333 2222  27999999999999973

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.95  E-value=4.9e-09  Score=96.72  Aligned_cols=100  Identities=20%  Similarity=0.357  Sum_probs=71.1

Q ss_pred             CccceEEEEEEcC--CHHHHHHHHHHhcCCEEEEEeeCCC--CceEEEEEeeCCCCceEEEEEEecCC---CC------C
Q 022769          111 DKRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYNYG---VD------K  177 (292)
Q Consensus       111 ~i~~i~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~l~l~~~~~---~~------~  177 (292)
                      .+++|+||++.|.  |++++.+||+++|||+.........  .......+...  .+.+.+++..+..   ..      .
T Consensus       155 ~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~--~g~~~i~L~ep~~~~~~s~i~~fl~  232 (353)
T TIGR01263       155 GLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASP--DGKVKIPLNEPASGKDKSQIEEFLE  232 (353)
T ss_pred             CeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECC--CCcEEEEEeccCCCCCCCHHHHHHH
Confidence            3678999999999  9999999999999999877654322  11111222211  2235666665311   11      1


Q ss_pred             CcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCC
Q 022769          178 YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP  212 (292)
Q Consensus       178 ~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p  212 (292)
                      ...|.|++||||.|+|+++++++|+++|+++...|
T Consensus       233 ~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P  267 (353)
T TIGR01263       233 FYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTP  267 (353)
T ss_pred             HcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCC
Confidence            12367999999999999999999999999987665

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=98.90  E-value=1e-07  Score=74.92  Aligned_cols=110  Identities=13%  Similarity=0.213  Sum_probs=72.4

Q ss_pred             EEEc-CCHHHHHHHHHHhcCCEEEEEeeC----------CCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEE
Q 022769          119 VYRV-GDLDKTIKFYTECLGMKLLRKRDI----------PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  187 (292)
Q Consensus       119 ~L~V-~Dle~a~~FY~~vLG~~~~~~~~~----------~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hi  187 (292)
                      .|.+ .|.++|++||+++||+++......          ..+.+..+.+..++.    .+.+...........+ +-.++
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~----~l~~~d~~~~~~~~~~-~~~~l   78 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQ----RLMASDGGPGFPFTFG-NGISL   78 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCE----EEEEEcCCCCCCCCCC-CCEEE
Confidence            4667 899999999999999999876532          123334455554432    3333332221111122 33468


Q ss_pred             EEeeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEE
Q 022769          188 GIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  235 (292)
Q Consensus       188 a~~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel  235 (292)
                      ++.|+|   +++++++|.+.| ++..++...++| .+..+++||+|+.|+|
T Consensus        79 ~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g-~~~~~v~Dp~G~~W~i  127 (128)
T cd06588          79 SVECDSEEEADRLFEALSEGG-TVLMPLQKTFWS-PLFGWVTDRFGVSWQI  127 (128)
T ss_pred             EEECCCHHHHHHHHHHHhcCC-eEeccchhcCcc-cccEEEECCCCCEEEe
Confidence            888886   777888987766 777777766654 4567899999999987

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.87  E-value=5.2e-08  Score=80.92  Aligned_cols=147  Identities=22%  Similarity=0.308  Sum_probs=83.0

Q ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCC---C---CCC------cCCC
Q 022769          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG---V---DKY------DIGT  182 (292)
Q Consensus       115 i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~---~---~~~------~~g~  182 (292)
                      |+|+++.|+|++++.++|++.|||.+......+........+.++..    .||+....+   .   ..+      ..+.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~----YlEli~i~~~~~~~~~~~~~~~~~~~~~~   76 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDG----YLELIAIDPEAPAPDRGRWFGLDRLAGGE   76 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSS----EEEEEEES-HHHSTGGGT-TTTHHHHT--
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCc----eEEEEEeCCcccccccccceechhhcCCC
Confidence            78999999999999999988899999988777764555555555432    555554221   1   111      1357


Q ss_pred             ceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCC--CeEEEEEECC----CCCEEEEEEcCC-C---------CCCce
Q 022769          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGG--NTVIAFIEDP----DGYKFELLERGP-T---------PEPLC  246 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g--~~~~~y~~DP----dG~~iel~e~~~-~---------~~~l~  246 (292)
                      |+.++++.++|+++..+++++.|+... .....+++  ....+++.++    .+..=.+++... .         ..+|.
T Consensus        77 g~~~~~l~t~d~~~~~~~l~~~G~~~~-~r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~~~~~~~~~h~ng~~~i~  155 (175)
T PF13468_consen   77 GLYGWALRTDDIEAVAARLRAAGLDAG-SRVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWETPHPEWARHPNGALGIT  155 (175)
T ss_dssp             EEEEEEEE-S-HHHHHHHHHTTT-EEE-EEEEEEE-EEEEEEEEEE-SS---SS---EEEEESS-CCHHTTT--TTEEEE
T ss_pred             CeEEEEEecCCHHHHHHHHHhcCCCCC-CcCcCCCCcceEEEEEeCCcccccCCCCcEEEEeCCCCcccccCCCccceEE
Confidence            999999999999999999999997521 11111111  1234455553    234555553322 1         12789


Q ss_pred             eeeeecCCHHHHHHHHHHhc
Q 022769          247 QVMLRVGDLDRAINFYKKAF  266 (292)
Q Consensus       247 hv~l~v~D~~~s~~fY~~~l  266 (292)
                      +|.+.+.|++++.++|.++|
T Consensus       156 ~v~i~~~d~~~~~~~~~~l~  175 (175)
T PF13468_consen  156 RVVIAVPDPDAAAARYARLL  175 (175)
T ss_dssp             EEEEEETTHHHHHHHHHHH-
T ss_pred             EEEEEeCCHHHHHHHHHhhC
Confidence            99999999999999999865

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.86  E-value=2.1e-07  Score=73.47  Aligned_cols=117  Identities=21%  Similarity=0.225  Sum_probs=84.5

Q ss_pred             EEEcC-CHHHHHHHHHHhcCCEEEEEeeCCC----------CceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCc-eEE
Q 022769          119 VYRVG-DLDKTIKFYTECLGMKLLRKRDIPE----------DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG-FGH  186 (292)
Q Consensus       119 ~L~V~-Dle~a~~FY~~vLG~~~~~~~~~~~----------~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g-~~h  186 (292)
                      -|... |-++|++||+++||.++.......+          +....+.+..++.    .+.+....+......+.+ -.-
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~----~im~sd~~~~~~~~~~~~~s~~   80 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGS----TIMLSDAFPDMGATEGGGTSLS   80 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCE----EEEEecCCCccCcccCCCeeEE
Confidence            36677 9999999999999999988766555          4666666666532    333333322222222222 234


Q ss_pred             EEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC
Q 022769          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       187 ia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                      |.+.++|++++++++.+.|+++..++....+|. +...++||.|+.|.|.+...
T Consensus        81 l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~-r~G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          81 LDLYVEDVDAVFERAAAAGATVVMPLEDTFWGD-RYGQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             EEEEehHHHHHHHHHHhcCCeEEecchhcCccc-ceEEEECCCCCEEEEecCcc
Confidence            677888999999999999999998888887754 45779999999999986543

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.72  E-value=8.8e-08  Score=88.72  Aligned_cols=126  Identities=17%  Similarity=0.219  Sum_probs=85.2

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCC-----ceEEEEEeeCCCCceEEEEEEecCCC----C------
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-----RYTNAFLGYGPEDSHFVVELTYNYGV----D------  176 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-----~~~~~~l~~g~~~~~~~l~l~~~~~~----~------  176 (292)
                      ..+|+||++.|.+++.+..||+++|||+..+....++.     ......+..+.  ..+.+++..+...    .      
T Consensus       178 l~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~--g~v~ipLnEP~~~~~~~SqI~eFL  255 (398)
T PLN02875        178 LRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNN--EMVLLPLNEPTFGTKRKSQIQTYL  255 (398)
T ss_pred             cceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCC--CcEEEEeccCCCCCCCcChHHHHH
Confidence            56899999999999999999999999998765433221     12344444332  2356666664321    1      


Q ss_pred             CCcCCCceEEEEEeeCCHHHHHHHHHHc----CCeeecCCe---------ecC----C------CCeEEEEEECCCCCEE
Q 022769          177 KYDIGTGFGHFGIAVEDVAKTVDLVKAK----GGKVTREPG---------PVK----G------GNTVIAFIEDPDGYKF  233 (292)
Q Consensus       177 ~~~~g~g~~hia~~V~Dl~~~~~~L~~~----G~~i~~~p~---------~~~----~------g~~~~~y~~DPdG~~i  233 (292)
                      ....|.|++||||.|+|+.++.++|+++    |++....|.         +.+    .      -....++=+|.+|.++
T Consensus       256 ~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~Pp~~YYd~L~~R~~~~l~~e~~~~L~~~~ILvD~d~~G~LL  335 (398)
T PLN02875        256 EHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPPPPTYYKNLKKRVGDVLTEEQIKECEELGILVDKDDQGVLL  335 (398)
T ss_pred             HhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCChHHHHHHHHHHhccCCChhhHHHHHHcCEEEecCCCceEE
Confidence            1124689999999999999999999999    999876441         111    0      0012345556677888


Q ss_pred             EEEEcC
Q 022769          234 ELLERG  239 (292)
Q Consensus       234 el~e~~  239 (292)
                      .+++.+
T Consensus       336 QIFTkp  341 (398)
T PLN02875        336 QIFTKP  341 (398)
T ss_pred             EEeccc
Confidence            887664

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.63  E-value=4.4e-07  Score=69.18  Aligned_cols=115  Identities=24%  Similarity=0.295  Sum_probs=71.1

Q ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCC-----CCCC--cCCCceEE
Q 022769          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG-----VDKY--DIGTGFGH  186 (292)
Q Consensus       114 ~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~-----~~~~--~~g~g~~h  186 (292)
                      ++--|.|.|+|++++.+||+. |||+.-.+.....   ....+ .+..   +.+.|.....     ..+.  .....-.-
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~---a~~mi-~~~n---i~vMLL~~~~fq~F~~~~i~dt~~s~evl   74 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED---AACMI-ISDN---IFVMLLEEARFQTFTKRQIADTTKSREVL   74 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCccccc---ceeEE-Eecc---EEEEEeccHHhhhhcccccccccCCceEE
Confidence            455677999999999999996 9999855433221   11222 1221   2222222110     0000  01112234


Q ss_pred             EEEeeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          187 FGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       187 ia~~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      +++.+.+   ++++.++..+.|++...++...  |..+..-+.||||+.||+.--
T Consensus        75 i~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~--gfMYg~~fqDpDGh~wE~l~m  127 (133)
T COG3607          75 ISLSAGSREEVDELVDKALEAGGKPANEPQDE--GFMYGRSFQDPDGHVWEFLWM  127 (133)
T ss_pred             EEeccCcHHHHHHHHHHHHHcCCCCCCCcccc--ccccceeeeCCCCCeEEEEEe
Confidence            6777764   8899999999999986665554  445556789999999999854

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.59  E-value=3.2e-06  Score=64.20  Aligned_cols=113  Identities=25%  Similarity=0.340  Sum_probs=64.2

Q ss_pred             EEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHH
Q 022769          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVA  195 (292)
Q Consensus       116 ~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~  195 (292)
                      -+-+|.|.|-+..++||+++|||++..+..      ..++++.......+.|+-.+...........-++++.+.|++..
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~   75 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPK   75 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHH
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHH
Confidence            356799999999999999999999988754      24666554444555566554332222223347899999999876


Q ss_pred             HHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          196 KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       196 ~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      ++ +.|.++|..+.   ....+..++.+-..+|.|.+|.+...
T Consensus        76 EI-e~LLar~~~~~---~l~kg~~gyAfe~vSPEgd~~llhaE  114 (125)
T PF14506_consen   76 EI-EALLARGAQYD---RLYKGKNGYAFEAVSPEGDRFLLHAE  114 (125)
T ss_dssp             HH-HHHHHC-S--S---EEEE-SSSEEEEEE-TT--EEEEE--
T ss_pred             HH-HHHHhcccccc---eeEEcCCceEEEEECCCCCEEEEEEc
Confidence            63 44455555432   22223344567778999999999854

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.36  E-value=4.6e-06  Score=74.61  Aligned_cols=157  Identities=17%  Similarity=0.200  Sum_probs=99.1

Q ss_pred             ccceEEEEEEcCCH-HHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCC----CCcCCCceEE
Q 022769          112 KRRMLHVVYRVGDL-DKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD----KYDIGTGFGH  186 (292)
Q Consensus       112 i~~i~Hv~L~V~Dl-e~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~----~~~~g~g~~h  186 (292)
                      -+++.+|.+.|.|. ++..+++ ..|||....+-...  . ..+| +.|    .+.+.+.......    ...+|+++..
T Consensus        20 ~~GfeFvEf~~~d~~~~l~~l~-~~lGF~~~~~Hrsk--~-v~l~-rQG----dinlvvn~~~~s~a~~f~~~Hgps~~a   90 (363)
T COG3185          20 TDGFEFVEFAVPDPQEALGALL-GQLGFTAVAKHRSK--A-VTLY-RQG----DINLVVNAEPDSFAAEFLDKHGPSACA   90 (363)
T ss_pred             CCceeEEEEecCCHHHHHHHHH-HHhCcccccccccc--c-eeEE-EeC----CEEEEEcCCCcchhhHHHHhcCCchhe
Confidence            45899999999999 5555555 46999887653221  1 1122 112    2334333322110    1126778889


Q ss_pred             EEEeeCCHHHHHHHHHHcCCeeecCCe---e--cC---CCCeEEEEEECCCCC--E--EEEEEcC--C--C---CCCcee
Q 022769          187 FGIAVEDVAKTVDLVKAKGGKVTREPG---P--VK---GGNTVIAFIEDPDGY--K--FELLERG--P--T---PEPLCQ  247 (292)
Q Consensus       187 ia~~V~Dl~~~~~~L~~~G~~i~~~p~---~--~~---~g~~~~~y~~DPdG~--~--iel~e~~--~--~---~~~l~h  247 (292)
                      ++|.|+|...++++.++.|.+....+.   .  ++   +-+...+||.|..|.  .  .++...+  +  .   ...|+|
T Consensus        91 ~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~~~siyd~~f~~~~~~~~~~~~g~~~IDH  170 (363)
T COG3185          91 MAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYGGRSIYDVEFEPNGAQGASGGVGLTAIDH  170 (363)
T ss_pred             eEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCCCCcccccccccccccccccccCceeech
Confidence            999999999999999999985322211   1  11   112346788888731  1  1121111  1  1   127999


Q ss_pred             eeeec--CCHHHHHHHHHHhcCCEEEeeecCC
Q 022769          248 VMLRV--GDLDRAINFYKKAFGMELLRKRDNP  277 (292)
Q Consensus       248 v~l~v--~D~~~s~~fY~~~lG~~~~~~~~~~  277 (292)
                      +++++  ..++....||+++|||+..+..+-+
T Consensus       171 l~~nv~~~~md~w~~FY~~if~~~~~~~fdi~  202 (363)
T COG3185         171 LTHNVKAGQMDTWVLFYESLFGFREIQYFDIP  202 (363)
T ss_pred             hhhhcchhhHHHHHHHHHHHhCccceeeEecc
Confidence            98877  5999999999999999999877654

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.34  E-value=4.2e-06  Score=75.36  Aligned_cols=105  Identities=19%  Similarity=0.291  Sum_probs=68.0

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~  192 (292)
                      -++-||+|.|+|++++++||+++||+.. ...+    .  .+-+  +  ..-+.+-+... ..    ....-.-+++.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fsde----~--a~cm--~--dtI~vMllt~~-D~----~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC-WDGD----K--LFLL--G--KTSLYLQQTKA-EK----KNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC-CCCC----c--cccc--c--CcEEEEEecCC-CC----CCcceEEEEeccC
Confidence            4778999999999999999999988874 2211    1  1111  1  11122222222 11    1112334778887


Q ss_pred             C---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          193 D---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       193 D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      +   ++++.++..++|++...++.++  |.  .--|.||||+.||++-
T Consensus       310 Sre~VD~lv~~A~aaGG~~~~~~~D~--Gf--~rsf~D~DGH~WEi~~  353 (357)
T PRK01037        310 CEHDFVRFLRRWEMLGGELGEQADGH--FP--LRLVFDLDGHIWVVSC  353 (357)
T ss_pred             CHHHHHHHHHHHHHcCCCCCCCcccc--cC--cceeECCCCCEEEEEE
Confidence            5   8889999999999765554444  33  2347999999999974

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.23  E-value=2.6e-06  Score=66.95  Aligned_cols=45  Identities=22%  Similarity=0.498  Sum_probs=37.9

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCC-----------CcEEEEEcCC
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-----------YKVNSYLLPP  288 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~-----------~~~~~~~~~~  288 (292)
                      ++.|++++|+|+++|++||+++|||++.++.++++           ++|...++++
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~   57 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGY   57 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEec
Confidence            67899999999999999999999999988777776           5666666643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=98.17  E-value=1.8e-05  Score=60.27  Aligned_cols=88  Identities=23%  Similarity=0.266  Sum_probs=68.4

Q ss_pred             EEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCC-CEEEEEEcCCCC-------CCceeeeeecCCH
Q 022769          185 GHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDG-YKFELLERGPTP-------EPLCQVMLRVGDL  255 (292)
Q Consensus       185 ~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG-~~iel~e~~~~~-------~~l~hv~l~v~D~  255 (292)
                      +|++|.|+|++++.+.+.+ .|+..... ...+.......++..++| ..|||++.....       ..+.|+++.|.|+
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~-~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D~   79 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWER-YRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSPLDRGGGGIHHIAFEVDDL   79 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEE-EEEGCTTEEEEEEEETTETEEEEEEEESSTTCHHHHTSSEEEEEEEEESHH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEE-EecCCCCEEEEEEEeCCCcEEEEEEEeCCCCcccccCCCCEEEEEEEeCCH
Confidence            5999999999999999998 88875433 233333445566778887 789999876442       4799999999999


Q ss_pred             HHHHHHHHHhcCCEEEeee
Q 022769          256 DRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       256 ~~s~~fY~~~lG~~~~~~~  274 (292)
                      +++.+-+.+ .|+++....
T Consensus        80 d~~~~~l~~-~G~~~~~~~   97 (109)
T PF13669_consen   80 DAAIARLEA-QGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHHH-TTECEEECE
T ss_pred             HHHHHHHHH-CCCEEcccC
Confidence            999999976 799998754

>PLN02367 lactoylglutathione lyase

Probab=98.11  E-value=6e-06  Score=71.03  Aligned_cols=46  Identities=30%  Similarity=0.613  Sum_probs=42.8

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCCC
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPN  289 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~  289 (292)
                      .+.|++|+|.|++++++||+++|||++.++.++++.+++++|++++
T Consensus        75 ~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~  120 (233)
T PLN02367         75 IMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYE  120 (233)
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecC
Confidence            6899999999999999999999999999988899999999999753

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.10  E-value=8.8e-06  Score=72.80  Aligned_cols=98  Identities=20%  Similarity=0.305  Sum_probs=69.7

Q ss_pred             ccceEEEEEEcC--CHHHHHHHHHHhcCCEEEEEeeCCCC---ceEEEEEeeCCCCceEEEEEEecCCCCC-------Cc
Q 022769          112 KRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPED---RYTNAFLGYGPEDSHFVVELTYNYGVDK-------YD  179 (292)
Q Consensus       112 i~~i~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~---~~~~~~l~~g~~~~~~~l~l~~~~~~~~-------~~  179 (292)
                      ...|+|+++.|.  .++.+..||+++|||+.....+.++.   -...++.+   ..+.+.|.+........       ..
T Consensus       165 ~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~S---p~G~vrlplN~s~~~~sqi~efl~~y  241 (363)
T COG3185         165 LTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVS---PCGKVRLPLNESADDKSQIGEFLREY  241 (363)
T ss_pred             ceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEec---CCCcEEeecccCCCchhHHHHHHHHh
Confidence            468999998875  79999999999999999877655432   12222222   12234555544332222       12


Q ss_pred             CCCceEEEEEeeCCHHHHHHHHHHcCCeeecCC
Q 022769          180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP  212 (292)
Q Consensus       180 ~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p  212 (292)
                      .|.|+.||||.++|+-++.++|+++|++....|
T Consensus       242 ~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip  274 (363)
T COG3185         242 RGEGIQHIAFGTDDIYATVAALRERGVKFLPIP  274 (363)
T ss_pred             CCCcceEEEecccHHHHHHHHHHHcCCccCCCc
Confidence            678999999999999999999999999876543

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.05  E-value=6.3e-05  Score=59.75  Aligned_cols=119  Identities=18%  Similarity=0.214  Sum_probs=75.7

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCC----CcCCCceEEE
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK----YDIGTGFGHF  187 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~----~~~g~g~~hi  187 (292)
                      ..+++||.+.+.+.+++..+++ .|||+.+.+-...  . ..+| +.|  .  +.+.+...+....    ..+|+++.-+
T Consensus         7 ~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk--~-v~l~-rQG--~--I~~vln~ep~s~a~~~~~~HG~sv~ai   77 (139)
T PF14696_consen    7 LDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSK--D-VTLY-RQG--D--INFVLNSEPDSFAAEFAAQHGPSVCAI   77 (139)
T ss_dssp             EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCC--S-EEEE-EET--T--EEEEEEEESTSCHHHHHHHHSSEEEEE
T ss_pred             CCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCCc--c-eEEE-EeC--C--EEEEEeCCCcchHHHHHHhcCCEEEEE
Confidence            4689999999999888888886 5999998764322  1 1222 323  2  3444443222111    1257899999


Q ss_pred             EEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC
Q 022769          188 GIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       188 a~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                      +|+|+|.++++++..+.|.+...++..  .+....--++.++|.++.|+++...
T Consensus        78 afrV~Da~~A~~rA~~~GA~~~~~~~~--~~e~~~paI~g~G~sl~yfVdr~~~  129 (139)
T PF14696_consen   78 AFRVDDAAAAYERAVALGAEPVQEPTG--PGELNIPAIRGIGGSLHYFVDRYGD  129 (139)
T ss_dssp             EEEES-HHHHHHHHHHTT--EEEEEEE--TT-BEEEEEE-CCC-EEEEEE--SS
T ss_pred             EEEeCCHHHHHHHHHHcCCcCcccCCC--CCcEeeeeEEccCCCEEEEEecCCC
Confidence            999999999999999999987654322  2344556688999999999987544

>PRK10148 hypothetical protein; Provisional

Probab=98.03  E-value=0.00055  Score=55.16  Aligned_cols=116  Identities=16%  Similarity=0.138  Sum_probs=73.4

Q ss_pred             EEEcC-CHHHHHHHHHHhcCCEEEEEee---C-----------------CCCceEEEEEeeCCCCceEEEEEEecCCCCC
Q 022769          119 VYRVG-DLDKTIKFYTECLGMKLLRKRD---I-----------------PEDRYTNAFLGYGPEDSHFVVELTYNYGVDK  177 (292)
Q Consensus       119 ~L~V~-Dle~a~~FY~~vLG~~~~~~~~---~-----------------~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~  177 (292)
                      .|... |.++|++||+++||.++.....   .                 +++....+.+..++.    .+.+....... 
T Consensus         6 yL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~----~lm~sD~~~~~-   80 (147)
T PRK10148          6 YLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGS----DIMMSDAIPSG-   80 (147)
T ss_pred             EEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCE----EEEEECCCCCc-
Confidence            45564 8999999999999988764421   0                 123445566665532    23332221111 


Q ss_pred             CcCCCceEEEEEeeCCHHH---HHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCCC
Q 022769          178 YDIGTGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  242 (292)
Q Consensus       178 ~~~g~g~~hia~~V~Dl~~---~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~~  242 (292)
                      ...+. -.++.+.++|.++   ++++| +.|+++..++....++. +...++||.|+.|.|......|
T Consensus        81 ~~~~~-~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~-~~g~v~D~fGi~W~l~~~~~~~  145 (147)
T PRK10148         81 KAHYS-GFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAH-GFGKVTDKFGVPWMINVVKQQP  145 (147)
T ss_pred             CCCCC-eEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhh-ccEEEECCCCCEEEEEecCCCC
Confidence            11122 2357778888665   56666 58888888877776644 4578999999999998765443

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=98.01  E-value=1.1e-05  Score=67.53  Aligned_cols=46  Identities=33%  Similarity=0.636  Sum_probs=41.8

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCCC
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPN  289 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~  289 (292)
                      ++.|++|.|.|+++|++||+++|||++..+.+.++..++++|++++
T Consensus        27 ~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~   72 (185)
T PLN03042         27 IMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE   72 (185)
T ss_pred             EEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecC
Confidence            7999999999999999999999999999887788888999998653

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=97.89  E-value=3.4e-05  Score=62.13  Aligned_cols=50  Identities=44%  Similarity=0.748  Sum_probs=40.7

Q ss_pred             CCCCCceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCCC
Q 022769          240 PTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPN  289 (292)
Q Consensus       240 ~~~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~  289 (292)
                      ....+++|+.|.|.|++++.+||+++|||++..+.+.++.++..++++.+
T Consensus        13 ~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~   62 (150)
T TIGR00068        13 TKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYG   62 (150)
T ss_pred             cCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCC
Confidence            34568999999999999999999999999998766666666666666543

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=97.74  E-value=8.8e-05  Score=59.38  Aligned_cols=47  Identities=17%  Similarity=0.243  Sum_probs=35.7

Q ss_pred             CCCceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCc-EEEEEcCC
Q 022769          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK-VNSYLLPP  288 (292)
Q Consensus       242 ~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~-~~~~~~~~  288 (292)
                      ..+++|++|.|+|++++.+||+++|||++.++...++.. ....|++.
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~   51 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSC   51 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEec
Confidence            457999999999999999999999999988765443332 23445443

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.73  E-value=5.8e-05  Score=57.97  Aligned_cols=44  Identities=32%  Similarity=0.474  Sum_probs=33.3

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcC
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLP  287 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~  287 (292)
                      +++|+.|.|.|++++++||+++|||++......+...+..+|+.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~   44 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLS   44 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEe
Confidence            47899999999999999999999999875543333334444443

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.71  E-value=0.0011  Score=52.33  Aligned_cols=90  Identities=27%  Similarity=0.417  Sum_probs=64.8

Q ss_pred             ceEEEEEeeCCHHHHHHHHHHcCCeeecCCeec----------CCCCeEEEEEECCCC-CEEEEEEcC-C----------
Q 022769          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPV----------KGGNTVIAFIEDPDG-YKFELLERG-P----------  240 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~----------~~g~~~~~y~~DPdG-~~iel~e~~-~----------  240 (292)
                      +++|+++.|.|++++.+...+.|.++.......          ..+.....++..|+| ..+|+.+.. +          
T Consensus         3 ~i~Hi~i~v~Dl~~s~~FY~~LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~~~~   82 (142)
T cd08353           3 RMDNVGIVVRDLEAAIAFFLELGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHRPAP   82 (142)
T ss_pred             eeeeEEEEeCCHHHHHHHHHHcCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCCCCC
Confidence            689999999999999998888998765332110          112234455666655 679998732 1          


Q ss_pred             -CCCCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          241 -TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       241 -~~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                       ....+.|+++.|.|++++.+...+ .|.++...
T Consensus        83 ~~~~g~~hia~~v~d~d~~~~~l~~-~G~~~~~~  115 (142)
T cd08353          83 VNALGLRRVMFAVDDIDARVARLRK-HGAELVGE  115 (142)
T ss_pred             CCCCCceEEEEEeCCHHHHHHHHHH-CCCceeCC
Confidence             012578999999999999999975 79998863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=97.65  E-value=0.00011  Score=56.34  Aligned_cols=46  Identities=28%  Similarity=0.514  Sum_probs=35.5

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeec--CCCCcEEEEEcCCC
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRD--NPDYKVNSYLLPPN  289 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~--~~~~~~~~~~~~~~  289 (292)
                      +|+||++.|.|++++++||+++|||++.....  .........++..+
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~   48 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIG   48 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEEST
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccc
Confidence            48999999999999999999999999998765  22333444444443

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=97.57  E-value=0.00017  Score=55.13  Aligned_cols=45  Identities=38%  Similarity=0.695  Sum_probs=36.4

Q ss_pred             ceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCCC
Q 022769          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPN  289 (292)
Q Consensus       245 l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~  289 (292)
                      +.|+.+.|+|++++.+||+++|||++....+.++..+..+++..+
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~   45 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYP   45 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCC
Confidence            579999999999999999999999998765555545666666653

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=97.56  E-value=8.7e-05  Score=57.36  Aligned_cols=45  Identities=20%  Similarity=0.367  Sum_probs=35.0

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCC
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPP  288 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~  288 (292)
                      +++|+.+.|.|++++.+||+++|||++......++..+..+++..
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~   45 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIAL   45 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEec
Confidence            578999999999999999999999999865434444445555543

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=97.55  E-value=0.0025  Score=48.85  Aligned_cols=104  Identities=24%  Similarity=0.292  Sum_probs=71.2

Q ss_pred             eEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC-----------CCCceeeeee
Q 022769          184 FGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----------PEPLCQVMLR  251 (292)
Q Consensus       184 ~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~-----------~~~l~hv~l~  251 (292)
                      +.|+++.|+|++++.+.+.+ .|..........+.+.....++.. +|..+++.+....           ...+.|+.+.
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~   79 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGL-GNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFE   79 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEc-CCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEE
Confidence            46999999999999998876 788775432211122233444544 6788888865321           2357899999


Q ss_pred             cCCHHHHHHHHHHhcCCEEEeeec-CCCCcEEEEEcCCC
Q 022769          252 VGDLDRAINFYKKAFGMELLRKRD-NPDYKVNSYLLPPN  289 (292)
Q Consensus       252 v~D~~~s~~fY~~~lG~~~~~~~~-~~~~~~~~~~~~~~  289 (292)
                      |.|++++.+...+ .|.++..... .....+.+.|+.+.
T Consensus        80 v~d~~~~~~~l~~-~G~~~~~~~~~~~~~g~~~~~~d~~  117 (128)
T cd07249          80 VDDIDAALARLKA-QGVRLLQEGPRIGAGGKRVAFLHPK  117 (128)
T ss_pred             eCCHHHHHHHHHH-CCCeeeccCCCccCCCCEEEEEecC
Confidence            9999999999965 7999877543 34445566666554

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PRK10291 glyoxalase I; Provisional

Probab=97.46  E-value=0.00026  Score=55.25  Aligned_cols=41  Identities=49%  Similarity=0.893  Sum_probs=34.4

Q ss_pred             eeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCCC
Q 022769          249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPN  289 (292)
Q Consensus       249 ~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~  289 (292)
                      +|.|.|++++++||+++|||++......++..+..+|+..+
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~   41 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYG   41 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccC
Confidence            47899999999999999999998766677777778777654

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.36  E-value=0.0081  Score=45.65  Aligned_cols=89  Identities=24%  Similarity=0.247  Sum_probs=62.7

Q ss_pred             ceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC--------CCCCceeeeeecC
Q 022769          183 GFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP--------TPEPLCQVMLRVG  253 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~--------~~~~l~hv~l~v~  253 (292)
                      +++|+++.|+|++++.+.+++ .|+.+..... .+.+....+.+..+++..++++....        ....+.|+.+.|.
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~-~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~h~~~~v~   81 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVY-RPERGSYKLDLLLNGGYQLELFSFPNPPERPSYPEACGLRHLAFSVE   81 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeee-cCCCCcEEEEEecCCCcEEEEEEcCCCCCCCCCCcCCCceEEEEEeC
Confidence            788999999999999998874 8988754321 11112222334456777888875432        1236789999999


Q ss_pred             CHHHHHHHHHHhcCCEEEee
Q 022769          254 DLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       254 D~~~s~~fY~~~lG~~~~~~  273 (292)
                      |++++.+...+ .|.++...
T Consensus        82 d~~~~~~~l~~-~G~~~~~~  100 (125)
T cd08352          82 DIEAAVKHLKA-KGVEVEPI  100 (125)
T ss_pred             CHHHHHHHHHH-cCCccccc
Confidence            99999988865 79887764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=97.29  E-value=0.00053  Score=55.53  Aligned_cols=34  Identities=29%  Similarity=0.440  Sum_probs=30.5

Q ss_pred             CCCCceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          241 TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       241 ~~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      .+.+|+|+.|.|.|++++.+||+++|||++.++.
T Consensus         6 ~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~   39 (154)
T cd07237           6 GDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEI   39 (154)
T ss_pred             CCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEE
Confidence            3568999999999999999999999999987753

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=97.20  E-value=0.00034  Score=53.84  Aligned_cols=30  Identities=20%  Similarity=0.292  Sum_probs=28.0

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      +|+||+|.|+|+++|.+||+++|||++..+
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~   31 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDR   31 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccC
Confidence            689999999999999999999999998764

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=97.20  E-value=0.00047  Score=54.24  Aligned_cols=33  Identities=30%  Similarity=0.534  Sum_probs=30.0

Q ss_pred             CCCceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       242 ~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      |.+++|+.|.|.|++++.+||+++|||++.+..
T Consensus         1 ~~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~   33 (134)
T cd08360           1 PRRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRF   33 (134)
T ss_pred             CceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEe
Confidence            457999999999999999999999999998754

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=97.15  E-value=0.014  Score=44.48  Aligned_cols=102  Identities=18%  Similarity=0.213  Sum_probs=63.6

Q ss_pred             ceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECC---CCCEEEEEEcCCC-------CCCceeeeee
Q 022769          183 GFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDP---DGYKFELLERGPT-------PEPLCQVMLR  251 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DP---dG~~iel~e~~~~-------~~~l~hv~l~  251 (292)
                      |++|+++.|+|++++.+.+++ .|++................++.+.   .|..+++++....       ...+.|+.+.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            578999999999999998876 6987653321111111233455554   6778888865321       2357899999


Q ss_pred             cCCH---HHHHHHHHHhcCCEEEeeecCCCCcEEEEEc
Q 022769          252 VGDL---DRAINFYKKAFGMELLRKRDNPDYKVNSYLL  286 (292)
Q Consensus       252 v~D~---~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~  286 (292)
                      +.|.   ++..+-..+ .|.++.+.... ...+.++|.
T Consensus        81 v~~~~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~  116 (126)
T cd08346          81 VPSEASLDAWRERLRA-AGVPVSGVVDH-FGERSIYFE  116 (126)
T ss_pred             cCCHHHHHHHHHHHHH-cCCcccceEee-cceEEEEEE
Confidence            9854   666666654 68877653222 333444443

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=97.13  E-value=0.00048  Score=53.02  Aligned_cols=31  Identities=32%  Similarity=0.525  Sum_probs=28.7

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .+++|+.|.|+|++++.+||+++|||++...
T Consensus         3 ~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~   33 (122)
T cd07265           3 LRPGHVQLRVLDLEEAIKHYREVLGLDEVGR   33 (122)
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhccCCEeeee
Confidence            4789999999999999999999999998765

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=97.08  E-value=0.0011  Score=51.84  Aligned_cols=41  Identities=22%  Similarity=0.384  Sum_probs=31.5

Q ss_pred             eeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcC
Q 022769          246 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLP  287 (292)
Q Consensus       246 ~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~  287 (292)
                      +||.|.|+|++++.+||+++|||++......+ ......|+.
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~   41 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLR   41 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEE
Confidence            58999999999999999999999998765433 323344443

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.03  E-value=0.00037  Score=61.58  Aligned_cols=126  Identities=19%  Similarity=0.372  Sum_probs=82.3

Q ss_pred             ccceEEEEEEcC--CHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEe-----eCCCCceEEEEEEecCCCCC-------
Q 022769          112 KRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLG-----YGPEDSHFVVELTYNYGVDK-------  177 (292)
Q Consensus       112 i~~i~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~-----~g~~~~~~~l~l~~~~~~~~-------  177 (292)
                      +.+|+|++..++  .++.+.+||.+.|||.-.+..+.+.  ....+.+     .......+.+.+..+.+..+       
T Consensus       176 ~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~--v~te~SaLrs~vlan~~esi~mpinEp~~G~k~ksQIqe  253 (381)
T KOG0638|consen  176 LNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQ--VHTEYSALRSIVLANYEESIKMPINEPAPGKKKKSQIQE  253 (381)
T ss_pred             eeehhhhhccCCcccchHHHHHHHHhhcccccccCCcch--hhhHHHHHHHHHHhcCCccEEEeccCCCCCCccHHHHHH
Confidence            459999999999  6899999999999998877654322  1111110     11223334444444322221       


Q ss_pred             ---CcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCC------C--------------CeEEEEEECCCCCEEE
Q 022769          178 ---YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG------G--------------NTVIAFIEDPDGYKFE  234 (292)
Q Consensus       178 ---~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~------g--------------~~~~~y~~DPdG~~ie  234 (292)
                         +..|.|+.||++.++|+-.+.+.|+++|+.....|...-.      .              ....+.=.|-+|+++.
T Consensus       254 yv~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~el~ILvD~De~gyLLQ  333 (381)
T KOG0638|consen  254 YVEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLEELGILVDFDENGYLLQ  333 (381)
T ss_pred             HHHhcCCCceeeeeecchHHHHHHHHHHhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHHHcCeEEecCCCcEEee
Confidence               2357899999999999999999999999988765432100      0              0122334477899999


Q ss_pred             EEEcC
Q 022769          235 LLERG  239 (292)
Q Consensus       235 l~e~~  239 (292)
                      |++.+
T Consensus       334 IFTKp  338 (381)
T KOG0638|consen  334 IFTKP  338 (381)
T ss_pred             eeccc
Confidence            99764

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=97.03  E-value=0.00072  Score=51.97  Aligned_cols=31  Identities=19%  Similarity=0.358  Sum_probs=29.0

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .+++|+.|.|+|++++.+||+++|||++.++
T Consensus         5 ~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~   35 (121)
T cd09013           5 AHLAHVELLTPKPEESLWFFTDVLGLEETGR   35 (121)
T ss_pred             cEeeEEEEEeCCHHHHHHHHHhCcCCEEEee
Confidence            4789999999999999999999999999875

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=97.02  E-value=0.028  Score=44.13  Aligned_cols=98  Identities=13%  Similarity=0.127  Sum_probs=64.8

Q ss_pred             eEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC-----------CCCCceeeeee
Q 022769          184 FGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-----------TPEPLCQVMLR  251 (292)
Q Consensus       184 ~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~-----------~~~~l~hv~l~  251 (292)
                      ++|+.+.|+|+++..+.+++ .|+++....   .........+. .++..+++.+...           ....+.|+.+.
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~---~~~~~~~~~~~-~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~   76 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYH---GSEDKASYLLR-QGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFR   76 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEec---CCCceEEEEEE-cCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEE
Confidence            47999999999999998888 899875431   11112233343 3456677765332           12357899999


Q ss_pred             cCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEc
Q 022769          252 VGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLL  286 (292)
Q Consensus       252 v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~  286 (292)
                      |.|++++.+-..+ .|.++.............+|.
T Consensus        77 V~Dvda~~~~l~~-~G~~v~~~p~~~~~~~~~~~i  110 (136)
T cd08342          77 VDDAAAAYERAVA-RGAKPVQEPVEEPGELKIAAI  110 (136)
T ss_pred             eCCHHHHHHHHHH-cCCeEccCceecCCeEEEEEE
Confidence            9999999999964 899998644332333344443

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=97.02  E-value=0.0013  Score=49.76  Aligned_cols=38  Identities=24%  Similarity=0.218  Sum_probs=30.6

Q ss_pred             ceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEE
Q 022769          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNS  283 (292)
Q Consensus       245 l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~  283 (292)
                      +.|+.|.|+|++++.+||+++||+++.+... ++..|..
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~~~   38 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDYAV   38 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCceEE
Confidence            4799999999999999999999999987643 2334443

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=97.01  E-value=0.022  Score=43.13  Aligned_cols=98  Identities=9%  Similarity=0.069  Sum_probs=64.8

Q ss_pred             ceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECC-CCCEEEEEEcCCCCCCceeeeeecCCHHHHHHH
Q 022769          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDP-DGYKFELLERGPTPEPLCQVMLRVGDLDRAINF  261 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DP-dG~~iel~e~~~~~~~l~hv~l~v~D~~~s~~f  261 (292)
                      ++.|+.+.|+|++++.+...+.|.+....    ..+   ..|++-. +...+.+... ....++.|+.+.|.|.++..+.
T Consensus         3 ~l~hv~l~v~Dl~~s~~FY~~lGl~~~~~----~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~af~v~~~~~~~~~   74 (113)
T cd07267           3 DIAHVRFEHPDLDKAERFLTDFGLEVAAR----TDD---ELYYRGYGTDPFVYVARK-GEKARFVGAAFEAASRADLEKA   74 (113)
T ss_pred             EEEEEEEccCCHHHHHHHHHHcCCEEEEe----cCC---eEEEecCCCccEEEEccc-CCcCcccEEEEEECCHHHHHHH
Confidence            67899999999999999888889876432    111   2455533 2333333332 2335789999999999988888


Q ss_pred             HHHhcCCEEEeeecCCCCcEEEEEcCCC
Q 022769          262 YKKAFGMELLRKRDNPDYKVNSYLLPPN  289 (292)
Q Consensus       262 Y~~~lG~~~~~~~~~~~~~~~~~~~~~~  289 (292)
                      . +.+|.+.......+...+.++|..++
T Consensus        75 ~-~~~g~~~~~~~~~~~~~~~~~~~DPd  101 (113)
T cd07267          75 A-ALPGASVIDDLEAPGGGKRVTLTDPD  101 (113)
T ss_pred             H-HcCCCeeecCCCCCCCceEEEEECCC
Confidence            6 46888776533334555666665543

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=96.98  E-value=0.00062  Score=52.85  Aligned_cols=31  Identities=23%  Similarity=0.401  Sum_probs=28.5

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .+|+|+.|.|+|++++.+||+++|||++.++
T Consensus         5 ~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~   35 (124)
T cd08361           5 QDIAYVRLGTRDLAGATRFATDILGLQVAER   35 (124)
T ss_pred             EEeeEEEEeeCCHHHHHHHHHhccCceeccC
Confidence            3689999999999999999999999998764

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=96.96  E-value=0.02  Score=42.33  Aligned_cols=99  Identities=20%  Similarity=0.227  Sum_probs=66.0

Q ss_pred             eEEEEEeeCCHHHHHHHHH-HcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC------CCCceeeeeecCCHH
Q 022769          184 FGHFGIAVEDVAKTVDLVK-AKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------PEPLCQVMLRVGDLD  256 (292)
Q Consensus       184 ~~hia~~V~Dl~~~~~~L~-~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~------~~~l~hv~l~v~D~~  256 (292)
                      ++|+++.|+|++++.+.+. ..|......+...    ....++..+++..+++......      ...+.|+.+.+.|++
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~----~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d~~   76 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL----FPGAWLYAGDGPQLHLIEEDPPDALPEGPGRDDHIAFRVDDLD   76 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC----CCceEEEeCCCcEEEEEecCCCccccCCCcccceEEEEeCCHH
Confidence            4799999999999988775 6687764332111    1123455555567888765432      346789999999999


Q ss_pred             HHHHHHHHhcCCEEEeeecCCCCcEEEEEcC
Q 022769          257 RAINFYKKAFGMELLRKRDNPDYKVNSYLLP  287 (292)
Q Consensus       257 ~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~  287 (292)
                      +..+-..+ .|.++..........+.+++..
T Consensus        77 ~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~D  106 (114)
T cd07245          77 AFRARLKA-AGVPYTESDVPGDGVRQLFVRD  106 (114)
T ss_pred             HHHHHHHH-cCCCcccccCCCCCccEEEEEC
Confidence            99999975 7999887533223334444443

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=96.95  E-value=0.0018  Score=50.57  Aligned_cols=46  Identities=26%  Similarity=0.363  Sum_probs=37.5

Q ss_pred             CCCceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcC
Q 022769          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLP  287 (292)
Q Consensus       242 ~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~  287 (292)
                      ...+.|..|.+.|++++.+||+++|||+..+..+..+.+|..+...
T Consensus         7 ~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y~~f~~~   52 (127)
T COG3324           7 KGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPAD   52 (127)
T ss_pred             CCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCceEEEEECC
Confidence            4578899999999999999999999999999755545667666443

>PRK11478 putative lyase; Provisional

Probab=96.93  E-value=0.032  Score=42.91  Aligned_cols=89  Identities=16%  Similarity=0.103  Sum_probs=59.3

Q ss_pred             ceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC--------CCCCceeeeeecC
Q 022769          183 GFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP--------TPEPLCQVMLRVG  253 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~--------~~~~l~hv~l~v~  253 (292)
                      +++|+++.|+|++++.+...+ .|.++..... .+........+.-.++..+++++...        ....+.|+.+.+.
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~g~~hi~f~v~   84 (129)
T PRK11478          6 QVHHIAIIATDYAVSKAFYCDILGFTLQSEVY-REARDSWKGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVD   84 (129)
T ss_pred             eecEEEEEcCCHHHHHHHHHHHhCCEeccccc-ccccccceeeEecCCCcEEEEEEecCCCCCCCCCCCCceeEEEEEeC
Confidence            678999999999999998865 6988753211 11101111122223467888876321        1235789999999


Q ss_pred             CHHHHHHHHHHhcCCEEEee
Q 022769          254 DLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       254 D~~~s~~fY~~~lG~~~~~~  273 (292)
                      |++++.+-..+ .|.++...
T Consensus        85 d~~~~~~~l~~-~G~~~~~~  103 (129)
T PRK11478         85 DIDAAVAHLES-HNVKCEAI  103 (129)
T ss_pred             CHHHHHHHHHH-cCCeeecc
Confidence            99999998865 89998653

>PRK06724 hypothetical protein; Provisional

Probab=96.91  E-value=0.002  Score=50.49  Aligned_cols=30  Identities=27%  Similarity=0.553  Sum_probs=26.0

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhc---CCEEEe
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAF---GMELLR  272 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~l---G~~~~~  272 (292)
                      ..++||.|.|+|+++|.+||+++|   ||+...
T Consensus         6 ~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~   38 (128)
T PRK06724          6 AGIHHIEFWVANLEESISFYDMLFSIIGWRKLN   38 (128)
T ss_pred             cccCEEEEEeCCHHHHHHHHHHHHhhCCcEEee
Confidence            469999999999999999999955   777753

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=96.91  E-value=0.012  Score=49.54  Aligned_cols=90  Identities=17%  Similarity=0.148  Sum_probs=66.4

Q ss_pred             ceEEEEEeeC--CHHHHHHHHHH-cCCeeecCCeec-CCCCeEEEEEECCCC-CEEEEEEcCC--C------------CC
Q 022769          183 GFGHFGIAVE--DVAKTVDLVKA-KGGKVTREPGPV-KGGNTVIAFIEDPDG-YKFELLERGP--T------------PE  243 (292)
Q Consensus       183 g~~hia~~V~--Dl~~~~~~L~~-~G~~i~~~p~~~-~~g~~~~~y~~DPdG-~~iel~e~~~--~------------~~  243 (292)
                      ++.|+++.|+  |++++.+..++ .|.+........ +.....+..+..|+| ..+++.+...  .            ..
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~G~   82 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYGGA   82 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhCCC
Confidence            6889999999  99999998865 788765431111 123445667777765 6788887544  1            24


Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      ++.|+++.|.|++++.+-.++ -|.+....
T Consensus        83 Gv~HIAf~vdDI~~~~~~L~~-~Gv~~l~~  111 (191)
T cd07250          83 GVQHIALATDDIFATVAALRA-RGVEFLPI  111 (191)
T ss_pred             ceeEEEEECCCHHHHHHHHHH-cCCeeccC
Confidence            788999999999999999975 79888754

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=96.87  E-value=0.032  Score=41.78  Aligned_cols=100  Identities=18%  Similarity=0.224  Sum_probs=67.3

Q ss_pred             EEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCC--CEEEEEEcCCC-------CCCceeeeeecCCH
Q 022769          186 HFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDG--YKFELLERGPT-------PEPLCQVMLRVGDL  255 (292)
Q Consensus       186 hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG--~~iel~e~~~~-------~~~l~hv~l~v~D~  255 (292)
                      |+++.|.|+++..+.+.+ .|+++......  .+....+.+.++++  ..+++......       .....|+.+.|.|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPM--GGGFRWVTVAPPGSPETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeecc--CCCcEEEEEeCCCCCeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            789999999999998876 89887643221  11233455666654  45666543322       34677999999999


Q ss_pred             HHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCC
Q 022769          256 DRAINFYKKAFGMELLRKRDNPDYKVNSYLLPP  288 (292)
Q Consensus       256 ~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~  288 (292)
                      +++.+...+ .|.++..........+..++..+
T Consensus        79 ~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~DP  110 (119)
T cd07263          79 DATYEELKA-RGVEFSEEPREMPYGTVAVFRDP  110 (119)
T ss_pred             HHHHHHHHh-CCCEEeeccccCCCceEEEEECC
Confidence            999999975 99998875533334455554433

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=96.86  E-value=0.0014  Score=50.41  Aligned_cols=30  Identities=30%  Similarity=0.633  Sum_probs=27.8

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      +++|+.|.|+|++++.+||+++|||++...
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~   30 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVR   30 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEe
Confidence            578999999999999999999999998764

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=96.84  E-value=0.0018  Score=50.59  Aligned_cols=31  Identities=29%  Similarity=0.620  Sum_probs=28.3

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      +++|+.+.|.|++++.+||+++|||++....
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~   31 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRG   31 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeec
Confidence            5899999999999999999999999987653

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=96.81  E-value=0.022  Score=46.40  Aligned_cols=88  Identities=20%  Similarity=0.212  Sum_probs=62.9

Q ss_pred             CceEEEEEeeCCHHHHHHHHHH-cCCeeecCCee-----------------cCCCCeEEEEEECCCCCEEEEEEcCCC--
Q 022769          182 TGFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGP-----------------VKGGNTVIAFIEDPDGYKFELLERGPT--  241 (292)
Q Consensus       182 ~g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~-----------------~~~g~~~~~y~~DPdG~~iel~e~~~~--  241 (292)
                      .+++|+++.|.|+++..+-.++ .|.++..++..                 ..+......++..++|..||+++....  
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~   82 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQEN   82 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCC
Confidence            3789999999999999998876 69876422110                 001113445666677888999986421  


Q ss_pred             --------CCCceeeeeecCCHHHHHHHHHHhcCCEE
Q 022769          242 --------PEPLCQVMLRVGDLDRAINFYKKAFGMEL  270 (292)
Q Consensus       242 --------~~~l~hv~l~v~D~~~s~~fY~~~lG~~~  270 (292)
                              ..++.|+++.|.|+++..+..++ .|.++
T Consensus        83 ~~~~~~~~~~g~~Hla~~v~dida~~~~l~~-~G~~~  118 (162)
T TIGR03645        83 PEDNFEYWKTGVFHFCVQDPDVEGLAERIVA-AGGKK  118 (162)
T ss_pred             CCcccccccccceEEEEEcCCHHHHHHHHHH-cCCcc
Confidence                    13578999999999999999976 67654

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=96.78  E-value=0.0016  Score=49.30  Aligned_cols=31  Identities=32%  Similarity=0.666  Sum_probs=28.8

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      +++|+.|.|.|++++.+||+++|||++....
T Consensus         2 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~   32 (117)
T cd07240           2 RIAYAELEVPDLERALEFYTDVLGLTVLDRD   32 (117)
T ss_pred             ceeEEEEecCCHHHHHHHHHhccCcEEEeec
Confidence            6899999999999999999999999999753

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=96.76  E-value=0.0017  Score=49.37  Aligned_cols=34  Identities=32%  Similarity=0.625  Sum_probs=30.5

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeecCC
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP  277 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~  277 (292)
                      ++.|+.+.|+|++++.+||+++|||++.......
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~   35 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNE   35 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccc
Confidence            5789999999999999999999999999875443

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=96.75  E-value=0.0016  Score=51.95  Aligned_cols=29  Identities=10%  Similarity=0.212  Sum_probs=26.6

Q ss_pred             eeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          246 CQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       246 ~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      +||.|.|+|++++.+||+++|||+++++.
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~   29 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLI   29 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeee
Confidence            58999999999999999999999987763

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=96.74  E-value=0.048  Score=41.88  Aligned_cols=85  Identities=19%  Similarity=0.232  Sum_probs=57.4

Q ss_pred             ceEEEEEeeCCHHHHHHHHHHc----CCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC--------CCCceeeee
Q 022769          183 GFGHFGIAVEDVAKTVDLVKAK----GGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT--------PEPLCQVML  250 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~~----G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~--------~~~l~hv~l  250 (292)
                      |++|+.+.|+|++++.+.+.+.    |.+.....   +.+   ..|+...++..+++.+....        ...+.|+.+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~---~~~---~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~hia~   74 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEW---EDG---RSWRAGDGGTYLVLQQADGESAGRHDRRNPGLHHLAF   74 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEee---ccC---ceEEecCCceEEEEEecccCCCcccccCCcCeeEEEE
Confidence            5789999999999998888775    88865332   111   12333345678888865532        235789999


Q ss_pred             ecCC---HHHHHHHHHHhcCCEEEeee
Q 022769          251 RVGD---LDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       251 ~v~D---~~~s~~fY~~~lG~~~~~~~  274 (292)
                      .|.|   ++++.+-+.. .|.++....
T Consensus        75 ~v~~~~d~~~~~~~l~~-~g~~~~~~~  100 (128)
T cd07242          75 RAPSREAVDELYARLAK-RGAEILYAP  100 (128)
T ss_pred             EcCCHHHHHHHHHHHHH-cCCeEecCC
Confidence            9976   5555555543 688888754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=96.74  E-value=0.002  Score=49.12  Aligned_cols=32  Identities=31%  Similarity=0.700  Sum_probs=29.3

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      .+++|+.+.|.|++++.+||+++|||++....
T Consensus         2 ~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~   33 (125)
T cd07253           2 KRIDHVVLTVADIEATLDFYTRVLGMEVVRFG   33 (125)
T ss_pred             cccceEEEEecCHHHHHHHHHHHhCceeeccc
Confidence            36899999999999999999999999998764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=96.72  E-value=0.0018  Score=49.37  Aligned_cols=31  Identities=32%  Similarity=0.549  Sum_probs=28.4

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .+|+|+.|.+.|++++.+||+++|||+....
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~   32 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAE   32 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEe
Confidence            3689999999999999999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=96.71  E-value=0.0018  Score=49.81  Aligned_cols=30  Identities=40%  Similarity=0.840  Sum_probs=28.3

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      +++|+.|.|.|++++.+||+++|||++...
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~   31 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLER   31 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEc
Confidence            589999999999999999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=96.71  E-value=0.043  Score=44.55  Aligned_cols=84  Identities=19%  Similarity=0.205  Sum_probs=55.7

Q ss_pred             ceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEEC-CCCCEEEEEEcCC------CCCCceeeeeecCC
Q 022769          183 GFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIED-PDGYKFELLERGP------TPEPLCQVMLRVGD  254 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~D-PdG~~iel~e~~~------~~~~l~hv~l~v~D  254 (292)
                      |++|+.+.|+|+++..+.+.+ .|.++....   .  ....++..+ .++..+++.+...      ....+.|+++.+.|
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~---~--~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~d   75 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEE---G--DRVRLEEGGGGPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVPD   75 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeee---C--CEEEEEecCCCCCCEEEEEeCCCCCCCcccCCceEEEEEECCC
Confidence            688999999999999998866 588875321   1  122222222 3578899987532      12468899999999


Q ss_pred             ---HHHHHHHHHHhcCCEEEe
Q 022769          255 ---LDRAINFYKKAFGMELLR  272 (292)
Q Consensus       255 ---~~~s~~fY~~~lG~~~~~  272 (292)
                         +++..+...+ .|+++..
T Consensus        76 ~~dvd~~~~~L~~-~Gv~~~~   95 (157)
T cd08347          76 DEELEAWKERLEA-LGLPVSG   95 (157)
T ss_pred             HHHHHHHHHHHHH-CCCCccc
Confidence               5555555543 5876543

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=96.70  E-value=0.0019  Score=49.87  Aligned_cols=29  Identities=17%  Similarity=0.441  Sum_probs=27.4

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEe
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLR  272 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~  272 (292)
                      ++.|+.|.|.|+++|.+||+++|||++..
T Consensus         4 ~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~   32 (123)
T cd08351           4 TLNHTIVPARDREASAEFYAEILGLPWAK   32 (123)
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEeee
Confidence            57999999999999999999999999876

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=96.69  E-value=0.0017  Score=49.68  Aligned_cols=30  Identities=33%  Similarity=0.546  Sum_probs=28.2

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      +++|+.|.|.|++++.+||+++|||++.+.
T Consensus         4 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~   33 (121)
T cd07266           4 RLGHVELRVTDLEKSREFYVDVLGLVETEE   33 (121)
T ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEecc
Confidence            689999999999999999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=96.65  E-value=0.0024  Score=50.04  Aligned_cols=30  Identities=23%  Similarity=0.404  Sum_probs=27.7

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      +++|+.|.|+|++++.+||+++|||++..+
T Consensus         4 ~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~   33 (131)
T cd08364           4 GLSHITLIVKDLNKTTAFLQNIFNAREVYS   33 (131)
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCeeEEe
Confidence            689999999999999999999999988654

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=96.64  E-value=0.0025  Score=50.96  Aligned_cols=31  Identities=23%  Similarity=0.524  Sum_probs=28.5

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .+++|+.|.|.|++++.+||+++|||++.+.
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~   33 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDW   33 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEe
Confidence            4789999999999999999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.55  E-value=0.15  Score=39.22  Aligned_cols=96  Identities=19%  Similarity=0.330  Sum_probs=54.0

Q ss_pred             CCHHHHHHHHHHhcCCEE-EEEeeCC------CCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCC--
Q 022769          123 GDLDKTIKFYTECLGMKL-LRKRDIP------EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED--  193 (292)
Q Consensus       123 ~Dle~a~~FY~~vLG~~~-~~~~~~~------~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~D--  193 (292)
                      .+.++|.+||+++||-.. ......+      .+....+.+..++    ..+......  +....+++ ..+++.++|  
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g----~~lm~~D~~--~~~~~~~~-~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGG----QKLMASDGG--PDFPFGNN-ISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETT----EEEEEEEES--TS----TT-EEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECC----eEEEEECCC--CCCCCCCc-EEEEEEcCCHH
Confidence            689999999999999533 3322222      2234445555443    122222222  22223344 357888887  


Q ss_pred             -HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEE
Q 022769          194 -VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (292)
Q Consensus       194 -l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~  236 (292)
                       +++++++|.+.|-          ... ....++|.-|+.|.|+
T Consensus        84 e~~~~f~~Ls~gG~----------~~~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ----------WFS-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE----------TCC-EEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC----------ccc-eeEEEEeCCCCEEEeC
Confidence             5667778887774          223 5678999999999875

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=96.51  E-value=0.0029  Score=48.47  Aligned_cols=27  Identities=30%  Similarity=0.469  Sum_probs=25.1

Q ss_pred             eeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          247 QVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       247 hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      |+.|.|+|++++++||+++|||++...
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~   28 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRS   28 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeec
Confidence            899999999999999999999998653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=96.49  E-value=0.0033  Score=49.78  Aligned_cols=30  Identities=33%  Similarity=0.707  Sum_probs=27.9

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      ++.|+.|.|+|++++.+||+++|||++..+
T Consensus         4 ~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~   33 (139)
T PRK04101          4 GINHICFSVSNLEKSIEFYEKVLGAKLLVK   33 (139)
T ss_pred             cEEEEEEEecCHHHHHHHHHhccCCEEEee
Confidence            689999999999999999999999998754

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=96.47  E-value=0.0029  Score=49.64  Aligned_cols=29  Identities=34%  Similarity=0.618  Sum_probs=26.7

Q ss_pred             ceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          245 LCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       245 l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      |+||.|.|+|++++.+||+++|||++...
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~   29 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVL   29 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEecc
Confidence            58999999999999999999999998754

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=96.45  E-value=0.088  Score=38.29  Aligned_cols=84  Identities=26%  Similarity=0.360  Sum_probs=63.6

Q ss_pred             EEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC-----CCCceeeeeecCCHHHHH
Q 022769          186 HFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----PEPLCQVMLRVGDLDRAI  259 (292)
Q Consensus       186 hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~-----~~~l~hv~l~v~D~~~s~  259 (292)
                      |+.+.|.|+++..+.+.+ .|.+.......   +.....++.++ +..++|....+.     ...+.|+.+.+.|+++..
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~---~~~~~~~~~~~-~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~   76 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN---GGAEFAVLGLG-GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDAAY   76 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc---CCEEEEEEecC-CceEEEecCCCCCCcccCCCeeEEEEECCCHHHHH
Confidence            789999999999999987 89887544221   22344556655 789999986653     357889999999999888


Q ss_pred             HHHHHhcCCEEEeee
Q 022769          260 NFYKKAFGMELLRKR  274 (292)
Q Consensus       260 ~fY~~~lG~~~~~~~  274 (292)
                      +-..+ .|..+....
T Consensus        77 ~~l~~-~g~~~~~~~   90 (112)
T cd06587          77 ERLKA-AGVEVLGEP   90 (112)
T ss_pred             HHHHH-cCCcccCCC
Confidence            88865 788887654

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=96.42  E-value=0.0042  Score=47.57  Aligned_cols=29  Identities=28%  Similarity=0.584  Sum_probs=26.3

Q ss_pred             ceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          245 LCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       245 l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      +.|++|.|+|++++.+||+++|||++...
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~   29 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFL   29 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEee
Confidence            46899999999999999999999998653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=96.41  E-value=0.0038  Score=47.29  Aligned_cols=29  Identities=34%  Similarity=0.635  Sum_probs=26.5

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      +|+|+.|.|.|++++.+||+ .|||++..+
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~   30 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREE   30 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEee
Confidence            68999999999999999997 799999764

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=96.41  E-value=0.008  Score=45.73  Aligned_cols=29  Identities=38%  Similarity=0.662  Sum_probs=26.6

Q ss_pred             ceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          245 LCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       245 l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      +.++.|.|.|++++.+||+++|||++...
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~   29 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK   29 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec
Confidence            46899999999999999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=96.37  E-value=0.0077  Score=46.11  Aligned_cols=32  Identities=31%  Similarity=0.336  Sum_probs=26.3

Q ss_pred             eeecCCHHHHHHHHHHhcCCEEEeeecCCCCc
Q 022769          249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYK  280 (292)
Q Consensus       249 ~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~  280 (292)
                      .|.|.|++++++||+++|||++......++..
T Consensus         4 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~   35 (122)
T cd08355           4 TLRYRDAAAAIDWLTDAFGFEERLVVPDDDGG   35 (122)
T ss_pred             EEEECCHHHHHHHHHHhcCCEEEEEEeCCCCc
Confidence            57889999999999999999998765444433

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=96.16  E-value=0.0052  Score=46.21  Aligned_cols=28  Identities=36%  Similarity=0.710  Sum_probs=25.6

Q ss_pred             eeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          247 QVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       247 hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      ||.|.|+|++++.+||+++|||++....
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~   28 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSS   28 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeecc
Confidence            7899999999999999999999987653

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=96.09  E-value=0.0071  Score=46.24  Aligned_cols=29  Identities=24%  Similarity=0.588  Sum_probs=26.5

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEe
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLR  272 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~  272 (292)
                      ++.++.|.|.|++++.+||+++|||++..
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~   30 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVM   30 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEee
Confidence            46789999999999999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=95.84  E-value=0.02  Score=43.41  Aligned_cols=33  Identities=45%  Similarity=0.608  Sum_probs=26.4

Q ss_pred             eeeecCCHHHHHHHHHHhcCCEEEeeecCCCCc
Q 022769          248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK  280 (292)
Q Consensus       248 v~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~  280 (292)
                      ..|.|.|++++.+||+++||+++......++..
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~   37 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGR   37 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCC
Confidence            357889999999999999999998765434433

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=95.76  E-value=0.011  Score=45.16  Aligned_cols=28  Identities=43%  Similarity=0.710  Sum_probs=25.7

Q ss_pred             eeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          246 CQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       246 ~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .|+.|.|+|++++.+||+++||++....
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~   30 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKV   30 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecc
Confidence            5899999999999999999999998764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=95.69  E-value=0.01  Score=45.35  Aligned_cols=27  Identities=26%  Similarity=0.631  Sum_probs=24.1

Q ss_pred             ceeeeeecCCHHHHHHHHHHhcCCEEEe
Q 022769          245 LCQVMLRVGDLDRAINFYKKAFGMELLR  272 (292)
Q Consensus       245 l~hv~l~v~D~~~s~~fY~~~lG~~~~~  272 (292)
                      ++|+.|.|.|+++|++||+ .|||++..
T Consensus         1 ~~~i~l~V~D~~~a~~FY~-~LGf~~~~   27 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYR-RLGFDFPE   27 (122)
T ss_pred             CceEEEEeccHHHHHHHHH-HhCceecC
Confidence            5799999999999999997 59999864

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=95.48  E-value=0.18  Score=40.50  Aligned_cols=86  Identities=23%  Similarity=0.206  Sum_probs=54.1

Q ss_pred             eEEEEEeeCCHHHHHHHHH-HcCCeeecCCeecC-CCCeEEEEEECCCCC-E-----EEEEEcCCCCCCceeeeeecCCH
Q 022769          184 FGHFGIAVEDVAKTVDLVK-AKGGKVTREPGPVK-GGNTVIAFIEDPDGY-K-----FELLERGPTPEPLCQVMLRVGDL  255 (292)
Q Consensus       184 ~~hia~~V~Dl~~~~~~L~-~~G~~i~~~p~~~~-~g~~~~~y~~DPdG~-~-----iel~e~~~~~~~l~hv~l~v~D~  255 (292)
                      +.|+++.|+|+++..+... ..|+++.... ..+ .+.....++.-.+|. .     +.+..  ....++.|+++.|.|+
T Consensus         2 i~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~--~~~~g~~Hiaf~v~di   78 (153)
T cd07257           2 LGHVVLEVPDFAASFDWYTETFGLKPSDVI-YLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ--GPESGVHHAAFEVHDF   78 (153)
T ss_pred             ccEEEEecCCHHHHHHHHHHhcCCeEEeeE-ecCCCCCcEEEEEecCCCCCcccchHHHHhc--CCCCceeEEEEEcCCH
Confidence            6799999999999988775 5788765321 111 112233445533332 1     22221  2246799999999999


Q ss_pred             HHHHHHHHH--hcCCEEEe
Q 022769          256 DRAINFYKK--AFGMELLR  272 (292)
Q Consensus       256 ~~s~~fY~~--~lG~~~~~  272 (292)
                      ++..+.+..  ..|+++..
T Consensus        79 e~~~~~~~~L~~~Gv~v~~   97 (153)
T cd07257          79 DAQGLGHDYLREKGYEHVW   97 (153)
T ss_pred             HHHHHHHHHHHHCCCcEee
Confidence            999844433  57888764

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=95.26  E-value=0.26  Score=40.21  Aligned_cols=88  Identities=10%  Similarity=0.117  Sum_probs=53.6

Q ss_pred             ceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEEC-CCCCEEEEEEcC-CCCCCceeeeeecCCHHHHH
Q 022769          183 GFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIED-PDGYKFELLERG-PTPEPLCQVMLRVGDLDRAI  259 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~D-PdG~~iel~e~~-~~~~~l~hv~l~v~D~~~s~  259 (292)
                      +++|+.+.|+|+++..+.+.+ .|++..... ..+.+.....++.- +....+.+.... ..+.++.|+.+.|.|.+...
T Consensus         6 ~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~hiaf~v~~~~~l~   84 (166)
T cd09014           6 RLDHVNLLASDVDANRDFMEEVLGFRLREQI-RLDNGKEAGAWMSVSNKVHDVAYTRDPAGARGRLHHLAYALDTREDVL   84 (166)
T ss_pred             eeeeEEEEcCCHHHHHHHHHHccCCEEEEEE-ecCCCceEEEEEeCCCCceeEEEecCCCCCCCCceEEEEECCCHHHHH
Confidence            788999999999999998864 788764221 11112222234443 333445544322 22457899999999877655


Q ss_pred             HHHHHh--cCCEEE
Q 022769          260 NFYKKA--FGMELL  271 (292)
Q Consensus       260 ~fY~~~--lG~~~~  271 (292)
                      +++.++  .|.++.
T Consensus        85 ~~~~~l~~~Gv~i~   98 (166)
T cd09014          85 RAADIFLENGIFIE   98 (166)
T ss_pred             HHHHHHHHcCCccc
Confidence            554433  666653

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>PF15067 FAM124: FAM124 family

Probab=94.95  E-value=0.22  Score=42.62  Aligned_cols=107  Identities=20%  Similarity=0.269  Sum_probs=62.4

Q ss_pred             ccceEEEEEEcC--CHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEec-CCCCCCcCCCceEEEE
Q 022769          112 KRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN-YGVDKYDIGTGFGHFG  188 (292)
Q Consensus       112 i~~i~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~-~~~~~~~~g~g~~hia  188 (292)
                      ...+--++|.|+  |.+.+++||+-+|+-+...+..    ++ ..|.-+...+-.+.+.+..- .+..+..  .--.-+.
T Consensus       126 G~EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~----~F-C~F~lys~~~~~iQlsLK~lp~~~~p~p--~esavLq  198 (236)
T PF15067_consen  126 GKEILRFTLYCSFDNYEDMVRFYELILQREPTQQKE----DF-CFFTLYSQPGLDIQLSLKQLPPGMSPEP--TESAVLQ  198 (236)
T ss_pred             cccEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC----Cc-EEEEEecCCCeEEEEEeccCCCCCCccc--ccceEEE
Confidence            346677889999  9999999999999988765532    12 23333333332333333332 1211111  1223478


Q ss_pred             EeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEE
Q 022769          189 IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  235 (292)
Q Consensus       189 ~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel  235 (292)
                      |.|.|+.++...|-.--.+++         ..+ ....|||||.|-+
T Consensus       199 F~V~~igqLvpLLPnpc~PIS---------~~r-WqT~D~DGNkILL  235 (236)
T PF15067_consen  199 FRVEDIGQLVPLLPNPCSPIS---------ETR-WQTEDYDGNKILL  235 (236)
T ss_pred             EEecchhhhcccCCCCccccc---------CCc-ceeeCCCCCEecc
Confidence            999999887655433322221         111 2468999999854

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=94.87  E-value=0.036  Score=41.25  Aligned_cols=26  Identities=31%  Similarity=0.730  Sum_probs=23.7

Q ss_pred             eeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          249 MLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       249 ~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      .|.|+|++++.+||+++|||++....
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~   28 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEH   28 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEc
Confidence            57899999999999999999998764

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.85  E-value=0.024  Score=42.89  Aligned_cols=26  Identities=31%  Similarity=0.508  Sum_probs=24.0

Q ss_pred             eeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          248 VMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       248 v~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      |.|.|.|++++.+||+++|||++...
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~   27 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSAD   27 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceeccc
Confidence            67899999999999999999999765

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.67  E-value=0.039  Score=41.81  Aligned_cols=27  Identities=22%  Similarity=0.504  Sum_probs=24.2

Q ss_pred             eeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          247 QVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       247 hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      +..|.|.|++++.+||+++|||++...
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~   30 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFD   30 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEec
Confidence            467899999999999999999998864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=94.61  E-value=0.037  Score=40.99  Aligned_cols=24  Identities=38%  Similarity=0.699  Sum_probs=22.4

Q ss_pred             eecCCHHHHHHHHHHhcCCEEEee
Q 022769          250 LRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       250 l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      |.|+|++++++||+++|||++...
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~   24 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFD   24 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEE
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEe
Confidence            579999999999999999999984

...

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.58  E-value=0.028  Score=42.34  Aligned_cols=26  Identities=31%  Similarity=0.474  Sum_probs=23.5

Q ss_pred             eeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          248 VMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       248 v~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      +.|.|.|++++++||+++|||++...
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~   27 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVEL   27 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCC
Confidence            57899999999999999999998763

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.57  E-value=0.47  Score=35.97  Aligned_cols=83  Identities=17%  Similarity=0.056  Sum_probs=54.1

Q ss_pred             eEEEEEeeCCHHHHHHHHHH----cCCeeecCCeecCCCCeEEEEEECC-CCCEEEEEEcCC----CCCCceeeeeecCC
Q 022769          184 FGHFGIAVEDVAKTVDLVKA----KGGKVTREPGPVKGGNTVIAFIEDP-DGYKFELLERGP----TPEPLCQVMLRVGD  254 (292)
Q Consensus       184 ~~hia~~V~Dl~~~~~~L~~----~G~~i~~~p~~~~~g~~~~~y~~DP-dG~~iel~e~~~----~~~~l~hv~l~v~D  254 (292)
                      +.|+.+.|+|++++.+-.++    .|.+.....   . + .. +.+..+ .+..+.+.....    ......|+.+.+.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~---~-~-~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~hi~f~v~~   74 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED---G-P-GA-VGYGKGGGGPDFWVTKPFDGEPATAGNGTHVAFAAPS   74 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec---C-C-ce-eEeccCCCCceEEEeccccCCCCCCCCceEEEEECCC
Confidence            46999999999999888876    488764332   1 1 12 334444 357777776532    23356799999998


Q ss_pred             HHHHHHHHHH--hcCCEEEe
Q 022769          255 LDRAINFYKK--AFGMELLR  272 (292)
Q Consensus       255 ~~~s~~fY~~--~lG~~~~~  272 (292)
                      .+...+++.+  ..|.++..
T Consensus        75 ~~~v~~~~~~~~~~g~~~~~   94 (123)
T cd07262          75 REAVDAFHAAALAAGGTDEG   94 (123)
T ss_pred             HHHHHHHHHHHHHcCCccCC
Confidence            7766666654  35665543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=94.51  E-value=0.15  Score=42.02  Aligned_cols=102  Identities=27%  Similarity=0.306  Sum_probs=56.3

Q ss_pred             eEEEEEeeCCHHHHHHHH-HHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC-----------------CCCc
Q 022769          184 FGHFGIAVEDVAKTVDLV-KAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----------------PEPL  245 (292)
Q Consensus       184 ~~hia~~V~Dl~~~~~~L-~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~-----------------~~~l  245 (292)
                      +.|+.+.|+|++++.+++ ++.|+++... +.++.++.....+.=++| .|||+...+.                 ..++
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~g-g~h~~~GT~N~li~f~~~-YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~   78 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPG-GEHPGWGTANALIPFGDG-YLELIAIDPEAPAPDRGRWFGLDRLAGGEGL   78 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEE-EE-TTT-EEEEEEE-SSS-EEEEEEES-HHHSTGGGT-TTTHHHHT--EE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCC-CcCCCCccEEEEEeeCCc-eEEEEEeCCcccccccccceechhhcCCCCe
Confidence            469999999999999999 8889998755 556653333222333667 9999975421                 2356


Q ss_pred             eeeeeecCCHHHHHHHHHHhcCCEEEeee--cCCCCcEEEEEcCC
Q 022769          246 CQVMLRVGDLDRAINFYKKAFGMELLRKR--DNPDYKVNSYLLPP  288 (292)
Q Consensus       246 ~hv~l~v~D~~~s~~fY~~~lG~~~~~~~--~~~~~~~~~~~~~~  288 (292)
                      ..+++.+.|+++..+-.. ..|++...+.  +....+|.+.+...
T Consensus        79 ~~~~l~t~d~~~~~~~l~-~~G~~~~~r~~~dG~~~~w~~~~~~~  122 (175)
T PF13468_consen   79 YGWALRTDDIEAVAARLR-AAGLDAGSRVRPDGGDLRWRLAFPED  122 (175)
T ss_dssp             EEEEEE-S-HHHHHHHHH-TTT-EEEEEEEEEE-EEEEEEEEEE-
T ss_pred             EEEEEecCCHHHHHHHHH-hcCCCCCCcCcCCCCcceEEEEEeCC
Confidence            779999999999999997 4897633322  22234566666544

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=94.24  E-value=0.11  Score=38.65  Aligned_cols=90  Identities=14%  Similarity=0.159  Sum_probs=40.3

Q ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCC-CcCCCceEEEEEeeC
Q 022769          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFGHFGIAVE  192 (292)
Q Consensus       114 ~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-~~~g~g~~hia~~V~  192 (292)
                      .+..+.|.|+| +++.+||+++||-++.         ....+...            +++...- ....-++.-+-|.|+
T Consensus         5 ~~e~i~LNV~d-~~~~~fy~~~f~~~~~---------~~l~f~ea------------~G~DL~~~~~~twDLe~Lkf~V~   62 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQSFYQSIFGGQLP---------FFLTFQEA------------QGPDLTIENNETWDLEMLKFQVP   62 (101)
T ss_dssp             EE-EEEEEE-T--T---S--H---HHHT---------TTEEEEE---------------CCGSS-TTSBSSEEEEEEEES
T ss_pred             EEEEEEEeCCC-hhHHHHHHhccccCCC---------ceEEEeec------------cCCccccCCCcEEeeEEEEEEec
Confidence            35678899999 8899999998862220         00111111            1101000 001126777889998


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEE
Q 022769          193 ---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF  233 (292)
Q Consensus       193 ---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~i  233 (292)
                         |+.++.+++.++++=+        +...+++.+.||.|+.+
T Consensus        63 ~~~Dl~~L~~~le~~~~fi--------dKk~k~l~~~Dps~IEl   98 (101)
T PF14507_consen   63 KDFDLAALKSHLEEQEFFI--------DKKEKFLVTSDPSQIEL   98 (101)
T ss_dssp             -S--HHHHHHHTTTS-EE----------TT-SEEEEE-TTS-EE
T ss_pred             CcccHHHHHHHhcccceEe--------cCCceEEEEECCcceEE
Confidence               5888888888855433        12445677889998765

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.23  E-value=1.3  Score=33.60  Aligned_cols=97  Identities=14%  Similarity=0.158  Sum_probs=57.1

Q ss_pred             EEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC------------CCCCCceeeeeec
Q 022769          185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG------------PTPEPLCQVMLRV  252 (292)
Q Consensus       185 ~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~------------~~~~~l~hv~l~v  252 (292)
                      +++.+.|.|+++..+-.++.|.+....   ......  ..+.-.++..+.+.+..            +.+....|+.+.+
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~lGf~~~~~---~~~~~~--~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~v   76 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTALGFEFNPQ---FSDEKA--ACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLSA   76 (124)
T ss_pred             EEEEeecCCHHHHHHHHHHCCCEEccc---cCCCCe--EEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEeC
Confidence            578999999999999888888876421   111111  22222345677776431            1123456889999


Q ss_pred             CCHHHHHHHHHHh--cCCEEEeeecCCCCcEEEEEc
Q 022769          253 GDLDRAINFYKKA--FGMELLRKRDNPDYKVNSYLL  286 (292)
Q Consensus       253 ~D~~~s~~fY~~~--lG~~~~~~~~~~~~~~~~~~~  286 (292)
                      .+.++..++|+++  .|.++..........|..+|.
T Consensus        77 ~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~  112 (124)
T cd09012          77 DSREEVDELVEKALAAGGKEFREPQDHGFMYGRSFA  112 (124)
T ss_pred             CCHHHHHHHHHHHHHCCCcccCCcccCCceEEEEEE
Confidence            9777666666654  677766532222333444443

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=93.98  E-value=0.012  Score=47.20  Aligned_cols=46  Identities=37%  Similarity=0.515  Sum_probs=40.9

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCCC
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPN  289 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~  289 (292)
                      .+.|.++++.|+.+|..||++++||.+...+++++..|...|+++.
T Consensus        22 ~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~   67 (170)
T KOG2944|consen   22 LLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAE   67 (170)
T ss_pred             hhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhccc
Confidence            5788999999999999999999999999988888888888888874

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=93.82  E-value=0.12  Score=39.39  Aligned_cols=26  Identities=27%  Similarity=0.447  Sum_probs=22.9

Q ss_pred             eeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          248 VMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       248 v~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      ..|.|.|++++++||++ |||++....
T Consensus         6 ~~l~v~Dl~~s~~FY~~-lG~~~~~~~   31 (120)
T cd08350           6 PNLPSRDLDATEAFYAR-LGFSVGYRQ   31 (120)
T ss_pred             ceeEcCCHHHHHHHHHH-cCCEEEecC
Confidence            46889999999999999 999998653

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=93.77  E-value=1.3  Score=35.75  Aligned_cols=84  Identities=21%  Similarity=0.245  Sum_probs=51.0

Q ss_pred             ceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCC-CEEEEEEcCCCCCCceeeeeecCCHHHHHH
Q 022769          183 GFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDG-YKFELLERGPTPEPLCQVMLRVGDLDRAIN  260 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG-~~iel~e~~~~~~~l~hv~l~v~D~~~s~~  260 (292)
                      +++|+++.|+|+++..+-..+ .|.++..... .+.+.....++...++ +.+.+..  .....+.|+.+.+.|.+...+
T Consensus         3 ~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~-~~~~~~~~~~l~~~~~~~~i~l~~--~~~~~~~Hiaf~v~~~~~v~~   79 (161)
T cd07256           3 RLDHFNLRVPDVDAGLAYYRDELGFRVSEYTE-DDDGTTWAAWLHRKGGVHDTALTG--GNGPRLHHVAFWVPEPHNIIR   79 (161)
T ss_pred             eEEEEEEecCCHHHHHHHHHhccCCEEEEEec-cCCCcEEEEEEecCCCcceEEEec--CCCCceeEEEEEcCCHHHHHH
Confidence            689999999999999988876 7887642111 1122223345544333 3344432  222368999999987555544


Q ss_pred             HHHH--hcCCE
Q 022769          261 FYKK--AFGME  269 (292)
Q Consensus       261 fY~~--~lG~~  269 (292)
                      .+..  ..|.+
T Consensus        80 ~~~~L~~~G~~   90 (161)
T cd07256          80 TCDLLAAAGYS   90 (161)
T ss_pred             HHHHHHHcCCC
Confidence            4433  35665

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=93.18  E-value=0.098  Score=39.70  Aligned_cols=29  Identities=28%  Similarity=0.446  Sum_probs=26.6

Q ss_pred             ceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          245 LCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       245 l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      +-|+.+.|+|++++.+||.++||.+.-+.
T Consensus         5 ~FHLA~pV~Dl~~tr~FYgevlG~~~GRs   33 (138)
T COG3565           5 PFHLAIPVNDLDETRRFYGEVLGCKEGRS   33 (138)
T ss_pred             ceEEeeeccccHHHHhhhhhhcccccccc
Confidence            56899999999999999999999998765

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.95  E-value=2.8  Score=30.98  Aligned_cols=80  Identities=20%  Similarity=0.243  Sum_probs=55.1

Q ss_pred             EEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCC--CCEEEEEEcCCCCCCceeeeeecCCHHHHHHHHH
Q 022769          187 FGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPD--GYKFELLERGPTPEPLCQVMLRVGDLDRAINFYK  263 (292)
Q Consensus       187 ia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPd--G~~iel~e~~~~~~~l~hv~l~v~D~~~s~~fY~  263 (292)
                      -.+.|+|+++..+...+ .|.+....     .+  ...++..++  +..+.+...........|+.+.|.|++++.+.+.
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~d~~~~~~~l~   76 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMD-----HG--WIATFASPQNMTVQVSLATEGGTATVVPDLSIEVDDVDAALARAV   76 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEc-----CC--ceEEEeecCCCCcEEEEecCCCCCCCCCEEEEEeCCHHHHHHHHH
Confidence            36778999999998876 89886422     12  223344433  4556666544334456799999999999999886


Q ss_pred             HhcCCEEEeee
Q 022769          264 KAFGMELLRKR  274 (292)
Q Consensus       264 ~~lG~~~~~~~  274 (292)
                      + .|.++....
T Consensus        77 ~-~G~~~~~~~   86 (112)
T cd07238          77 A-AGFAIVYGP   86 (112)
T ss_pred             h-cCCeEecCC
Confidence            4 899887643

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.22  E-value=0.12  Score=39.07  Aligned_cols=25  Identities=24%  Similarity=0.504  Sum_probs=21.9

Q ss_pred             eeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          248 VMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       248 v~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      ..|.|+|++++++||++ |||++...
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~   29 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWE   29 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEec
Confidence            35789999999999987 99999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=88.73  E-value=0.85  Score=36.11  Aligned_cols=29  Identities=34%  Similarity=0.541  Sum_probs=25.2

Q ss_pred             eecC-CHHHHHHHHHHhcCCEEEeeecCCC
Q 022769          250 LRVG-DLDRAINFYKKAFGMELLRKRDNPD  278 (292)
Q Consensus       250 l~v~-D~~~s~~fY~~~lG~~~~~~~~~~~  278 (292)
                      |... |-+++++||+++||.++..+....+
T Consensus         6 l~f~gn~~~Al~fY~~vFgae~~~~~~~~d   35 (136)
T COG2764           6 LFFNGNAREALAFYKEVFGAEELKRVPFGD   35 (136)
T ss_pred             EEECCCHHHHHHHHHHHhCceEEEEEEcCc
Confidence            5566 9999999999999999998876666

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=87.19  E-value=1.1  Score=34.65  Aligned_cols=26  Identities=31%  Similarity=0.620  Sum_probs=22.7

Q ss_pred             eeec-CCHHHHHHHHHHhcCCEEEeee
Q 022769          249 MLRV-GDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       249 ~l~v-~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      .|.+ .|.+++++||+++||+++....
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~   30 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLT   30 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEE
Confidence            3556 8999999999999999999765

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=85.14  E-value=0.91  Score=34.89  Aligned_cols=27  Identities=41%  Similarity=0.732  Sum_probs=22.5

Q ss_pred             eeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          247 QVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       247 hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      +-+++|.|-+..++||++.|||++..+
T Consensus         3 ~PvlRVnnR~~ni~FY~~~LGfkll~E   29 (125)
T PF14506_consen    3 IPVLRVNNRDLNIDFYQKTLGFKLLSE   29 (125)
T ss_dssp             EEEEEESSHHHHHHHHTTTT--EEEEE
T ss_pred             CceEEEcCHHHhHHHHHhccCcEEeec
Confidence            347899999999999999999999975

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=84.42  E-value=1  Score=34.89  Aligned_cols=30  Identities=30%  Similarity=0.454  Sum_probs=24.4

Q ss_pred             eeeeecCCHHHHHHHHHHhcCCEEEeeecCC
Q 022769          247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNP  277 (292)
Q Consensus       247 hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~  277 (292)
                      .|.|.|.|+++|.+||+ .|||+.-....++
T Consensus         6 FvNLPVkDL~~S~~Fy~-alGfk~Npq~sde   35 (133)
T COG3607           6 FVNLPVKDLEASKAFYT-ALGFKFNPQFSDE   35 (133)
T ss_pred             EEecchhhHHHHHHHHH-HhCcccCCCcccc
Confidence            57899999999999997 5999987654333

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=83.95  E-value=9.6  Score=31.76  Aligned_cols=78  Identities=22%  Similarity=0.304  Sum_probs=38.4

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEE-E----eeCCCCceEEEEEEecCCCCCCcCCCceEEE
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAF-L----GYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  187 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~-l----~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hi  187 (292)
                      ..++|++++|++.+.+.+|-+..+..-..-....-.|+....+ +    ..++ ..--.+||..+.. ..+ +-.|+-||
T Consensus        33 ~~~DHialRvn~~~~A~~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~-~~I~~vELP~P~~-K~Y-p~eGWEHI  109 (185)
T PF06185_consen   33 YEIDHIALRVNSNETAERWKQALLQCGELLSENMINGRPICLFKLNQPLQFGG-WSIDCVELPYPKD-KRY-PQEGWEHI  109 (185)
T ss_dssp             -EEEEEEEE-S-HHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETT-EEEEEEEEE---S-S---SS-EEEEE
T ss_pred             cCCcEEEEecCCHHHHHHHHHHHHHhChhhhhceeCCeeEEEEEcCCchhcCC-eeEEEEEeCCCCC-CCC-CCCCceEE
Confidence            4689999999999999999998876543332211122211111 1    1111 1112345554332 222 34599999


Q ss_pred             EEeeCC
Q 022769          188 GIAVED  193 (292)
Q Consensus       188 a~~V~D  193 (292)
                      .|.++.
T Consensus       110 E~Vip~  115 (185)
T PF06185_consen  110 EFVIPS  115 (185)
T ss_dssp             EEE--S
T ss_pred             EEEecC
Confidence            999984

; PDB: 1K4N_A.

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=83.59  E-value=1  Score=41.24  Aligned_cols=27  Identities=48%  Similarity=0.733  Sum_probs=24.5

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEE
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMEL  270 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~  270 (292)
                      .--||+|.|+|+++|.+||+++||+..
T Consensus       247 ~~IfVNLpV~DL~rS~~FYt~LF~~n~  273 (357)
T PRK01037        247 KTFSVVLEVQDLRRAKKFYSKMFGLEC  273 (357)
T ss_pred             ceEEEEeeeCCHHHHHHHHHHHhCCCC
Confidence            556899999999999999999999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	292
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		4e-41
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		3e-07
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		3e-30
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		5e-05
3zi1_A	330	Crystal Structure Of Human Glyoxalase Domain-contai		6e-21
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		2e-13
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		3e-04
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		5e-13
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		5e-13
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		1e-12

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  164 bits (416), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 73/125 (58%), Positives = 97/125 (77%)
Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61
Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121
Query: 234 ELLER 238
           EL+E 
Sbjct: 122 ELIEE 126

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 27/36 (75%)
Query: 245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           L   MLRVGDL R+I+FY K  GM+LLR  +NP+YK
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYK 38

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score =  128 bits (322), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/124 (54%), Positives = 82/124 (66%), Gaps = 5/124 (4%)
Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           RRMLH + RVGDLD++IKFYTE LGMK+LRK D+PED+YT  FLGYGPE S  V+ELTYN
Sbjct: 7   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 66
Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
           YGV  Y     +GH  I VEDV + V  ++     +  E       +  +AF+ DPDGY 
Sbjct: 67  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYED-----ESGFMAFVVDPDGYY 121
Query: 233 FELL 236
            ELL
Sbjct: 122 IELL 125

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           +   M+RVGDLDR+I FY +  GM++LRK D P+ K
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDK 44

>pdb|3ZI1|A Chain A, Crystal Structure Of Human Glyoxalase Domain-containing Protein 4 (glod4) Length = 330

Iteration: 1
 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 87/170 (51%), Gaps = 22/170 (12%)
Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-----------RYTNAFLGYGPE 161
           RR LH V++VG+  +T +FY + LGMK+LR  +  E            +++   +G+GPE
Sbjct: 26  RRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 85
Query: 162 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 221
           D HFV ELTYNYGV  Y +G  F   GI +       +  K +         P+      
Sbjct: 86  DDHFVAELTYNYGVGDYKLGNDF--MGITLASSQAVSNARKLE--------WPLTEVAEG 135
Query: 222 IAFIEDPDGYKFELLERG-PTPEPLCQVMLRVGDLDRAINFYKKAFGMEL 270
           +   E P GYKF L  R  P  +P+ +V L V DL +++N++    GM++
Sbjct: 136 VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKI 185

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 30/148 (20%)
Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYG-----PEDS------ 163
           +   + R+ D  K++ FYT  LG+ LL+K D P  +++  FL Y      P+D       
Sbjct: 32  LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAW 91
Query: 164 ----HFVVELTYNYGVDKYDIGT---------GFGHFGIAVEDVAKTVDLVKAKGGKVTR 210
                  +ELT+N+G +  +  +         GFGH GIAV DV       +  G K  +
Sbjct: 92  TFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 151
Query: 211 EP--GPVKGGNTVIAFIEDPDGYKFELL 236
           +P  G +KG    +AFI+DPDGY  E+L
Sbjct: 152 KPDDGKMKG----LAFIQDPDGYWIEIL 175

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 211 EPGPVKGG---NTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFG 267
           EP P   G    T  +   DPD    + L        L Q MLR+ D  ++++FY +  G
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54
Query: 268 MELLRKRDNPDYKVNSYLL 286
           + LL+K D P  K + Y L
Sbjct: 55  LTLLQKLDFPAMKFSLYFL 73

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 34/150 (22%)
Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV-------- 166
           +   + RV D  K++ FYT  LGM L++K D P  +++  FL Y  ED + +        
Sbjct: 31  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKI 88
Query: 167 ---------VELTYNYGVDKYDIGT---------GFGHFGIAVEDVAKTVDLVKAKGGKV 208
                    +ELT+N+G +  +  +         GFGH GIAV DV       +  G K 
Sbjct: 89  AWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKF 148
Query: 209 TREP--GPVKGGNTVIAFIEDPDGYKFELL 236
            ++P  G +KG    +AFI+DPDGY  E+L
Sbjct: 149 VKKPDDGKMKG----LAFIQDPDGYWIEIL 174

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 34/150 (22%)
Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV-------- 166
           +   + RV D  K++ FYT  LGM L++K D P  +++  FL Y  ED + +        
Sbjct: 35  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKI 92
Query: 167 ---------VELTYNYGVDKYDIGT---------GFGHFGIAVEDVAKTVDLVKAKGGKV 208
                    +ELT+N+G +  +  +         GFGH GIAV DV       +  G K 
Sbjct: 93  AWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKF 152
Query: 209 TREP--GPVKGGNTVIAFIEDPDGYKFELL 236
            ++P  G +KG    +AFI+DPDGY  E+L
Sbjct: 153 VKKPDDGKMKG----LAFIQDPDGYWIEIL 178

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 85/176 (48%), Gaps = 39/176 (22%)
Query: 94  PTSNTVTEQNVL----DWVKSDKRRMLH-VVYRVGDLDKTIKFYTECLGMKLLRKRDIPE 148
           P S  +T++  L    D   S K  +L   + RV D  K++ FYT  LGM L++K D P 
Sbjct: 5   PPSGGLTDEAALSCCSDADPSTKDFLLQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPI 64
Query: 149 DRYTNAFLGYGPEDSHFV-----------------VELTYNYGVDKYDIGT--------- 182
            +++  FL Y  ED + +                 +ELT+N+G +  +  +         
Sbjct: 65  MKFSLYFLAY--EDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPR 122
Query: 183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREP--GPVKGGNTVIAFIEDPDGYKFELL 236
           GFGH GIAV DV       +  G K  ++P  G +KG    +AFI+DPDGY  ++L
Sbjct: 123 GFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG----LAFIQDPDGYWIQIL 174

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	292
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	3e-65
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	1e-11
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	9e-65
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	1e-11
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	8e-47
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	4e-17
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	3e-41
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	2e-09
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	2e-04
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	7e-38
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	7e-10
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	1e-34
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	8e-09
2p25_A	126	Glyoxalase family protein; structural genomics, MC	6e-34
2p25_A	126	Glyoxalase family protein; structural genomics, MC	1e-07
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	3e-33
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	2e-07
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	4e-31
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	1e-06
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	4e-28
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	6e-05
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	6e-28
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-05
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	4e-27
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	2e-13
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	4e-26
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	1e-07
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	6e-26
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	1e-04
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-23
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-06
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	8e-22
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	1e-05
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	1e-21
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	4e-05
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	6e-21
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	2e-19
3ghj_A	141	Putative integron gene cassette protein; integron	5e-19
3ghj_A	141	Putative integron gene cassette protein; integron	8e-05
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	3e-18
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	3e-06
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	3e-18
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	4e-04
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	5e-18
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	2e-04
3huh_A	152	Virulence protein STM3117; structural genomics, ny	5e-18
3huh_A	152	Virulence protein STM3117; structural genomics, ny	1e-04
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	7e-18
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	2e-05
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-17
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-04
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	2e-16
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	5e-04
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	3e-16
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	4e-16
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	2e-05
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	6e-16
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	5e-09
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	1e-15
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	8e-05
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	1e-15
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	3e-04
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	2e-15
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	6e-05
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-15
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-04
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	2e-15
1nki_A	135	Probable fosfomycin resistance protein; potassium	5e-15
1nki_A	135	Probable fosfomycin resistance protein; potassium	3e-04
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	6e-15
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	8e-15
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	2e-14
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	3e-08
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-14
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	7e-14
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	6e-05
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	1e-13
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	2e-13
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	3e-06
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	4e-13
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-07
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	4e-13
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	5e-13
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	7e-13
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	1e-12
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	1e-12
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	7e-05
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	4e-12
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	2e-04
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	6e-12
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	7e-04
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	6e-12
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	3e-11
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	7e-08
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	5e-11
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	3e-10
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	9e-08
2i7r_A	118	Conserved domain protein; structural genomics cons	3e-10
2i7r_A	118	Conserved domain protein; structural genomics cons	1e-04
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	4e-10
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	1e-07
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	5e-10
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	9e-06
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	3e-09
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	4e-09
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	4e-09
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	2e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	3e-07
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	4e-07
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	6e-07
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	9e-07
1xy7_A	166	Unknown protein; structural genomics, protein stru	2e-06
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	2e-05
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	9e-05
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	5e-04

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  200 bits (510), Expect = 3e-65
 Identities = 70/143 (48%), Positives = 84/143 (58%), Gaps = 5/143 (3%)

Query: 112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 171
            RRMLH + RVGDLD++IKFYTE LGMK+LRK D+PED+YT  FLGYGPE S  V+ELTY
Sbjct: 6   SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTY 65

Query: 172 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 231
           NYGV  Y     +GH  I VEDV + V  ++     +  E          +AF+ DPDGY
Sbjct: 66  NYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES-----GFMAFVVDPDGY 120

Query: 232 KFELLERGPTPEPLCQVMLRVGD 254
             ELL      E     M   G 
Sbjct: 121 YIELLNEKTMMEKAEADMKEQGT 143

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score = 60.1 bits (146), Expect = 1e-11
 Identities = 20/40 (50%), Positives = 26/40 (65%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLL 286
             M+RVGDLDR+I FY +  GM++LRK D P+ K     L
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFL 50

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  198 bits (506), Expect = 9e-65
 Identities = 74/132 (56%), Positives = 98/132 (74%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 234 ELLERGPTPEPL 245
           EL+E       L
Sbjct: 122 ELIEEKDAGRGL 133

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score = 60.1 bits (146), Expect = 1e-11
 Identities = 21/40 (52%), Positives = 28/40 (70%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLL 286
             MLRVGDL R+I+FY K  GM+LLR  +NP+YK +   +
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFV 44

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  154 bits (390), Expect = 8e-47
 Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 31/181 (17%)

Query: 94  PTSNTVTEQNVLDWVKS-----DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE 148
           P S+ +T++                 +   + R+ D  K++ FYT  LG+ LL+K D P 
Sbjct: 6   PASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPA 65

Query: 149 DRYTNAFLGYGPED---------------SHFVVELTYNYGVD-----KYDIG----TGF 184
            +++  FL Y  ++                   +ELT+N+G +      Y  G     GF
Sbjct: 66  MKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNSDPRGF 125

Query: 185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP 244
           GH GIAV DV       +  G K  ++P    G    +AFI+DPDGY  E+L        
Sbjct: 126 GHIGIAVPDVYSACKRFEELGVKFVKKPDD--GKMKGLAFIQDPDGYWIEILNPNKIATI 183

Query: 245 L 245
           +
Sbjct: 184 I 184

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 76.6 bits (188), Expect = 4e-17
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 11/79 (13%)

Query: 211 EPGPVKGG---NTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFG 267
           EP P   G    T  +   DPD    + L        L Q MLR+ D  ++++FY +  G
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54

Query: 268 MELLRKRDNPDYKVNSYLL 286
           + LL+K D P  K + Y L
Sbjct: 55  LTLLQKLDFPAMKFSLYFL 73

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score =  139 bits (351), Expect = 3e-41
 Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 6/137 (4%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           ++ H+   V  +   + FY   L +KLL   D+P      AFL  G      +  L+   
Sbjct: 8   KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEES 67

Query: 174 GVDKY--DIGTGFGHFGIAVEDVAKTVDLVKAKGGKV-TREPGPVKGGNTVIAFI--EDP 228
            + K+    G G  H  I V+ + + +  VK  G ++   EP P   G   +AF+     
Sbjct: 68  PIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQ-VAFLHPRSA 126

Query: 229 DGYKFELLERGPTPEPL 245
            G  +E  E+    E L
Sbjct: 127 RGVLYEFCEKKEQAENL 143

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 54.4 bits (131), Expect = 2e-09
 Identities = 8/36 (22%), Positives = 15/36 (41%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVN 282
            + + V  +   + FY  +  ++LL   D P   V 
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVK 46

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 13/99 (13%)

Query: 186 HFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE-------- 237
           H GIAV  +   +                +      IAF+E  +  K ELLE        
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGES-KIELLEPLSEESPI 69

Query: 238 ---RGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRK 273
                   E +  + + V  ++  I   K+  G++++  
Sbjct: 70  AKFIQKRGEGIHHIAIGVKSIEERIQEVKEN-GVQMIND 107

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score =  129 bits (327), Expect = 7e-38
 Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R+ HV   V DL+K   FY   LG ++     +PE   +  F+  G      +  L  +
Sbjct: 4   GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLD 63

Query: 173 YGVDKY---DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--ED 227
             +  +   +   G  H  I V+++   V  +K K  +   E   +      + F+  +D
Sbjct: 64  SPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKD 123

Query: 228 PDGYKFELLE 237
             G   EL +
Sbjct: 124 CGGVLVELEQ 133

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 55.1 bits (133), Expect = 7e-10
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLP 287
            V + V DL++A  FYK   G ++      P++ V+   + 
Sbjct: 8   HVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVN 48

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  121 bits (305), Expect = 1e-34
 Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 10/133 (7%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF----VVE 168
           + + HV   V D DK+ +FY   LG +++R+   P+       L  G  +       + +
Sbjct: 4   KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTD 63

Query: 169 LTYNYGVDKYDI---GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN-TVIAF 224
             Y    ++        G  H    VEDV  +   + A G  +  E           +AF
Sbjct: 64  SNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALG--IRVEEVRYDDYTGKKMAF 121

Query: 225 IEDPDGYKFELLE 237
             DPDG   EL E
Sbjct: 122 FFDPDGLPLELHE 134

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 52.4 bits (126), Expect = 8e-09
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPD 278
           V L V D D++  FY    G E++R+   P 
Sbjct: 9   VALIVSDYDKSYEFYVNQLGFEVIRENHRPK 39

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  119 bits (300), Expect = 6e-34
 Identities = 31/126 (24%), Positives = 46/126 (36%), Gaps = 4/126 (3%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + + HV     +   T  FY E LG ++LR+   PE       L  G ++          
Sbjct: 4   KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEI-FISDQF 62

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV-IAFIEDPDGY 231
                Y    G  H    VE + + +  +  +G  +  EP  V       + F  DPDG 
Sbjct: 63  PARPSYPEALGLRHLAFKVEHIEEVIAFLNEQG--IETEPLRVDDFTGKKMTFFFDPDGL 120

Query: 232 KFELLE 237
             EL E
Sbjct: 121 PLELHE 126

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           V +   +     NFY +  G E+LR+   P+  
Sbjct: 9   VAINASNYQATKNFYVEKLGFEVLRENHRPEKN 41

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score =  118 bits (296), Expect = 3e-33
 Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 14/133 (10%)

Query: 114 RMLHVVYR--VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 171
           ++L ++ R  V DL+  ++FY E L   +  + +IP+     A +      +        
Sbjct: 4   KILQILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIA-------- 55

Query: 172 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 231
             G ++             V+ + K    ++  G ++ R P  V  G      +   DG 
Sbjct: 56  --GSEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRN--MTVRHSDGS 111

Query: 232 KFELLERGPTPEP 244
             E +E       
Sbjct: 112 VIEYVEHSKIEAE 124

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 48.7 bits (116), Expect = 2e-07
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKV 281
             L V DL+ A+ FY++     +  + + P   V
Sbjct: 10  SRLYVADLNPALEFYEELLETPVAMRFEIPQTGV 43

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score =  112 bits (281), Expect = 4e-31
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 10/131 (7%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           ++ H+ Y V ++D  +K +     ++          +    F+  G     + VEL    
Sbjct: 7   KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPD 62

Query: 174 GVDK-----YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG-GNTVIAFIED 227
           G D         G+   H    VED+ K+++ +   G  + ++        N  +AF+  
Sbjct: 63  GEDSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 228 PDGYKFELLER 238
            D    ELLE+
Sbjct: 123 TDIGLIELLEK 133

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 45.9 bits (109), Expect = 1e-06
 Identities = 7/40 (17%), Positives = 16/40 (40%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLP 287
           +   V ++D A+  +K+   +E      +   KV    + 
Sbjct: 11  IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVI 50

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score =  105 bits (263), Expect = 4e-28
 Identities = 24/140 (17%), Positives = 43/140 (30%), Gaps = 12/140 (8%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED--------RYTNAFLGYGPEDSH 164
           R++ H+   V D+  +  FY   LG+  L   ++P          +  N     G     
Sbjct: 18  RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDL 77

Query: 165 FVVELTYNYGVDKYDIGTGFGHFGIAVED--VAKTVDLVKAKGGKVTREPGPVKGGNTVI 222
           F          +     T   H    ++     + V ++      +    GPV       
Sbjct: 78  FGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENK--IAIAHGPVTRPTGRG 135

Query: 223 AFIEDPDGYKFELLERGPTP 242
            +  DPDG+  E+       
Sbjct: 136 VYFYDPDGFMIEIRCDPEAE 155

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 41.8 bits (98), Expect = 6e-05
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPD 278
           + L V D+  +  FY    G+  L   + P 
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPA 53

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score =  104 bits (261), Expect = 6e-28
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 5/133 (3%)

Query: 108 VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV 167
            +S+  R+      V D  K   FYT  LG  +     +  DR+        P+ +  ++
Sbjct: 20  FQSNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLL 79

Query: 168 ELTYNYGVDKYD---IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 224
           E + +  V  +    +  G      AV+D+A   + + A G + T+EP  +     V A 
Sbjct: 80  EPSSHAAVTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPV--VTAI 137

Query: 225 IEDPDGYKFELLE 237
           ++D  G   +L++
Sbjct: 138 LDDTCGNLIQLMQ 150

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 42.0 bits (98), Expect = 5e-05
 Identities = 6/36 (16%), Positives = 12/36 (33%)

Query: 245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           +    + V D  +A +FY    G  +         +
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADR 62

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score =  105 bits (264), Expect = 4e-27
 Identities = 36/168 (21%), Positives = 51/168 (30%), Gaps = 18/168 (10%)

Query: 122 VGDLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYNYGVDKYD 179
             D     KFYT   G        +P     Y+ A L         V  +          
Sbjct: 40  TTDQSAAKKFYTSLFGWGY-DDNPVPGGGGVYSMATLNGEA-----VAAIAPMPPGAPEG 93

Query: 180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 239
           +   +  + IAV+DV   VD V   GG+V      + G    ++FI DP G    L +  
Sbjct: 94  MPPIWNTY-IAVDDVDAVVDKVVPGGGQVMMPAFDI-GDAGRMSFITDPTGAAVGLWQAN 151

Query: 240 P--------TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
                        L    L     D A+ FY+   G+           
Sbjct: 152 RHIGATLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQ 199

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 68.0 bits (166), Expect = 2e-13
 Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 14/142 (9%)

Query: 101 EQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGP 160
            +++   + ++   ++         D  + FY   +G+            Y     G   
Sbjct: 151 NRHIGATLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAE 210

Query: 161 EDSHFVVELTYNYGVDKYDIGTGFGHFGI--AVEDVAKTVDLVKAKGGKVTREPGPVKGG 218
                        G  +  +     H+ +  AV+D   T     A GG+V  EP  +   
Sbjct: 211 V-----------GGCMEPPMPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSV 259

Query: 219 NTVIAFIEDPDGYKFELLERGP 240
               A + DP G  F +L+  P
Sbjct: 260 -GRFAVLSDPQGAIFSVLKAAP 280

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 98.9 bits (246), Expect = 4e-26
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 9/127 (7%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           ++ HV     +L++  +FY    G       +     + + FL +   +    +E+    
Sbjct: 3   KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSF---EDGARLEIMSRT 59

Query: 174 GVD--KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDP 228
            V         G+ H  I+    E V +  + ++  G  +  EP    G     + + DP
Sbjct: 60  DVTGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGYYESVVLDP 118

Query: 229 DGYKFEL 235
           +G + E+
Sbjct: 119 EGNRIEI 125

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 48.8 bits (116), Expect = 1e-07
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLL 286
           V L   +L++   FY   FG       +N     NSY L
Sbjct: 7   VALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFL 45

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 99.2 bits (247), Expect = 6e-26
 Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 20/143 (13%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE----------D 162
            RM +V   V  LD  I F+ E +G+ L  + ++ E  +     G G +          D
Sbjct: 10  LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANV-EGEWAGRVTGLGSQCVEIAMMVTPD 67

Query: 163 SHFVVELTYNYGVDKYDI-------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPV 215
            H  +EL+                   G+      VED+ + V  +   G ++  E    
Sbjct: 68  GHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEV-VQ 126

Query: 216 KGGNTVIAFIEDPDGYKFELLER 238
              +  + +I   +G    L E 
Sbjct: 127 YENSYRLCYIRGVEGILIGLAEE 149

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 40.6 bits (95), Expect = 1e-04
 Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPN 289
           V + V  LD AI+F+ +  G+ L  + +             +
Sbjct: 15  VSIVVESLDNAISFF-EEIGLNLEGRANVEGEWAGRVTGLGS 55

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 92.4 bits (229), Expect = 2e-23
 Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 16/128 (12%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF----VVELTYNYGVD 176
              D++ +  F+ + LG ++  +R  P++ +   +L     D            +  G  
Sbjct: 12  YCFDINVSQSFFVDVLGFEVKYER--PDEEF--VYLTLDGVDVMLEGIAGKSRKWLSGDL 67

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGP---VKGGNTVIA----FIEDPD 229
           ++ +G+G  +F   V D+      V                 + G+++       ++ PD
Sbjct: 68  EFPLGSGV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPD 126

Query: 230 GYKFELLE 237
           GY F   +
Sbjct: 127 GYLFRFCQ 134

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 44.6 bits (105), Expect = 4e-06
 Identities = 6/36 (16%), Positives = 17/36 (47%)

Query: 249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSY 284
            L   D++ + +F+    G E+  +R + ++   + 
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKYERPDEEFVYLTL 45

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 88.7 bits (220), Expect = 8e-22
 Identities = 24/134 (17%), Positives = 38/134 (28%), Gaps = 14/134 (10%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE---- 168
             ++       DLD    FY +  G++++ K           F   G +           
Sbjct: 7   SAIMETALYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESS 61

Query: 169 LTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 225
                         G GHF        +V +     +A    V        G  +V  +I
Sbjct: 62  RADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSV--YI 119

Query: 226 EDPDGYKFELLERG 239
            DP G   E+ E  
Sbjct: 120 RDPAGNSVEVGEGK 133

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDN 276
             L   DLD A  FY+  FG+E++ K   
Sbjct: 12  TALYADDLDAAEAFYRDVFGLEMVLKLPG 40

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 87.7 bits (217), Expect = 1e-21
 Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 5/118 (4%)

Query: 122 VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG 181
             D D+   FY +  G  +    +IP+  Y+    G   E          N G+ +    
Sbjct: 33  FDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEV 89

Query: 182 TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 239
           T      + VE +   ++ +++ GGK      PV G     A+  D +G    L E  
Sbjct: 90  TTPVVT-VDVESIESALERIESLGGKTVTGRTPV-GNMGFAAYFTDSEGNVVGLWETA 145

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 41.8 bits (98), Expect = 4e-05
 Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 241 TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
               +    +   D DRA  FY+ AFG   + +  + DY
Sbjct: 22  MTGRIVHFEIPFDDGDRARAFYRDAFGWA-IAEIPDMDY 59

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 85.7 bits (212), Expect = 6e-21
 Identities = 28/128 (21%), Positives = 47/128 (36%), Gaps = 12/128 (9%)

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV 175
           + +    G LD+ I+FY E L +K + +     + Y     G     + + +E T   G 
Sbjct: 13  IRIARPTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGLP--HADYHLEFTQYEGG 69

Query: 176 DKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGP--VKGGNTVIAFIEDPDG 230
               +          V    ++A     +K  G +      P    GG T    IEDPDG
Sbjct: 70  STAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVT----IEDPDG 125

Query: 231 YKFELLER 238
           ++   +  
Sbjct: 126 WRIVFMNS 133

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 81.0 bits (200), Expect = 2e-19
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 12/123 (9%)

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV 175
           + V   VG  ++   FY E +GM+ + K +  + R    +   G ++ H  VE  +N   
Sbjct: 14  VQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGG-CWFKCGNQEIHIGVEQNFNPA- 71

Query: 176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
                     H    V  + +    +  +G +V  +            ++ DP G + E 
Sbjct: 72  -------KRAHPAFYVLKIDEFKQELIKQGIEVIDDH-ARPDVIRF--YVSDPFGNRIEF 121

Query: 236 LER 238
           +E 
Sbjct: 122 MEN 124

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 80.4 bits (199), Expect = 5e-19
 Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 19/127 (14%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + +  V  +V +L+K+ +FYTE LG +          R+   ++  G      + E   N
Sbjct: 27  KGLFEVAVKVKNLEKSSQFYTEILGFEAGLL--DSARRWNFLWVS-GRAGMVVLQEEKEN 83

Query: 173 YGVDKYDIGTGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIA--FIEDP 228
           +            HF   VE  ++      +++KG  V    GPV          +  DP
Sbjct: 84  WQQQ---------HFSFRVEKSEIEPLKKALESKGVSVH---GPVNQEWMQAVSLYFADP 131

Query: 229 DGYKFEL 235
           +G+  E 
Sbjct: 132 NGHALEF 138

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 40.7 bits (96), Expect = 8e-05
 Identities = 7/32 (21%), Positives = 15/32 (46%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
           V ++V +L+++  FY +  G E         +
Sbjct: 32  VAVKVKNLEKSSQFYTEILGFEAGLLDSARRW 63

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 78.4 bits (193), Expect = 3e-18
 Identities = 23/126 (18%), Positives = 41/126 (32%), Gaps = 12/126 (9%)

Query: 115 ML----HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTN-AFLGYGPEDSHFVVEL 169
           M+    H+ + V DL++  +        + +   D  +   +   F   G       + +
Sbjct: 1   MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWV 54

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
               G    +       F I   D  +  + V   G  +      V+G    I F  D D
Sbjct: 55  AIMQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYF-YDDD 113

Query: 230 GYKFEL 235
            + FEL
Sbjct: 114 NHMFEL 119

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 44.9 bits (106), Expect = 3e-06
 Identities = 6/33 (18%), Positives = 11/33 (33%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           +   V DL+R     +  F    +   D   + 
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYASDTEQFS 40

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 78.0 bits (192), Expect = 5e-18
 Identities = 29/131 (22%), Positives = 44/131 (33%), Gaps = 13/131 (9%)

Query: 113 RRML-HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 171
           + ML HV   V  L+++I F+   LG                    Y    ++ V   T 
Sbjct: 18  QGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKHGKTYLVFVQTE 72

Query: 172 NYGVD--KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPG--PVKGGNTVIAF 224
           +       +   TG  H        E V +    +K +G  +  E       G N    F
Sbjct: 73  DRFQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVF 132

Query: 225 IEDPDGYKFEL 235
            EDP+  K E+
Sbjct: 133 CEDPNRIKVEI 143

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 6/32 (18%), Positives = 11/32 (34%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
           V + V  L+ +I F+    G        +   
Sbjct: 24  VEINVDHLEESIAFWDWLLGELGYEDYQSWSR 55

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 78.1 bits (192), Expect = 5e-18
 Identities = 26/125 (20%), Positives = 41/125 (32%), Gaps = 8/125 (6%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R+ H+V  V D+  TI+FY E LG   +  +           L +G +  +   +    
Sbjct: 22  DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEF 75

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA--FIEDPDG 230
                           I    +   V  +   G  +   P    G    I   +I DPDG
Sbjct: 76  EPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

Query: 231 YKFEL 235
              E+
Sbjct: 136 NLIEI 140

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 8/32 (25%), Positives = 15/32 (46%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
           ++L V D+   I FY++  G   +  + N   
Sbjct: 27  LVLTVSDISTTIRFYEEVLGFSAVTFKQNRKA 58

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 76.7 bits (189), Expect = 7e-18
 Identities = 26/126 (20%), Positives = 40/126 (31%), Gaps = 19/126 (15%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
            + H+   V D+    +F  +  G+              NAF      D  F++ L    
Sbjct: 3   GIKHLNLTVADVVAAREFLEKYFGLTC-------SGTRGNAFAVMRDND-GFILTLMKGK 54

Query: 174 GVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
            V          H G      E V K    +K  G     EP       T   ++E P G
Sbjct: 55  EVQY----PKTFHVGFPQESEEQVDKINQRLKEDG--FLVEPPKHAHAYTF--YVEAPGG 106

Query: 231 YKFELL 236
           +  E++
Sbjct: 107 FTIEVM 112

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 41.6 bits (98), Expect = 2e-05
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNP 277
           + L V D+  A  F +K FG+     R N 
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNA 36

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 75.1 bits (185), Expect = 4e-17
 Identities = 27/127 (21%), Positives = 41/127 (32%), Gaps = 8/127 (6%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           HV   V DLD + ++YTE L  K L +     D  + A        S  + E        
Sbjct: 8   HVSLTVRDLDISCRWYTEILDWKELVRGR--GDTTSFAHGVLPGGLSIVLREHDGGGTDL 65

Query: 177 KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
             +   G  H   +V    D+    + +   G      P        ++AF  D D    
Sbjct: 66  FDETRPGLDHLSFSVESMTDLDVLEERLAKAG--AAFTPTQELPFGWILAF-RDADNIAL 122

Query: 234 ELLERGP 240
           E +    
Sbjct: 123 EAMLGRE 129

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 8/32 (25%), Positives = 13/32 (40%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
           V L V DLD +  +Y +    + L +      
Sbjct: 9   VSLTVRDLDISCRWYTEILDWKELVRGRGDTT 40

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 73.7 bits (181), Expect = 2e-16
 Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 11/123 (8%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + + H+   V DL K++ F+ E LG+ L  + +      T A+L  G        +    
Sbjct: 3   QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQ 56

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             V   +       F +A ED       ++  G  VT        G +   +  DPDG+K
Sbjct: 57  -YVPPQESDYTHYAFTVAEEDFEPLSQRLEQAG--VTIWKQNKSEGASF--YFLDPDGHK 111

Query: 233 FEL 235
            EL
Sbjct: 112 LEL 114

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 38.6 bits (90), Expect = 5e-04
 Identities = 7/29 (24%), Positives = 16/29 (55%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDN 276
           + L V DL +++ F+ +  G+ L  + + 
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNT 36

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 77.0 bits (189), Expect = 3e-16
 Identities = 31/184 (16%), Positives = 56/184 (30%), Gaps = 28/184 (15%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY--G 174
           H+     + ++   FY   LG++ ++     +D      L YG +      EL++     
Sbjct: 33  HISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMY-HLFYGDKTGSPGTELSFFEIPL 91

Query: 175 VDKYDIGTG-FGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
           V +   GT      G+ V          +  +     V             + F ED +G
Sbjct: 92  VGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFD--VKHSEMTTYANRPALQF-EDAEG 148

Query: 231 YKFELLERGPTPEPLCQ------------------VMLRVGDLDRAINFYKKAFGMELLR 272
            +  LL          +                  V L V  LD+  +   + FG   + 
Sbjct: 149 LRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVS 208

Query: 273 KRDN 276
           + D 
Sbjct: 209 RNDQ 212

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 72.5 bits (178), Expect = 4e-16
 Identities = 24/126 (19%), Positives = 41/126 (32%), Gaps = 12/126 (9%)

Query: 115 ML----HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVEL 169
           M+    H+   V DL+KT  F       + +              F           + +
Sbjct: 1   MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAG------LWI 54

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
               G    +       F I  E+V +  + +KA G ++ +   P   G     +  D D
Sbjct: 55  CIMEGDSLQERTYNHIAFQIQSEEVDEYTERIKALGVEM-KPERPRVQGEGRSIYFYDFD 113

Query: 230 GYKFEL 235
            + FEL
Sbjct: 114 NHLFEL 119

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 7/32 (21%), Positives = 14/32 (43%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
           + L V DL++   F +  F  E +    +  +
Sbjct: 8   ITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTF 39

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 75.6 bits (186), Expect = 6e-16
 Identities = 37/184 (20%), Positives = 62/184 (33%), Gaps = 39/184 (21%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R  HV  RV D+ K ++ Y E LG+  + + D  + R    +L    E   F + L   
Sbjct: 6   MRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QGR---VYLKAWTEVDKFSLVLR-- 58

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREP-GPVKGGNTVIAFIEDP 228
               + D   G    G  V   + + +    + A G  V + P G +      + F + P
Sbjct: 59  ----EAD-EPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRF-QAP 112

Query: 229 DGYKFEL----------------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAF 266
            G+ FEL                        +G         ++   +L    + + K  
Sbjct: 113 SGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVL 172

Query: 267 GMEL 270
           G  L
Sbjct: 173 GFYL 176

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 55.2 bits (133), Expect = 5e-09
 Identities = 22/129 (17%), Positives = 38/129 (29%), Gaps = 17/129 (13%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI---PEDRYTNAFLGYGPEDSHFVVEL 169
            R  H +    +L  T   +T+ LG  L    +            FL      +H V   
Sbjct: 149 VRFDHALMYGDELPATYDLFTKVLGFYL---AEQVLDENGTRVAQFLSLST-KAHDVA-- 202

Query: 170 TYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIE 226
                   +       H    +   ED+ +  DL+      +   P      +    +  
Sbjct: 203 -----FIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFF 257

Query: 227 DPDGYKFEL 235
           DP G + E+
Sbjct: 258 DPSGNRNEV 266

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 71.6 bits (175), Expect = 1e-15
 Identities = 25/126 (19%), Positives = 53/126 (42%), Gaps = 9/126 (7%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE-LTY 171
           +++  +   +GDL+ + +FY E  G        +  +     +   G   + ++V+ L  
Sbjct: 4   QQVAVITLGIGDLEASARFYGEGFGWAP-----VFRNPEIIFYQMNGFVLATWLVQNLQE 58

Query: 172 NYGVDKYDIGTGF--GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
           + GV            H   A  +VA  ++ + A GG++ R          +  ++ DPD
Sbjct: 59  DVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAP-PHGGLRGYVADPD 117

Query: 230 GYKFEL 235
           G+ +E+
Sbjct: 118 GHIWEI 123

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 41.2 bits (96), Expect = 8e-05
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
           + L +GDL+ +  FY + FG   + +     +
Sbjct: 9   ITLGIGDLEASARFYGEGFGWAPVFRNPEIIF 40

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 71.6 bits (175), Expect = 1e-15
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 14/134 (10%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFL--GYGPEDSHFVVELTYNYG 174
           HV Y   D D+  K+Y E  G   L + + PE       +       +    V++     
Sbjct: 12  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 71

Query: 175 --------VDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG-GNTVIAFI 225
                   + K++   G  H    V+D+      ++ +G ++  +  P  G G   I F+
Sbjct: 72  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE-PKLGTGGNRINFM 130

Query: 226 --EDPDGYKFELLE 237
             +   G   EL +
Sbjct: 131 HPKSGKGVLIELTQ 144

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 39.3 bits (91), Expect = 3e-04
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKV 281
            V     D D A  +Y++ FG   L + +NP+  V
Sbjct: 12  HVAYACPDADEASKYYQETFGWHELHREENPEQGV 46

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 71.1 bits (174), Expect = 2e-15
 Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 7/125 (5%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R ++ +  V D++++  FY + LG+K+L         +     G+   +   + E  +  
Sbjct: 8   RFVNPIPFVRDINRSKSFYRDRLGLKILED----FGSFVLFETGFAIHEGRSLEETIWRT 63

Query: 174 GVDKYDI-GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             D  +  G           DV      +     ++         G  V     DPDG+ 
Sbjct: 64  SSDAQEAYGRRNMLLYFEHADVDAAFQDIA-PHVELIHPLERQAWGQRVF-RFYDPDGHA 121

Query: 233 FELLE 237
            E+ E
Sbjct: 122 IEVGE 126

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 41.4 bits (97), Expect = 6e-05
 Identities = 8/35 (22%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
               +  V D++R+ +FY+   G+++L   D   +
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKIL--EDFGSF 41

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 71.1 bits (174), Expect = 2e-15
 Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 12/129 (9%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYT---NAFLGYGPEDSHFVVEL 169
             + +V     D+     FY +  G + +     P  R      + +G+   +++ +++L
Sbjct: 7   ADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQL 66

Query: 170 TYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIE 226
                    +           V   E V K V +  A G  + + P      +   A + 
Sbjct: 67  A-----QFSETSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYET-YYHWYQAVLL 120

Query: 227 DPDGYKFEL 235
           DP+   F +
Sbjct: 121 DPERNVFRI 129

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 39.9 bits (93), Expect = 2e-04
 Identities = 7/33 (21%), Positives = 16/33 (48%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           V +   D+     FY++ FG + +    +P ++
Sbjct: 12  VNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFR 44

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 70.4 bits (172), Expect = 2e-15
 Identities = 26/125 (20%), Positives = 41/125 (32%), Gaps = 12/125 (9%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
            +  +      L   + FY   +G +    +         A              L Y+ 
Sbjct: 6   LITSITINTSHLQGMLGFY-RIIGFQFTASKVDKGSEVHRAVHN------GVEFSL-YSI 57

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTV-DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
              +          G  + D+ KTV +LVK  G     +P  +  G    A + DPDG+ 
Sbjct: 58  QNPQRSQIPSL-QLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKK--AIVLDPDGHS 114

Query: 233 FELLE 237
            EL E
Sbjct: 115 IELCE 119

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 69.4 bits (170), Expect = 5e-15
 Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 14/123 (11%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             + H+   V DL  +I FY + LG +L  + D        A+L  G        E  Y 
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQYG 56

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
                Y        FGIA  D A+    ++A G  V         G++   +  DPDG++
Sbjct: 57  GPAADYT----HYAFGIAAADFARFAAQLRAHG--VREWKQNRSEGDSF--YFLDPDGHR 108

Query: 233 FEL 235
            E 
Sbjct: 109 LEA 111

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
           + L V DL  +I FY+   G  L  + D   Y
Sbjct: 8   LTLAVADLPASIAFYRDLLGFRLEARWDQGAY 39

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 73.1 bits (179), Expect = 6e-15
 Identities = 24/185 (12%), Positives = 54/185 (29%), Gaps = 42/185 (22%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             +           +T+ F+T+ LGM +  +         + +L    +   + +++T  
Sbjct: 10  AHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKIT-- 61

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
                     G GH  +     E + +    +       T        G T     + PD
Sbjct: 62  -----EAPEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTF--EYQSPD 114

Query: 230 GYKFELL------------------------ERGPTPEPLCQVMLRVGDLDRAINFYKKA 265
           G+  +LL                         +G   + +  + L   D+    + +++ 
Sbjct: 115 GHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTAVKDSFERH 174

Query: 266 FGMEL 270
            G   
Sbjct: 175 LGFRT 179

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 69.0 bits (168), Expect = 8e-15
 Identities = 27/129 (20%), Positives = 39/129 (30%), Gaps = 11/129 (8%)

Query: 110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVEL 169
            +   + H+     DLD+   FY   LG KL R+     DR T  F G        V  L
Sbjct: 5   RNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARR---YPDRITLDFFGD-----QLVCHL 56

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP---GPVKGGNTVIAFIE 226
           +  +  +       FG      +       L K +G     +               F+ 
Sbjct: 57  SDRWDREVSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLI 116

Query: 227 DPDGYKFEL 235
           DP     E 
Sbjct: 117 DPSNNLLEF 125

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 71.0 bits (174), Expect = 2e-14
 Identities = 40/184 (21%), Positives = 59/184 (32%), Gaps = 39/184 (21%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R  H   RV +L++ I FY   LG+     RD     Y   F  +   D    +     
Sbjct: 7   LRPGHAQVRVLNLEEGIHFYRNVLGLVET-GRDDQGRVY---FKCWDERDHSCYI----- 57

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREP-GPVKGGNTVIAFIEDP 228
             + + D   G   FG  V     + K    ++A G   TR P G +      + F E P
Sbjct: 58  --IREAD-TAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF-ELP 113

Query: 229 DGYKFEL----------------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAF 266
            G+  EL                       E G  P  L   +L   ++      + +  
Sbjct: 114 SGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEVL 173

Query: 267 GMEL 270
           G  L
Sbjct: 174 GFYL 177

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 52.9 bits (127), Expect = 3e-08
 Identities = 23/129 (17%), Positives = 39/129 (30%), Gaps = 16/129 (12%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKL-LRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 171
            ++ H +    ++ +  K +TE LG  L  R      D     +L    +          
Sbjct: 150 IQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFV--- 206

Query: 172 NYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPG--PVKGGNTVIAFIE 226
                +Y       H    +   E V +  D++      V   P    V        +  
Sbjct: 207 -----EYPEKGKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGV--TRGCTIYAW 259

Query: 227 DPDGYKFEL 235
           DP G +FE 
Sbjct: 260 DPSGNRFET 268

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 71.1 bits (174), Expect = 3e-14
 Identities = 39/176 (22%), Positives = 61/176 (34%), Gaps = 33/176 (18%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFL-GYGPEDSHFVVELTY 171
             + +V Y V D D    FY +  G++ + +         NA+    G  D H VV+L  
Sbjct: 7   TEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQG-ADEHHVVQLR- 58

Query: 172 NYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIE 226
                + D         +A     DV      V+A G KV  EP  +   GG     F  
Sbjct: 59  -----RAD-ENRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRF-F 111

Query: 227 DPDGYKFEL------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMEL 270
            PDG  FE+                  P  +  ++L   +    + F+    G ++
Sbjct: 112 SPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKV 167

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 70.1 bits (171), Expect = 7e-14
 Identities = 36/177 (20%), Positives = 55/177 (31%), Gaps = 34/177 (19%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R  +    V DL K+  FY + LG+ +  + +         +L    E  H  + LT  
Sbjct: 16  LRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLT-- 67

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTR-EPGPVKGGNTVIAFIEDP 228
               K             V   EDV K     +  G +  R + G VKG    +   EDP
Sbjct: 68  ----KGP-VAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRV-EDP 121

Query: 229 DGYKFEL---------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMEL 270
            G+ +E                L        L        D+ R   + +   G  +
Sbjct: 122 LGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRV 177

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 43.1 bits (101), Expect = 6e-05
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 15/128 (11%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R+ H      D+ +  K+  E LG ++       E     A++       H       N
Sbjct: 151 VRLDHFNQVTPDVPRGRKYL-EDLGFRVTEDIQDDEGTTYAAWMHRKG-TVHDTALTGGN 208

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--ED 227
                   G    H   +     ++ +  D + A       E GP + G +   ++   D
Sbjct: 209 --------GPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILD 260

Query: 228 PDGYKFEL 235
           PD ++ E+
Sbjct: 261 PDNHRIEI 268

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 68.1 bits (166), Expect = 1e-13
 Identities = 28/182 (15%), Positives = 55/182 (30%), Gaps = 28/182 (15%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             +  +     +LD+ + FYT  LG + + ++           +  G   S        +
Sbjct: 25  TSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLG--VSQIQFRAAAD 76

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA---FIEDPD 229
                Y I        IA     +    +   G  +T             A   ++EDP 
Sbjct: 77  GTKPFYHIA-----INIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVEDPS 131

Query: 230 GYKFELLERGPTPEP------------LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP 277
           G   EL+ R                  + ++ +   D+++A    K+A     L + +  
Sbjct: 132 GNIIELISRQQAAPVLDKPFSADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQIEPA 191

Query: 278 DY 279
             
Sbjct: 192 GL 193

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 68.8 bits (168), Expect = 2e-13
 Identities = 31/177 (17%), Positives = 52/177 (29%), Gaps = 34/177 (19%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R  ++   V DL K+ +FY + LG+ +  + +         +L    E  H  + L   
Sbjct: 16  VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLR-- 67

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGP-VKGGNTVIAFIEDP 228
               +         F   V    +V       K  G +  R      KG    +   EDP
Sbjct: 68  ----QGP-IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRV-EDP 121

Query: 229 DGYKFEL---------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMEL 270
            G+ +E                L        L        D+ R   +  +  G  +
Sbjct: 122 LGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHFNQVTPDVPRGRAYL-EDLGFRV 177

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 47.3 bits (112), Expect = 3e-06
 Identities = 23/131 (17%), Positives = 44/131 (33%), Gaps = 21/131 (16%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI---PEDRYTNAFLGYGPEDSHFVVEL 169
            R+ H      D+ +   +  E LG ++    +     +     A++       H     
Sbjct: 151 VRLDHFNQVTPDVPRGRAYL-EDLGFRV---SEDIKDSDGVTYAAWMHRKQ-TVHDTALT 205

Query: 170 TYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI- 225
             N        G    H   A     ++ +  D + A       E GP + G +   ++ 
Sbjct: 206 GGN--------GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLY 257

Query: 226 -EDPDGYKFEL 235
             DPDG++ E+
Sbjct: 258 ILDPDGHRIEI 268

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 67.8 bits (165), Expect = 4e-13
 Identities = 28/182 (15%), Positives = 54/182 (29%), Gaps = 23/182 (12%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAF---LGYGPEDSHFVVELTYNY 173
           H+   VG   +   FY   LG++L+++    +D  T         G   +          
Sbjct: 11  HITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGA 70

Query: 174 GVDKYDIGT-GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
                  G  G   + +    +A     ++      T      + G   + F +DP G  
Sbjct: 71  RQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYT---KIERFGEQYVEF-DDPHGLH 126

Query: 233 FELLERG---PTPEPLCQ------------VMLRVGDLDRAINFYKKAFGMELLRKRDNP 277
            E++ER           +              L     D+  +  +   G+E + K  + 
Sbjct: 127 LEIVEREEGEANTWTFGEVTPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEGDF 186

Query: 278 DY 279
             
Sbjct: 187 VR 188

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 51.3 bits (122), Expect = 1e-07
 Identities = 23/188 (12%), Positives = 44/188 (23%), Gaps = 17/188 (9%)

Query: 56  LFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRM 115
           L +      +   FG + ++     G  +E          + T  E           +  
Sbjct: 99  LEKFNVPYTKIERFGEQYVEFDDPHGLHLEIVEREEGEANTWTFGEVTP----DVAIKGF 154

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV 175
                     DKT       +G++ + K                 +  + +       G 
Sbjct: 155 GGATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDIGNVIDLKLTPIGR 208

Query: 176 DKYDIGTGFGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
            +   GT   H      D          + + G  VT              +  +     
Sbjct: 209 GQMGAGT-VHHIAWRANDDEDQLDWQRYIASHGYGVT---PVRDRNYFNAIYFREHGEIL 264

Query: 233 FELLERGP 240
           FE+    P
Sbjct: 265 FEIATDPP 272

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 67.2 bits (164), Expect = 4e-13
 Identities = 34/196 (17%), Positives = 59/196 (30%), Gaps = 43/196 (21%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           R + ++ + V D+     F T+ LG+      D               +   + + +   
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRI--DSRAWRIAVQ-- 52

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGP---VKGGNTVIAFIE 226
                          G  V     +A+  D +K  G  VT         +G   +I F  
Sbjct: 53  -----QGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITF-A 106

Query: 227 DPDGYKFEL------------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAFGM 268
           DP G   E+                         + L   +  V D D+A+ FY    G 
Sbjct: 107 DPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFYTDVLGF 166

Query: 269 ---ELLRKRDNPDYKV 281
              +++  +  PD  V
Sbjct: 167 QLSDVIDMKMGPDVTV 182

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3 Length = 418

 Score = 67.7 bits (164), Expect = 5e-13
 Identities = 31/200 (15%), Positives = 53/200 (26%), Gaps = 38/200 (19%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           HV     D       ++  LG  L  + D+      +A L        F+    Y +G D
Sbjct: 34  HVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGAD 93

Query: 177 KYDI-----------------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG-- 217
                                G       + V D         A G +    P  +    
Sbjct: 94  AATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGF 153

Query: 218 --------GNTVIAFIEDPDGY-------KFELLERGPTPEP----LCQVMLRVGDLDRA 258
                   G+ V+ ++  PDG         FE +      +        ++  V +L  A
Sbjct: 154 RLAEVELYGDVVLRYVSYPDGAAGEPFLPGFEGVASPGAADYGLSRFDHIVGNVPELAPA 213

Query: 259 INFYKKAFGMELLRKRDNPD 278
             ++    G     +    D
Sbjct: 214 AAYFAGFTGFHEFAEFTTED 233

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 63.9 bits (155), Expect = 7e-13
 Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 8/125 (6%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           RR+ H+V  V  +  T  FY++ LGM+++  ++          L +G +  +        
Sbjct: 26  RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFGDQKFNLHEVGKEF 79

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDG 230
                + +        I    + + +  +KA    +   P P  G  G  +  +  DPD 
Sbjct: 80  EPKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDR 139

Query: 231 YKFEL 235
              E+
Sbjct: 140 NLIEV 144

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 63.0 bits (153), Expect = 1e-12
 Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 10/126 (7%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             + H+V  V D+  T  FY + LGMK +              L +G +  +   +L   
Sbjct: 9   SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFGHQKINL-HQLGNE 61

Query: 173 YGVDKYDIGTGFGHF-GIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA--FIEDPD 229
           +     ++  G      I    ++  +  V+ +G  +   P    G    I   +  DPD
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 230 GYKFEL 235
           G   E+
Sbjct: 122 GNLIEV 127

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 62.9 bits (153), Expect = 1e-12
 Identities = 22/125 (17%), Positives = 38/125 (30%), Gaps = 6/125 (4%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
              D D+ + +     G +LL ++        +A L  G      +V  T          
Sbjct: 9   AYTDPDRAVDWLVRVFGFRLLLRQP-AIGTIRHADLDTG--GGIVMVRRTGEPYTVSCAG 65

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE--R 238
           G       + V DV +      A G  + +       G      + D +G+ +E     R
Sbjct: 66  GHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQ-YLVRDLEGHLWEFTRHLR 124

Query: 239 GPTPE 243
              P 
Sbjct: 125 DVPPR 129

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 40.9 bits (96), Expect = 7e-05
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPD 278
           V L   D DRA+++  + FG  LL ++    
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIG 36

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 60.5 bits (147), Expect = 6e-12
 Identities = 22/116 (18%), Positives = 35/116 (30%), Gaps = 13/116 (11%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
              +  +   FY + LGM +        D          P ++H  V      G      
Sbjct: 14  ATPEPARAQAFYGDILGMPVAM------DHGWIVTHA-SPLEAHAQVSFAREGGS----- 61

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 236
           GT      I V++  +    +   G  +   P     G     F+ DP G    +L
Sbjct: 62  GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLINIL 116

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 7/31 (22%), Positives = 11/31 (35%), Gaps = 2/31 (6%)

Query: 249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
            +   +  RA  FY    GM +    D+   
Sbjct: 12  NIATPEPARAQAFYGDILGMPVA--MDHGWI 40

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 61.0 bits (148), Expect = 6e-12
 Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 10/134 (7%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGP----EDSHFVVEL 169
           R+      V D+ K+++FY + LG+++    +     +T A L  G     +    V   
Sbjct: 4   RISLFAVVVEDMAKSLEFYRK-LGVEI--PAEADSAPHTEAVLDGGIRLAWDTVETVRSY 60

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
              +                    V K    +   G +   +P     G    A ++DPD
Sbjct: 61  DPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPD 119

Query: 230 GYKFELLERGPTPE 243
           G   +L    P P 
Sbjct: 120 GNVVDLFA--PLPL 131

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 61.9 bits (150), Expect = 3e-11
 Identities = 28/180 (15%), Positives = 53/180 (29%), Gaps = 37/180 (20%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           R + ++     D+    ++  + LGM   +     E      +L      +  VV     
Sbjct: 4   RSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP--EGA---LYLRMDDFPARLVVV---- 54

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPG---PVKGGNTVIAFIE 226
                          G      E + +  + +  +G             +  + +I F  
Sbjct: 55  -----PGEHDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRF-A 108

Query: 227 DPDGYKFEL-------LERGPTPEP---------LCQVMLRVGDLDRAINFYKKAFGMEL 270
           DP G   E+         R  +P           +  V+L   D   A++FY+   G  L
Sbjct: 109 DPSGNCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRL 168

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 51.5 bits (123), Expect = 7e-08
 Identities = 23/182 (12%), Positives = 50/182 (27%), Gaps = 25/182 (13%)

Query: 67  HFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLD 126
                + ++     G+ +E      +                 + ++ M HVV    D  
Sbjct: 98  DRRVDEMIRFADPSGNCLEVFHGTALEHRRVV---SPYGHRFVTGEQGMGHVVLSTRDDA 154

Query: 127 KTIKFYTECLGMKL--------LRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY 178
           + + FY + LG +L               +               H +            
Sbjct: 155 EALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSL-------AFLPM 207

Query: 179 DIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPG--PVKGGNTVIAFIEDPDGYKF 233
              +G  H  + V   +DV   +D    +   ++   G         +  +++ P G+  
Sbjct: 208 PTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVN--DLMLSFYMKTPGGFDI 265

Query: 234 EL 235
           E 
Sbjct: 266 EF 267

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 59.1 bits (143), Expect = 5e-11
 Identities = 27/144 (18%), Positives = 55/144 (38%), Gaps = 23/144 (15%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           R  + +   V D++++++ Y E  G++  +     +    +      P  +   +   + 
Sbjct: 18  RNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAF-FE 76

Query: 173 YGVDKYDI-----------------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPV 215
            G  + ++                 G G  H    V+D+ + V+ +  KG KV ++ G  
Sbjct: 77  LGPLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQK-GDF 135

Query: 216 KGGNTVIAFI--EDPDGYKFELLE 237
           +GG    A+I          ELLE
Sbjct: 136 EGGR--YAYIDTLRALKVMIELLE 157

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 58.9 bits (142), Expect = 3e-10
 Identities = 25/181 (13%), Positives = 54/181 (29%), Gaps = 38/181 (20%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R+ ++ + V D+     F T+ +G+               A      +   + + +   
Sbjct: 3   ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRA--DQRAWRIAVQ-- 52

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--ED 227
                        + G+ V     + +  D ++  G   TR    +     V+  +  +D
Sbjct: 53  -----PGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQD 107

Query: 228 PDGYKFEL------------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAFGME 269
           P G   E+                         + +   +  V D  +A+ FY +  G  
Sbjct: 108 PFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAKAMAFYTEVLGFV 167

Query: 270 L 270
           L
Sbjct: 168 L 168

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 51.5 bits (123), Expect = 9e-08
 Identities = 35/187 (18%), Positives = 55/187 (29%), Gaps = 21/187 (11%)

Query: 69  FGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKT 128
                L L    G  +E    G              +    +  + + H V  V D  K 
Sbjct: 98  KVMGLLCLQDPFGLPLEIYY-GPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAKA 156

Query: 129 IKFYTECLGMKL---LRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG 185
           + FYTE LG  L   +  +  PE      FL       H +        +  + I     
Sbjct: 157 MAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNG-RHHTIA-------LAAFPIPKRIH 208

Query: 186 HFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG--- 239
           HF +     +DV    D + A  G++T   G      T+  + + P          G   
Sbjct: 209 HFMLQANTIDDVGYAFDRLDAA-GRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGPRT 267

Query: 240 --PTPEP 244
              +   
Sbjct: 268 VDSSWTV 274

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 55.6 bits (134), Expect = 3e-10
 Identities = 19/126 (15%), Positives = 34/126 (26%), Gaps = 14/126 (11%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRK-RDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            +  +   V ++ +        L  K         +    +  L      +H V    + 
Sbjct: 5   NLNQLDIIVSNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLS--QNHLVPLENFQ 62

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
            G+             I VEDV +    +   G KV   P     G      ++ P G  
Sbjct: 63  SGI----------IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLV 111

Query: 233 FELLER 238
            +    
Sbjct: 112 LDFYRM 117

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 39.8 bits (93), Expect = 1e-04
 Identities = 4/35 (11%), Positives = 12/35 (34%), Gaps = 2/35 (5%)

Query: 245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
           L Q+ + V ++ +     +     +      N  +
Sbjct: 6   LNQLDIIVSNVPQVCADLEHILDKKA--DYANDGF 38

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 58.5 bits (141), Expect = 4e-10
 Identities = 23/181 (12%), Positives = 53/181 (29%), Gaps = 40/181 (22%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             + ++   V +LD    +    +GM++     + +      +L       H  + L   
Sbjct: 5   TELGYLGLSVSNLDAWRDYAAGIMGMQV-----VDDGEDDRIYLRMD--RWHHRIVLH-- 55

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTR---EPGPVKGGNTVIAFIE 226
                 D      + G  V    ++ +  + +K  G             +    ++    
Sbjct: 56  -----ADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKL-H 109

Query: 227 DPDGYKFELL-------------------ERGPTPEPLCQVMLRVGDLDRAINFYKKAFG 267
           DP G   E+                    +     + L  +++R  D++ A  FY+    
Sbjct: 110 DPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGHIIIREDDVEEATRFYRLLGL 169

Query: 268 M 268
            
Sbjct: 170 E 170

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 51.1 bits (122), Expect = 1e-07
 Identities = 25/186 (13%), Positives = 60/186 (32%), Gaps = 17/186 (9%)

Query: 57  FQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRML 116
           F++ +    +       +KL    G+  E      +  +S     + +     ++ + + 
Sbjct: 89  FEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLG 148

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTN--AFLGYGPEDSHFVVELTYNYG 174
           H++ R  D+++  +FY        +  +    +       F+       H +        
Sbjct: 149 HIIIREDDVEEATRFYRLLGLEGAVEYKFALPNGAVGTPVFMHCND-RHHSLA------- 200

Query: 175 VDKYDIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPG--PVKGGNTVIAFIEDPD 229
                +     H  I      D+    DLV+ +   VT + G         +  +  +P 
Sbjct: 201 FGVGPMDKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSN--DEALTFYCANPS 258

Query: 230 GYKFEL 235
           G+ +E 
Sbjct: 259 GWLWEP 264

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 58.1 bits (140), Expect = 5e-10
 Identities = 27/179 (15%), Positives = 56/179 (31%), Gaps = 40/179 (22%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             + ++   V D D    F T+ LG+++L + +  +DR    +L    +  H  + +   
Sbjct: 8   IELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--KDR---FYLRM--DYWHHRIVVH-- 58

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTR---EPGPVKGGNTVIAFIE 226
                ++      + G  V    +       +   G K+          +    ++   E
Sbjct: 59  -----HNGQDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKT-E 112

Query: 227 DPDGYKFEL-------------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAF 266
           DP G   E+                    +     + L   ++R  D+  A  FY    
Sbjct: 113 DPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQGLGHCIVRQTDVAEAHKFYSLLG 171

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 45.4 bits (107), Expect = 9e-06
 Identities = 26/188 (13%), Positives = 49/188 (26%), Gaps = 21/188 (11%)

Query: 57  FQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDW-VKSDKRRM 115
            ++   +          +K     G+  E    G     SN       L     +  + +
Sbjct: 92  IRICDKVEAQERMVLGLMKTEDPGGNPTEIFW-GPRIDMSNPFHPGRPLHGKFVTGDQGL 150

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKL---LRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            H + R  D+ +  KFY+  LG +     R           +F+       H +      
Sbjct: 151 GHCIVRQTDVAEAHKFYSL-LGFRGDVEYRIPLPNGMTAELSFMHCNA-RDHSIA----- 203

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPG--PVKGGNTVIAFIED 227
                        H  +     ED+  T          +  + G         +  +   
Sbjct: 204 --FGAMPAAKRLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHAN--DKALTFYGAT 259

Query: 228 PDGYKFEL 235
           P G+  E 
Sbjct: 260 PSGWLIEP 267

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 54.0 bits (129), Expect = 3e-09
 Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 15/133 (11%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
            V++ V +  K+ +FY   L  + +         +    +  G       + L     ++
Sbjct: 9   LVLFYVKNPAKSEEFYKNLLDTQPIES----SPTFAMFVMKTG-----LRLGLWAQEEIE 59

Query: 177 -KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
            K     G       V   E V +       K   + + P  +  G T      DPD ++
Sbjct: 60  PKAHQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYT--FVGVDPDEHR 117

Query: 233 FELLERGPTPEPL 245
             +     T E L
Sbjct: 118 LRIFCLKRTAENL 130

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A* Length = 393

 Score = 56.0 bits (134), Expect = 4e-09
 Identities = 34/196 (17%), Positives = 55/196 (28%), Gaps = 34/196 (17%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN---- 172
            V + VG+  +   FY   +G + L  R +                  FV+    N    
Sbjct: 14  SVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNK 73

Query: 173 -YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPD 229
             G      G G       VED    V   + +G K+ REP   +   G    A ++   
Sbjct: 74  EMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYG 133

Query: 230 GYKFELLERG-----------------PTPEPLCQVMLRV----------GDLDRAINFY 262
                L+E+                  P    L +  L +           ++  A  +Y
Sbjct: 134 DTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEMIDHIVGNQPDQEMVSASEWY 193

Query: 263 KKAFGMELLRKRDNPD 278
            K          D+  
Sbjct: 194 LKNLQFHRFWSVDDTQ 209

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 53.5 bits (128), Expect = 4e-09
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 15/123 (12%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
             +  V +   + +FY   LG+  +         ++   L  G       + L   + V+
Sbjct: 28  FTILYVDNPPASTQFYKALLGVDPVES----SPTFSLFVLANG-----MKLGLWSRHTVE 78

Query: 177 -KYDIGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
            K  +  G G     VE+   V +T    KA G  + ++P  ++ G T      DPD ++
Sbjct: 79  PKASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTF--TAADPDSHR 136

Query: 233 FEL 235
             +
Sbjct: 137 LRV 139

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 48.5 bits (115), Expect = 2e-07
 Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 18/125 (14%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
             +  V +++++  FY      + +        RY               +   ++ G +
Sbjct: 16  LQLVYVSNVERSTDFYRFIFKKEPVFVT----PRYVAFPSSGD------ALFAIWSGGEE 65

Query: 177 KYDIGTGFGHFGIAVEDVA------KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
                  F   GI +                K+    V +EP     G T    I DPDG
Sbjct: 66  PVAEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTF--LISDPDG 123

Query: 231 YKFEL 235
           +   +
Sbjct: 124 HIIRV 128

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.0 bits (121), Expect = 2e-07
 Identities = 44/295 (14%), Positives = 88/295 (29%), Gaps = 89/295 (30%)

Query: 17  TYNKTSLPSQSSLK-LSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALK 75
             +K +   +SSL  L P              +    RL++F   A IP         L 
Sbjct: 351 NCDKLTTIIESSLNVLEP--------AEYRKMF---DRLSVFPPSAHIP------TILLS 393

Query: 76  LLRAEGSTIEASTSGNMAPTSNTVTEQNV----------LDW-VKSDKRRMLHVVYRVGD 124
           L+  +    +     N     + V +Q            L+  VK +    LH       
Sbjct: 394 LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH------- 446

Query: 125 LDKTIKFYTECLGMKLLRKRD------IPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY 178
               +  Y       + +  D         D+Y  + +G+     H          ++  
Sbjct: 447 -RSIVDHY------NIPKTFDSDDLIPPYLDQYFYSHIGH-----HL-------KNIEHP 487

Query: 179 DIGTGFGH-FGIAVEDVAKTVDL--VKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
           +  T F   F          +D   ++    K+  +        +++  ++    YK  +
Sbjct: 488 ERMTLFRMVF----------LDFRFLEQ---KIRHDSTAWNASGSILNTLQQLKFYKPYI 534

Query: 236 LERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPNK 290
            +  P  E L      V  +   ++F  K     L+  +   D  +   L+  ++
Sbjct: 535 CDNDPKYERL------VNAI---LDFLPKI-EENLICSKYT-DL-LRIALMAEDE 577

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 47.5 bits (113), Expect = 3e-07
 Identities = 16/121 (13%), Positives = 30/121 (24%), Gaps = 15/121 (12%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
            + D+ + +  + + LG +L  +          A+L         + E       D    
Sbjct: 14  HIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKIIPD---- 63

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAK----GGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 236
           G       I V D+      +                 +  G      +  PDG      
Sbjct: 64  GIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREF-QVRMPDGDWLNFT 122

Query: 237 E 237
            
Sbjct: 123 A 123

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 47.8 bits (113), Expect = 4e-07
 Identities = 24/127 (18%), Positives = 40/127 (31%), Gaps = 10/127 (7%)

Query: 119 VYRVGDLDKTIKFYTECLGMKL---LRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV 175
           VY   D+DKT+K++ E LG       R  +   D             +H      ++   
Sbjct: 26  VYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFK 85

Query: 176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK--- 232
            +           + +E +      VK  G     +      G    + I   DG     
Sbjct: 86  GE---PIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECS-ITTTDGCILRF 141

Query: 233 FELLERG 239
           FE ++ G
Sbjct: 142 FESIQEG 148

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 46.8 bits (111), Expect = 6e-07
 Identities = 23/128 (17%), Positives = 39/128 (30%), Gaps = 20/128 (15%)

Query: 119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY 178
                D D T  FY   LG  ++ +            L  G     F       +     
Sbjct: 8   NLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEF-------FAHPGL 53

Query: 179 DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGG------NTVIAFIEDPDGYK 232
           D    +    + ++D+A+     K+ G + T    P             +A + DPDG  
Sbjct: 54  DPLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTL 113

Query: 233 FELLERGP 240
             L++   
Sbjct: 114 LRLIQNEL 121

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A Length = 424

 Score = 48.8 bits (115), Expect = 9e-07
 Identities = 35/212 (16%), Positives = 59/212 (27%), Gaps = 47/212 (22%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H+ +  GD     + ++  LGM+   K D+      +A       D  F+    Y+  + 
Sbjct: 28  HIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLS 87

Query: 177 KYDI-----------------------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP- 212
             +I                       G G     I VED      +  A G   +  P 
Sbjct: 88  AGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPI 147

Query: 213 --------GPVKG-GNTVIAFIE-----------DPDGYKFELLERGPTP---EPLCQVM 249
                     VK  G+ V+ ++             P   + E     P       L   +
Sbjct: 148 VLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLPGFERVEDASSFPLDYGIRRLDHAV 207

Query: 250 LRVGDLDRAINFYKKAFGMELLRKRDNPDYKV 281
             V +L  A+ +     G     +    D   
Sbjct: 208 GNVPELGPALTYVAGFTGFHQFAEFTADDVGT 239

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A Length = 166

 Score = 46.2 bits (109), Expect = 2e-06
 Identities = 19/136 (13%), Positives = 32/136 (23%), Gaps = 11/136 (8%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLL-------RKRDIPEDRYTNAFLGYGPEDSHFVVEL 169
            ++     +   + FY    G           RK D       ++ L             
Sbjct: 29  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS 88

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
           +          G+G   F +  +D    V      G                   + DP 
Sbjct: 89  SLPGFSTAKSEGSGV-TFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPF 146

Query: 230 GYKFELLERG--PTPE 243
           G  +   E+    T E
Sbjct: 147 GVTWIFAEKKTVITDE 162

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3 Length = 381

 Score = 44.1 bits (103), Expect = 2e-05
 Identities = 34/196 (17%), Positives = 56/196 (28%), Gaps = 34/196 (17%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
            VV+ VG+  +   +Y+   GM+L+            A        + FV+         
Sbjct: 25  AVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATP 84

Query: 177 KYDI--------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP--GPVKGGNTVIAFIE 226
                       G G     I V D           G +   EP     + G  V+A I 
Sbjct: 85  WGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIA 144

Query: 227 DPDGYKFELLERG--------------PTPEPLCQVMLRV----------GDLDRAINFY 262
                +  L++R               P  EP      +           G ++  + FY
Sbjct: 145 TYGKTRHTLVDRTGYDGPYLPGYVAAAPIVEPPAHRTFQAIDHCVGNVELGRMNEWVGFY 204

Query: 263 KKAFGMELLRKRDNPD 278
            K  G   +++    D
Sbjct: 205 NKVMGFTNMKEFVGDD 220

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 40.2 bits (94), Expect = 9e-05
 Identities = 18/121 (14%), Positives = 30/121 (24%), Gaps = 24/121 (19%)

Query: 119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY 178
           V    D+   + F+ + LG +     D  +  +  A +  G    H           +  
Sbjct: 10  VLTAVDVPANVSFWVDTLGFEK----DFGDRDF--AGVRRGDIRLHI-------SRTEHQ 56

Query: 179 DIGTGFGHFGIAVEDV--------AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
            +      + I V D                    G      G    G      + DP G
Sbjct: 57  IVADNTSAW-IEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREF--AVRDPAG 113

Query: 231 Y 231
            
Sbjct: 114 N 114

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 38.4 bits (89), Expect = 5e-04
 Identities = 16/120 (13%), Positives = 29/120 (24%), Gaps = 8/120 (6%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
              D+ + ++F+T+ LG          ED +  A +                   +    
Sbjct: 12  TARDVAEAVEFWTDRLGFSR----VFVEDDF--AGVVRDDVTLFISAVQDQVVPDNTQAW 65

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP 240
               G   +  E         +   G    E      G      + DP G     +    
Sbjct: 66  VWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREF--ALRDPAGNCVHFVAEEQ 123

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	292
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.92
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.9
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.9
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.89
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.89
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.88
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.87
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.87
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.87
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.86
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.86
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.85
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.85
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.84
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.84
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.84
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.83
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.83
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.82
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.8
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.8
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.8
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.8
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.8
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.8
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.79
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.79
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.79
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.79
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.79
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.78
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.77
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.76
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.76
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.76
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.76
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.76
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.75
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.75
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.75
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.75
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.74
3ghj_A	141	Putative integron gene cassette protein; integron	99.74
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.74
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.73
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.73
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.73
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.73
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.73
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.73
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.73
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.72
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.71
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.71
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.7
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.7
2i7r_A	118	Conserved domain protein; structural genomics cons	99.7
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.7
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.7
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.69
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.69
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.69
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.69
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.68
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.68
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.68
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.68
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.67
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.67
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.67
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.67
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.66
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.66
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.65
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.65
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.65
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.65
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.65
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.64
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.64
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.63
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.62
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.61
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.61
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.59
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.59
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.59
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.58
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.56
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.54
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.5
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.41
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.34
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.31
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.31
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.3
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.24
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.19
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.07
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.05
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.02
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.0
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	98.99
3l20_A	172	Putative uncharacterized protein; hypothetical pro	98.95
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.54
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	98.48
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.32
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	97.97
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	97.94
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	97.91
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	97.87
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	97.86
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	97.75
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	97.72
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	97.69
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	97.66
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	97.65
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	97.64
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	97.59
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	97.52
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	97.52
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	97.51
3ghj_A	141	Putative integron gene cassette protein; integron	97.26
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	97.26
2p25_A	126	Glyoxalase family protein; structural genomics, MC	97.23
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	97.17
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.07
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	97.05
3huh_A	152	Virulence protein STM3117; structural genomics, ny	97.04
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	97.03
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	97.02
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	96.99
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	96.99
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	96.97
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	96.96
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	96.93
1nki_A	135	Probable fosfomycin resistance protein; potassium	96.91
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	96.9
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	96.84
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	96.83
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	96.81
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	96.8
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	96.8
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	96.78
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	96.75
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	96.73
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	96.71
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	96.68
2i7r_A	118	Conserved domain protein; structural genomics cons	96.66
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	96.63
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	96.62
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	96.54
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	96.5
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	96.43
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	96.39
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	96.27
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	96.15
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	95.96
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	95.95
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	95.72
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	95.52
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	94.95
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	94.81
1xy7_A	166	Unknown protein; structural genomics, protein stru	94.16
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	93.38
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	91.48
1tsj_A	139	Conserved hypothetical protein; structural genomic	89.11
3l20_A	172	Putative uncharacterized protein; hypothetical pro	84.06
1k4n_A	192	Protein EC4020, protein YECM; structural genomics,	81.42
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	80.94
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	80.24
3iuz_A	340	Putative glyoxalase superfamily protein; struct ge	80.19

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.92  E-value=7.1e-24  Score=192.27  Aligned_cols=161  Identities=35%  Similarity=0.691  Sum_probs=131.2

Q ss_pred             hhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCC-----------CCceEEEEEeeCCCCceEEEEEEecCCC
Q 022769          107 WVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP-----------EDRYTNAFLGYGPEDSHFVVELTYNYGV  175 (292)
Q Consensus       107 w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~l~~g~~~~~~~l~l~~~~~~  175 (292)
                      |....+++|.|++|.|+|++++++||+++|||++..+...+           ++.+..+++.++....+..+++....+.
T Consensus        20 ~~~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~   99 (330)
T 3zi1_A           20 FQSMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGV   99 (330)
T ss_dssp             GGGCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTC
T ss_pred             eeecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCC
Confidence            44556789999999999999999999999999998766544           4456677888776656677888776554


Q ss_pred             CCCcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC-CCCCceeeeeecCC
Q 022769          176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-TPEPLCQVMLRVGD  254 (292)
Q Consensus       176 ~~~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~-~~~~l~hv~l~v~D  254 (292)
                      .....+.|+.|++|.|+|+   .++++++|+++...+    .+   .+|++||||+.|||++..+ .+.++.|+.|.|.|
T Consensus       100 ~~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~----~~---~~~~~DPdG~~iel~~~~~~~~~~i~hv~L~v~D  169 (330)
T 3zi1_A          100 GDYKLGNDFMGITLASSQA---VSNARKLEWPLTEVA----EG---VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSD  169 (330)
T ss_dssp             CCCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEE----TT---EEEEECTTSCEEEEESSCCTTSCSEEEEEEEESC
T ss_pred             CccccCCCeeEEEEECchH---HHHHHHcCCceeccC----Cc---eEEEECCCCCEEEEEecCCCCCCceeEEEEECCC
Confidence            4455567999999999987   677889999886433    22   5889999999999998763 46789999999999


Q ss_pred             HHHHHHHHHHhcCCEEEeeecCC
Q 022769          255 LDRAINFYKKAFGMELLRKRDNP  277 (292)
Q Consensus       255 ~~~s~~fY~~~lG~~~~~~~~~~  277 (292)
                      ++++.+||+++|||++.....+.
T Consensus       170 l~~a~~FY~~vLG~~~~~~~~~~  192 (330)
T 3zi1_A          170 LQKSLNYWCNLLGMKIYENDEEK  192 (330)
T ss_dssp             HHHHHHHHHHTTCCEEEEEETTT
T ss_pred             HHHHHHHHHHhcCCEEEeeccCC
Confidence            99999999999999999876444

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.90  E-value=4.8e-22  Score=180.58  Aligned_cols=160  Identities=16%  Similarity=0.215  Sum_probs=120.7

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCC-CceEEEEEeeCCCCceEEEEEEecCCCCCCcC-CCceEEEE
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI-GTGFGHFG  188 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~-g~g~~hia  188 (292)
                      .+++|+||+|.|+|++++.+||+++|||++..+....+ .....+++..........+.+......+.... ..++.|++
T Consensus         5 ~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hia   84 (335)
T 3oaj_A            5 KTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVTS   84 (335)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEEEE
Confidence            57899999999999999999999999999987753321 22223444333222223455554332221112 23789999


Q ss_pred             EeeC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC---------------CCCceeeeee
Q 022769          189 IAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------PEPLCQVMLR  251 (292)
Q Consensus       189 ~~V~--Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~---------------~~~l~hv~l~  251 (292)
                      |.|+  |++++.++|+++|+++..    ...++...+||+|||||.|||++..+.               ..+|+||+|.
T Consensus        85 f~V~~~dl~~~~~rL~~~Gv~~~~----~~~~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~v~~~~~i~gl~Hv~L~  160 (335)
T 3oaj_A           85 YVVPKGAMAFWEKRLEKFNVPYTK----IERFGEQYVEFDDPHGLHLEIVEREEGEANTWTFGEVTPDVAIKGFGGATLL  160 (335)
T ss_dssp             EEECTTCHHHHHHHHHHTTCCCEE----EEETTEEEEEEECTTSCEEEEEECSCSCCCCCCBTTBCTTTSCCEEEEEEEE
T ss_pred             EEecHHHHHHHHHHHHhCcceeee----eccCCcEEEEEECCCCCEEEEEEeCCCCcCCCcCCCCChhhhhccccceEEE
Confidence            9999  999999999999998863    223456889999999999999987632               1368999999


Q ss_pred             cCCHHHHHHHHHHhcCCEEEeee
Q 022769          252 VGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       252 v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      |+|++++.+||+++|||++.++.
T Consensus       161 v~Dle~t~~FY~~vLG~~~~~~~  183 (335)
T 3oaj_A          161 SEQPDKTADLLENIMGLERVGKE  183 (335)
T ss_dssp             CSSHHHHHHHHHHTSCCEEEEEE
T ss_pred             ECCHHHHHHHHHHHhCCEEeecc
Confidence            99999999999999999999863

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.90  E-value=2.4e-22  Score=184.55  Aligned_cols=166  Identities=18%  Similarity=0.212  Sum_probs=131.9

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      +|++|+||.|.|+|++++++||+++|||++..+..      ..+++.......++.+.+....       ..++.|++|.
T Consensus        14 ~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~~-------~~gl~~~a~~   80 (365)
T 4ghg_A           14 DILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKGP-------VAALKAMAFR   80 (365)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-------SCEEEEEEEE
T ss_pred             CCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccCC-------CCCcceEEEE
Confidence            58899999999999999999999999999987643      2467776555444555555432       2389999999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC---------------CCCCceeeeeec
Q 022769          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------TPEPLCQVMLRV  252 (292)
Q Consensus       191 V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~---------------~~~~l~hv~l~v  252 (292)
                      |.+   ++++.++|+++|+.+...+.....+....+||+||+|+.|||+....               .+.+++||+|.+
T Consensus        81 v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~rlgHV~L~v  160 (365)
T 4ghg_A           81 VRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQVT  160 (365)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCTTTCCTTCCCEEEEEEEEE
T ss_pred             eCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeeccccccccccccccccCcceeEEEEee
Confidence            975   88899999999999876544433445567899999999999995431               134799999999


Q ss_pred             CCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCCCC
Q 022769          253 GDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPNK  290 (292)
Q Consensus       253 ~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~  290 (292)
                      .|++++.+||++ |||++++....++......|++.+.
T Consensus       161 ~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~  197 (365)
T 4ghg_A          161 PDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKG  197 (365)
T ss_dssp             SCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSS
T ss_pred             cCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCC
Confidence            999999999965 9999999877777777788887654

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.89  E-value=4.2e-22  Score=178.44  Aligned_cols=167  Identities=22%  Similarity=0.252  Sum_probs=123.5

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .+++|+||.|.|+|++++++||+++|||++..+..  ++   ..++...+...+..+.+....       ..++.|++|.
T Consensus         5 ~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~---~~~l~~~~~~~~~~l~l~~~~-------~~~~~h~a~~   72 (309)
T 3hpy_A            5 GVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QG---RVYFKCWDERDHSCYIIREAD-------TAGIDFFGFK   72 (309)
T ss_dssp             SEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TS---CEEEECTTCCBSCSEEEEECS-------SCEEEEEEEE
T ss_pred             ccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CC---eEEEEeccCCCceEEEEEeCC-------CCceeEEEEE
Confidence            46799999999999999999999999999987632  11   245554122222334444321       2388999999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC----------------------CCCCc
Q 022769          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP----------------------TPEPL  245 (292)
Q Consensus       191 V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~----------------------~~~~l  245 (292)
                      |+|   +++++++|+++|+++...+.....+..+.+||+||+||.|||++...                      .+.+|
T Consensus        73 v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i  152 (309)
T 3hpy_A           73 VLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQL  152 (309)
T ss_dssp             ESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGSSSCCSEE
T ss_pred             ECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccceecccccccCCCCCccccCCCccccee
Confidence            986   89999999999999865544322345678999999999999997542                      12368


Q ss_pred             eeeeeecCCHHHHHHHHHHhcCCEEEeeecCCC-CcEEEEEcCCC
Q 022769          246 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-YKVNSYLLPPN  289 (292)
Q Consensus       246 ~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~  289 (292)
                      +|+.|.|+|++++.+||+++|||++.+....++ ......|+..+
T Consensus       153 ~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~  197 (309)
T 3hpy_A          153 DHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCS  197 (309)
T ss_dssp             EEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESS
T ss_pred             eeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecC
Confidence            999999999999999999999999998765443 33445555443

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.89  E-value=8.1e-22  Score=179.26  Aligned_cols=163  Identities=14%  Similarity=0.192  Sum_probs=124.3

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .+++|+||.|.|+|++++++||+++|||++..+..      ...++.......+..+.+....       ..++.|++|.
T Consensus         8 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-------~~g~~~~af~   74 (339)
T 3lm4_A            8 DIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKITEAP-------EAGMGHAAMR   74 (339)
T ss_dssp             SEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET------TEEEEECTTCSSSCSEEEEECS-------SCEEEEEEEE
T ss_pred             CCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC------CEEEEEecCCCCceEEEEeeCC-------CCCcceEEEE
Confidence            47899999999999999999999999999987632      1355554322223344444422       2479999999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC------------------------CCC
Q 022769          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP------------------------TPE  243 (292)
Q Consensus       191 V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~------------------------~~~  243 (292)
                      |+|   +++++++|+++|+++...+.  ..+..+.+||+||+|+.|||+....                        .+.
T Consensus        75 v~~~~dld~~~~~l~~~G~~~~~~~~--~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  152 (339)
T 3lm4_A           75 TSSPEALERRAKSLTDGNVDGTWSED--QFGYGKTFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPVK  152 (339)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCEEEECC--STTBCCEEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSCCCSBSSCCC
T ss_pred             eCCHHHHHHHHHHHHHCCCceeeccC--CCCceEEEEEECCCCCEEEEEEeeeEcCCCccccccccCcccccCCCCCCcc
Confidence            997   88999999999999876554  2344567899999999999986421                        234


Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCCC
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPN  289 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~  289 (292)
                      +|+|+.|.|.|++++.+||+++|||++++... ++......|+..+
T Consensus       153 ~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~  197 (339)
T 3lm4_A          153 RIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSN  197 (339)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESS
T ss_pred             eeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeC
Confidence            79999999999999999999999999998765 3444455555544

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.88  E-value=2.1e-21  Score=175.24  Aligned_cols=164  Identities=19%  Similarity=0.226  Sum_probs=123.3

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .+++|+|+.|.|+|++++++||+++|||++..+..      ..+++...+...+..+.+....       ..++.|++|.
T Consensus        14 ~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-------~~~~~~~~f~   80 (323)
T 1f1u_A           14 DIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQGP-------IAAVAAFAYR   80 (323)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-------SCEEEEEEEE
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC------CEEEEEecCCCCcEEEEEEECC-------CCCeeEEEEE
Confidence            47899999999999999999999999999876532      1355654332223344444421       2378899999


Q ss_pred             e---CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC---------------CCCceeeeeec
Q 022769          191 V---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------PEPLCQVMLRV  252 (292)
Q Consensus       191 V---~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~---------------~~~l~hv~l~v  252 (292)
                      |   +|+++++++|+++|+++...+.....+..+.++++||+|+.|||++....               ..+|+|+.|.|
T Consensus        81 v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~l~v  160 (323)
T 1f1u_A           81 VKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHFNQVT  160 (323)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCGGGCCTTCCCEEEEEEEEE
T ss_pred             eCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEecccccccccccccCCCCCCceeeeEEEec
Confidence            9   67999999999999998765542112334678999999999999975321               23789999999


Q ss_pred             CCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCC
Q 022769          253 GDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPP  288 (292)
Q Consensus       253 ~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~  288 (292)
                      .|++++.+|| ++|||++++....++....+.|+..
T Consensus       161 ~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~  195 (323)
T 1f1u_A          161 PDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHR  195 (323)
T ss_dssp             SCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEES
T ss_pred             CCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEc
Confidence            9999999999 9999999987655554444555544

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.87  E-value=2.9e-21  Score=172.61  Aligned_cols=153  Identities=21%  Similarity=0.270  Sum_probs=116.2

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .+++|+||.|.|+|++++++||+++|||++......  +   .+++..+....++.+.+...       ...++.|++|.
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~--~---~~~l~~~~~~~~~~l~~~~~-------~~~~~~~~~f~   71 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ--G---RVYLKAWTEVDKFSLVLREA-------DEPGMDFMGFK   71 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT--S---CEEEECTTCCBSCSEEEEEC-------SSCEEEEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC--C---cEEEEecCCCCceEEEEccC-------CCCCcceEEEE
Confidence            367999999999999999999999999999875321  1   25565543322333433321       12378999999


Q ss_pred             e---CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC----------------------CCCCc
Q 022769          191 V---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP----------------------TPEPL  245 (292)
Q Consensus       191 V---~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~----------------------~~~~l  245 (292)
                      |   +|+++++++|+++|+++...+.....+..+.+|++||+|+.|||++...                      ...++
T Consensus        72 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  151 (307)
T 1mpy_A           72 VVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRF  151 (307)
T ss_dssp             ESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCCCTTCCCEE
T ss_pred             eCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcchhcccccccccCCcCCcccCCCCCcCce
Confidence            9   7899999999999999876553121234467899999999999998431                      12358


Q ss_pred             eeeeeecCCHHHHHHHHHHhcCCEEEeeec
Q 022769          246 CQVMLRVGDLDRAINFYKKAFGMELLRKRD  275 (292)
Q Consensus       246 ~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~  275 (292)
                      +|+.|.|.|++++.+||+++|||++.....
T Consensus       152 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~  181 (307)
T 1mpy_A          152 DHALMYGDELPATYDLFTKVLGFYLAEQVL  181 (307)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEEEE
T ss_pred             eeEEEEcCCHHHHHHHHHHHcCCeeEeeee
Confidence            999999999999999999999999987643

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.87  E-value=4.3e-21  Score=170.32  Aligned_cols=148  Identities=16%  Similarity=0.232  Sum_probs=114.6

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      +++|+||.|.|+|++++++||+++|||++..+..  .    .+++..+...  +.+.+...       ...++.|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~----~~~l~~~~~~--~~l~~~~~-------~~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG--D----AALYRADQRA--WRIAVQPG-------ELDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSBS--CSEEEEEC-------TTCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC--C----eEEEEcCCce--EEEEEccC-------CCCCccEEEEEE
Confidence            6799999999999999999999999999977532  1    2455544332  22333321       123788999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeec--CCCCeEEEEEECCCCCEEEEEEcCCC------------------CCCceee
Q 022769          192 E---DVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQV  248 (292)
Q Consensus       192 ~---Dl~~~~~~L~~~G~~i~~~p~~~--~~g~~~~~y~~DPdG~~iel~e~~~~------------------~~~l~hv  248 (292)
                      +   |+++++++|+++|+++..++...  ..+..+.+||+||+|+.|||++....                  ..+++|+
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~hv  146 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHF  146 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCCCBCCGGGCSCEE
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECccccccCCCCCCCCccccccCCcccceE
Confidence            8   89999999999999987665431  12345678999999999999976421                  1368999


Q ss_pred             eeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          249 MLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       249 ~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      .|.|+|++++.+||+++|||++.+..
T Consensus       147 ~l~v~D~~~a~~FY~~~lG~~~~~~~  172 (292)
T 1kw3_B          147 VRCVPDTAKAMAFYTEVLGFVLSDII  172 (292)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred             EEecCCHHHHHHHHHhccCCEEeeee
Confidence            99999999999999999999998653

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.87  E-value=1.3e-20  Score=170.99  Aligned_cols=161  Identities=15%  Similarity=0.181  Sum_probs=117.2

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCC-CceEEEEEeeCCCCceEEEEEEecCCCCC-CcCCCceEEEE
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFGHFG  188 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-~~~g~g~~hia  188 (292)
                      .+++|+||.|.|+|++++++||+++|||++.......+ ......++..+.......+.+........ .....++.|++
T Consensus        27 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hia  106 (338)
T 1zsw_A           27 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIG  106 (338)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEE
Confidence            36799999999999999999999999999876642111 11112223222212234455544322111 11224789999


Q ss_pred             EeeC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC------------------CCCcee
Q 022769          189 IAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQ  247 (292)
Q Consensus       189 ~~V~---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~------------------~~~l~h  247 (292)
                      |.|+   |+++++++|+++|+++...+. . .| .+.+||+||||+.|||++....                  ..+++|
T Consensus       107 f~v~~~~dld~~~~~l~~~G~~~~~~~~-~-~G-~~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~~~~~~~~~~~~l~h  183 (338)
T 1zsw_A          107 LLVPSEDSLHYWKERFEKFDVKHSEMTT-Y-AN-RPALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGS  183 (338)
T ss_dssp             EEESCHHHHHHHHHHHHHTTCEECCSEE-E-TT-EEEEEEECTTCCEEEEEECTTCCCTTCCCCTTCSSCGGGSCCEEEE
T ss_pred             EEcCCHHHHHHHHHHHHHCCCccccccc-c-CC-cEEEEEECCCCCEEEEEEcCCccccccCcCcCCCCCccccCceEEE
Confidence            9998   689999999999999875544 2 33 4789999999999999986531                  136899


Q ss_pred             eeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          248 VMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       248 v~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      +.|.|.|++++.+||+++|||++....
T Consensus       184 v~l~v~Dl~~a~~FY~~~LG~~~~~~~  210 (338)
T 1zsw_A          184 VELTVRRLDKMASTLTEIFGYTEVSRN  210 (338)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEeec
Confidence            999999999999999999999998754

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.86  E-value=1.8e-20  Score=146.44  Aligned_cols=130  Identities=56%  Similarity=1.052  Sum_probs=99.9

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~  192 (292)
                      ++|.|+.|.|+|++++.+||+++|||++......+++.+..+++..+.......+++...........+.++.|++|.|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   80 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeC
Confidence            58999999999999999999999999998765544455666777766533334566655333222334558899999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCCC
Q 022769          193 DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  242 (292)
Q Consensus       193 Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~~  242 (292)
                      |+++++++|+++|+++..+|...+.|..+.+|++||+|+.|||++..+..
T Consensus        81 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~~  130 (135)
T 1f9z_A           81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAG  130 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC----
T ss_pred             CHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCCC
Confidence            99999999999999998777666666557789999999999999876543

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.86  E-value=7.8e-21  Score=169.04  Aligned_cols=147  Identities=21%  Similarity=0.292  Sum_probs=115.0

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      +++|+||.|.|+|++++++||+++|||++.....  .    .+++..++..  +.+.+...       ...++.|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~----~~~~~~~~~~--~~l~~~~~-------~~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD--N----GDLFRIDSRA--WRIAVQQG-------EVDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSBS--CSEEEEEC-------TTCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC--C----eEEEEeCCCc--EEEEEecC-------CCCCccEEEEEe
Confidence            5789999999999999999999999999987632  1    3555544332  23333332       124789999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeec--CCCCeEEEEEECCCCCEEEEEEcCCC------------------CCCceee
Q 022769          192 E---DVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQV  248 (292)
Q Consensus       192 ~---Dl~~~~~~L~~~G~~i~~~p~~~--~~g~~~~~y~~DPdG~~iel~e~~~~------------------~~~l~hv  248 (292)
                      +   |+++++++|+++|+++...+...  ..+..+.+|++||+|+.|||++....                  ..+++|+
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~hv  146 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHF  146 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCSCBCCGGGCSCEE
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECccccccCCccCCCcccccccCccccceE
Confidence            8   89999999999999987655431  12345778999999999999986521                  1368999


Q ss_pred             eeecCCHHHHHHHHHHhcCCEEEee
Q 022769          249 MLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       249 ~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .|.|.|++++.+||+++|||++.+.
T Consensus       147 ~l~v~D~~~a~~FY~~~lG~~~~~~  171 (297)
T 1lgt_A          147 VRCVPDSDKALAFYTDVLGFQLSDV  171 (297)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEE
T ss_pred             EEecCCHHHHHHHHHHhcCCeeeeE
Confidence            9999999999999999999999865

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.85  E-value=1.5e-20  Score=167.42  Aligned_cols=149  Identities=14%  Similarity=0.164  Sum_probs=114.5

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEE-EeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEE
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLR-KRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~-~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~  189 (292)
                      .+++|+|+.|.|+|++++++||+++|||++.. +.   ++   .+++..+...  +.+.+...       ...++.|++|
T Consensus         2 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~---~~~~~~~~~~--~~l~l~~~-------~~~~~~~~~~   66 (300)
T 2zyq_A            2 SIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EG---ALYLRMDDFP--ARLVVVPG-------EHDRLLEAGW   66 (300)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCC---SS---CEEEESSSSS--CSEEEEEC-------SSCEEEEEEE
T ss_pred             CcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCC---CC---eEEEEeCCCc--EEEEEecC-------CCCCcceEEE
Confidence            36799999999999999999999999999865 32   11   2455554332  23444432       1247889999


Q ss_pred             eeCC---HHHHHHHHHHcCCeeecCCeec--CCCCeEEEEEECCCCCEEEEEEc-CCC---------------CCCceee
Q 022769          190 AVED---VAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER-GPT---------------PEPLCQV  248 (292)
Q Consensus       190 ~V~D---l~~~~~~L~~~G~~i~~~p~~~--~~g~~~~~y~~DPdG~~iel~e~-~~~---------------~~~l~hv  248 (292)
                      .|+|   +++++++|+++|+++..++...  ..+..+.+||+||+||.|||++. ...               ..+++|+
T Consensus        67 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~l~hv  146 (300)
T 2zyq_A           67 ECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGHV  146 (300)
T ss_dssp             ECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEECCCCCCSCCCCTTCCCBCCGGGCSCEE
T ss_pred             EeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEcCCcCCCCCccCCCcccccCCCccCeE
Confidence            9975   8889999999999987655432  12345678999999999999987 211               2368999


Q ss_pred             eeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          249 MLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       249 ~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      .|.|.|++++.+||+++|||++.+..
T Consensus       147 ~l~v~D~~~a~~FY~~~LG~~~~~~~  172 (300)
T 2zyq_A          147 VLSTRDDAEALHFYRDVLGFRLRDSM  172 (300)
T ss_dssp             EEECSCHHHHHHHHHTTTCCEEEEEE
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEeeee
Confidence            99999999999999999999998653

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.85  E-value=4.9e-20  Score=165.36  Aligned_cols=150  Identities=23%  Similarity=0.343  Sum_probs=117.6

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .+++|.|+.|.|+|++++++||+++|||++.....      ..+++..++...+..+.+....       ..++.|++|.
T Consensus         5 ~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-------~~~~~~~~~~   71 (310)
T 3b59_A            5 RVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADEHHVVQLRRAD-------ENRIDVIALA   71 (310)
T ss_dssp             CEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEECTTSCCSCSEEEEECS-------SCEEEEEEEE
T ss_pred             ecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC------CeEEEEECCCCCCEEEEEEECC-------CCCeeEEEEE
Confidence            46799999999999999999999999999876532      1355655431012344444421       2478899999


Q ss_pred             e---CCHHHHHHHHHHcCCeeecCCee--cCCCCeEEEEEECCCCCEEEEEEcCC------------CCCCceeeeeecC
Q 022769          191 V---EDVAKTVDLVKAKGGKVTREPGP--VKGGNTVIAFIEDPDGYKFELLERGP------------TPEPLCQVMLRVG  253 (292)
Q Consensus       191 V---~Dl~~~~~~L~~~G~~i~~~p~~--~~~g~~~~~y~~DPdG~~iel~e~~~------------~~~~l~hv~l~v~  253 (292)
                      |   +|+++++++|+++|+++..++..  .+ +..+.++++||+|+.|||++..+            .+.+++|+.|.|+
T Consensus        72 v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~l~hv~l~v~  150 (310)
T 3b59_A           72 ADSRSDVDALRASVEAAGCKVASEPAVLATP-GGGYGFRFFSPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHSP  150 (310)
T ss_dssp             ESSHHHHHHHHHHHHHHTCCBCCCSEECCST-TCCEEEEEECTTSCEEEEEECCCCCCCCCCCTTCCCCCEEEEEEEEET
T ss_pred             eCCHHHHHHHHHHHHhCCCeEeecCcccccc-CCceEEEEECCCCCEEEEEEcccccCCCccCCCCCcCcEeceEEEecC
Confidence            9   67999999999999998777654  33 34567889999999999997643            1347899999999


Q ss_pred             CHHHHHHHHHHhcCCEEEeee
Q 022769          254 DLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       254 D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      |++++.+||+++|||++++..
T Consensus       151 D~~~a~~FY~~~LG~~~~~~~  171 (310)
T 3b59_A          151 NHQDMVKFFTDVLGFKVSDWL  171 (310)
T ss_dssp             THHHHHHHHHHTSCCEEEEEE
T ss_pred             CHHHHHHHHHhCCCCEEEEee
Confidence            999999999999999999864

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.84  E-value=2.3e-20  Score=166.82  Aligned_cols=148  Identities=16%  Similarity=0.234  Sum_probs=114.5

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .+++|+||.|.|+|++++++||+++|||++....  .+ .  ..++..+...  ..+.+....       ..++.|++|.
T Consensus         3 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~~-~--~~~~~~~~~~--~~l~l~~~~-------~~~~~~~~f~   68 (305)
T 2wl9_A            3 KVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDG--ED-D--RIYLRMDRWH--HRIVLHADG-------SDDLAYIGWR   68 (305)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCS--CT-T--EEEEECSSBS--CSEEEECSS-------CCEEEEEEEE
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHhccCCEEeecc--CC-C--eEEEEeCCCe--EEEEEEECC-------CCCeEEEEEE
Confidence            3679999999999999999999999999987521  11 1  3455554432  234444321       2478999999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCeec--CCCCeEEEEEECCCCCEEEEEEc-CC------------------CCCCce
Q 022769          191 VE---DVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER-GP------------------TPEPLC  246 (292)
Q Consensus       191 V~---Dl~~~~~~L~~~G~~i~~~p~~~--~~g~~~~~y~~DPdG~~iel~e~-~~------------------~~~~l~  246 (292)
                      |+   |+++++++|+++|+++..+|...  ..+..+.+|++||+|+.|||++. ..                  ...+++
T Consensus        69 v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  148 (305)
T 2wl9_A           69 VAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLG  148 (305)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEEECBCTTSCCCCSSCCSSCBCCTTTCSC
T ss_pred             ECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEECCCccCCCCcCCCCCcccceecCCceee
Confidence            97   59999999999999987665532  23456789999999999999976 21                  113789


Q ss_pred             eeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          247 QVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       247 hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      |+.|.|+|++++.+|| ++|||++.+.
T Consensus       149 hv~l~v~D~~~s~~FY-~vLG~~~~~~  174 (305)
T 2wl9_A          149 HIIIREDDVEEATRFY-RLLGLEGAVE  174 (305)
T ss_dssp             EEEECCSCHHHHHHHH-HHHTCEEEEC
T ss_pred             eEEEECCCHHHHHHHH-HHcCCeeeee
Confidence            9999999999999999 9999999864

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.84  E-value=1.4e-19  Score=160.38  Aligned_cols=154  Identities=22%  Similarity=0.185  Sum_probs=113.3

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCC-ceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      ..+.|+.|.|+|++++++||+++|||++......... .+.  .+..++.   ....+.......+ .......+++|.|
T Consensus        31 g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~--~~~~~g~---~~~~l~~~~~~~~-~~~~~~~~~~~~v  104 (282)
T 3oxh_A           31 GTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYS--MATLNGE---AVAAIAPMPPGAP-EGMPPIWNTYIAV  104 (282)
T ss_dssp             TSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEE--EEEETTE---EEEEEEECCSCC----CCCEEEEEEEC
T ss_pred             CCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEE--EEEeCCe---eeEeeccCCCCCC-CCCCCcEEEEEEe
Confidence            4688888999999999999999999998765321110 232  2322221   1222322211111 1122456799999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC--------CCCceeeeeecCCHHHHHHHHH
Q 022769          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT--------PEPLCQVMLRVGDLDRAINFYK  263 (292)
Q Consensus       192 ~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~--------~~~l~hv~l~v~D~~~s~~fY~  263 (292)
                      +|+++++++++++|+++..+|...+. ..+.++++||+||.|+|++....        ++++.|+.|.|.|++++.+||+
T Consensus       105 ~d~d~~~~~l~~~G~~~~~~p~~~~~-~g~~~~~~DP~G~~i~l~~~~~~~~~~~~~~~~~~~~~~l~v~D~~~a~~FY~  183 (282)
T 3oxh_A          105 DDVDAVVDKVVPGGGQVMMPAFDIGD-AGRMSFITDPTGAAVGLWQANRHIGATLVNETGTLIWNELLTDKPDLALAFYE  183 (282)
T ss_dssp             SCHHHHHTTTTTTTCEEEEEEEEETT-TEEEEEEECTTCCEEEEEEESSCCSCSBCSSTTSEEEEEEECSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHCCCEEEECCEecCC-CeEEEEEECCCCCEEEEEEccccCCccccCCCCccEEEEEEcCCHHHHHHHHH
Confidence            99999999999999999877766643 45789999999999999987642        4579999999999999999999


Q ss_pred             HhcCCEEEee
Q 022769          264 KAFGMELLRK  273 (292)
Q Consensus       264 ~~lG~~~~~~  273 (292)
                      ++|||++.+.
T Consensus       184 ~vlG~~~~~~  193 (282)
T 3oxh_A          184 AVVGLTHSSM  193 (282)
T ss_dssp             HHHCCEEEEC
T ss_pred             HHhCCeeeec
Confidence            9999999875

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.84  E-value=3.3e-20  Score=165.68  Aligned_cols=148  Identities=18%  Similarity=0.142  Sum_probs=112.9

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .+++|+|+.|.|+|++++++||+++|||++..+..  .   ...++..+...  ..+.+....       ..++.|++|.
T Consensus         6 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~--~~l~l~~~~-------~~~~~~~~~~   71 (302)
T 2ehz_A            6 AVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--K---DRFYLRMDYWH--HRIVVHHNG-------QDDLEYLGWR   71 (302)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--S---SEEEEESSSBS--CSEEEESSC-------CSEEEEEEEE
T ss_pred             cccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--C---cceEEEeCCCc--eEEEEecCC-------CCCeeEEEEE
Confidence            46799999999999999999999999999875421  1   13455543322  233443321       2378899999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCeecC--CCCeEEEEEECCCCCEEEEEEcCC----C--------C-------CCce
Q 022769          191 VE---DVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERGP----T--------P-------EPLC  246 (292)
Q Consensus       191 V~---Dl~~~~~~L~~~G~~i~~~p~~~~--~g~~~~~y~~DPdG~~iel~e~~~----~--------~-------~~l~  246 (292)
                      |.   |+++++++|+++|+++...+...+  .+..+.+|++||+|+.|||++..+    .        +       .+++
T Consensus        72 v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  151 (302)
T 2ehz_A           72 VAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQGLG  151 (302)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEECBCTTSCCCCSSCCSSCBCCGGGCSC
T ss_pred             ECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECCCccCCCCccCCCCcccceecCCCccc
Confidence            95   689999999999999876654332  245678999999999999997531    0        0       1789


Q ss_pred             eeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          247 QVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       247 hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      |+.|.|+|++++.+|| ++|||++.+.
T Consensus       152 hv~l~v~D~~~a~~FY-~~lG~~~~~~  177 (302)
T 2ehz_A          152 HCIVRQTDVAEAHKFY-SLLGFRGDVE  177 (302)
T ss_dssp             EEEECCSCHHHHHHHH-HHTTCBCCEE
T ss_pred             eEEEEcCCHHHHHHHH-HhcCCeeeeE
Confidence            9999999999999999 9999998754

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.83  E-value=8.9e-20  Score=159.12  Aligned_cols=149  Identities=16%  Similarity=0.253  Sum_probs=113.8

Q ss_pred             hccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEE
Q 022769          108 VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  187 (292)
Q Consensus       108 ~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hi  187 (292)
                      ....+++|+||.|.|+|++++.+||+++|||++..+..      ..+++..++    ..+.+.....     .+.++.|+
T Consensus        20 ~~~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~----~~l~l~~~~~-----~~~~~~hi   84 (252)
T 3pkv_A           20 FQGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGV----SQIQFRAAAD-----GTKPFYHI   84 (252)
T ss_dssp             -----CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETT----EEEEEEECCT-----TCCCCCEE
T ss_pred             ccCcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCC----EEEEEEECCC-----CCCCeeEE
Confidence            33457899999999999999999999999999877632      136666543    3455554321     13368899


Q ss_pred             EEeeC--CHHHHHHHHHHcCCeeecC-Cee---cCCCCeEEEEEECCCCCEEEEEEcCCC------------CCCceeee
Q 022769          188 GIAVE--DVAKTVDLVKAKGGKVTRE-PGP---VKGGNTVIAFIEDPDGYKFELLERGPT------------PEPLCQVM  249 (292)
Q Consensus       188 a~~V~--Dl~~~~~~L~~~G~~i~~~-p~~---~~~g~~~~~y~~DPdG~~iel~e~~~~------------~~~l~hv~  249 (292)
                      +|.|+  ++++++++|+++ +++..+ +..   ...+..+.+||+||||+.+||+++...            ..+++||.
T Consensus        85 af~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~~~~i~glghV~  163 (252)
T 3pkv_A           85 AINIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEIN  163 (252)
T ss_dssp             EEEECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESSSSCCCCSCCCGGGCCEEEEEE
T ss_pred             EEEecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCCCCccccCCCCHHHCcEeeeEE
Confidence            99986  599999999999 887542 211   134567889999999999999987532            23799999


Q ss_pred             eecCCHHHHHHHHHHhcCCEEEee
Q 022769          250 LRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       250 l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      |.|.|++++.+|| ++|||++.+.
T Consensus       164 L~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          164 ITTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             EECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             EEeCCHHHHHHHH-HHcCCCcccC
Confidence            9999999999999 9999999975

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.83  E-value=8.4e-20  Score=165.78  Aligned_cols=158  Identities=11%  Similarity=0.088  Sum_probs=110.0

Q ss_pred             ccchhhhhhhhhcCCeeeeccCCCCCCCeeecCCccchhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCC
Q 022769           68 FFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP  147 (292)
Q Consensus        68 ~~g~~~~~~~d~dg~~~~~~~~~~~~~a~~~~~p~g~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~  147 (292)
                      ..|.+.+.|.||||+.+++..+.......   +..+.+. ...++++|+||+|.|+|++++.+||+++|||++..+..  
T Consensus       111 ~~g~~~~~f~DPdGn~iEl~~~~~~~~~~---~~~~~v~-~~~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~--  184 (335)
T 3oaj_A          111 RFGEQYVEFDDPHGLHLEIVEREEGEANT---WTFGEVT-PDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG--  184 (335)
T ss_dssp             ETTEEEEEEECTTSCEEEEEECSCSCCCC---CCBTTBC-TTTSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET--
T ss_pred             cCCcEEEEEECCCCCEEEEEEeCCCCcCC---CcCCCCC-hhhhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC--
Confidence            34566788999999999998775432211   1112111 23568999999999999999999999999999987642  


Q ss_pred             CCceEEEEEeeCCCCceEEEEEEecCCCCCCcCC-CceEEEEEeeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEE
Q 022769          148 EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG-TGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIA  223 (292)
Q Consensus       148 ~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g-~g~~hia~~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~  223 (292)
                        .  ...+..++....+.  +......+....+ .+++|+||.|+|   ++++.++|+++|+++...   .+.+++.++
T Consensus       185 --~--~~~~~~g~~~~~l~--l~~~~~~~~~~~g~g~~~HiAf~v~d~~~l~~~~~~L~~~G~~~~~~---~~r~~~~si  255 (335)
T 3oaj_A          185 --D--FVRYRSAGDIGNVI--DLKLTPIGRGQMGAGTVHHIAWRANDDEDQLDWQRYIASHGYGVTPV---RDRNYFNAI  255 (335)
T ss_dssp             --T--EEEEECSSSSSCEE--EEESSCCCBCBCSBTEEEEEEEEESSHHHHHHHHHHHHHTTCCCCCC---EECSSSEEE
T ss_pred             --C--EEEEEeCCCCcEEE--EEeCCCCCcCCCCCcceEEEEEEcCCHHHHHHHHHHHHHCCCCcccc---ccCCcEEEE
Confidence              1  23333343333333  3332221111122 269999999998   667899999999986532   334567899


Q ss_pred             EEECCCCCEEEEEEcCC
Q 022769          224 FIEDPDGYKFELLERGP  240 (292)
Q Consensus       224 y~~DPdG~~iel~e~~~  240 (292)
                      ||+||+|++|||++.+|
T Consensus       256 YfrDP~G~~iEl~td~p  272 (335)
T 3oaj_A          256 YFREHGEILFEIATDPP  272 (335)
T ss_dssp             EEECTTSCEEEEEESCS
T ss_pred             EEECCCCcEEEEEeCCC
Confidence            99999999999999865

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.82  E-value=6.3e-20  Score=147.98  Aligned_cols=128  Identities=20%  Similarity=0.179  Sum_probs=90.0

Q ss_pred             hccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCC-----cCCC
Q 022769          108 VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY-----DIGT  182 (292)
Q Consensus       108 ~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~-----~~g~  182 (292)
                      .+...|+|.|+.|.|+|+++|++||+++|||++..+...++  .....+..........+...........     ..+.
T Consensus        20 ~~~~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   97 (155)
T 4g6x_A           20 FQSNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVAD   97 (155)
T ss_dssp             ---CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHT
T ss_pred             eccCceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccC
Confidence            45678899999999999999999999999999876654333  2223333322222223333222111110     1234


Q ss_pred             ceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      |+.|++|.|+|+++++++|+++|+++..+|...++|  +.+||+|||||+|||+|..
T Consensus        98 g~~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g--~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A           98 GIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPV--VTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             TCCSEEEEESCHHHHHHHHHHTTCCEEEEEEECSSC--EEEEEECSSSCEEEEEEC-
T ss_pred             CceEEEeeechhhhhhhHHhcCCcEEeeCCEEcCCe--EEEEEECCCCCEEEEEEEC
Confidence            778999999999999999999999998887776554  6789999999999999864

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.80  E-value=3.9e-18  Score=155.93  Aligned_cols=157  Identities=17%  Similarity=0.242  Sum_probs=118.2

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCC------CcCCCce
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK------YDIGTGF  184 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~------~~~g~g~  184 (292)
                      .+++|+||.+.|+|++++.+||+++|||++..+....++  ....+..+.    ..+.+........      ...+.++
T Consensus         2 ~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g~----~~l~l~~~~~~~~~~~~~~~~~g~g~   75 (357)
T 2r5v_A            2 QNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQGQ----VTLVLTEPTSDRHPAAAYLQTHGDGV   75 (357)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEETT----EEEEEEEESSTTSHHHHHHHHHSSEE
T ss_pred             CCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeCC----EEEEEeCCCCCCCHHHHHHHhcCCeE
Confidence            468999999999999999999999999999876543322  223333332    3455554211111      1135689


Q ss_pred             EEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC-------C------------C----
Q 022769          185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG-------P------------T----  241 (292)
Q Consensus       185 ~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~-------~------------~----  241 (292)
                      .|++|.|+|+++++++++++|+++..+|.....|....+.+++|+|..++|+++.       +            .    
T Consensus        76 ~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~~~~~f~p~~~~~~~~~~~~~~~~~  155 (357)
T 2r5v_A           76 ADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDGTSAELPPGFTGSMDVTNHGKGDVD  155 (357)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCSSSCCCCTTCEECSCCCCTTCTTCC
T ss_pred             EEEEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecccCCCCCCCCCcccCcccccCCCCCC
Confidence            9999999999999999999999987665543334445678999999999999752       1            0    


Q ss_pred             CCCceeeeeecC--CHHHHHHHHHHhcCCEEEee
Q 022769          242 PEPLCQVMLRVG--DLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       242 ~~~l~hv~l~v~--D~~~s~~fY~~~lG~~~~~~  273 (292)
                      ..+++|+++.|.  |++++.+||+++|||++...
T Consensus       156 ~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~  189 (357)
T 2r5v_A          156 LLGIDHFAICLNAGDLGPTVEYYERALGFRQIFD  189 (357)
T ss_dssp             CCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEE
T ss_pred             cceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEE
Confidence            125899999999  99999999999999999854

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.80  E-value=2.2e-18  Score=134.03  Aligned_cols=124  Identities=18%  Similarity=0.257  Sum_probs=92.6

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .+++|+|+.|.|+|++++++||+++|||++......+++ ...+.+..+.  ....+.+.............+..|++|.
T Consensus        10 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~~   86 (133)
T 4hc5_A           10 MIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPPG--AQTQVALGLPSWYEDGRKPGGYTGISLI   86 (133)
T ss_dssp             SCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECTT--CSCEEEEECGGGCSSCCCSCEEEEEEEE
T ss_pred             cccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECCC--CceEEEEecCcccccccCCCCeEEEEEE
Confidence            467999999999999999999999999999876532222 2223333322  2345566554321111223478899999


Q ss_pred             eCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          191 VEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       191 V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      |+|+++++++|+++|+++..+|...+.|. +.+|++||+|+.|||++.
T Consensus        87 v~d~~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           87 TRDIDEAYKTLTERGVTFTKPPEMMPWGQ-RATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             ESCHHHHHHHHHHTTCEESSSCEECTTSC-EEEEEECTTCEEEEEEEC
T ss_pred             eCCHHHHHHHHHHCCCEeecCCCcCCCCC-EEEEEECCCCCEEEEEeC
Confidence            99999999999999999988877777654 789999999999999873

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.80  E-value=2e-18  Score=133.92  Aligned_cols=122  Identities=27%  Similarity=0.350  Sum_probs=92.3

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEe-------cCCCC---CCc-
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY-------NYGVD---KYD-  179 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~-------~~~~~---~~~-  179 (292)
                      .+++|+||.|.|+|++++++||+++|||++..+...++.....+++..++.    .+++..       .....   ... 
T Consensus         2 ~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~l~l~~~~~~~~~~~~~~~~~~~~~   77 (134)
T 3l7t_A            2 KLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDI----ELEIFGNKLTDSNYCAPPERISWPR   77 (134)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTE----EEEEEECCTTSTTCCCCCCCCCSSS
T ss_pred             ceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCe----EEEEEecccccccccCCccccCCCC
Confidence            367999999999999999999999999999877654444444566665532    444544       11111   111 


Q ss_pred             CCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       180 ~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      .+.|++|++|.|+|+++++++|+++|+++...+..... +.+.+|++||+|+.|||+|
T Consensus        78 ~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           78 EACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYT-GKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTS-CCEEEEEECTTCCEEEEEC
T ss_pred             CCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCC-ceEEEEEECCCCCEEEEeC
Confidence            34589999999999999999999999998765544333 4577899999999999985

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.80  E-value=6.2e-18  Score=156.03  Aligned_cols=161  Identities=21%  Similarity=0.319  Sum_probs=121.1

Q ss_pred             cCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCC--ceEEEEEeeCCCCceEEEEEEecCCCCCC---------
Q 022769          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGVDKY---------  178 (292)
Q Consensus       110 ~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~l~l~~~~~~~~~---------  178 (292)
                      ..+++|+||.|.|.|++++.+||+++|||++..+.....+  ......+..+.    +.+++.........         
T Consensus        18 ~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~----~~l~l~~~~~~~~~~~~~~~~~~   93 (381)
T 1t47_A           18 FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGS----ARFVLTSVIKPATPWGHFLADHV   93 (381)
T ss_dssp             SCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETT----EEEEEEEESSCCSHHHHHHHHHH
T ss_pred             CcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCC----EEEEEecCCCCCCcchhHHHHHH
Confidence            3478999999999999999999999999999876432111  22344454432    45666653211111         


Q ss_pred             -cCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecC--CCCeEEEEEECCCCCEEEEEEcC-------C-----C--
Q 022769          179 -DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERG-------P-----T--  241 (292)
Q Consensus       179 -~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~--~g~~~~~y~~DPdG~~iel~e~~-------~-----~--  241 (292)
                       ..+.++.|++|+|+|+++++++++++|+++..+|....  .|....+.++||+|+.++|+++.       +     .  
T Consensus        94 ~~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~~~~~f~p~~~~~~~~  173 (381)
T 1t47_A           94 AEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGPYLPGYVAAAPI  173 (381)
T ss_dssp             HHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSSSSTTCEECCCS
T ss_pred             HhcCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCCCCCCCCCCCcccccc
Confidence             12569999999999999999999999999987665432  23345778999999999999752       1     0  


Q ss_pred             --------CCCceeeeeecC--CHHHHHHHHHHhcCCEEEeee
Q 022769          242 --------PEPLCQVMLRVG--DLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       242 --------~~~l~hv~l~v~--D~~~s~~fY~~~lG~~~~~~~  274 (292)
                              ..+|+|+++.|.  |++++.+||+++|||++.+..
T Consensus       174 ~~~~~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~  216 (381)
T 1t47_A          174 VEPPAHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEF  216 (381)
T ss_dssp             SCCCSSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCC
T ss_pred             ccCCCCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeec
Confidence                    126899999999  999999999999999998753

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.80  E-value=2.3e-18  Score=136.69  Aligned_cols=123  Identities=54%  Similarity=0.910  Sum_probs=92.8

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .+++|+|+.|.|+|++++.+||+++|||++......+++.+..+++..+....+..+++...........+.++.|++|.
T Consensus         5 ~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~   84 (144)
T 2c21_A            5 PSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIG   84 (144)
T ss_dssp             -CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEE
T ss_pred             ccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEEE
Confidence            46799999999999999999999999999987654333445567777665322345666654332223345588999999


Q ss_pred             eCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          191 VEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       191 V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      |+|+++++++|+++|+++..+     .|...++|++||||+.|||++.
T Consensus        85 v~d~~~~~~~l~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~  127 (144)
T 2c21_A           85 VEDVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNE  127 (144)
T ss_dssp             ESCHHHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEH
T ss_pred             eCCHHHHHHHHHHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEc
Confidence            999999999999999998643     3333345999999999999975

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.80  E-value=1.1e-18  Score=134.73  Aligned_cols=120  Identities=18%  Similarity=0.316  Sum_probs=92.4

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCC--CCcCCCceEEEEEe
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD--KYDIGTGFGHFGIA  190 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~--~~~~g~g~~hia~~  190 (292)
                      ++|+|+.|.|+|++++++||+++|||++......++..+..+++..++ .  ..+++.......  +...+.|+.|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED-G--ARLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS-S--CEEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC-C--cEEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            689999999999999999999999999976644333445667777654 2  455555543221  12245588999999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEE
Q 022769          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (292)
Q Consensus       191 V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~  236 (292)
                      |+|   +++++++|+++|+++..+|...+. +.+.+|++||+||.|||+
T Consensus        79 v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKLRQDGFAIAGEPRMTGD-GYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCcccCCC-CcEEEEEECCCCCEEEEe
Confidence            999   889999999999999877665544 346789999999999996

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.79  E-value=2.1e-18  Score=133.86  Aligned_cols=122  Identities=26%  Similarity=0.377  Sum_probs=90.1

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCC-------cCCCce
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY-------DIGTGF  184 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~-------~~g~g~  184 (292)
                      +++|+|+.|.|+|++++.+||+++|||++......++.....+++..++.    .+++.........       ..+.|+
T Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~g~   78 (134)
T 3rmu_A            3 LGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNT----KMELLHPLGLDSPIAGFLQKNKAGGM   78 (134)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSS----EEEEEEECSTTCTTHHHHHHCTTCEE
T ss_pred             cceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCE----EEEEEecCCCCchhhhhhhccCCCCc
Confidence            57899999999999999999999999998765443333455677766532    3444432221111       134589


Q ss_pred             EEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEE--ECCCCCEEEEEE
Q 022769          185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDGYKFELLE  237 (292)
Q Consensus       185 ~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~--~DPdG~~iel~e  237 (292)
                      +|++|.|+|+++++++|+++|+++..++.....++....++  +||+|+.|||+|
T Consensus        79 ~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A           79 HHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEE
T ss_pred             eEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEc
Confidence            99999999999999999999999876644444434445556  899999999987

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.79  E-value=3.1e-18  Score=155.61  Aligned_cols=164  Identities=10%  Similarity=0.118  Sum_probs=118.2

Q ss_pred             ccchhhhhhhhhcCCeeeeccCCCCCCCe-----ee-cCCccchhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEE
Q 022769           68 FFGAKALKLLRAEGSTIEASTSGNMAPTS-----NT-VTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLL  141 (292)
Q Consensus        68 ~~g~~~~~~~d~dg~~~~~~~~~~~~~a~-----~~-~~p~g~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~  141 (292)
                      ..+.....|.||+|+.+++..+.......     .. ..+.. .......+.+|+||.|.|+|++++.+||+++|||++.
T Consensus       102 ~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~  180 (339)
T 3lm4_A          102 FGYGKTFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSK-KPLQGIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTT  180 (339)
T ss_dssp             TTBCCEEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSC-CCSBSSCCCEEEEEEEEESCHHHHHHHHHHHHCCEEE
T ss_pred             CCceEEEEEECCCCCEEEEEEeeeEcCCCccccccccCcccc-cCCCCCCcceeeeEEEEcCCHHHHHHHHHHhCCCeEE
Confidence            33466788999999999998775432210     00 00100 0111125789999999999999999999999999998


Q ss_pred             EEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCC---HHHHHHHHHHcCCeeecCCeecCCC
Q 022769          142 RKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGG  218 (292)
Q Consensus       142 ~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g  218 (292)
                      .... +++.....|+..+...+  .+.+.....    ....+++|++|.|+|   +++++++|+++|+++..+|..+..+
T Consensus       181 ~~~~-~~g~~~~~~l~~~~~~~--~l~~~~~~~----~~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~  253 (339)
T 3lm4_A          181 ERVV-DGNVEIGAWMSSNLLGH--EVACMRDMT----GGHGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGIT  253 (339)
T ss_dssp             EEEE-ETTEEEEEEEESSSSSC--SEEEEECTT----SCCSEEEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGG
T ss_pred             EEEe-cCCcEEEEEEEeCCCce--EEEEeccCC----CCCCceeEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccC
Confidence            7754 33444567777765433  344443211    123479999999999   8888999999999998888877666


Q ss_pred             CeEEEEEECCCCCEEEEEEcC
Q 022769          219 NTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       219 ~~~~~y~~DPdG~~iel~e~~  239 (292)
                      ...++|++||+||+||+++.+
T Consensus       254 ~~~~~y~~DPdG~~iEl~~~~  274 (339)
T 3lm4_A          254 QSQFLYVFEPGGNRIELFGEA  274 (339)
T ss_dssp             GEEEEEEECTTSCEEEEECCC
T ss_pred             CceEEEEEcCCCCEEEEEEcC
Confidence            778899999999999998654

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.79  E-value=9e-18  Score=150.19  Aligned_cols=186  Identities=15%  Similarity=0.173  Sum_probs=122.0

Q ss_pred             cchhhhhhhhhcCCeeeeccCCCCCCCe-eecCCccch-hhh-ccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEee
Q 022769           69 FGAKALKLLRAEGSTIEASTSGNMAPTS-NTVTEQNVL-DWV-KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRD  145 (292)
Q Consensus        69 ~g~~~~~~~d~dg~~~~~~~~~~~~~a~-~~~~p~g~~-~w~-~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~  145 (292)
                      .+.+...|.||+|+.+++..+....... ....|.... .+. ...+++|+||.|.|+|++++.+||+++|||++.....
T Consensus       103 ~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~  182 (309)
T 3hpy_A          103 ETGERVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVL  182 (309)
T ss_dssp             TBCCEEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGSSSCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEE
T ss_pred             CCeeEEEEECCCCCEEEEEEccceecccccccCCCCCccccCCCcccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEe
Confidence            4556778999999999998765532210 001111110 111 3468999999999999999999999999999987654


Q ss_pred             CCC-CceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHH---HHHHHHHHcCCeeecCCeecCCCCeE
Q 022769          146 IPE-DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGGNTV  221 (292)
Q Consensus       146 ~~~-~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~---~~~~~L~~~G~~i~~~p~~~~~g~~~  221 (292)
                      .+. +.....|+..+...+.  +.+....      ...+++|++|.|+|++   +++++|+++|+++..+|..+..+..+
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~  254 (309)
T 3hpy_A          183 SPDGDSDMGIWLSCSHKVHD--IAFVEYP------EKGKLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGC  254 (309)
T ss_dssp             CSSSCSEEEEEEESSSSSCS--EEEEECS------STTEEEEEEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEE
T ss_pred             cCCCCceEEEEEecCCCcee--EEEecCC------CCCceeEEEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccE
Confidence            332 3345677776654333  3333321      1236999999999865   46789999999998888877666778


Q ss_pred             EEEEECCCCCEEEEEEcCCCCCCc-eeeeeecCCHHHHHHHH
Q 022769          222 IAFIEDPDGYKFELLERGPTPEPL-CQVMLRVGDLDRAINFY  262 (292)
Q Consensus       222 ~~y~~DPdG~~iel~e~~~~~~~l-~hv~l~v~D~~~s~~fY  262 (292)
                      ++|++||+||+||++..+.....- .-+.....+..+...|+
T Consensus       255 ~~y~~DPdG~~iE~~~~g~~~d~~~~~~~w~~~~~~~~~~w~  296 (309)
T 3hpy_A          255 TIYAWDPSGNRFETFMGGYHPYPDYEPLSWTYDNFAQGLDYP  296 (309)
T ss_dssp             EEEEECTTSCEEEEEEECCCCCTTSCCEEECTTTC-------
T ss_pred             EEEEECCCCCEEEEEeCCcccCCCcCceECChhcccceeeec
Confidence            899999999999999875332211 11233445555555555

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.79  E-value=1.9e-18  Score=134.84  Aligned_cols=123  Identities=24%  Similarity=0.251  Sum_probs=91.7

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEe-eCCCCceEEEEEeeCCCCceEEEEEEecCCCCCC-----cCCCce
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKR-DIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY-----DIGTGF  184 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~-~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~-----~~g~g~  184 (292)
                      .+++|+||+|.|+|++++++||+ +|||++.... ..+......+++..++    ..+++.........     ..+.|+
T Consensus         4 M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~g~   78 (133)
T 3hdp_A            4 MSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGG----YRVELVAPDGEDSPINKTIKKGSTP   78 (133)
T ss_dssp             CCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETT----EEEEEEEESSTTCTHHHHTTTSCEE
T ss_pred             cceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCC----EEEEEEecCCCCChHHHHHhcCCce
Confidence            46899999999999999999999 9999986542 2233344567776542    35666553322111     015689


Q ss_pred             EEEEEeeCCHHHHHHHHHHcCCeeecCCeec-CCCCeEEEEEECCCCCEEEEEEc
Q 022769          185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPV-KGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       185 ~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~-~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      +|++|.|+|+++++++|+++|+++..+|... ..++.+.+|++||||++|||+|.
T Consensus        79 ~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           79 YHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            9999999999999999999999987654432 22356789999999999999973

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.79  E-value=8e-18  Score=157.15  Aligned_cols=162  Identities=18%  Similarity=0.223  Sum_probs=117.2

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCC--CceEEEEEeeCCCCceEEEEEEecCCCC------------
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYNYGVD------------  176 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~l~l~~~~~~~------------  176 (292)
                      .+++|+||.|.|.|++++++||++.|||++..+...+.  ..+..+++..+.    +.+.+.......            
T Consensus        22 ~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~----~~l~L~~~~~~~~~~~~~~~~~~~   97 (424)
T 1sqd_A           22 KVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGD----LRFLFTAPYSPSLSAGEIKPTTTA   97 (424)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETT----EEEEEEEECCGGGTTTCCGGGCCC
T ss_pred             cCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCC----EEEEEecCCCCccccccccccccc
Confidence            46799999999999999999999999999987753221  233445554332    455555542111            


Q ss_pred             ---C----------CcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC--
Q 022769          177 ---K----------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT--  241 (292)
Q Consensus       177 ---~----------~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~--  241 (292)
                         .          ...+.|+.|++|+|+|+++++++++++|+++..+|....+ ......+++|+|+.++|+++...  
T Consensus        98 p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~~~  176 (424)
T 1sqd_A           98 SIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAEDT  176 (424)
T ss_dssp             SSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC--
T ss_pred             ccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCCCC
Confidence               0          0134689999999999999999999999998877655432 34455566777777776653210  


Q ss_pred             -------------------C----CCceeeeeecCCHHHHHHHHHHhcCCEEEeeecCC
Q 022769          242 -------------------P----EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP  277 (292)
Q Consensus       242 -------------------~----~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~  277 (292)
                                         +    .+|+|++++|.|++++.+||+++|||++.++.+.+
T Consensus       177 ~~~~f~p~~~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~  235 (424)
T 1sqd_A          177 EKSEFLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTAD  235 (424)
T ss_dssp             ----CCTTCEECCTTTCCCCCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--
T ss_pred             CccccCCCcccccccccCCCcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEccc
Confidence                               1    16899999999999999999999999999876444

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.78  E-value=6.6e-18  Score=139.93  Aligned_cols=127  Identities=37%  Similarity=0.622  Sum_probs=97.4

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCc---------------eEEEEEEecCCC
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS---------------HFVVELTYNYGV  175 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~---------------~~~l~l~~~~~~  175 (292)
                      ..++|+|+.|.|+|++++++||+++|||++..+...+++.+..+++..+....               +..+++......
T Consensus        31 ~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  110 (187)
T 3vw9_A           31 KDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGT  110 (187)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTG
T ss_pred             ceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCC
Confidence            46799999999999999999999999999988776666777888887654311               234555432211


Q ss_pred             -----CCCc----CCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          176 -----DKYD----IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       176 -----~~~~----~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                           ..+.    ...|++|++|.|+|+++++++|+++|+++..++...+.+.  .+|++||||+.|||++..
T Consensus       111 ~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~--~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          111 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG--LAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             GGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTT--CEEEECTTCCEEEEECGG
T ss_pred             CCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcce--EEEEECCCCCEEEEEEcc
Confidence                 1111    1238999999999999999999999999988766544433  579999999999999864

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.77  E-value=1.7e-17  Score=149.49  Aligned_cols=178  Identities=17%  Similarity=0.148  Sum_probs=120.9

Q ss_pred             chhhhhhhhhcCCeeeeccCCCCCCCeeecCCccchhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCC
Q 022769           70 GAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED  149 (292)
Q Consensus        70 g~~~~~~~d~dg~~~~~~~~~~~~~a~~~~~p~g~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~  149 (292)
                      +.+...|.||+|+.+++.........    .|..........+++|+|+.|.|+|++++.+|| ++|||++......+++
T Consensus       112 ~g~~~~~~DP~G~~iel~~~~~~~~~----~~~~~~~~~~~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g  186 (323)
T 1f1u_A          112 IGDSVRVEDPLGFPYEFFYETEHVER----LTQRYDLYSAGELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDG  186 (323)
T ss_dssp             BCSEEEEECTTSCEEEEECCBCCCCC----CTTCGGGCCTTCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTC
T ss_pred             cceEEEEECCCCCEEEEEEecccccc----cccccccCCCCCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCC
Confidence            45666788888888888765432110    011100001135789999999999999999999 9999999876554444


Q ss_pred             ceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHH---HHHHHHHcCC--eeecCCeecCCCCeEEEE
Q 022769          150 RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGG--KVTREPGPVKGGNTVIAF  224 (292)
Q Consensus       150 ~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~---~~~~L~~~G~--~i~~~p~~~~~g~~~~~y  224 (292)
                      .....|+..+...+  .+.+....       +.+++|++|.|+|+++   ++++|+++|+  ++..+|..+..+...++|
T Consensus       187 ~~~~~f~~~~~~~~--~~~~~~~~-------~~~~~Hiaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y  257 (323)
T 1f1u_A          187 VTYAAWMHRKQTVH--DTALTGGN-------GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLY  257 (323)
T ss_dssp             CEEEEEEESSSSSC--SEEEEESS-------BSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEE
T ss_pred             cEEEEEEEcCCCcc--cEEEeCCC-------CCCceEEEEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEE
Confidence            44567777654433  34443321       2389999999999888   9999999999  888777777666677899


Q ss_pred             EECCCCCEEEEEEcCCCCCCcee--eeeecCCHHHHHHH
Q 022769          225 IEDPDGYKFELLERGPTPEPLCQ--VMLRVGDLDRAINF  261 (292)
Q Consensus       225 ~~DPdG~~iel~e~~~~~~~l~h--v~l~v~D~~~s~~f  261 (292)
                      ++||+||+||+++.+-....-++  ......+..+...|
T Consensus       258 ~~DPdG~~iE~~~~~~~~~~~~~~~~~w~~~~~~~~~~w  296 (323)
T 1f1u_A          258 ILDPDGHRIEIYTQDYYTGDPDNPTITWDVHDNQRRDWW  296 (323)
T ss_dssp             EECTTCCEEEEEECCCCCCSTTCCCEEEETTCGGGTCTT
T ss_pred             EECCCCCEEEEEeCCEEeeCCCCCCeEEEcCCccccccc
Confidence            99999999999976533211122  33344555544433

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.76  E-value=3.4e-17  Score=130.40  Aligned_cols=125  Identities=21%  Similarity=0.243  Sum_probs=92.0

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeC-----------CCCceEEEEEeeCCCCceEEEEEEe--cCCCC-
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI-----------PEDRYTNAFLGYGPEDSHFVVELTY--NYGVD-  176 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~-----------~~~~~~~~~l~~g~~~~~~~l~l~~--~~~~~-  176 (292)
                      .+++|.|+.|.|+|++++++||++ |||++......           +......+++..+....  .+++..  ..... 
T Consensus         8 ~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~--~l~l~~~~~~~~~~   84 (153)
T 1ss4_A            8 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHS--RIELSRFLTPPTIA   84 (153)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSC--EEEEEEEEESCCCC
T ss_pred             cccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCc--EEEEEEecCCCCcc
Confidence            357899999999999999999999 99999765431           11234556676644322  343433  21111 


Q ss_pred             ----CCcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          177 ----KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       177 ----~~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                          ....+.|++|++|.|+|+++++++|+++|+++..++...++ +.+.+|++||+|+.|||++..
T Consensus        85 ~~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           85 DHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             BCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEEC
T ss_pred             cccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCC-ceEEEEEECCCCCEEEEEecc
Confidence                11234588999999999999999999999999877766553 467889999999999999864

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.76  E-value=8.9e-18  Score=129.14  Aligned_cols=121  Identities=24%  Similarity=0.372  Sum_probs=87.4

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCC---CCCCcCCCceEEEE
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG---VDKYDIGTGFGHFG  188 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~---~~~~~~g~g~~hia  188 (292)
                      +++|+|+.|.|+|++++.+||+++|||++......++.....+++..++.    .+++.....   .+....+.|+.|++
T Consensus         3 ~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~l~l~~~~~~~~~~~~~~~~g~~~~~   78 (126)
T 2p25_A            3 FKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ----ELEIFISDQFPARPSYPEALGLRHLA   78 (126)
T ss_dssp             TSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE----EEEEEECTTCCCCCCSSCCSSCCCEE
T ss_pred             ccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe----EEEEEeccCCCCCCCCCCCccceEEE
Confidence            57899999999999999999999999998765322222222344555432    445544211   11112245788999


Q ss_pred             EeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          189 IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       189 ~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      |.|+|+++++++|+++|+++...+..... +.+.+|++||+|+.|||+|
T Consensus        79 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           79 FKVEHIEEVIAFLNEQGIETEPLRVDDFT-GKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EECSCHHHHHHHHHHTTCCCCCCEECTTT-CCEEEEEECTTCCEEEEEC
T ss_pred             EEeCCHHHHHHHHHHcCCccccccccCCC-CcEEEEEECCCCCEEEeeC
Confidence            99999999999999999998755443333 3477899999999999975

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.76  E-value=1.3e-17  Score=135.25  Aligned_cols=126  Identities=25%  Similarity=0.433  Sum_probs=95.2

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCC------cCCCce
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY------DIGTGF  184 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~------~~g~g~  184 (292)
                      .+++|+||+|.|+|++++++||+++|||++......++.....+++..++    ..+++.........      ..+.|+
T Consensus         5 ~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~----~~l~l~~~~~~~~~~~~~~~~~~~g~   80 (161)
T 3oa4_A            5 KSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGE----SKIELLEPLSEESPIAKFIQKRGEGI   80 (161)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETT----EEEEEEEESSTTSHHHHHHHHHCSEE
T ss_pred             ccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCC----eEEEEEeECCCCChHHHHhhcCCCCe
Confidence            36799999999999999999999999999987655444455667777643    35666554322110      134689


Q ss_pred             EEEEEeeCCHHHHHHHHHHcCCeeecC-CeecCCCCeEEEEE--ECCCCCEEEEEEcCCC
Q 022769          185 GHFGIAVEDVAKTVDLVKAKGGKVTRE-PGPVKGGNTVIAFI--EDPDGYKFELLERGPT  241 (292)
Q Consensus       185 ~hia~~V~Dl~~~~~~L~~~G~~i~~~-p~~~~~g~~~~~y~--~DPdG~~iel~e~~~~  241 (292)
                      +|++|.|+|+++++++|+++|+++..+ +....+ +...+|+  +||||++|||++....
T Consensus        81 ~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~-g~~~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           81 HHIAIGVKSIEERIQEVKENGVQMINDEPVPGAR-GAQVAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             EEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGG-GCEEEEBCGGGTTTCCEEEEECCCC
T ss_pred             EEEEEEECCHHHHHHHHHHCCCEecccCcccCCC-CcEEEEEeccCCCeEEEEEEecCCc
Confidence            999999999999999999999998766 444333 3455667  4999999999998654

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.76  E-value=3.4e-17  Score=152.60  Aligned_cols=162  Identities=15%  Similarity=0.151  Sum_probs=116.4

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCC--CceEEEEEeeCCCCceEEEEEEecCCCC------------
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYNYGVD------------  176 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~l~l~~~~~~~------------  176 (292)
                      .+++|+||.|.|.|++++.+||++.|||++......+.  .....+++..+.    ..+++.......            
T Consensus        28 ~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~----~~l~L~~~~~~~~~~~~~p~~~~~  103 (418)
T 1sp8_A           28 HTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGS----LSFLFTAPYAHGADAATAALPSFS  103 (418)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETT----EEEEEEEECCSSCCGGGCSSTTCC
T ss_pred             cCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCC----EEEEEecCCCCccccccccccccc
Confidence            46799999999999999999999999999987754322  133445555442    345555442210            


Q ss_pred             -C------CcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC---------
Q 022769          177 -K------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------  240 (292)
Q Consensus       177 -~------~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~---------  240 (292)
                       .      ..++.|++|++|+|+|+++++++++++|+++..+|.... +......+++|+|..++|+++..         
T Consensus       104 ~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~-~~~~~~~i~~~Gg~~~~lvd~~~~~~~~~f~p  182 (418)
T 1sp8_A          104 AAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLG-RGFRLAEVELYGDVVLRYVSYPDGAAGEPFLP  182 (418)
T ss_dssp             HHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEE-TTEEEEEEEEETTEEEEEEECCTTGGGSSSST
T ss_pred             chhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEecccccc-CceEEEEEecCCCEEEEEEccCCCCCCcccCC
Confidence             0      013468999999999999999999999999877665432 22334445566666666665420         


Q ss_pred             ----------C---CCCceeeeeecCCHHHHHHHHHHhcCCEEEeeecCC
Q 022769          241 ----------T---PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP  277 (292)
Q Consensus       241 ----------~---~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~  277 (292)
                                .   ..+|+|++++|.|++++.+||+++|||++.+..+.+
T Consensus       183 ~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~  232 (418)
T 1sp8_A          183 GFEGVASPGAADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTE  232 (418)
T ss_dssp             TCEECCCTTCCCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC-
T ss_pred             CCcccCCCCCCCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEeccc
Confidence                      0   126899999999999999999999999999876543

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.76  E-value=2.8e-17  Score=146.70  Aligned_cols=187  Identities=17%  Similarity=0.203  Sum_probs=123.7

Q ss_pred             cchhhhhhhhhcCCeeeeccCCCCCCC--eeecCCccch-hhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEee
Q 022769           69 FGAKALKLLRAEGSTIEASTSGNMAPT--SNTVTEQNVL-DWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRD  145 (292)
Q Consensus        69 ~g~~~~~~~d~dg~~~~~~~~~~~~~a--~~~~~p~g~~-~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~  145 (292)
                      .+.+...|.||+|+.+++.........  .....|.... ......+++|+|+.|.|+|++++++||+++|||++.....
T Consensus       102 ~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~  181 (307)
T 1mpy_A          102 SCGRRVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVL  181 (307)
T ss_dssp             TBCCEEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCCCTTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEE
T ss_pred             CceEEEEEECCCCCEEEEEEcchhcccccccccCCcCCcccCCCCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeee
Confidence            345677789999999999865432211  0000110000 0011357899999999999999999999999999976643


Q ss_pred             CCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCc-eEEEEEeeCC---HHHHHHHHHHcCCeeecCCeecCCCCeE
Q 022769          146 IPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG-FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTV  221 (292)
Q Consensus       146 ~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g-~~hia~~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~  221 (292)
                      ...+.....|+..+...+.  +.+....       ..| ++|++|.|+|   +++++++|+++|+++..+|..+..+..+
T Consensus       182 ~~~~~~~~~~l~~~~~~~~--~~~~~~~-------~~g~~~hi~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~  252 (307)
T 1mpy_A          182 DENGTRVAQFLSLSTKAHD--VAFIHHP-------EKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGK  252 (307)
T ss_dssp             CTTCCEEEEEEESSSBSCS--EEEEECS-------SSSEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCE
T ss_pred             cCCCcEEEEEEEcCCCcee--EEEecCC-------CCCcceEEEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCce
Confidence            2222222346655443322  3333211       124 8999999994   6677899999999987777665544466


Q ss_pred             EEEEECCCCCEEEEEEcCCCCC-CceeeeeecCCHHHHHHHHHH
Q 022769          222 IAFIEDPDGYKFELLERGPTPE-PLCQVMLRVGDLDRAINFYKK  264 (292)
Q Consensus       222 ~~y~~DPdG~~iel~e~~~~~~-~l~hv~l~v~D~~~s~~fY~~  264 (292)
                      ++|++|||||+|||++...... .-..+.....++.+.+.||..
T Consensus       253 ~~~~~DPdG~~iel~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  296 (307)
T 1mpy_A          253 TIYFFDPSGNRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDR  296 (307)
T ss_dssp             EEEEECTTSCEEEEEECCCBCCTTSCCEEEEGGGHHHHHCTTTC
T ss_pred             EEEEECCCCcEEEEEecccccCCCCCCeEeecccccccceecCc
Confidence            8899999999999998753211 112245567888888888864

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.75  E-value=3.2e-17  Score=150.33  Aligned_cols=156  Identities=17%  Similarity=0.173  Sum_probs=114.5

Q ss_pred             chhhhhhhhhcCCeeeeccCCCCCCCeeecCCccchhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCC
Q 022769           70 GAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED  149 (292)
Q Consensus        70 g~~~~~~~d~dg~~~~~~~~~~~~~a~~~~~p~g~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~  149 (292)
                      +..++.|.||+|+.+++..+.........    .........+.+|+||+|.|+|++++.+||++ |||++......+++
T Consensus       112 ~g~~~~f~DPdG~~iEl~~~~~~~~~~~~----~~~~~~~~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g  186 (365)
T 4ghg_A          112 IGDALRVEDPLGFPYEFFFETTHVERLHM----RYDLYSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEG  186 (365)
T ss_dssp             BCSEEEEECTTSCEEEEECCBCCCCCCTT----CTTTCCTTCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTS
T ss_pred             CceEEEEECCCCCEEEEEEEeeccccccc----cccccccccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCC
Confidence            34567788888888888765443221111    01111123478999999999999999999976 99999887766666


Q ss_pred             ceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHH---HHHHHHHcCCe--eecCCeecCCCCeEEEE
Q 022769          150 RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGK--VTREPGPVKGGNTVIAF  224 (292)
Q Consensus       150 ~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~---~~~~L~~~G~~--i~~~p~~~~~g~~~~~y  224 (292)
                      ....+|+.+...++.+.  +...       .+.+++|++|+|+|+++   ++++|+++|+.  +.++|+++..+...++|
T Consensus       187 ~~~~~f~~~~~~hH~la--~~~~-------~~~~lhHvaf~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y  257 (365)
T 4ghg_A          187 TTYAAWMHRKGTVHDTA--LTGG-------NGPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLY  257 (365)
T ss_dssp             CEEEEEEESSSSSCSEE--EEES-------SBSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEE
T ss_pred             ceeEEeeecCCccccee--eecC-------CCCceeEEEEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEE
Confidence            66778888876554443  3332       12489999999998654   57789999984  56778888777888999


Q ss_pred             EECCCCCEEEEEEcC
Q 022769          225 IEDPDGYKFELLERG  239 (292)
Q Consensus       225 ~~DPdG~~iel~e~~  239 (292)
                      |+||+|++||+++.+
T Consensus       258 ~~dP~G~~iE~~t~g  272 (365)
T 4ghg_A          258 ILDPDNHRIEIYTQD  272 (365)
T ss_dssp             EECTTCCEEEEEECC
T ss_pred             EECCCCceEEEEcCC
Confidence            999999999999876

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.75  E-value=2.7e-17  Score=129.09  Aligned_cols=123  Identities=23%  Similarity=0.306  Sum_probs=90.3

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCC--CCC-cCCCceEEE
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--DKY-DIGTGFGHF  187 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~--~~~-~~g~g~~hi  187 (292)
                      .+++|+|+.|.|+|++++++||+++|||++.......++.+..+++. +    ...+.+......  +.. ..+.|+.|+
T Consensus         2 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~----~~~l~l~~~~~~~~~~~~~~~~g~~h~   76 (136)
T 2rk0_A            2 SLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G----GLSIVLREHDGGGTDLFDETRPGLDHL   76 (136)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T----SCEEEEEEETTCSSSCCCTTSSEEEEE
T ss_pred             CCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C----CCEEEEEeCCCCcccCCCCCCCCcceE
Confidence            35789999999999999999999999999987654332234444444 2    234555553221  111 134588999


Q ss_pred             EEee---CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC
Q 022769          188 GIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       188 a~~V---~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                      +|.|   +|+++++++|+++|+++. ++...+.|  +.+|++||||+.|||++..+.
T Consensus        77 ~f~v~~~~d~~~~~~~l~~~G~~~~-~~~~~~~g--~~~~~~DPdG~~iel~~~~~~  130 (136)
T 2rk0_A           77 SFSVESMTDLDVLEERLAKAGAAFT-PTQELPFG--WILAFRDADNIALEAMLGREG  130 (136)
T ss_dssp             EEEESSHHHHHHHHHHHHHHTCCBC-CCEEETTE--EEEEEECTTCCEEEEEEECTT
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCccc-CccccCCc--eEEEEECCCCCEEEEEEcCCC
Confidence            9999   789999999999999986 34444333  789999999999999986543

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.75  E-value=2.3e-17  Score=130.61  Aligned_cols=128  Identities=21%  Similarity=0.338  Sum_probs=93.6

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCC--CceEEEEEEecCCCCCC------cCC-
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE--DSHFVVELTYNYGVDKY------DIG-  181 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~~~l~l~~~~~~~~~------~~g-  181 (292)
                      .+++|+|+.|.|+|++++++||+++|||++......++.....+++..++.  .++..+++.........      ..+ 
T Consensus         6 m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~   85 (148)
T 1jc4_A            6 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNG   85 (148)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTT
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCC
Confidence            467999999999999999999999999999876544433445677776542  12345666654322111      123 


Q ss_pred             -CceEEEEEeeCCHHHHHHHHHHcCCeee-cCCeecCCCCeEEEEE--ECCCCCEEEEEEcC
Q 022769          182 -TGFGHFGIAVEDVAKTVDLVKAKGGKVT-REPGPVKGGNTVIAFI--EDPDGYKFELLERG  239 (292)
Q Consensus       182 -~g~~hia~~V~Dl~~~~~~L~~~G~~i~-~~p~~~~~g~~~~~y~--~DPdG~~iel~e~~  239 (292)
                       .|++|++|.|+|+++++++|+++|+++. .+|.....| ...+|+  +||+|+.|||++.+
T Consensus        86 ~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g-~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           86 RAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGG-NRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSS-CEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCc-eEEEEEeecCCCcEEEEEEecC
Confidence             5889999999999999999999999987 344433333 355666  89999999999864

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.74  E-value=4.6e-17  Score=126.42  Aligned_cols=119  Identities=21%  Similarity=0.339  Sum_probs=89.7

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCC---CCCCcCCCceEEE
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG---VDKYDIGTGFGHF  187 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~---~~~~~~g~g~~hi  187 (292)
                      .+.+|+|+.|.|+|++++++||+++|||++.....    .  .+++..++    ..+.+.....   ......+.+..|+
T Consensus         7 ~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~----~--~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~   76 (133)
T 3ey7_A            7 KISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA----G--RIALEFGH----QKINLHQLGNEFEPKAQNVRVGSADL   76 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT----T--EEEEEETT----EEEEEEETTSCCSSCCTTCCTTCCEE
T ss_pred             EecccCEEEEEECCHHHHHHHHHHccCceEEEecC----C--eEEEEcCC----EEEEEEcCCCCccccCCCCCCCccEE
Confidence            46799999999999999999999999999987631    1  35555543    2444444221   1112234588999


Q ss_pred             EEeeCC-HHHHHHHHHHcCCeeecCCeecCC--CCeEEEEEECCCCCEEEEEEcC
Q 022769          188 GIAVED-VAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       188 a~~V~D-l~~~~~~L~~~G~~i~~~p~~~~~--g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      +|.|+| +++++++|+++|+++..+|...++  +..+.+|++||+|+.|||++..
T Consensus        77 ~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  131 (133)
T 3ey7_A           77 CFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYS  131 (133)
T ss_dssp             EEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESC
T ss_pred             EEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecC
Confidence            999997 999999999999998776655443  2347899999999999999864

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.74  E-value=4.7e-17  Score=129.04  Aligned_cols=115  Identities=24%  Similarity=0.313  Sum_probs=88.5

Q ss_pred             cCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEE
Q 022769          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (292)
Q Consensus       110 ~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~  189 (292)
                      ..+.+|+||.|.|+|++++++||+++|||++.....  +..  .+++..+..  +..+.+.....      ..+..|++|
T Consensus        24 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~--~~~~~~~~~--~~~l~l~~~~~------~~~~~h~~~   91 (141)
T 3ghj_A           24 MNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARR--WNFLWVSGR--AGMVVLQEEKE------NWQQQHFSF   91 (141)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTT--EEEEEETTT--TEEEEEEECCS------SCCCCEEEE
T ss_pred             eeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCc--EEEEEecCC--CcEEEEeccCC------CCCCceEEE
Confidence            357899999999999999999999999999987643  222  355555542  35666665421      236789999


Q ss_pred             eeC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          190 AVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       190 ~V~--Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      .|+  |+++++++|+++|+++. ++.....+..+.+|++|||||.|||++
T Consensus        92 ~v~~~dld~~~~~l~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           92 RVEKSEIEPLKKALESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             EECGGGHHHHHHHHHHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             EEeHHHHHHHHHHHHHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence            997  99999999999999987 344444456688999999999999985

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.74  E-value=6.7e-17  Score=143.75  Aligned_cols=158  Identities=17%  Similarity=0.276  Sum_probs=110.0

Q ss_pred             chhhhhhhhhcCCeeeeccC-CCCCCCeeecCCccchhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCC-
Q 022769           70 GAKALKLLRAEGSTIEASTS-GNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP-  147 (292)
Q Consensus        70 g~~~~~~~d~dg~~~~~~~~-~~~~~a~~~~~p~g~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~-  147 (292)
                      +.....|.||+|+.+++... .......+.   .+...+. ..+++|+|+.|.|+|++++++||+++|||++......+ 
T Consensus       101 ~~~~~~~~DPdG~~iel~~~~~~~~~~~~~---~~~~~~~-~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~  176 (300)
T 2zyq_A          101 VDEMIRFADPSGNCLEVFHGTALEHRRVVS---PYGHRFV-TGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPP  176 (300)
T ss_dssp             CSEEEEEECTTCCEEEEEECCCCCCSCCCC---TTCCCBC-CGGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECG
T ss_pred             ceEEEEEECCCCCEEEEEEcCCcCCCCCcc---CCCcccc-cCCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccc
Confidence            44566799999999999876 322111110   0111111 35789999999999999999999999999987543221 


Q ss_pred             -------CC-ceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHH---HHHHHHHcCCeeecCCeecC
Q 022769          148 -------ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVK  216 (292)
Q Consensus       148 -------~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~---~~~~L~~~G~~i~~~p~~~~  216 (292)
                             ++ .....|+..+...+  .+.+....      ...+++|++|.|+|+++   ++++|+++|+++..+|..++
T Consensus       177 ~~~g~~~~g~~~~~~~~~~~~~~~--~~~~~~~~------~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~  248 (300)
T 2zyq_A          177 QMVGRPADGPPAWLRFFGCNPRHH--SLAFLPMP------TSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHV  248 (300)
T ss_dssp             GGGTCCTTSCCEEEEEEESSSBSC--SEEEESSC------CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEES
T ss_pred             cccccCCCCCceEEEEEEECCCcc--EEEEecCC------CCCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccC
Confidence                   12 23456666544322  33444321      12478999999999655   59999999999987776666


Q ss_pred             CCCeEEEEEECCCCCEEEEEEcC
Q 022769          217 GGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       217 ~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      .+..+++|++||+||+|||++..
T Consensus       249 ~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          249 NDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             SSCCEEEEEECTTSSEEEEEECC
T ss_pred             CCCeEEEEEECCCCCEEEEEeCC
Confidence            55577899999999999999864

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.73  E-value=2.2e-17  Score=133.17  Aligned_cols=121  Identities=25%  Similarity=0.355  Sum_probs=91.9

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCC--------------CCceEEEEEeeCCCCceEEEEEEecCCCC
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP--------------EDRYTNAFLGYGPEDSHFVVELTYNYGVD  176 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~--------------~~~~~~~~l~~g~~~~~~~l~l~~~~~~~  176 (292)
                      .+++|+||+|.|+|++++++||+++|||++......+              +.....+++..++    ..+++.......
T Consensus        16 ~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~----~~leL~~~~~~~   91 (159)
T 3gm5_A           16 DMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGP----LQLELIEPDENP   91 (159)
T ss_dssp             CGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETT----EEEEEEEECSSS
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCC----EEEEEEEECCCC
Confidence            4679999999999999999999999999976543222              2345567776653    456666543222


Q ss_pred             C-C-----cCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCC--CCEEEEEEc
Q 022769          177 K-Y-----DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD--GYKFELLER  238 (292)
Q Consensus       177 ~-~-----~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPd--G~~iel~e~  238 (292)
                      . .     ..+.|++|++|.|+|+++++++|+++|+++..++. .  ++.+++|+.|||  |+.|||+|+
T Consensus        92 ~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~-~--~g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           92 STWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD-F--EGGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             CHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE-E--TTEEEEEESCHHHHSSEEEEEEE
T ss_pred             ChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccc-c--CCeeEEEEeccccCcEEEEEEec
Confidence            1 1     13568999999999999999999999999865532 2  346889999999  999999985

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.73  E-value=5e-17  Score=129.97  Aligned_cols=121  Identities=21%  Similarity=0.307  Sum_probs=89.3

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCC---CCCcCCCceEEE
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV---DKYDIGTGFGHF  187 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~---~~~~~g~g~~hi  187 (292)
                      .+.+|+||.|.|+|++++++||+++|||++.....      ..+++..++    ..+.+......   .......|..|+
T Consensus        20 ~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~g~~hi   89 (152)
T 3huh_A           20 IIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGA----QKINLHQQEMEFEPKASRPTPGSADL   89 (152)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT------TEEEEEETT----EEEEEEETTBCCSSCCSSCCTTCCEE
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC------CeEEEEeCC----eEEEEeccCCcCCCcCcCCCCCccEE
Confidence            46799999999999999999999999999987621      135555543    23444442211   112234578899


Q ss_pred             EEeeC-CHHHHHHHHHHcCCeeecCCeecCCC--CeEEEEEECCCCCEEEEEEcCCC
Q 022769          188 GIAVE-DVAKTVDLVKAKGGKVTREPGPVKGG--NTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       188 a~~V~-Dl~~~~~~L~~~G~~i~~~p~~~~~g--~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                      +|.+. |+++++++|+++|+++..+|...+++  ..+.+|++|||||+|||++..+.
T Consensus        90 ~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  146 (152)
T 3huh_A           90 CFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEG  146 (152)
T ss_dssp             EEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC---
T ss_pred             EEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccC
Confidence            99987 99999999999999987766554432  34789999999999999987654

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.73  E-value=5.3e-17  Score=145.55  Aligned_cols=151  Identities=17%  Similarity=0.278  Sum_probs=112.1

Q ss_pred             ccchhhhhhhhhcCCeeeeccCCCCCCCeeecCCccchhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCC
Q 022769           68 FFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP  147 (292)
Q Consensus        68 ~~g~~~~~~~d~dg~~~~~~~~~~~~~a~~~~~p~g~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~  147 (292)
                      ..+.....|.||+|+.+++..........+. .+      ....+++|+|++|.|+|++++.+||+++|||++.....  
T Consensus       102 ~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~-~~------~~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--  172 (310)
T 3b59_A          102 PGGGYGFRFFSPDGLLFEVSSDVAKGAKRDL-AR------WEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG--  172 (310)
T ss_dssp             TTCCEEEEEECTTSCEEEEEECCCCCCCCCC-CT------TCCCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET--
T ss_pred             cCCceEEEEECCCCCEEEEEEcccccCCCcc-CC------CCCcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC--
Confidence            3456667799999999998765443221111 00      11357899999999999999999999999999976542  


Q ss_pred             CCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHHH---HHHHHHcCCeeecCCeecCCCCeEEEE
Q 022769          148 EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKT---VDLVKAKGGKVTREPGPVKGGNTVIAF  224 (292)
Q Consensus       148 ~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~~---~~~L~~~G~~i~~~p~~~~~g~~~~~y  224 (292)
                      +   ...|+..+...+  .+.+...       . .|++|++|.|+|++++   +++|+++|+++..+|.++..+..+++|
T Consensus       173 ~---~~~fl~~~~~~~--~l~l~~~-------~-~g~~hi~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y  239 (310)
T 3b59_A          173 D---FMCFLRCNSAHH--RIAILPG-------P-PCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSY  239 (310)
T ss_dssp             T---TEEEEESSSBSC--SEEEEES-------S-SEEEEEEEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEE
T ss_pred             C---eEEEEecCCCcc--eEEEECC-------C-CceEEEEEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEE
Confidence            1   246777654333  3444432       1 4799999999997766   999999999998877776666778899


Q ss_pred             EECCCCCEEEEEEcCC
Q 022769          225 IEDPDGYKFELLERGP  240 (292)
Q Consensus       225 ~~DPdG~~iel~e~~~  240 (292)
                      ++||+|+.||+.+...
T Consensus       240 ~~DPdG~~iE~~~~~~  255 (310)
T 3b59_A          240 FVTPGGFVTEYTSELE  255 (310)
T ss_dssp             EECTTSCEEEEEECCC
T ss_pred             EECCCCCEEEEEeCcc
Confidence            9999999999998753

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.73  E-value=9.4e-17  Score=132.76  Aligned_cols=130  Identities=35%  Similarity=0.600  Sum_probs=93.7

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCC---------------CceEEEEEEecCCC
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE---------------DSHFVVELTYNYGV  175 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~---------------~~~~~l~l~~~~~~  175 (292)
                      .+++|+|+.|.|+|++++++||+++|||++......++..+..+++..+..               ..+..+++......
T Consensus        28 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~  107 (184)
T 2za0_A           28 KDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGT  107 (184)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTG
T ss_pred             cceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCC
Confidence            478999999999999999999999999999876543333455566654321               01235555442211


Q ss_pred             ---C--CCc----CCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCCC
Q 022769          176 ---D--KYD----IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  242 (292)
Q Consensus       176 ---~--~~~----~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~~  242 (292)
                         +  .+.    ...|++|++|.|+|+++++++|+++|+++..++...+.+  +.+|++||||+.|||++....+
T Consensus       108 ~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~--~~~~~~DPdG~~iel~~~~~~~  181 (184)
T 2za0_A          108 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMK--GLAFIQDPDGYWIEILNPNKIA  181 (184)
T ss_dssp             GGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSST--TCEEEECTTCCEEEEECTTTGG
T ss_pred             CCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCce--eEEEEECCCCCEEEEEecCccc
Confidence               1  111    124889999999999999999999999988776554332  3589999999999999865433

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.73  E-value=2.2e-17  Score=131.82  Aligned_cols=123  Identities=18%  Similarity=0.260  Sum_probs=90.7

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCC--------CCceEEEEEeeCCCCceEEEEEEecCCCC-----C
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP--------EDRYTNAFLGYGPEDSHFVVELTYNYGVD-----K  177 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~--------~~~~~~~~l~~g~~~~~~~l~l~~~~~~~-----~  177 (292)
                      .+++|+||.|.|+|++++++||+++|||++......+        .+  ..+++..++.   ..+++.......     .
T Consensus        16 ~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~l~l~~~~~~~~~~~~~   90 (156)
T 3kol_A           16 NLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASG--KVANFITPDG---TILDLFGEPELSPPDPNP   90 (156)
T ss_dssp             SSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTT--SEEEEECTTS---CEEEEEECTTCCCSSSST
T ss_pred             ccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCC--cEEEEEeCCC---CEEEEEecCCCCcCCCCC
Confidence            5779999999999999999999999999987632111        11  2356655432   245555432211     1


Q ss_pred             CcCCCceEEEEEeeC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC
Q 022769          178 YDIGTGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       178 ~~~g~g~~hia~~V~--Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                      .....++.|++|.|+  |+++++++|+++|+++..+|.....+  ..+|++|||||.|||++.+.
T Consensus        91 ~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           91 EKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTG--RGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             TCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CC--EEEEEECTTSCEEEEEECCC
T ss_pred             CCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCc--cEEEEECCCCCEEEEEecCC
Confidence            113358899999998  99999999999999987766666443  58999999999999998754

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.73  E-value=2e-16  Score=145.84  Aligned_cols=160  Identities=21%  Similarity=0.315  Sum_probs=121.6

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCC--ceEEEEEeeCCCCceEEEEEEecCCCCC-------CcCC
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGVDK-------YDIG  181 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~l~l~~~~~~~~-------~~~g  181 (292)
                      .+++|+||.|.|.|++++.+||++.|||++......+.+  ......+..++    ..+++..+..+..       ...|
T Consensus         8 ~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~----i~~~L~~p~~p~s~~~a~fl~~hG   83 (393)
T 3isq_A            8 RFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGK----IVFVLSSALNPWNKEMGDHLVKHG   83 (393)
T ss_dssp             EEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETT----EEEEEEEESSTTCHHHHHHHHHHC
T ss_pred             CCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCC----EEEEEecCCCCCchHHHHHHHhcC
Confidence            468999999999999999999999999999886543322  12234454442    4556655322111       1146


Q ss_pred             CceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCC--CCeEEEEEECCCCCEEEEEEcC-------C----C-------
Q 022769          182 TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERG-------P----T-------  241 (292)
Q Consensus       182 ~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~--g~~~~~y~~DPdG~~iel~e~~-------~----~-------  241 (292)
                      .|++|+||+|+|+++++++++++|+++..+|.....  |.....-+++|+|..+.|+++.       |    .       
T Consensus        84 ~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y~~~flpg~~~~~~~~~~~  163 (393)
T 3isq_A           84 DGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPLL  163 (393)
T ss_dssp             SEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSSSCTTCBSCSCCCTTG
T ss_pred             CcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccCcCCCCCCccccccccccc
Confidence            799999999999999999999999999887765533  3346677899999999999752       1    0       


Q ss_pred             ---C----CCceeeeeecCC--HHHHHHHHHHhcCCEEEeee
Q 022769          242 ---P----EPLCQVMLRVGD--LDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       242 ---~----~~l~hv~l~v~D--~~~s~~fY~~~lG~~~~~~~  274 (292)
                         +    .+|+|++++|.|  ++++.+||+++|||++....
T Consensus       164 ~~~~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~  205 (393)
T 3isq_A          164 PKLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSV  205 (393)
T ss_dssp             GGSCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEE
T ss_pred             cCCCCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccc
Confidence               1    158999999998  99999999999999998764

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.73  E-value=8.1e-17  Score=142.66  Aligned_cols=159  Identities=20%  Similarity=0.214  Sum_probs=110.0

Q ss_pred             chhhhhhhhhcCCeeeeccCCCCC-CCeeecCCccchhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCC-
Q 022769           70 GAKALKLLRAEGSTIEASTSGNMA-PTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP-  147 (292)
Q Consensus        70 g~~~~~~~d~dg~~~~~~~~~~~~-~a~~~~~p~g~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~-  147 (292)
                      +.+...|.||+|+.+++....... ...+. .+.+...+ ...+++|+|+.|.|+|++++++||+++|||++......+ 
T Consensus        99 ~~~~~~~~DPdG~~iel~~~~~~~~~~~~~-~~~~~~~~-~~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~  176 (292)
T 1kw3_B           99 VMGLLCLQDPFGLPLEIYYGPAEIFHEPFL-PSAPVSGF-VTGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQM  176 (292)
T ss_dssp             CSEEEEEECTTSCEEEEEECCCBCTTSCCC-CSSSCCCB-CCGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEE
T ss_pred             ceEEEEEECCCCCEEEEEECccccccCCCC-CCCCcccc-ccCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeeccc
Confidence            455667999999999998664422 11111 11111111 145789999999999999999999999999987543211 


Q ss_pred             -CC-ceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHH---HHHHHHHcCCeeecCCeecCCCCeEE
Q 022769          148 -ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVI  222 (292)
Q Consensus       148 -~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~---~~~~L~~~G~~i~~~p~~~~~g~~~~  222 (292)
                       ++ .....|+..+...+  .+.+....      ...+++|++|.|+|+++   ++++|+ +|+++..+|..++.+..++
T Consensus       177 ~~g~~~~~~~~~~~~~~~--~~~~~~~~------~~~~~~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~  247 (292)
T 1kw3_B          177 GPETSVPAHFLHCNGRHH--TIALAAFP------IPKRIHHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLS  247 (292)
T ss_dssp             ETTEEEEEEEEESSSBSC--SEEEECCS------CSSSEEEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEE
T ss_pred             CCCccceEEEEEECCCcc--eEEEecCC------CCCceEEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEE
Confidence             11 22345666543322  23343321      12478999999998654   677999 9999988887776666778


Q ss_pred             EEEECCCCC-EEEEEEcC
Q 022769          223 AFIEDPDGY-KFELLERG  239 (292)
Q Consensus       223 ~y~~DPdG~-~iel~e~~  239 (292)
                      +|++||+|+ +|||++..
T Consensus       248 ~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          248 FYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             EEEECSSTTCEEEEEECC
T ss_pred             EEEECCCCCeeEEEEECC
Confidence            999999999 99999865

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.72  E-value=1.1e-16  Score=125.20  Aligned_cols=115  Identities=16%  Similarity=0.092  Sum_probs=87.3

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      .++++|+.|.|+|++++++||+++|||++.....    .  .+.+..++.   ..+.++....... ....+..|++|.|
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~~---~~l~l~~~~~~~~-~~~~~~~~~~~~v   80 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----R--YVAFPSSGD---ALFAIWSGGEEPV-AEIPRFSEIGIML   80 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----S--EEEEECSTT---CEEEEESSSCCCC-TTSCCCEEEEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----C--EEEEEcCCC---cEEEEEeCCCCCc-CCCCCcceEEEEe
Confidence            5699999999999999999999999999876532    1  233332221   3555655432111 2234788999999


Q ss_pred             CC---HHHHHHHHHH---cCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          192 ED---VAKTVDLVKA---KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       192 ~D---l~~~~~~L~~---~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      +|   +++++++|++   +|+++..+|...+.|  +.+|++|||||+|||++.
T Consensus        81 ~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g--~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           81 PTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG--RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             SSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTE--EEEEEECTTCCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHhhhcCCCEEeeCCcccCce--EEEEEECCCCCEEEEEeC
Confidence            86   9999999999   999998777776554  789999999999999874

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.71  E-value=1.6e-16  Score=141.04  Aligned_cols=159  Identities=19%  Similarity=0.241  Sum_probs=110.0

Q ss_pred             chhhhhhhhhcCCeeeeccCCCCC-CCeeecCCccchhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCC-
Q 022769           70 GAKALKLLRAEGSTIEASTSGNMA-PTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP-  147 (292)
Q Consensus        70 g~~~~~~~d~dg~~~~~~~~~~~~-~a~~~~~p~g~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~-  147 (292)
                      +.....|.||+|+.+++....... ...+ ..|.+...+. ..+++|+|+.|.|+|++++++||+++|||++......+ 
T Consensus        99 ~~~~~~~~DPdG~~iel~~~~~~~~~~~~-~~~~~~~~~~-~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~  176 (297)
T 1lgt_A           99 VTGLITFADPFGLPLEIYYGASEVFEKPF-LPGAAVSGFL-TGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKM  176 (297)
T ss_dssp             CSEEEEEECTTSCEEEEEECCCBCTTSCC-CCSSSCSCBC-CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEE
T ss_pred             ceeEEEEECCCCCEEEEEECccccccCCc-cCCCcccccc-cCccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccC
Confidence            445667899999999998664422 1111 1111111111 35689999999999999999999999999987642211 


Q ss_pred             -CC-ceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHHHH---HHHHHcCCeeecCCeecCCCCeEE
Q 022769          148 -ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV---DLVKAKGGKVTREPGPVKGGNTVI  222 (292)
Q Consensus       148 -~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~~~---~~L~~~G~~i~~~p~~~~~g~~~~  222 (292)
                       ++ .....|+..+...+  .+.+....      ...+++|++|.|+|++++.   ++ +++|+++..+|..++.+...+
T Consensus       177 ~~~~~~~~~~~~~~~~~~--~l~l~~~~------~~~~~~hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~  247 (297)
T 1lgt_A          177 GPDVTVPAYFLHCNERHH--TLAIAAFP------LPKRIHHFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVS  247 (297)
T ss_dssp             ETTEEEEEEEEESSSBSC--SEEEECCC------CSSSEEEEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEE
T ss_pred             CCCccceEEEEEeCCCcc--eEEEEcCC------CCCCceEEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEE
Confidence             11 12346665543322  33444321      1247899999999977766   88 999999988777776666778


Q ss_pred             EEEECCCCCEEEEEEcC
Q 022769          223 AFIEDPDGYKFELLERG  239 (292)
Q Consensus       223 ~y~~DPdG~~iel~e~~  239 (292)
                      +|++|||||+|||++..
T Consensus       248 ~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          248 FYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             EEEECTTSCEEEEEECC
T ss_pred             EEEECCCCcEEEEecCC
Confidence            99999999999999875

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.71  E-value=2.9e-16  Score=123.69  Aligned_cols=123  Identities=21%  Similarity=0.331  Sum_probs=86.4

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      ...+.|+.|.|+|++++++||+++|||++..+... ++.+..+++..+...  +.+++...........+.+++|++|.|
T Consensus         9 ~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~--~~l~l~~~~~~~~~~~~~~~~hi~~~v   85 (139)
T 1twu_A            9 QAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHAD--YHLEFTQYEGGSTAPVPHPDSLLVFYV   85 (139)
T ss_dssp             BCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSSS--EEEEEEEETTCCCCCCCCTTCEEEEEC
T ss_pred             CcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCCc--eEEEEeecCCCCCCCCCCCccEEEEEe
Confidence            34567888999999999999999999998765432 233456677655433  345555433322223445788999999


Q ss_pred             CCH---HHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          192 EDV---AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       192 ~Dl---~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      +|+   ++++++|+++|+++...+........  .|++||||+.|||++..
T Consensus        86 ~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           86 PNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE--EEEECTTCCEEEEESSC
T ss_pred             CCcchHHHHHHHHHHcCCcCcCCCCcccCCCC--eEEECCCCCEEEEEEcC
Confidence            998   99999999999998732221111122  26999999999999864

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.70  E-value=2.9e-16  Score=122.37  Aligned_cols=118  Identities=18%  Similarity=0.267  Sum_probs=85.9

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceE---EEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEE
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYT---NAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~---~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia  188 (292)
                      +++|+|+.|.|+|++++.+||+++|||++.....  ...+.   ..++..++    ..+.+......    ...+.+|++
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~----~~l~l~~~~~~----~~~~~~h~~   71 (133)
T 2p7o_A            2 ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIAG----LWICIMEGDSL----QERTYNHIA   71 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEETT----EEEEEEECSSC----CCCCSCEEE
T ss_pred             CceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeCC----EEEEEecCCCC----CCCCeeEEE
Confidence            5789999999999999999999999999875432  11100   11444432    34555553221    134788999


Q ss_pred             EeeC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC
Q 022769          189 IAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       189 ~~V~--Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                      |.|+  |+++++++|+++|+++..++...++ ..+.+|++||+|+.|||++...
T Consensus        72 ~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~  124 (133)
T 2p7o_A           72 FQIQSEEVDEYTERIKALGVEMKPERPRVQG-EGRSIYFYDFDNHLFELHAGTL  124 (133)
T ss_dssp             EECCGGGHHHHHHHHHHHTCCEECCCCCCTT-CCCEEEEECSSSCEEEEECSSC
T ss_pred             EEcCHHHHHHHHHHHHHCCCcccCCCccCCC-CeeEEEEECCCCCEEEEEcCCh
Confidence            9995  9999999999999999877654433 3467899999999999998654

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.70  E-value=7.7e-17  Score=143.74  Aligned_cols=159  Identities=15%  Similarity=0.179  Sum_probs=107.3

Q ss_pred             chhhhhhhhhcCCeeeeccCCCC-CCCeeecCCccchh-hhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCC
Q 022769           70 GAKALKLLRAEGSTIEASTSGNM-APTSNTVTEQNVLD-WVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP  147 (292)
Q Consensus        70 g~~~~~~~d~dg~~~~~~~~~~~-~~a~~~~~p~g~~~-w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~  147 (292)
                      +.+...|.||+|+.+++...... ....+. .+.+... |. ..+++|+|+.|.|+|++++++|| ++|||++......+
T Consensus       105 ~~~~~~~~DPdG~~iel~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~  181 (302)
T 2ehz_A          105 VLGLMKTEDPGGNPTEIFWGPRIDMSNPFH-PGRPLHGKFV-TGDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIP  181 (302)
T ss_dssp             EEEEEEEECTTSCEEEEEEEECBCTTSCCC-CSSCCSSCBC-CGGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEE
T ss_pred             ceEEEEEECCCCCEEEEEECCCccCCCCcc-CCCCccccee-cCCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEecc
Confidence            34566799999999999865321 111111 0011111 22 45679999999999999999999 99999986432211


Q ss_pred             --CC-ceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHH---HHHHHHHHcCCeeecCCeecCCCCeE
Q 022769          148 --ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGGNTV  221 (292)
Q Consensus       148 --~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~---~~~~~L~~~G~~i~~~p~~~~~g~~~  221 (292)
                        ++ .....|+..+...+  .+.+....      ...+++|++|.|+|++   +++++|+++|+++..+|.....+..+
T Consensus       182 ~~~g~~~~~~~~~~~~~~~--~~~~~~~~------~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~  253 (302)
T 2ehz_A          182 LPNGMTAELSFMHCNARDH--SIAFGAMP------AAKRLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKAL  253 (302)
T ss_dssp             CTTSCEEEEEEEBSSSBSC--SEEECSCC------CSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCE
T ss_pred             CCCCcceEEEEEEeCCCCc--EEEEecCC------CCCceeEEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCce
Confidence              22 23455666543222  23333211      1247899999999866   46779999999998777776655667


Q ss_pred             EEEEECCCCCEEEEEEcC
Q 022769          222 IAFIEDPDGYKFELLERG  239 (292)
Q Consensus       222 ~~y~~DPdG~~iel~e~~  239 (292)
                      ++|++||+|++|||++..
T Consensus       254 ~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          254 TFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             EEEEECTTSSEEEEEECC
T ss_pred             EEEEECCCCcEEEEEECc
Confidence            899999999999999764

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.70  E-value=2.5e-16  Score=120.36  Aligned_cols=115  Identities=20%  Similarity=0.195  Sum_probs=83.7

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      .++|.|+.|.|+|++++++||+++|||++.....    .  .+++..++.    .+.+......+....+.++ |++|.|
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~--~~~~~~~~~----~l~l~~~~~~~~~~~~~~~-~~~~~v   71 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAND----G--FAQFTIGSH----CLMLSQNHLVPLENFQSGI-IIHIEV   71 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----T--EEEEEETTE----EEEEESSCSSSCCCCCSCE-EEEEEC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----C--EEEEEeCCe----EEEEEcCCCCCcccCCCeE-EEEEEE
Confidence            4689999999999999999999999999875421    1  344554432    2233222111111223354 799999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       192 ~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      +|+++++++|+++|+++..+|...+.| .+.+|++||||+.|||++.
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           72 EDVDQNYKRLNELGIKVLHGPTVTDWG-TESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             SCHHHHHHHHHHHTCCEEEEEEECTTS-CEEEEEECGGGCEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCceecCCccccCc-cEEEEEECCCccEEEEEec
Confidence            999999999999999987776666554 4668999999999999874

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.70  E-value=8.9e-17  Score=143.44  Aligned_cols=159  Identities=15%  Similarity=0.212  Sum_probs=107.1

Q ss_pred             hhhhhhhhhcCCeeeeccC-CCCCCCeeecCCccchhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCC--
Q 022769           71 AKALKLLRAEGSTIEASTS-GNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP--  147 (292)
Q Consensus        71 ~~~~~~~d~dg~~~~~~~~-~~~~~a~~~~~p~g~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~--  147 (292)
                      .+...+.||+|+.+++... .......+.. +.+...-....+++|+||.|.|+|++++++|| ++|||++......+  
T Consensus       103 ~~~~~~~DPdG~~iel~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~  180 (305)
T 2wl9_A          103 LGLVKLHDPGGNPTEIFYGPQVDTSSPFHP-GRPMFGKFVTEGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALP  180 (305)
T ss_dssp             EEEEEEECTTCCEEEEEEEECBCTTSCCCC-SSCCSSCBCCTTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECT
T ss_pred             EEEEEEECCCCCEEEEEECCCccCCCCcCC-CCCcccceecCCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccC
Confidence            4556789999999999765 2211111110 00100001135789999999999999999999 99999986532111  


Q ss_pred             CC-ceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEE
Q 022769          148 ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIA  223 (292)
Q Consensus       148 ~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~  223 (292)
                      ++ .....|+..+...+.  +.+....      ...+++|++|.|+|   +++++++|+++|+++..+|..+..+...++
T Consensus       181 ~g~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~  252 (305)
T 2wl9_A          181 NGAVGTPVFMHCNDRHHS--LAFGVGP------MDKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTF  252 (305)
T ss_dssp             TSCEECCEEEESSSSSCS--EEECCSC------CSSSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEE
T ss_pred             CCccceEEEEEcCCCceE--EEEecCC------CCCCceEEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEE
Confidence            11 223456665543332  3333211      12488999999998   566888999999999877777665566789


Q ss_pred             EEECCCCCEEEEEEcC
Q 022769          224 FIEDPDGYKFELLERG  239 (292)
Q Consensus       224 y~~DPdG~~iel~e~~  239 (292)
                      |++|||||+|||++.+
T Consensus       253 y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          253 YCANPSGWLWEPGWGS  268 (305)
T ss_dssp             EEECTTSSEEEEEECC
T ss_pred             EEECCCCCEEEEEeCC
Confidence            9999999999999865

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.70  E-value=4.5e-16  Score=121.66  Aligned_cols=117  Identities=21%  Similarity=0.275  Sum_probs=84.8

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      .++|+||.|.|+|++++++||+++|||++.....    .  .+.+..++  ..+.+........ +  ...+..|++|.+
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~--~~~~~~~g--~~~~l~~~~~~~~-~--~~~~~~h~~~~~   75 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----D--RITLDFFG--DQLVCHLSDRWDR-E--VSMYPRHFGITF   75 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----T--EEEEEETT--EEEEEEECSCSCS-S--CCSSSCEEEEEC
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----C--cEEEEEeC--CEEEEEEcCcccc-c--CCCCCCeEEEEE
Confidence            5789999999999999999999999999965532    1  23444322  2233333222111 1  233678999988


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeec---CCCCeEEEEEECCCCCEEEEEEcC
Q 022769          192 E---DVAKTVDLVKAKGGKVTREPGPV---KGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       192 ~---Dl~~~~~~L~~~G~~i~~~p~~~---~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      .   |+++++++|+++|+++..+|...   ..+..+.+|++|||||.|||.+..
T Consensus        76 ~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~  129 (135)
T 3rri_A           76 RDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYF  129 (135)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEES
T ss_pred             cChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEEC
Confidence            6   59999999999999987666553   134567899999999999999764

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.69  E-value=3.3e-16  Score=121.12  Aligned_cols=117  Identities=16%  Similarity=0.225  Sum_probs=86.2

Q ss_pred             CccceEEEEEEc--CCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEE
Q 022769          111 DKRRMLHVVYRV--GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (292)
Q Consensus       111 ~i~~i~Hv~L~V--~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia  188 (292)
                      .+.+|+|+.|.|  +|++++.+||+++|||++..+.....+ ....++..++    ..+.+......    ...+..|++
T Consensus         7 ~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~----~~l~l~~~~~~----~~~~~~~~~   77 (126)
T 2qqz_A            7 YIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKK-RGGCWFKCGN----QEIHIGVEQNF----NPAKRAHPA   77 (126)
T ss_dssp             CEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGG-GCCEEEEETT----EEEEEEECTTC----CCCSSSCEE
T ss_pred             ccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccC-CCceEEEeCC----EEEEEEecCCC----CCCCceEEE
Confidence            366899999999  899999999999999998765321100 0125565543    24445443211    123778999


Q ss_pred             EeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          189 IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       189 ~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      |.|+|+++++++|+++|+++..++.   ..+.+.+|++||||+.|||++..
T Consensus        78 f~v~d~~~~~~~l~~~G~~~~~~~~---~~g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           78 FYVLKIDEFKQELIKQGIEVIDDHA---RPDVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EEETTHHHHHHHHHHTTCCCEEECS---STTEEEEEEECTTSCEEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHcCCCccCCCC---CCCeeEEEEECCCCCEEEEEeCC
Confidence            9999999999999999999876652   22467899999999999999853

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.69  E-value=2e-16  Score=124.69  Aligned_cols=118  Identities=16%  Similarity=0.253  Sum_probs=84.3

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCce-EEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRY-TNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      +++|+|+.|.|+|++++.+||+++|||++........-.. ...++..++    ..+.+......+    ..+..|++|.
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g~----~~l~l~~~~~~~----~~~~~h~~~~   73 (139)
T 1r9c_A            2 IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD----IWVAIMQGEKLA----ERSYNHIAFK   73 (139)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETT----EEEEEEECCCCS----SCCSCEEEEE
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEEECC----EEEEEEeCCCCC----CCCeeEEEEE
Confidence            5689999999999999999999999999877543111000 001444432    345555432211    3478899999


Q ss_pred             eC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          191 VE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       191 V~--Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      |+  |+++++++|+++|+++..++...++ ..+.+|++|||||.|||++.
T Consensus        74 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~  122 (139)
T 1r9c_A           74 IDDADFDRYAERVGKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTG  122 (139)
T ss_dssp             CCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             cCHHHHHHHHHHHHHCCCcccCCcccCCC-CeEEEEEECCCCCEEEEEeC
Confidence            99  9999999999999998766554433 45678999999999999975

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.69  E-value=2.5e-16  Score=126.10  Aligned_cols=120  Identities=15%  Similarity=0.114  Sum_probs=85.3

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCC-CcCCCceEEEEEe
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFGHFGIA  190 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-~~~g~g~~hia~~  190 (292)
                      +++|+|+.|.|+|++++++||+++|||++.....    .  .+++..+++   ..+.+........ .....+..|++|.
T Consensus         4 ~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~--~~~~~~~~g---~~l~l~~~~~~~~~~~~~~~~~~l~f~   74 (148)
T 3rhe_A            4 LSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----T--FAMFVMKTG---LRLGLWAQEEIEPKAHQTGGGMELSFQ   74 (148)
T ss_dssp             ---CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----S--EEEEECTTS---CEEEEEEGGGCSSCCC----CEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----C--EEEEEcCCC---cEEEEecCCcCCccccCCCCeEEEEEE
Confidence            5689999999999999999999999999876532    1  345554322   3455544322211 1223466799999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCCC
Q 022769          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  242 (292)
Q Consensus       191 V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~~  242 (292)
                      |+|   +++++++|+++|+++..+|...+.|  +.+|++||+|+.|||++..+..
T Consensus        75 v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~a  127 (148)
T 3rhe_A           75 VNSNEMVDEIHRQWSDKEISIIQPPTQMDFG--YTFVGVDPDEHRLRIFCLKRTA  127 (148)
T ss_dssp             CSCHHHHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCCEEEEEEEC---
T ss_pred             cCCHHHHHHHHHHHHhCCCEEEeCCeecCCC--cEEEEECCCCCEEEEEEcChhH
Confidence            987   9999999999999998777776654  7899999999999999876543

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.69  E-value=2.3e-16  Score=144.21  Aligned_cols=154  Identities=14%  Similarity=0.120  Sum_probs=112.0

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCC----CcCCCceEE
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK----YDIGTGFGH  186 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~----~~~g~g~~h  186 (292)
                      .+++++||.+.|+|++++.+|| +.|||+++.+....  .  ...+..+.    +.+.+........    ...+.++.|
T Consensus         9 ~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~--~--~~l~~~g~----~~l~l~~~~~~~~~~~~~~~g~gv~~   79 (357)
T 1cjx_A            9 GLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK--N--VHLYRQGE----INLILNNEPNSIASYFAAEHGPSVCG   79 (357)
T ss_dssp             CEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS--S--EEEEEETT----EEEEEECCSSSHHHHHHHHHSSEEEE
T ss_pred             ccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe--e--EEEEecCC----EEEEEECCCCchhhhhhhhcCCeEEE
Confidence            4789999999999999999999 79999998764321  1  23333332    4455554222110    023569999


Q ss_pred             EEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC------------------CC-----C
Q 022769          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP------------------TP-----E  243 (292)
Q Consensus       187 ia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~------------------~~-----~  243 (292)
                      ++|+|+|+++++++++++|+++..++..  .|......+++|+|..++|+++..                  .+     .
T Consensus        80 iaf~V~D~~~~~~~l~~~G~~~~~~~~~--~g~~~~~~~~~~gg~~~~~vd~~~~~~~~~~~~f~~~~~~~~~~~~~~i~  157 (357)
T 1cjx_A           80 MAFRVKDSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGEGSSIYDIDFVYLEGVERNPVGAGLK  157 (357)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSSSCCHHHHHEEECTTCCSSCCTTSEE
T ss_pred             EEEEeCCHHHHHHHHHHcCCEEeecCCC--CCcEEEEeeeCCCCeEEEEECCCCCCCCcCCCCcccCCccccCCCCCCee
Confidence            9999999999999999999988665432  123334557788888888775431                  01     1


Q ss_pred             CceeeeeecC--CHHHHHHHHHHhcCCEEEeeec
Q 022769          244 PLCQVMLRVG--DLDRAINFYKKAFGMELLRKRD  275 (292)
Q Consensus       244 ~l~hv~l~v~--D~~~s~~fY~~~lG~~~~~~~~  275 (292)
                      +|+|+++.|.  |++++.+||+++|||++.+..+
T Consensus       158 ~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~  191 (357)
T 1cjx_A          158 VIDHLTHNVYRGRMVYWANFYEKLFNFREARYFD  191 (357)
T ss_dssp             EEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             EECceEEeechhhHHHHHHHHHHhhCCceeeEEE
Confidence            5889999999  9999999999999999987653

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.68  E-value=3.9e-16  Score=124.39  Aligned_cols=118  Identities=22%  Similarity=0.315  Sum_probs=85.3

Q ss_pred             cCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCC---CCCCcCCCceEE
Q 022769          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG---VDKYDIGTGFGH  186 (292)
Q Consensus       110 ~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~---~~~~~~g~g~~h  186 (292)
                      ..+.+|+||.|.|+|++++++||+++|||++.....    .  ..++..++.    .+.+.....   +.......|..|
T Consensus        23 m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~--~~~l~~g~~----~l~l~~~~~~~~~~~~~~~~g~~~   92 (147)
T 3zw5_A           23 MLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE----D--RKALCFGDQ----KFNLHEVGKEFEPKAAHPVPGSLD   92 (147)
T ss_dssp             TSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT----T--EEEEEETTE----EEEEEETTSCCSSCCSSCCTTCCE
T ss_pred             eecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC----C--ceEEEECCc----EEEEEEcCCCcCcccCCCCCCCce
Confidence            357899999999999999999999999999985421    1  244555432    333333211   111123447788


Q ss_pred             EEEeeC-CHHHHHHHHHHcCCeeecCCeecCC--CCeEEEEEECCCCCEEEEEE
Q 022769          187 FGIAVE-DVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       187 ia~~V~-Dl~~~~~~L~~~G~~i~~~p~~~~~--g~~~~~y~~DPdG~~iel~e  237 (292)
                      ++|.+. |+++++++|+++|+++..+|....+  +..+.+||+||||++|||++
T Consensus        93 ~~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           93 ICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             EEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             EEEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            999886 9999999999999998755544332  33468999999999999986

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.68  E-value=9.9e-16  Score=120.02  Aligned_cols=112  Identities=22%  Similarity=0.378  Sum_probs=84.7

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      +++|+|+.|.|+|++++.+||+++|||++.....  .    ..++..++    ..+.+......  .....+..|++|.|
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~~~~----~~l~l~~~~~~--~~~~~~~~h~~~~v   69 (135)
T 1nki_A            2 LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q----GAYLELGS----LWLCLSREPQY--GGPAADYTHYAFGI   69 (135)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEEETT----EEEEEEECTTC--CCCCSSSCEEEEEE
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C----ceEEecCC----EEEEEEeCCCC--CCCCCCcceEEEEc
Confidence            5689999999999999999999999999976532  1    24555543    23445443211  12234788999999


Q ss_pred             C--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          192 E--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       192 ~--Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      +  |+++++++|+++|+++..++..    ..+.+|++||+||.|||++..
T Consensus        70 ~~~d~~~~~~~l~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           70 AAADFARFAAQLRAHGVREWKQNRS----EGDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEECCCS----SSCEEEEECTTCCEEEEESCC
T ss_pred             cHHHHHHHHHHHHHCCCceecCCCC----CeEEEEEECCCCCEEEEEECC
Confidence            7  9999999999999998765432    235789999999999999653

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.68  E-value=3.5e-16  Score=124.53  Aligned_cols=117  Identities=18%  Similarity=0.225  Sum_probs=88.0

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCC-cCCCceEEEEEe
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY-DIGTGFGHFGIA  190 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~-~~g~g~~hia~~  190 (292)
                      .++|.|+.|.|+|++++++||+++|||++.....    .  .+++..++ .  ..+.+.......+. ..+.+..|++|.
T Consensus        23 m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~--~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~~~~hl~f~   93 (144)
T 2kjz_A           23 MTHPDFTILYVDNPPASTQFYKALLGVDPVESSP----T--FSLFVLAN-G--MKLGLWSRHTVEPKASVTGGGGELAFR   93 (144)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET----T--EEEEECTT-S--CEEEEEETTSCSSCCCCSSSSCEEEEE
T ss_pred             cCceeEEEEEeCCHHHHHHHHHHccCCEeccCCC----C--eEEEEcCC-C--cEEEEEeCCCCCCccCCCCCceEEEEE
Confidence            4599999999999999999999999999876541    1  24455443 2  34555543322111 223478899999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          191 VE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       191 V~---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      |+   |+++++++|+++|+++..+|...+.|  +.+|++||+|+.|||++..
T Consensus        94 v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           94 VENDAQVDETFAGWKASGVAMLQQPAKMEFG--YTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCCCSCCEEETTE--EEEEECCTTCCEEEEEEEC
T ss_pred             eCCHHHHHHHHHHHHHCCCeEecCceecCCc--eEEEEECCCCCEEEEEecC
Confidence            97   48999999999999988777766543  7789999999999999753

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.68  E-value=2.4e-16  Score=120.39  Aligned_cols=113  Identities=19%  Similarity=0.245  Sum_probs=84.7

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      +.++ |+.|.|+|++++.+||+++|||++....    +.  .+++..+. ...+.+.+.....     ...+..|++|.|
T Consensus         6 i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~~--~~~~~~~~-~~~~~l~l~~~~~-----~~~~~~~~~~~v   72 (119)
T 2pjs_A            6 VRRV-VANIATPEPARAQAFYGDILGMPVAMDH----GW--IVTHASPL-EAHAQVSFAREGG-----SGTDVPDLSIEV   72 (119)
T ss_dssp             EEEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC----SS--EEEEEEEE-EEEEEEEEESSSB-----TTBCCCSEEEEE
T ss_pred             eeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC----CE--EEEEecCC-CCcEEEEEEcCCC-----CCCceeEEEEEE
Confidence            5678 9999999999999999999999987642    11  23343321 1134455554321     123567999999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       192 ~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      +|+++++++|+++|+++..++...+.| .+.+|++||+|+.|||++.
T Consensus        73 ~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           73 DNFDEVHARILKAGLPIEYGPVTEAWG-VQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             SCHHHHHHHHHHTTCCCSEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCccccCCccCCCc-cEEEEEECCCCCEEEEEec
Confidence            999999999999999987766666544 5778999999999999975

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.67  E-value=1.5e-15  Score=119.82  Aligned_cols=114  Identities=24%  Similarity=0.394  Sum_probs=85.5

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCC-CCCcCCCceEEEEEe
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-DKYDIGTGFGHFGIA  190 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~-~~~~~g~g~~hia~~  190 (292)
                      +++|+|+.|.|+|++++++||+++|||++.....  .    ..++..++    ..+.+...... .......+..|++|.
T Consensus         2 i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~hi~~~   71 (141)
T 1npb_A            2 LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T----GAYLTCGD----LWVCLSYDEARQYVPPQESDYTHYAFT   71 (141)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T----EEEEEETT----EEEEEEECTTCCCCCGGGSCSCEEEEE
T ss_pred             CceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C----cEEEEECC----EEEEEEECCCCCCCCCCCCCceEEEEE
Confidence            5789999999999999999999999999977642  1    24565543    23444443211 111223478899999


Q ss_pred             eC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          191 VE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       191 V~--Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      |+  |+++++++|+++|+++..++.  .  ..+.+|++||+|+.|||++..
T Consensus        72 v~~~d~~~~~~~l~~~G~~~~~~~~--~--~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           72 VAEEDFEPLSQRLEQAGVTIWKQNK--S--EGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCC--S--SSEEEEEECTTCCEEEEEECC
T ss_pred             eCHHHHHHHHHHHHHCCCeEeccCC--C--ceeEEEEECCCCCEEEEEECc
Confidence            96  899999999999999876543  2  346789999999999999764

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.67  E-value=5.1e-16  Score=117.57  Aligned_cols=108  Identities=21%  Similarity=0.294  Sum_probs=82.0

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee-
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV-  191 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V-  191 (292)
                      ++|+|+.|.|+|++++.+||+++|||++.....   ..  .+++..++   +..+.+......    ...+..|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~~--~~~~~~~~---~~~l~l~~~~~~----~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---NA--FAVMRDND---GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---TT--EEEEECTT---CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---Cc--EEEEEcCC---CcEEEEEeCCCC----CCCceeEEEEEcC
Confidence            689999999999999999999999999876532   12  35555443   234556553321    124688999999 


Q ss_pred             --CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEE
Q 022769          192 --EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (292)
Q Consensus       192 --~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~  236 (292)
                        +|+++++++|+++|+++. +|...  + .+.+|++|||||.||++
T Consensus        70 ~~~d~~~~~~~l~~~G~~~~-~p~~~--~-~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRLKEDGFLVE-PPKHA--H-AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCC-CCEEC----CEEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCEEe-cCcCC--C-cEEEEEECCCCcEEEEe
Confidence              789999999999999975 34432  2 57899999999999996

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.67  E-value=7.9e-16  Score=119.98  Aligned_cols=119  Identities=18%  Similarity=0.198  Sum_probs=80.7

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      ...|+||.|.|+|++++++||++ |||++...... .+.+  +++...+ .  ..+.+......  .....+..|++|.|
T Consensus         4 ~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~-~~~~--~~~~~~~-~--~~l~l~~~~~~--~~~~~~~~~l~f~v   74 (128)
T 3g12_A            4 SLLITSITINTSHLQGMLGFYRI-IGFQFTASKVD-KGSE--VHRAVHN-G--VEFSLYSIQNP--QRSQIPSLQLGFQI   74 (128)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CC--EEEEEET-T--EEEEEEECCCC--SSCCCCSEEEEEEE
T ss_pred             cceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCC-CCCE--EEEEeCC-C--eEEEEEECCCC--cCCCCCceEEEEEe
Confidence            45799999999999999999999 99998765211 1122  3333111 1  23444332221  11222456899999


Q ss_pred             CCHHHHHHHHHHcCCe-eecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC
Q 022769          192 EDVAKTVDLVKAKGGK-VTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       192 ~Dl~~~~~~L~~~G~~-i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                      +|+++++++|+++|++ +..+|...++| .. ++++|||||+|||.+.++.
T Consensus        75 ~dvd~~~~~l~~~G~~~~~~~p~~~~~G-~~-~~~~DPdGn~iel~~~~~~  123 (128)
T 3g12_A           75 TDLEKTVQELVKIPGAMCILDPTDMPDG-KK-AIVLDPDGHSIELCELEGH  123 (128)
T ss_dssp             SCHHHHHHHHTTSTTCEEEEEEEECC-C-EE-EEEECTTCCEEEEEC----
T ss_pred             CCHHHHHHHHHHCCCceeccCceeCCCc-cE-EEEECCCCCEEEEEEeccc
Confidence            9999999999999999 77666666654 34 8999999999999987643

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.67  E-value=1.7e-15  Score=137.15  Aligned_cols=160  Identities=20%  Similarity=0.132  Sum_probs=104.8

Q ss_pred             cchhhhhhhhhcCCeeeeccCCCCCCCeeecCCccchhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCC
Q 022769           69 FGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE  148 (292)
Q Consensus        69 ~g~~~~~~~d~dg~~~~~~~~~~~~~a~~~~~p~g~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~  148 (292)
                      .|.+...|.||||+.+++.............+..+... ....+++|+|+.|.|+|++++++||+++|||++.....   
T Consensus       136 ~G~~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~~~~~-~~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~---  211 (338)
T 1zsw_A          136 ANRPALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVP-AKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND---  211 (338)
T ss_dssp             TTEEEEEEECTTCCEEEEEECTTCCCTTCCCCTTCSSC-GGGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS---
T ss_pred             CCcEEEEEECCCCCEEEEEEcCCccccccCcCcCCCCC-ccccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC---
Confidence            35567789999999999986643211000000001101 12457899999999999999999999999999976642   


Q ss_pred             CceEEEEEeeCC-CCceEEEEEEecCCCCCCcCCCceEEEEEeeC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEE
Q 022769          149 DRYTNAFLGYGP-EDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF  224 (292)
Q Consensus       149 ~~~~~~~l~~g~-~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y  224 (292)
                       .+  +.+..+. ......+.+....... .....+++|++|.|+   |+++++++|+++|+++. ++...  ++.+.+|
T Consensus       212 -~~--~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~-~~~~~--~~~~~~~  284 (338)
T 1zsw_A          212 -QE--AIFQSIKGEAFGEIVVKYLDGPTE-KPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDR--FYFKSLY  284 (338)
T ss_dssp             -SE--EEEESSTTCSTTCEEEEECCSSBC-BCCBTCEEEEEEEESSHHHHHHHHHHHHHTTCCCC-CCEEC--SSEEEEE
T ss_pred             -Ce--EEEEecCCCCceEEEEeccCCCCC-CCCCCceEEEEEEeCCHHHHHHHHHHHHHCCCcee-eeeec--CceEEEE
Confidence             12  3333321 1100122222211111 111236899999999   69999999999999985 44443  4678899


Q ss_pred             EECCCCCEEEEEEcC
Q 022769          225 IEDPDGYKFELLERG  239 (292)
Q Consensus       225 ~~DPdG~~iel~e~~  239 (292)
                      |+||||+.|||++..
T Consensus       285 ~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          285 FRESNGILFEIATDG  299 (338)
T ss_dssp             EECTTCCEEEEEEEE
T ss_pred             EECCCCCEEEEEEcC
Confidence            999999999999865

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.66  E-value=3.7e-16  Score=124.61  Aligned_cols=117  Identities=20%  Similarity=0.247  Sum_probs=85.0

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      ++++. +.|.|+|++++++||+++|||++..+...++..+...++  +.      +.+.......  ....+..|++|.|
T Consensus         5 i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~--~~------~~l~~~~~~~--~~~~~~~hl~f~V   73 (144)
T 3r6a_A            5 ILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQI--ST------ILLIAGSEEA--LKPFRNTQATFLV   73 (144)
T ss_dssp             EEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEE--TT------EEEEESCHHH--HGGGGGCCEEEEE
T ss_pred             EEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEe--cc------EEEecCCccc--CCCCcceEEEEEe
Confidence            55677 999999999999999999999987764433333333332  21      2233321110  0112457999999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC
Q 022769          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       192 ~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                      +|+++++++|+++|+++..+|...+.|  +.+|++||||+.|||++..+.
T Consensus        74 ~d~d~~~~~l~~~G~~v~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~  121 (144)
T 3r6a_A           74 DSLDKFKTFLEENGAEIIRGPSKVPTG--RNMTVRHSDGSVIEYVEHSKI  121 (144)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEEETTE--EEEEEECTTSCEEEEEEECC-
T ss_pred             CCHHHHHHHHHHcCCEEecCCccCCCc--eEEEEECCCCCEEEEEEcCCc
Confidence            999999999999999998777766654  678999999999999997654

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.66  E-value=1.1e-15  Score=120.24  Aligned_cols=119  Identities=18%  Similarity=0.163  Sum_probs=87.0

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecC------CCCCCcCCCceE
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY------GVDKYDIGTGFG  185 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~------~~~~~~~g~g~~  185 (292)
                      +++|.|+.|.|+|++++++||++ |||++.....  ...  .+.+..++ .  ..+.+....      +......+.+..
T Consensus         2 ~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~--~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~~~~~~~~~   73 (138)
T 2a4x_A            2 SARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAP--HTEAVLDG-G--IRLAWDTVETVRSYDPEWQAPTGGHRF   73 (138)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCS--EEEEECTT-S--CEEEEEEHHHHHHHCTTCCCCBSSCSE
T ss_pred             cceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCc--eEEEEcCC-C--eEEEEecCccchhhCcccCCCCCCCeE
Confidence            46899999999999999999998 9999865432  112  23333322 2  345554421      111112335788


Q ss_pred             EEEEeeC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          186 HFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       186 hia~~V~---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      |++|.|+   |+++++++|+++|+++..+|...+.| .+.+|++||+|+.|||++..
T Consensus        74 ~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           74 AIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWG-QRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTT-EEEEEEECTTCCEEEEEEEC
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCC-cEEEEEECCCCCEEEEEeCC
Confidence            9999999   89999999999999988777666554 57899999999999999876

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.65  E-value=4.1e-15  Score=134.50  Aligned_cols=119  Identities=24%  Similarity=0.431  Sum_probs=89.9

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~  192 (292)
                      ..+.|+.|.|+|++++.+||+++|||++.......+    .+++..++..  +.+++.....  ....+.++.|++|.|+
T Consensus       158 ~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~~----~~~l~~g~~~--~~l~l~~~~~--~~~~~~~~~hiaf~v~  229 (330)
T 3zi1_A          158 DPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQ----RALLGYADNQ--CKLELQGVKG--GVDHAAAFGRIAFSCP  229 (330)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTTT----EEEEESSTTS--CEEEEEECSS--CCCCBTTCCEEEEEEC
T ss_pred             CceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCCc----EEEEEeCCce--EEEEECCCCC--CCCCCCCCceEEEEEE
Confidence            468899999999999999999999999987754322    4667766543  3455544322  1223457889999996


Q ss_pred             --CHHHHHHHHHHcCCeeecCCeec--C-CCCeEEEEEECCCCCEEEEEEcC
Q 022769          193 --DVAKTVDLVKAKGGKVTREPGPV--K-GGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       193 --Dl~~~~~~L~~~G~~i~~~p~~~--~-~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                        |+++++++|+++|+++..++...  + ..+.+++||+||||+.|||++..
T Consensus       230 ~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~  281 (330)
T 3zi1_A          230 QKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDE  281 (330)
T ss_dssp             GGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHH
T ss_pred             cccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEec
Confidence              79999999999999987665543  1 23557899999999999999863

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.65  E-value=8.4e-16  Score=124.36  Aligned_cols=118  Identities=19%  Similarity=0.212  Sum_probs=86.7

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCC--------CCCcCCC
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--------DKYDIGT  182 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~--------~~~~~g~  182 (292)
                      .+.+|+||.|.|+|++++++||+++|||++......     ..+++..+.    ..+.+......        .....+.
T Consensus         5 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~~   75 (160)
T 3r4q_A            5 PPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGR----QMLLLFDPQESSRADANNPIPRHGAV   75 (160)
T ss_dssp             CCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETT----EEEEEECHHHHTCCCTTCCSCCCEEE
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCC----EEEEEEecCCccCccccCCCCcCCCc
Confidence            467999999999999999999999999999876431     235555543    23333331110        1111234


Q ss_pred             ceEEEEEee---CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          183 GFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       183 g~~hia~~V---~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      |+.|++|.|   +|+++++++|+++|+++..++. .+ ++.+.+|++||||+.|||++.+
T Consensus        76 g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~-~~-~g~~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           76 GQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHR-WP-NGSYSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             EECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEE-CT-TSCEEEEEECTTCCEEEEEEGG
T ss_pred             ceeEEEEEeCCHHHHHHHHHHHHHCCCEEecccc-cc-CCcEEEEEECCCCCEEEEEeCC
Confidence            778999999   7899999999999999864332 22 3467899999999999999976

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.65  E-value=2.6e-15  Score=119.63  Aligned_cols=117  Identities=21%  Similarity=0.376  Sum_probs=86.5

Q ss_pred             CccceEEEEEEcCCHHHHHHHH---HHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCC---CCCCc-CCCc
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFY---TECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG---VDKYD-IGTG  183 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY---~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~---~~~~~-~g~g  183 (292)
                      .+++|+|+.|.|+|++++++||   +++|||++.....  .   ...|+. +.    ..+.+.....   ..+.. ...|
T Consensus        17 ~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~---~~~~~~-g~----~~l~l~~~~~~~~~~~~~~~~~g   86 (146)
T 3ct8_A           17 FQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--R---GKSYKH-GK----TYLVFVQTEDRFQTPTFHRKRTG   86 (146)
T ss_dssp             TTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--T---EEEEEE-TT----EEEEEEECCGGGSCSCCCTTSSS
T ss_pred             cccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--C---CceEec-CC----eEEEEEEcCCCcccccccccCCC
Confidence            4679999999999999999999   9999999977642  1   123554 32    3556655322   11111 2347


Q ss_pred             eEEEEEeeC---CHHHHHHHHHHcCCeeec-CCeecCCC-CeEEEEEECCCCCEEEEEE
Q 022769          184 FGHFGIAVE---DVAKTVDLVKAKGGKVTR-EPGPVKGG-NTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       184 ~~hia~~V~---Dl~~~~~~L~~~G~~i~~-~p~~~~~g-~~~~~y~~DPdG~~iel~e  237 (292)
                      +.|++|.|+   |+++++++|+++|+++.. +|...+.+ ..+.+|++||||+.|||++
T Consensus        87 ~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~  145 (146)
T 3ct8_A           87 LNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVA  145 (146)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEEC
T ss_pred             ceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEe
Confidence            889999999   899999999999999876 35444332 3567899999999999985

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.65  E-value=3.1e-15  Score=119.57  Aligned_cols=116  Identities=19%  Similarity=0.280  Sum_probs=84.8

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCc--------eEEEEEEecCCCCCCcCCCc
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS--------HFVVELTYNYGVDKYDIGTG  183 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~--------~~~l~l~~~~~~~~~~~g~g  183 (292)
                      ..+|.|+.|.|+|++++++||+++|||++....   +..  .+++..++..-        .....+.....      ..+
T Consensus        23 ~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~~--~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~------~~g   91 (148)
T 2r6u_A           23 TGRIVHFEIPFDDGDRARAFYRDAFGWAIAEIP---DMD--YSMVTTGPVGESGMPDEPGYINGGMMQRGE------VTT   91 (148)
T ss_dssp             CCCEEEEEEEESSHHHHHHHHHHHHCCEEEEET---TTT--EEEEECSCBCTTSSBCSSSCBCEEEEESSS------SCS
T ss_pred             CCceEEEEEEeCCHHHHHHHHHHccCcEEEECC---CCC--EEEEEeCCcceeecccCCcccccceeecCC------CCe
Confidence            458999999999999999999999999997631   222  34555443210        01122222111      135


Q ss_pred             eEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC
Q 022769          184 FGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       184 ~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                      + |++|.|+|+++++++|+++|+++..++...++ ..+.+|++||||+.|||++..+
T Consensus        92 ~-~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~-~g~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A           92 P-VVTVDVESIESALERIESLGGKTVTGRTPVGN-MGFAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             C-EEEEECSCHHHHHHHHHHTTCEEEEEEEEETT-TEEEEEEECTTSCEEEEEEECC
T ss_pred             E-EEEEEcCCHHHHHHHHHHcCCeEecCCeecCC-CEEEEEEECCCCCEEEEEecCC
Confidence            5 89999999999999999999999877666652 3478999999999999998653

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.65  E-value=3.6e-15  Score=116.95  Aligned_cols=117  Identities=16%  Similarity=0.145  Sum_probs=83.8

Q ss_pred             EEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCC--CCcCCCceEEEEEeeCCHH
Q 022769          118 VVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD--KYDIGTGFGHFGIAVEDVA  195 (292)
Q Consensus       118 v~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~--~~~~g~g~~hia~~V~Dl~  195 (292)
                      +.|.|+|++++++||+++|||++......+ +....+.+..++  .  .+.+....+..  ....+.++.|++|.|+|++
T Consensus         6 i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~--~--~l~l~~~~~~~~~~~~~~~~~~~~~~~v~dv~   80 (137)
T 3itw_A            6 VELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGG--G--IVMVRRTGEPYTVSCAGGHTCKQVIVWVSDVD   80 (137)
T ss_dssp             EEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSS--S--EEEEEETTCCSSCEECCCCCCCEEEEEESCHH
T ss_pred             EEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCC--e--EEEEEecCCCcCccCCCCCcEEEEEEEeCCHH
Confidence            569999999999999999999998765433 333345554443  2  34443321111  1111223449999999999


Q ss_pred             HHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC
Q 022769          196 KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       196 ~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                      +++++|+++|+++..++...+. +.+.+|++||+||.|||++..+
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           81 EHFMRSTAAGADIVQPLQDKPW-GLRQYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             HHHHHHHHTTCEEEEEEEEETT-TEEEEEEECSSSCEEEEEECC-
T ss_pred             HHHHHHHHcCCeeccCccccCC-CcEEEEEECCCCCEEEEEEEcC
Confidence            9999999999998877776664 4578999999999999998754

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.64  E-value=1.8e-15  Score=120.79  Aligned_cols=118  Identities=20%  Similarity=0.300  Sum_probs=88.0

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCC-----CCCCcCCCceEE
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG-----VDKYDIGTGFGH  186 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~-----~~~~~~g~g~~h  186 (292)
                      +++|.|+.|.|+|++++++||+++|||++....    +  ..+++..++    ..+.+.....     ..+...+.+..|
T Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~--~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~~~   72 (150)
T 3bqx_A            3 LQQVAVITLGIGDLEASARFYGEGFGWAPVFRN----P--EIIFYQMNG----FVLATWLVQNLQEDVGVAVTSRPGSMA   72 (150)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----S--SEEEEECSS----SEEEEEEHHHHHHHHSSCCCSSCCSCE
T ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----C--CEEEEEcCC----EEEEEEeccccccccCCCCCCCCCeEE
Confidence            468999999999999999999999999987653    1  235555432    2445544211     001111347789


Q ss_pred             EEEee---CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC
Q 022769          187 FGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       187 ia~~V---~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                      ++|.|   +|+++++++|+++|+++..+|...+.| .+.+|++||+|+.|||++.+.
T Consensus        73 l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  128 (150)
T 3bqx_A           73 LAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHG-GLRGYVADPDGHIWEIAFNPV  128 (150)
T ss_dssp             EEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTS-SEEEEEECTTCCEEEEEECTT
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCC-CEEEEEECCCCCEEEEEeCCC
Confidence            99999   799999999999999987776666544 477899999999999998753

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.64  E-value=5.7e-15  Score=114.08  Aligned_cols=111  Identities=13%  Similarity=0.041  Sum_probs=83.8

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~  192 (292)
                      ....|+.|.|+|++++++||+++|||++....    ..  .+++..++    ..+.+......    ...+..|++|.|+
T Consensus         4 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~----~~--~~~~~~~~----~~l~l~~~~~~----~~~~~~~~~~~v~   69 (124)
T 1xrk_A            4 LTSAVPVLTARDVAEAVEFWTDRLGFSRVFVE----DD--FAGVVRDD----VTLFISAVQDQ----VVPDNTQAWVWVR   69 (124)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC----SS--EEEEEETT----EEEEEEECSCT----TTGGGCEEEEEEE
T ss_pred             ccceeEEEEcCCHHHHHHHHHHccCceEEecC----CC--EEEEEECC----EEEEEEcCCCC----CCCCceEEEEEEC
Confidence            35678999999999999999999999998651    12  24454432    34455443221    1123469999999


Q ss_pred             CHHHHHHHHHHc------CC--eeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          193 DVAKTVDLVKAK------GG--KVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       193 Dl~~~~~~L~~~------G~--~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      |+++++++|+++      |+  ++..+|...+.|  +.+|++||+||.|||.+..
T Consensus        70 dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           70 GLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG--REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             CHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTE--EEEEEECTTCCEEEEEEC-
T ss_pred             CHHHHHHHHHHhcccccCCccccccCCceecCCC--CEEEEECCCCCEEEEEEec
Confidence            999999999999      99  887777777654  7899999999999999753

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.63  E-value=5.8e-15  Score=116.47  Aligned_cols=117  Identities=18%  Similarity=0.186  Sum_probs=82.7

Q ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEec-----CC--CCCCcCCCceEE
Q 022769          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN-----YG--VDKYDIGTGFGH  186 (292)
Q Consensus       114 ~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~-----~~--~~~~~~g~g~~h  186 (292)
                      +|.|+.|.|+|++++++||+++|||++......  ..+  .++..+.  .  .+.+...     ..  ......+.++ |
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~~--~~~~~~~--~--~l~l~~~~~~~~~~~~~~~~~~~~~~-~   78 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRS--PIF--RGLDTGK--S--CIGFNAHEAYELMQLAQFSETSGIKF-L   78 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCB--TTE--EEEECSS--S--EEEEECTHHHHHTTCGGGCCCBSCCE-E
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCC--Cce--EEeecCC--E--EEEEcCccccccccccccCCCCCCeE-E
Confidence            899999999999999999999999998643211  122  3343332  1  2333221     00  0111123454 9


Q ss_pred             EEEeeC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC
Q 022769          187 FGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       187 ia~~V~---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                      ++|.|+   |+++++++|+++|+++..+|...++ +.+.+|++||||+.|||++...
T Consensus        79 ~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           79 LNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYY-HWYQAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEEC-
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCeEecCccccCC-ccEEEEEECCCCCEEEEEEccc
Confidence            999999   5999999999999998777666554 4678999999999999998643

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.62  E-value=1.1e-14  Score=128.87  Aligned_cols=149  Identities=17%  Similarity=0.225  Sum_probs=101.8

Q ss_pred             hhhhhhhhhcCCeeeeccCCCCCCCeeecCCccchhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCc
Q 022769           71 AKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR  150 (292)
Q Consensus        71 ~~~~~~~d~dg~~~~~~~~~~~~~a~~~~~p~g~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~  150 (292)
                      .+...|.||+|+.+++..........           .......+.|+.|.|+|++++++||+++|||++......+...
T Consensus       132 g~~~~~~DP~G~~i~l~~~~~~~~~~-----------~~~~~~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~  200 (282)
T 3oxh_A          132 GRMSFITDPTGAAVGLWQANRHIGAT-----------LVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQN  200 (282)
T ss_dssp             EEEEEEECTTCCEEEEEEESSCCSCS-----------BCSSTTSEEEEEEECSCHHHHHHHHHHHHCCEEEEC-------
T ss_pred             eEEEEEECCCCCEEEEEEccccCCcc-----------ccCCCCccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCcc
Confidence            46678899999999887554321110           1123457899999999999999999999999987543111222


Q ss_pred             eEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCC
Q 022769          151 YTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG  230 (292)
Q Consensus       151 ~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG  230 (292)
                      +  ..+..++.  .+ ..+....  +  ....+..|++|.|+|+++++++++++|+++..+|...+. ..+.+|++||+|
T Consensus       201 ~--~~~~~~~~--~~-~~~~~~~--~--~~~~~~~~~~~~v~dvd~~~~~~~~~G~~~~~~p~~~~~-~~~~~~~~DPdG  270 (282)
T 3oxh_A          201 Y--RVLKAGDA--EV-GGCMEPP--M--PGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPS-VGRFAVLSDPQG  270 (282)
T ss_dssp             C--EEEEETTE--EE-EEEECCS--S--TTCCSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEEETT-TEEEEEEECTTS
T ss_pred             e--EEEEcCCc--cE-eeecCCC--C--CCCCCeEEEEEEeCCHHHHHHHHHHcCCEEecCCeEcCC-CeEEEEEECCCC
Confidence            2  33333321  11 1222211  1  122356789999999999999999999999887777764 467899999999


Q ss_pred             CEEEEEEcCC
Q 022769          231 YKFELLERGP  240 (292)
Q Consensus       231 ~~iel~e~~~  240 (292)
                      |.|+|++..+
T Consensus       271 n~~~l~~~~~  280 (282)
T 3oxh_A          271 AIFSVLKAAP  280 (282)
T ss_dssp             CEEEEEEEC-
T ss_pred             CEEEEEecCC
Confidence            9999998754

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.61  E-value=4e-16  Score=122.89  Aligned_cols=117  Identities=18%  Similarity=0.188  Sum_probs=83.5

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEE-----ec---CCCCCCcCCC
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELT-----YN---YGVDKYDIGT  182 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~-----~~---~~~~~~~~g~  182 (292)
                      .++++.|+.|.|+|++++++||+++|||++.....    .  .+.+..+     ..+...     ..   ........+.
T Consensus         5 ~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~----~--~~~~~~g-----~~l~~~~~~~~~~~~~~~~~~~~~~~   73 (141)
T 2qnt_A            5 QGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG----S--FVLFETG-----FAIHEGRSLEETIWRTSSDAQEAYGR   73 (141)
T ss_dssp             CSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS----S--EEEETTS-----CEEEEHHHHHHHHHSCCC--CCCSCC
T ss_pred             cccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC----C--cEEEecc-----ceeccCchhhhhccccCCccccccCC
Confidence            46899999999999999999999999999876531    1  1333211     222210     00   1111112344


Q ss_pred             ceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC
Q 022769          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                      +..|++|.|+|+++++++|++ |+++..+|...+.| .+.+|++||||+.|||++..+
T Consensus        74 ~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           74 RNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWG-QRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             SSCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTS-CEEEEEECTTCCEEEEEECC-
T ss_pred             CceEEEEEeCcHHHHHHHHHc-CCccccCCccCCCC-CEEEEEECCCCCEEEEEecch
Confidence            788999999999999999999 99987777666644 467899999999999998654

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.61  E-value=9e-15  Score=116.53  Aligned_cols=119  Identities=20%  Similarity=0.165  Sum_probs=79.5

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEec-------CCCCCCcCCCce
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN-------YGVDKYDIGTGF  184 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~-------~~~~~~~~g~g~  184 (292)
                      ..||.||.|.|+|++++++||++ ||+........+  .  ..++.....   ..+.+...       ........+.+.
T Consensus         7 ~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~--~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
T 4gym_A            7 QSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDE--S--CACMVVSEQ---AFVMLIDRARFADFTSKPIADATATTE   78 (149)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBT--T--EEEEEEETT---EEEEEEEHHHHGGGCSSCBCCTTTCBS
T ss_pred             CccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCC--c--eeEEeecCc---ceEeeeccccccccccccCCCCCCCCe
Confidence            56899999999999999999998 566554332211  1  122222221   12222210       011111123355


Q ss_pred             EEEEEeeC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC
Q 022769          185 GHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       185 ~hia~~V~---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                      .|++|.|.   ++++++++++++|+.+..+|...+  ..+++||+|||||+|||+...|
T Consensus        79 ~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~--~~~~~~f~DPDGn~iEi~~~~p  135 (149)
T 4gym_A           79 AIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYG--FMYGRSFHDLDGHLWEVMWMSA  135 (149)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECS--SEEEEEEECTTCCEEEEEEECT
T ss_pred             eEEEEEeccHHHHHHHHHHHHhcCceeeccccccC--CEEEEEEEcCCCCEEEEEEECh
Confidence            69999996   478899999999999988887764  4578999999999999997544

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.59  E-value=4.8e-14  Score=109.06  Aligned_cols=112  Identities=21%  Similarity=0.276  Sum_probs=82.1

Q ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCH
Q 022769          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDV  194 (292)
Q Consensus       115 i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl  194 (292)
                      ..|+.|.|+|++++++||++ |||++..+.    +.  .+++..++    ..+.+.......   ...+..|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~----~~--~~~~~~~~----~~l~l~~~~~~~---~~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFRD----AG--WMILQRGD----LMLEFFAHPGLD---PLASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEEC----SS--EEEEEETT----EEEEEEECTTCC---GGGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEecC----CC--EEEEEeCC----EEEEEEeCCCCC---CCCcceEEEEEECCH
Confidence            46899999999999999998 999997651    12  34455442    245554432211   123677999999999


Q ss_pred             HHHHHHHHHcCCee-------ecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC
Q 022769          195 AKTVDLVKAKGGKV-------TREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       195 ~~~~~~L~~~G~~i-------~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                      ++++++|+++|+++       ..+|...++| .+.+|++|||||.|||++....
T Consensus        70 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~~  122 (126)
T 1ecs_A           70 AEFYRQCKSVGIQETSSGYPRIHAPELQGWG-GTMAALVDPDGTLLRLIQNELL  122 (126)
T ss_dssp             HHHHHHHHHTTCCBCSSSSSEEEEEEECTTS-SEEEEEECTTSCEEEEEECCC-
T ss_pred             HHHHHHHHHCCCccccccCccccCCcccCcc-cEEEEEECCCCCEEEEecchhh
Confidence            99999999999984       5555555544 3678999999999999987543

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.59  E-value=3.5e-14  Score=111.22  Aligned_cols=116  Identities=12%  Similarity=0.104  Sum_probs=79.7

Q ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCH
Q 022769          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDV  194 (292)
Q Consensus       115 i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl  194 (292)
                      --+..|.|+|++++++||+++|||++.....    .  .+++..++    ..+.+...........+.+..|++|.|+|+
T Consensus         8 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~----~--~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~~l~~~v~dv   77 (134)
T 3fcd_A            8 QITPFLHIPDMQEALTLFCDTLGFELKYRHS----N--YAYLELSG----CGLRLLEEPARKIIPDGIARVAICIDVSDI   77 (134)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEEET----T--EEEEEETT----EEEEEEECCCC---------EEEEEECSCH
T ss_pred             cceeEEEECCHHHHHHHHHhccCcEEEEeCC----C--eEEEEECC----EEEEEEeCCCCCcCCCCCceEEEEEEeCCH
Confidence            3456799999999999999999999987632    1  35565543    345555433221111122346899999999


Q ss_pred             HHHHHHHHHcCC----eeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC
Q 022769          195 AKTVDLVKAKGG----KVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       195 ~~~~~~L~~~G~----~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                      ++++++|+++|+    ++..++...++ +.+.++++|||||.|||.+....
T Consensus        78 ~~~~~~l~~~g~~~g~~i~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  127 (134)
T 3fcd_A           78 DSLHTKLSPALENLPADQVEPLKNMPY-GQREFQVRMPDGDWLNFTAPLAE  127 (134)
T ss_dssp             HHHHHHHHHHHTTSCGGGEEEEEECTT-SEEEEEEECTTSCEEEEEEECCT
T ss_pred             HHHHHHHHhcCCccCCccccCCcccCC-CcEEEEEECCCCCEEEEEEcccc
Confidence            999999996654    45555555544 45778999999999999987644

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.58  E-value=1.5e-14  Score=111.30  Aligned_cols=107  Identities=14%  Similarity=0.080  Sum_probs=80.4

Q ss_pred             EEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHH
Q 022769          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVA  195 (292)
Q Consensus       116 ~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~  195 (292)
                      .++.|.|+|++++++||+++|||++....   + .  .+++..++    ..+.+......   ..+ +..|++|.|+|++
T Consensus         7 ~~~~l~v~D~~~a~~FY~~~LG~~~~~~~---~-~--~~~~~~~~----~~l~l~~~~~~---~~~-~~~~~~~~v~dvd   72 (122)
T 1qto_A            7 AVPVLTAVDVPANVSFWVDTLGFEKDFGD---R-D--FAGVRRGD----IRLHISRTEHQ---IVA-DNTSAWIEVTDPD   72 (122)
T ss_dssp             CCCEEEESSHHHHHHHHHHTTCCEEEEEC---S-S--EEEEEETT----EEEEEEECSCH---HHH-TTCEEEEEESCHH
T ss_pred             eeEEEEcCCHHHHHHHHHhccCcEEeeCC---C-C--EEEEEECC----EEEEEEcCCCC---CCC-CceEEEEEECCHH
Confidence            36789999999999999999999997651   1 2  34555432    34555443221   111 2369999999999


Q ss_pred             HHHHHHHHc------CC--eeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          196 KTVDLVKAK------GG--KVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       196 ~~~~~L~~~------G~--~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      +++++|+++      |+  ++..++...+.|  +.++++|||||.|||.+.
T Consensus        73 ~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           73 ALHEEWARAVSTDYADTSGPAMTPVGESPAG--REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHTTTSCSCTTCTTSCEECCCEEETTE--EEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHhhccccccCccccccCCCcCCCCC--cEEEEECCCCCEEEEecC
Confidence            999999999      99  887777766654  778999999999999974

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.56  E-value=9.3e-14  Score=110.08  Aligned_cols=115  Identities=17%  Similarity=0.198  Sum_probs=78.9

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecC---C-----CCCCcCCCceEEEE
Q 022769          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY---G-----VDKYDIGTGFGHFG  188 (292)
Q Consensus       117 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~---~-----~~~~~~g~g~~hia  188 (292)
                      .+.|.|+|++++++||+++|||++......+  .  .+++..++    ..+.+....   .     ......+.|+. ++
T Consensus         8 ~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~--~--~~~l~~g~----~~l~l~~~~~~~~~~~~~~~~~~~~~g~~-~~   78 (145)
T 2rk9_A            8 VPELYCFDINVSQSFFVDVLGFEVKYERPDE--E--FVYLTLDG----VDVMLEGIAGKSRKWLSGDLEFPLGSGVN-FQ   78 (145)
T ss_dssp             EEEEEESSHHHHHHHHHHTTCCEEEEEEGGG--T--EEEEEETT----EEEEEEEC-----------CCSSTTTTEE-EE
T ss_pred             eEEEEECCHHHHHHHHHhccCCEEEeecCCC--C--EEEEEcCC----eEEEEEeccCCCcccccCccccCCCCceE-EE
Confidence            4779999999999999999999997532211  2  34555442    233343320   0     01112334666 99


Q ss_pred             EeeCCHHHHHHHHHH-cCCeeecCCeec------CCCCeEEEEEECCCCCEEEEEEcCC
Q 022769          189 IAVEDVAKTVDLVKA-KGGKVTREPGPV------KGGNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       189 ~~V~Dl~~~~~~L~~-~G~~i~~~p~~~------~~g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                      |.|+|+++++++|++ +|+++..+|...      ..+..+.+|++||||+.|||++...
T Consensus        79 ~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~  137 (145)
T 2rk9_A           79 WDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIH  137 (145)
T ss_dssp             EECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC--
T ss_pred             EEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCC
Confidence            999999999999999 999987665542      1234567899999999999998643

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.54  E-value=9.7e-14  Score=110.43  Aligned_cols=116  Identities=22%  Similarity=0.167  Sum_probs=78.6

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEE----
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF----  187 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hi----  187 (292)
                      ++++.|+.|.|+|++++++||+++|||++.......+ .+  .++  +   .  .+.+........ .......|+    
T Consensus        19 ~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~--~~~--g---~--~l~l~~~~~~~~-~~~~~~~~~~~g~   87 (148)
T 3bt3_A           19 VVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDE-GF--GDY--G---C--VFDYPSEVAVAH-LTPFRGFHLFKGE   87 (148)
T ss_dssp             EEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTT-SC--EEE--E---E--EESSCTTTTSCC---CCCSEEEEESC
T ss_pred             eEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCC-Cc--cEE--c---c--EEEEeccCCCcc-cccccccceeecc
Confidence            5689999999999999999999999999864221111 11  122  1   1  133311111100 000011222    


Q ss_pred             ------EE-eeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          188 ------GI-AVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       188 ------a~-~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                            +| .|+|+++++++|+++|+++..+|...++ +.+.+|++||||+.|||.+..
T Consensus        88 ~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           88 PIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPW-GARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETT-TEEEEEEECTTSCEEEEEEEC
T ss_pred             CCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCC-ccEEEEEECCCCCEEEEeeec
Confidence                  55 8999999999999999998888777664 456789999999999999853

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.50  E-value=2.8e-13  Score=123.54  Aligned_cols=165  Identities=14%  Similarity=0.171  Sum_probs=104.6

Q ss_pred             hhhhhhhcCCeeeeccCCCCCCCeeecCC---ccc-h-hhhccCccceEEEEEEcC--CHHHHHHHHHHhcCCEEEEEee
Q 022769           73 ALKLLRAEGSTIEASTSGNMAPTSNTVTE---QNV-L-DWVKSDKRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRD  145 (292)
Q Consensus        73 ~~~~~d~dg~~~~~~~~~~~~~a~~~~~p---~g~-~-~w~~~~i~~i~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~  145 (292)
                      ...+.+++|..+++.........+ ....   ++. . .-....+++|+|++|.|+  |++++.+||+++|||++.....
T Consensus       113 ~~~~~~p~g~~~~lv~~~~~~~~f-~p~~~~~~~~~~~~~~~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~  191 (357)
T 2r5v_A          113 TATIGGFGDVVHTLIQRDGTSAEL-PPGFTGSMDVTNHGKGDVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEH  191 (357)
T ss_dssp             EEEEECSTTCEEEEEECCSSSCCC-CTTCEECSCCCCTTCTTCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEE
T ss_pred             EEEEeccCCeEEEEEecccCCCCC-CCCCcccCcccccCCCCCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEe
Confidence            445667777777776543221110 1000   000 0 001235789999999999  9999999999999999986532


Q ss_pred             --CCCCceEEEEEeeCCCCceEEEEEEecCCCC-CC--------cCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCee
Q 022769          146 --IPEDRYTNAFLGYGPEDSHFVVELTYNYGVD-KY--------DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGP  214 (292)
Q Consensus       146 --~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~-~~--------~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~  214 (292)
                        .+.......++..+..  .+.+++....... ..        ..+.|++||+|.|+|+++++++|+++|+++...|..
T Consensus       192 ~~~~~~~~~~~~l~~~~g--~~~l~l~~~~~~~~~~~~~~~~~~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~  269 (357)
T 2r5v_A          192 IVVGAQAMNSTVVQSASG--AVTLTLIEPDRNADPGQIDEFLKDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGA  269 (357)
T ss_dssp             EEETTEEEEEEEEECTTS--CCEEEEEEECTTSBCCHHHHHHHHHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHH
T ss_pred             eccCCcceEEEEEECCCC--CEEEEEeeecCCCCCchhHHHHHhcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchh
Confidence              1222234456655433  3455555432211 10        134699999999999999999999999998766532


Q ss_pred             cC---------CCC-------eEEEEEECCCCCEEEEEEcCC
Q 022769          215 VK---------GGN-------TVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       215 ~~---------~g~-------~~~~y~~DPdG~~iel~e~~~  240 (292)
                      ..         .+.       ..++|++||+|+++||++.+.
T Consensus       270 yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~~~  311 (357)
T 2r5v_A          270 YYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTAST  311 (357)
T ss_dssp             HHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBCCC
T ss_pred             HHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEccCC
Confidence            10         000       126899999999999998643

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.41  E-value=3.8e-12  Score=103.68  Aligned_cols=118  Identities=14%  Similarity=0.147  Sum_probs=77.4

Q ss_pred             ceEEEEEEcCC--HHHHHHHHHHhcCCEEEEEe-------eCCCCceEEEEEeeCCCCceEEEEEEecCCC-C-CCcC--
Q 022769          114 RMLHVVYRVGD--LDKTIKFYTECLGMKLLRKR-------DIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-D-KYDI--  180 (292)
Q Consensus       114 ~i~Hv~L~V~D--le~a~~FY~~vLG~~~~~~~-------~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~-~-~~~~--  180 (292)
                      .--++.|.|.|  ++++++||+++|||++....       ..+.+....+.+..++    ..+.+....+. . +...  
T Consensus        24 ~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g----~~l~l~~~~~~~~~~~~~~~   99 (166)
T 1xy7_A           24 TEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAG----SSFVVCDVSSLPGFSTAKSE   99 (166)
T ss_dssp             EEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETT----EEEEEEEGGGSTTCCCCCTT
T ss_pred             ceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECC----eEEEEeCCCcccCCccccCC
Confidence            33567799999  99999999999999987532       1111222233344432    12333332111 0 1111  


Q ss_pred             CCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeec--CCCCeEEEEEECCCCCEEEEEEcC
Q 022769          181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       181 g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~--~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      +.++ |++|.|+|+++++++|+++|++ ..++...  ++  .+.++++||+|+.|+|++..
T Consensus       100 ~~g~-~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          100 GSGV-TFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             SCCC-EEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC--
T ss_pred             CCcE-EEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeec
Confidence            2343 8999999999999999999999 8887776  55  56789999999999999754

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.34  E-value=9e-11  Score=93.70  Aligned_cols=123  Identities=15%  Similarity=0.141  Sum_probs=79.5

Q ss_pred             EEEEEcC-CHHHHHHHHHHhcCCEEEEEeeCCC------------CceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCc
Q 022769          117 HVVYRVG-DLDKTIKFYTECLGMKLLRKRDIPE------------DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  183 (292)
Q Consensus       117 Hv~L~V~-Dle~a~~FY~~vLG~~~~~~~~~~~------------~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g  183 (292)
                      +..|.|. |+++|++||+++||+++.......+            +....+.+..++.    .+.+....+........|
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~----~l~~~d~~~~~~~~~~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSF----ALMASDNHPAYPYEGIKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTE----EEEEEECCTTSCCCCCCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCE----EEEEEcCCCccCCCCCCc
Confidence            3778888 9999999999999999876432111            2323333444321    222332211101112234


Q ss_pred             eEEEEEeeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCCCCCce
Q 022769          184 FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLC  246 (292)
Q Consensus       184 ~~hia~~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~~~~l~  246 (292)
                       .+++|.|+|   +++++++|+ +|+++..++...++| .+.++++||+|+.|+|.+.....+.-.
T Consensus        82 -~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG-~r~~~v~Dp~G~~w~l~~~~~~~~~~~  144 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWA-ASFGMFTDRFGVAWMVNCEQDREGGSH  144 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTE-EEEEEEECTTSCEEEEEESCC------
T ss_pred             -eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcc-cceEEEECCCCCEEEEEEecccCCCcc
Confidence             479999998   789999985 899998888887764 467889999999999998766655433

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.31  E-value=5.4e-11  Score=104.82  Aligned_cols=125  Identities=14%  Similarity=0.036  Sum_probs=84.4

Q ss_pred             hhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceE
Q 022769          106 DWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG  185 (292)
Q Consensus       106 ~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~  185 (292)
                      .|.........++.+.|.|++++++||+++|||++......+ +.  ...+..++......+.+.....    ..+....
T Consensus       175 ~~~~~~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~  247 (301)
T 2zw5_A          175 RAEEPLTTLAVITELPVRDVAATLRLVEAALGARTAFAIGDP-PE--FAEAALTPWSAGPRFRLAAVPG----PGPVEPV  247 (301)
T ss_dssp             SSCCSCEEEEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-EE--EEEEESSSSSSSSEEEEEECCC----SSCCCCC
T ss_pred             HhhhhcccceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-cc--EEEEEcCCCccccccccccCCC----cCCCCce
Confidence            354434445668899999999999999999999987543221 12  2344444311101122211111    1111234


Q ss_pred             EEEEeeC-CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          186 HFGIAVE-DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       186 hia~~V~-Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      +++|.|+ |+++++++++++|+++..+|...+.| .+.++++|||||.|+|.+.
T Consensus       248 ~~~~~v~~dvd~~~~~~~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          248 RLHLDAAGTADSLHRRAVDAGARVDGPPVRRPWG-RSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             EEEEEcCccHHHHHHHHHHcCCccccCcccCCCc-ceEEEEECCCCCEEEeeCC
Confidence            7899999 99999999999999998777766644 4678999999999999874

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.31  E-value=1.7e-11  Score=112.82  Aligned_cols=129  Identities=16%  Similarity=0.229  Sum_probs=89.3

Q ss_pred             cCccceEEEEEEcC--CHHHHHHHHHHhcCCEEEEEee-----CCCCceEEEEEeeCCCCceEEEEEEecC--CCCCC--
Q 022769          110 SDKRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRD-----IPEDRYTNAFLGYGPEDSHFVVELTYNY--GVDKY--  178 (292)
Q Consensus       110 ~~i~~i~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~-----~~~~~~~~~~l~~g~~~~~~~l~l~~~~--~~~~~--  178 (292)
                      ..+.+|+||++.|+  |++++.+||+++|||++.....     .+.......++.....  .+.+++....  .....  
T Consensus       180 ~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g--~v~i~l~~~~~~~~~s~~~  257 (381)
T 1t47_A          180 RTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTL--KVKFPINEPALAKKKSQID  257 (381)
T ss_dssp             CSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTS--CSEEEEEEECCSSSCCHHH
T ss_pred             CCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCC--cEEEEEecCCcCCCccHHH
Confidence            35789999999999  9999999999999999876532     1222333444443222  2445555432  11111  


Q ss_pred             -----cCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCC---------CC-------eEEEEEECCCCCEEEEEE
Q 022769          179 -----DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG---------GN-------TVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       179 -----~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~---------g~-------~~~~y~~DPdG~~iel~e  237 (292)
                           ..+.|++||||.|+|+++++++|+++|+++...|...-.         +.       ...+|-+||+|.++++++
T Consensus       258 ~~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift  337 (381)
T 1t47_A          258 EYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFT  337 (381)
T ss_dssp             HHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEB
T ss_pred             HHHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEec
Confidence                 235699999999999999999999999998766533210         00       124677899999999998


Q ss_pred             cCC
Q 022769          238 RGP  240 (292)
Q Consensus       238 ~~~  240 (292)
                      .+-
T Consensus       338 ~~~  340 (381)
T 1t47_A          338 KPV  340 (381)
T ss_dssp             CCS
T ss_pred             cCC
Confidence            653

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.30  E-value=1e-11  Score=105.55  Aligned_cols=134  Identities=15%  Similarity=0.103  Sum_probs=90.6

Q ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEE---EEee
Q 022769          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF---GIAV  191 (292)
Q Consensus       115 i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hi---a~~V  191 (292)
                      .-+.+|.|.|.+++++||+++|||++..+..      ..+.++.+....  .+.+-+.+.... ....|+.|+   ++.|
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~~~--~L~lEEsp~~~~-~~~~Glkh~a~i~i~v   81 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTGLE--KLVLEEAPSMRT-RKVEGRKKLARLIVKV   81 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCE--EEEEEECCTTTC-BCCCSSCSEEEEEEEE
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCCcc--eEEEEeCCCccc-ccccccceeeeEEEEc
Confidence            4567899999999999999999999988754      256666543333  333333222221 123477777   5999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC----------------------CCCceeee
Q 022769          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT----------------------PEPLCQVM  249 (292)
Q Consensus       192 ~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~----------------------~~~l~hv~  249 (292)
                      ++.+++.+-|.. +..+.. ......|  +++|+.||+|+.||++...+.                      ...+ ||.
T Consensus        82 p~~~el~~lL~~-~~~~~~-~~~gdhg--yA~yl~dPEGn~ieiyae~d~~~l~~v~~~~~l~~~~~~~gLs~fti-~I~  156 (244)
T 3e0r_A           82 ENPLEIEGILSK-TDSIHR-LYKGQNG--YAFEIFSPEDDLILIHAEDDIASLVEVGEKPEFQTDLASISLSKFEI-SME  156 (244)
T ss_dssp             SSHHHHHHHHTT-CSCCSE-EEECSSS--EEEEEECTTCCEEEEECCSCGGGCEECSSCCCCCCCCSCCCCSSEEE-EEE
T ss_pred             CCHHHHHHHHhc-cccccc-ccccCCc--EEEEEECCCCCeEEEEEcCCHHHhhcccchhhccccccccCCCCcEE-EEE
Confidence            998776655554 544421 1222233  479999999999999965421                      0147 999


Q ss_pred             eecCCHHHHHHHHHH
Q 022769          250 LRVGDLDRAINFYKK  264 (292)
Q Consensus       250 l~v~D~~~s~~fY~~  264 (292)
                      |+|.|.+++  ||..
T Consensus       157 LnV~d~~~s--Fy~~  169 (244)
T 3e0r_A          157 LHLPTDIES--FLES  169 (244)
T ss_dssp             EEECTTCCC--SCCH
T ss_pred             EEcCchHHH--Hhhc
Confidence            999999998  9975

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.24  E-value=6.5e-10  Score=87.12  Aligned_cols=114  Identities=16%  Similarity=0.221  Sum_probs=77.3

Q ss_pred             EEEEcC--CHHHHHHHHHHhc-CCEEEEEeeCC------CCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEE
Q 022769          118 VVYRVG--DLDKTIKFYTECL-GMKLLRKRDIP------EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (292)
Q Consensus       118 v~L~V~--Dle~a~~FY~~vL-G~~~~~~~~~~------~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia  188 (292)
                      ..|.+.  |.++|++||+++| |+++.......      ++....+.+..++.    .+.+......+....+.+ ..++
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~----~~~~~~~~~~~~~~~~~~-~~l~   83 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQ----SVHCIDSHVRHAFDFTPA-FSFF   83 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTE----EEEEEEESSCCSCCCCTT-EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCE----EEEEECCCCCCCCCCCCc-eEEE
Confidence            567886  9999999999999 99987532111      12333344444331    222222110111112223 3689


Q ss_pred             EeeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          189 IAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       189 ~~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      |.|+|   +++++++|+ +|+++..++...++| .+.++++||+|+.|+|.+.
T Consensus        84 ~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G-~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           84 VDCESNAQIERLAEALS-DGGKALMPLGDYGFS-QRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EECCCHHHHHHHHHHHH-TTSEEEEEEECCSSS-SEEEEEECTTSCEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHHH-cCCEEecccccCCCc-ceEEEEECCCCCEEEEEec
Confidence            99999   999999999 999999888888765 3567899999999999863

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.19  E-value=6.4e-11  Score=107.99  Aligned_cols=128  Identities=16%  Similarity=0.163  Sum_probs=85.1

Q ss_pred             CccceEEEEEEcC--CHHHHHHHHHHhcCCEEEEEeeCCC--CceEEEEEeeCCCCceEEEEEEec-CCCCC-------C
Q 022769          111 DKRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYN-YGVDK-------Y  178 (292)
Q Consensus       111 ~i~~i~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~l~l~~~-~~~~~-------~  178 (292)
                      .+++|+||++.|+  |++++.+||+++|||++........  .......+.....  ...+++... .....       .
T Consensus       155 ~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g--~~~i~L~~~~~~~~~~~~~~~~~  232 (357)
T 1cjx_A          155 GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDG--MIRIPLNEESSKGAGQIEEFLMQ  232 (357)
T ss_dssp             SEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTS--SCEEEEEEECTTCCSHHHHHHHH
T ss_pred             CeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCC--CEEEEEeeecCCCCChHHHhHHh
Confidence            4679999999999  9999999999999999987643221  1111112222222  245566554 21111       1


Q ss_pred             cCCCceEEEEEeeCCHHHHHHHHHHcCCeeec-CCee--------cC-CCCe-------EEEEEEC----CCCCEEEEEE
Q 022769          179 DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTR-EPGP--------VK-GGNT-------VIAFIED----PDGYKFELLE  237 (292)
Q Consensus       179 ~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~-~p~~--------~~-~g~~-------~~~y~~D----PdG~~iel~e  237 (292)
                      ..+.|++||||.|+|++++.++|+++|+++.. .|..        .. .+..       ..+|-+|    |+|+++++++
T Consensus       233 ~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift  312 (357)
T 1cjx_A          233 FNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFS  312 (357)
T ss_dssp             HTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEB
T ss_pred             cCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEec
Confidence            13568999999999999999999999999876 4410        00 1110       1366788    8899999997


Q ss_pred             cCC
Q 022769          238 RGP  240 (292)
Q Consensus       238 ~~~  240 (292)
                      .+-
T Consensus       313 ~~~  315 (357)
T 1cjx_A          313 ETL  315 (357)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            653

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.07  E-value=6.4e-09  Score=82.01  Aligned_cols=115  Identities=11%  Similarity=0.148  Sum_probs=76.9

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhc-CCEEEEEeeCC------CCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceE
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECL-GMKLLRKRDIP------EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG  185 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vL-G~~~~~~~~~~------~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~  185 (292)
                      ++|...-+.+.|.++|++||+++| |+++.......      ++....+.+..++.    .+..... .+. .. . . .
T Consensus         4 ~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~----~~m~~d~-~~~-~~-~-~-~   74 (139)
T 1tsj_A            4 PKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQ----VFMAIDA-NSG-TE-L-P-I   74 (139)
T ss_dssp             CSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTE----EEEEEC-----------C-C
T ss_pred             CceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCE----EEEEECC-CCC-CC-c-e-E
Confidence            455555555669999999999999 99987532211      23444455555432    1212211 111 11 1 1 3


Q ss_pred             EEEEeeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          186 HFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       186 hia~~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      .+++.|+|   +++++++|. +|+++..++...++| .+..+++||+|+.|+|...
T Consensus        75 sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG-~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           75 SLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPY-REFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             CEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCC-ceEEEEECCCCCEEEEeec
Confidence            58899987   788899998 799999888888764 5678999999999999974

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.05  E-value=3.3e-09  Score=98.64  Aligned_cols=100  Identities=19%  Similarity=0.284  Sum_probs=73.1

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCC-----CceEEEEEeeCCCCceEEEEEEecCC---CCCC----
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----DRYTNAFLGYGPEDSHFVVELTYNYG---VDKY----  178 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~l~l~~~~~---~~~~----  178 (292)
                      .+.+|+||++.|+|++++.+||+++|||++......++     ......++.....  .+.+++.....   ....    
T Consensus       196 ~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g--~i~l~l~e~~~~~~~~s~i~~f  273 (418)
T 1sp8_A          196 GLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSE--NVLLPLNEPVHGTKRRSQIQTF  273 (418)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSS--CCEEEEEEECCCSSSCCHHHHH
T ss_pred             CcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCC--cEEEEEeecccccCCCcchhhh
Confidence            36799999999999999999999999999987654322     1234455654433  34566655421   1111    


Q ss_pred             ---cCCCceEEEEEeeCCHHHHHHHHHH----cCCeeecCC
Q 022769          179 ---DIGTGFGHFGIAVEDVAKTVDLVKA----KGGKVTREP  212 (292)
Q Consensus       179 ---~~g~g~~hia~~V~Dl~~~~~~L~~----~G~~i~~~p  212 (292)
                         ..|.|++||||.|+|++++.++|++    +|+++...|
T Consensus       274 l~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          274 LDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             hhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence               2467999999999999999999999    799987765

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.02  E-value=5.2e-09  Score=97.50  Aligned_cols=128  Identities=17%  Similarity=0.261  Sum_probs=85.6

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCC-----CceEEEEEeeCCCCceEEEEEEecCC---CCC----C
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----DRYTNAFLGYGPEDSHFVVELTYNYG---VDK----Y  178 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~l~l~~~~~---~~~----~  178 (292)
                      ...+|+||++.|.|++++.+||+++|||++......++     ......++.....  .+.+.+.....   ...    +
T Consensus       199 ~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g--~~~l~l~e~~~~~~~~s~i~~f  276 (424)
T 1sqd_A          199 GIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDE--MVLLPINEPVHGTKRKSQIQTY  276 (424)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTS--CSEEEEEEECCC---CCHHHHH
T ss_pred             CcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCC--cEEEEEecccccCCCcchhhhh
Confidence            36799999999999999999999999999987753322     1334445544333  34566665421   111    1


Q ss_pred             ---cCCCceEEEEEeeCCHHHHHHHHHH----cCCeeecCC-eec--------CCC----------CeEEEEEECCCCCE
Q 022769          179 ---DIGTGFGHFGIAVEDVAKTVDLVKA----KGGKVTREP-GPV--------KGG----------NTVIAFIEDPDGYK  232 (292)
Q Consensus       179 ---~~g~g~~hia~~V~Dl~~~~~~L~~----~G~~i~~~p-~~~--------~~g----------~~~~~y~~DPdG~~  232 (292)
                         ..|.|++||||.|+|+.++.++|++    +|+++...| ...        ..-          ....++-+|.+|.+
T Consensus       277 l~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~pp~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~l  356 (424)
T 1sqd_A          277 LEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTL  356 (424)
T ss_dssp             HHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEEE
T ss_pred             hhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCCCcchhHHHHHhhccccchhhHHHHHHcCeEEecCCCCeE
Confidence               2467999999999999999999999    799987664 110        000          01135556777777


Q ss_pred             EEEEEcCC
Q 022769          233 FELLERGP  240 (292)
Q Consensus       233 iel~e~~~  240 (292)
                      +.+++.+-
T Consensus       357 lqift~~~  364 (424)
T 1sqd_A          357 LQIFTKPL  364 (424)
T ss_dssp             EEEEBCCS
T ss_pred             EEEEcccc
Confidence            77776553

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.00  E-value=2.5e-08  Score=78.47  Aligned_cols=113  Identities=11%  Similarity=0.176  Sum_probs=77.5

Q ss_pred             EEEcC-CHHHHHHHHHHhcC-CEEEEEee------CCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          119 VYRVG-DLDKTIKFYTECLG-MKLLRKRD------IPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       119 ~L~V~-Dle~a~~FY~~vLG-~~~~~~~~------~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .|.+. |.++|++||+++|| .++.....      ..++....+.+..++.    .+.+....+......+.++ .+.+.
T Consensus        14 ~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~----~lm~~d~~~~~~~~~~~~~-~l~l~   88 (138)
T 3oms_A           14 FLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQ----EFMCIDSYVNHNFTFTPAM-SLYVT   88 (138)
T ss_dssp             EEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTE----EEEEEECSSCCSCCCCTTS-CEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCE----EEEEEcCCCCCCCCCCCCE-EEEEE
Confidence            36667 89999999999999 67654321      1234556677766542    3333332221112223333 58999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       191 V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      |+|   +++++++|. .|+++..++...++| .+..+++||+|+.|.|...
T Consensus        89 ~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg-~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           89 CETEEEIDTVFHKLA-QDGAILMPLGSYPFS-KKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             ESSHHHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEEC
T ss_pred             cCCHHHHHHHHHHHH-cCCeEecCcccccCC-cEEEEEECCCCCEEEEEeC
Confidence            999   999999995 688998888888764 4668999999999999753

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=98.99  E-value=3e-09  Score=97.93  Aligned_cols=100  Identities=13%  Similarity=0.177  Sum_probs=72.6

Q ss_pred             CccceEEEEEEcCC--HHHHHHHHHHhcCCEEEEEeeC-----CCCceEEEEEeeCCCCceEEEEEEecCC--CCCC---
Q 022769          111 DKRRMLHVVYRVGD--LDKTIKFYTECLGMKLLRKRDI-----PEDRYTNAFLGYGPEDSHFVVELTYNYG--VDKY---  178 (292)
Q Consensus       111 ~i~~i~Hv~L~V~D--le~a~~FY~~vLG~~~~~~~~~-----~~~~~~~~~l~~g~~~~~~~l~l~~~~~--~~~~---  178 (292)
                      .+++|+||++.|.|  ++++.+||+++|||+.....+.     +........+....  ..+.+++..+..  ....   
T Consensus       170 ~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~--g~v~i~L~ep~~~~~~s~I~~  247 (393)
T 3isq_A          170 SLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE--ESIKMPINEPAPGKKKSQIQE  247 (393)
T ss_dssp             CEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTT--SSCEEEEEEEECCSBCCHHHH
T ss_pred             CeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCC--CCEEEEEecCCCCCCCCHHHH
Confidence            36799999999998  9999999999999999776431     11233334443332  235666665432  1111   


Q ss_pred             ----cCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCC
Q 022769          179 ----DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP  212 (292)
Q Consensus       179 ----~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p  212 (292)
                          ..|.|++||||.|+|+.++.++|+++|+++...|
T Consensus       248 fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P  285 (393)
T 3isq_A          248 YVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVP  285 (393)
T ss_dssp             HHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             HHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCC
Confidence                1477999999999999999999999999987654

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=98.95  E-value=3e-08  Score=80.88  Aligned_cols=116  Identities=13%  Similarity=0.167  Sum_probs=79.9

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEEEEeeCC--------------CCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCC
Q 022769          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIP--------------EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGT  182 (292)
Q Consensus       117 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~--------------~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~  182 (292)
                      ...|.+.|.++|++||+++||.++.......              ++....+.+..++.    .+.+....+. ....+.
T Consensus        28 ~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~----~lm~~D~~g~-~~~~~~  102 (172)
T 3l20_A           28 FPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGV----KVLCSDSFGR-ADKINN  102 (172)
T ss_dssp             EEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTE----EEEEEECTTC-CCCCCS
T ss_pred             EEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCE----EEEEECCCCC-CCCCCC
Confidence            3456777999999999999999986553321              24455666766532    3333332221 122233


Q ss_pred             ceEEEEEee--------CCHHHHHHHHHHcC-CeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          183 GFGHFGIAV--------EDVAKTVDLVKAKG-GKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       183 g~~hia~~V--------~Dl~~~~~~L~~~G-~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      ++ .+.+.+        +|+++++++|.+.| +++..++...++|. +..+++||+|+.|+|....
T Consensus       103 ~~-sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~-r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          103 GI-SLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGG-KMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             SE-EEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSS-EEEEEECTTSCEEEEEEEC
T ss_pred             cE-EEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCc-EEEEEECCCCCEEEEEeCC
Confidence            43 356665        57899999999999 69988888887754 5578999999999998654

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.54  E-value=7.3e-06  Score=71.62  Aligned_cols=152  Identities=13%  Similarity=0.144  Sum_probs=99.9

Q ss_pred             cCccceEEEEEEcCCHHHHHHHHHHhcC-----CEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCC---------
Q 022769          110 SDKRRMLHVVYRVGDLDKTIKFYTECLG-----MKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV---------  175 (292)
Q Consensus       110 ~~i~~i~Hv~L~V~Dle~a~~FY~~vLG-----~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~---------  175 (292)
                      .++++|+|+++.|.+++        .||     |.+...+..+........+.+++    ..||+....+.         
T Consensus        20 ~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg----~YLElIai~~~~~~~~~~~~   87 (274)
T 3p8a_A           20 HMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINE----NYIELLDVENNEKLKKMAKT   87 (274)
T ss_dssp             -CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSS----SEEEEEEESCHHHHHHHTTS
T ss_pred             CccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCC----EEEEEEeecCcccccccccc
Confidence            45789999999999884        467     99887765554444444454432    36666553221         


Q ss_pred             --C--CC-------cCCCceEEEEEeeCCHHHHHHHHHHcCCeeecC---CeecCCCC---eEEEEEECCC--CCEE-EE
Q 022769          176 --D--KY-------DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTRE---PGPVKGGN---TVIAFIEDPD--GYKF-EL  235 (292)
Q Consensus       176 --~--~~-------~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~---p~~~~~g~---~~~~y~~DPd--G~~i-el  235 (292)
                        .  ..       ..+.|+.+++++++|+++..+++.++|+.....   ....++|.   .+.++..|+.  +..+ -|
T Consensus        88 ~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~d~~~~~~~~PFf  167 (274)
T 3p8a_A           88 IEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKPPFF  167 (274)
T ss_dssp             TGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEEEEEEEECCCC--CEEEEEEEEECSSCCSSCCCEE
T ss_pred             cCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCCCccccccCCCCCEEEEEEEeccCCCccCCCccEE
Confidence              1  11       245699999999999999999999999875321   11122332   3345555654  2222 22


Q ss_pred             EEcC-C-------------CCCCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          236 LERG-P-------------TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       236 ~e~~-~-------------~~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      ++.. +             ....|.+|++.+.|++++.+.|++.||+...+.
T Consensus       168 iqw~~~~~~r~~~~~~HpnGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~  219 (274)
T 3p8a_A          168 IQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEE  219 (274)
T ss_dssp             EEESSCTTHHHHHHTTTCCTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEE
T ss_pred             EecCCCccccccccccCCCccceEEEEEEEeCCHHHHHHHHHHHhCCCcccc
Confidence            3322 1             123789999999999999999999999999865

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=98.48  E-value=1.3e-07  Score=80.48  Aligned_cols=152  Identities=9%  Similarity=0.070  Sum_probs=98.0

Q ss_pred             ccchhhhhhc---cccccccccchh-----------------hhhhhhhcCCeeeeccCCCCCCCeeecCCcc---chhh
Q 022769           51 SRRLALFQLG---AAIPQSHFFGAK-----------------ALKLLRAEGSTIEASTSGNMAPTSNTVTEQN---VLDW  107 (292)
Q Consensus        51 ~~r~~~~~~~---~~~~~~~~~g~~-----------------~~~~~d~dg~~~~~~~~~~~~~a~~~~~p~g---~~~w  107 (292)
                      .+..|+||+|   +++|.+..++..                 ++.+.||+|+.+++.++...+.+-.+.++++   ...|
T Consensus        66 ~~~~Glkh~a~i~i~vp~~~el~~lL~~~~~~~~~~~gdhgyA~yl~dPEGn~ieiyae~d~~~l~~v~~~~~l~~~~~~  145 (244)
T 3e0r_A           66 RKVEGRKKLARLIVKVENPLEIEGILSKTDSIHRLYKGQNGYAFEIFSPEDDLILIHAEDDIASLVEVGEKPEFQTDLAS  145 (244)
T ss_dssp             BCCCSSCSEEEEEEEESSHHHHHHHHTTCSCCSEEEECSSSEEEEEECTTCCEEEEECCSCGGGCEECSSCCCCCCCCSC
T ss_pred             ccccccceeeeEEEEcCCHHHHHHHHhcccccccccccCCcEEEEEECCCCCeEEEEEcCCHHHhhcccchhhccccccc
Confidence            4568999996   888987776533                 4567788888888877776665433333332   2223


Q ss_pred             hccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCC-CCcCCCceEE
Q 022769          108 VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD-KYDIGTGFGH  186 (292)
Q Consensus       108 ~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~-~~~~g~g~~h  186 (292)
                      .--..--+ ||+|.|+|.+++  ||++ +|+..           ...|....+            ...+ +.....|+..
T Consensus       146 ~gLs~fti-~I~LnV~d~~~s--Fy~~-~~~~~-----------~~~F~~a~G------------~dl~~~~~~t~gLe~  198 (244)
T 3e0r_A          146 ISLSKFEI-SMELHLPTDIES--FLES-SEIGA-----------SLDFIPAQG------------QDLTVDNTVTWDLSM  198 (244)
T ss_dssp             CCCSSEEE-EEEEEECTTCCC--SCCH-HHHTT-----------TEEEEECCC------------TTTTCCTTSBSSEEE
T ss_pred             cCCCCcEE-EEEEEcCchHHH--Hhhc-cCCcc-----------cEEEEcccC------------CCCCCCCCCccCceE
Confidence            22122346 999999999998  9986 44410           123333211            1111 1122348888


Q ss_pred             EEEeeC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          187 FGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       187 ia~~V~--Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      +.|.|+  |+.++.++|++.|+.+..        ...++.+.||.|+.|-|.+
T Consensus       199 l~~~v~~~dl~~l~~~L~~~g~~idk--------k~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          199 LKFLVNELDIASLRQKFESTEYFIPK--------SEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             EEEEESSCCHHHHHHHTTTSCEECCT--------TCCEEEEECTTSCEEEEEE
T ss_pred             EEEEeCHHHHHHHHHHHHhCCceEcc--------cCCEEEEECCCCCEEEEEE
Confidence            888886  488999999999875431        2335778999999988764

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.32  E-value=1.5e-05  Score=64.24  Aligned_cols=132  Identities=13%  Similarity=0.121  Sum_probs=89.6

Q ss_pred             EEEcC-CHHHHHHHHHHhc-CCEEEEEeeC-------CCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEE
Q 022769          119 VYRVG-DLDKTIKFYTECL-GMKLLRKRDI-------PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (292)
Q Consensus       119 ~L~V~-Dle~a~~FY~~vL-G~~~~~~~~~-------~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~  189 (292)
                      .|... |.+++++||+++| |.++......       +++....+.+..++.    .+.+....+  ......++ .+.+
T Consensus        10 yL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~----~~m~~d~~p--~~~~~~~~-sl~v   82 (163)
T 1u69_A           10 CLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGI----PCLGLNGGP--AFRHSEAF-SFQV   82 (163)
T ss_dssp             EEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTE----EEEEEECCT--TCCCCTTE-EEEE
T ss_pred             EEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCE----EEEEECCCC--CcCCCCce-EEEE
Confidence            35666 9999999999999 9988753211       234566677776542    222222211  22223344 5788


Q ss_pred             eeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCCCCCceeeeeecCCHHHHHHHHHHhc
Q 022769          190 AVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAF  266 (292)
Q Consensus       190 ~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~~~~l~hv~l~v~D~~~s~~fY~~~l  266 (292)
                      .|+|   +++++++|.+.|.++.      ..     .+++||.|+.|.|....      -.-.+.-.|.+++.+.+...+
T Consensus        83 ~~~d~~e~d~~~~~L~~~Gg~v~------~~-----G~v~D~fGv~W~i~~~~------~~~~~~d~d~~~~~r~~~am~  145 (163)
T 1u69_A           83 ATDDQAETDRLWNAIVDNGGEES------AC-----GWCRDKWGISWQITPRV------LSEAIASPDRAAARRAFEAMM  145 (163)
T ss_dssp             EESSHHHHHHHHHHHHHTTCEEC------ST-----TEEECTTSCEEEEEEHH------HHHHHTCSSHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhCCCEEE------EE-----EEEECCCCCEEEEEeEc------hHHhccCCCHHHHHHHHHHHH
Confidence            8887   6778899988888875      11     26999999999998531      001234578999999999999


Q ss_pred             CCEEEeee
Q 022769          267 GMELLRKR  274 (292)
Q Consensus       267 G~~~~~~~  274 (292)
                      +|+..|..
T Consensus       146 ~m~k~di~  153 (163)
T 1u69_A          146 TMGRIDIA  153 (163)
T ss_dssp             TCSSCCHH
T ss_pred             CCcceeHH
Confidence            99887753

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=97.97  E-value=6.5e-06  Score=71.18  Aligned_cols=68  Identities=13%  Similarity=0.135  Sum_probs=52.2

Q ss_pred             ccchhhhhhhhhcCCeeeeccCCCCCCCeeecCCccchhhhccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEE
Q 022769           68 FFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRK  143 (292)
Q Consensus        68 ~~g~~~~~~~d~dg~~~~~~~~~~~~~a~~~~~p~g~~~w~~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~  143 (292)
                      ..+.+.+.|.||||+.+++..+.....  ....|   .  ....+++|+||+|.|.|++++.+|| ++|||+...+
T Consensus       119 ~~g~~~~~f~DPdGn~iEl~~~~~~~~--~~~~~---~--~~~~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          119 FFNAYSCYVEDPSGNIIELISRQQAAP--VLDKP---F--SADQLLSIGEINITTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             TTTEEEEEEECTTCCEEEEEEESSSSC--CCCSC---C--CGGGCCEEEEEEEECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             cCCeEEEEEECCCCCEEEEEEeCCCCc--cccCC---C--CHHHCcEeeeEEEEeCCHHHHHHHH-HHcCCCcccC
Confidence            456788899999999999988654321  11111   1  1145889999999999999999999 9999998765

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=97.94  E-value=0.0002  Score=54.38  Aligned_cols=90  Identities=21%  Similarity=0.315  Sum_probs=67.6

Q ss_pred             CceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC----------CCCceeeeee
Q 022769          182 TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT----------PEPLCQVMLR  251 (292)
Q Consensus       182 ~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~----------~~~l~hv~l~  251 (292)
                      .+++|+++.|+|++++.+.+...|++........+.......++.. ++..+|+++....          ...+.|+.+.
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~~g~~hiaf~   84 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPDGEDSPINKTIKKGSTPYHICYE   84 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEESSTTCTHHHHTTTSCEEEEEEEE
T ss_pred             eeeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecCCCCChHHHHHhcCCceEEEEEE
Confidence            3799999999999999998888899876543333333444455554 6788999975432          2457799999


Q ss_pred             cCCHHHHHHHHHHhcCCEEEee
Q 022769          252 VGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       252 v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      |.|++++.+... ..|.++...
T Consensus        85 v~di~~~~~~l~-~~G~~~~~~  105 (133)
T 3hdp_A           85 VEDIQKSIEEMS-QIGYTLFKK  105 (133)
T ss_dssp             ESCHHHHHHHHT-TTTEEEEEE
T ss_pred             cCCHHHHHHHHH-HcCCccccC
Confidence            999999999986 489998753

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=97.91  E-value=1.5e-05  Score=60.86  Aligned_cols=46  Identities=48%  Similarity=0.834  Sum_probs=37.9

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCCC
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPN  289 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~  289 (292)
                      +++|+.|.|.|++++.+||+++|||++....+.++..+..++++.+
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~   47 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYG   47 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESS
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecC
Confidence            5899999999999999999999999999876555556666666543

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=97.87  E-value=1.5e-05  Score=65.00  Aligned_cols=49  Identities=37%  Similarity=0.571  Sum_probs=42.7

Q ss_pred             CCCceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCCCC
Q 022769          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPNK  290 (292)
Q Consensus       242 ~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~  290 (292)
                      ..+++|+.|.|.|++++++||+++|||++..+.+.++..|.++|++.+.
T Consensus        32 ~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~   80 (187)
T 3vw9_A           32 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYED   80 (187)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCC
T ss_pred             eeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCC
Confidence            3489999999999999999999999999998877777778888877653

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=97.86  E-value=2.1e-05  Score=62.21  Aligned_cols=42  Identities=14%  Similarity=0.092  Sum_probs=34.3

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEE
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSY  284 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~  284 (292)
                      -+|.|+.|.|.|+++|++||+++|||++..+...++.++...
T Consensus        25 Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~~~~~~   66 (155)
T 4g6x_A           25 MRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTV   66 (155)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTEEEEEE
T ss_pred             eEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCceEEEE
Confidence            379999999999999999999999999987655555444333

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=97.75  E-value=1.6e-05  Score=60.22  Aligned_cols=46  Identities=26%  Similarity=0.410  Sum_probs=35.9

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCCC
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPN  289 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~  289 (292)
                      +++|+.+.|+|++++.+||+++|||++......++.....+++..+
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~   50 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG   50 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC
Confidence            6899999999999999999999999998765444444444454443

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=97.72  E-value=5.2e-05  Score=58.20  Aligned_cols=44  Identities=23%  Similarity=0.325  Sum_probs=36.7

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcC
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLP  287 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~  287 (292)
                      +++|+.|.|+|++++.+||+++|||++......++..|..++++
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~   48 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP   48 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc
Confidence            58999999999999999999999999987665554456666665

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=97.69  E-value=3.5e-05  Score=59.90  Aligned_cols=48  Identities=42%  Similarity=0.702  Sum_probs=37.5

Q ss_pred             CCCceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCCC
Q 022769          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPN  289 (292)
Q Consensus       242 ~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~  289 (292)
                      ..+++|+.|.|+|++++.+||+++|||++....+.++..+...++..+
T Consensus         6 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~   53 (144)
T 2c21_A            6 SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYG   53 (144)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESS
T ss_pred             cceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcC
Confidence            357999999999999999999999999998765444445555555443

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=97.66  E-value=2.6e-05  Score=62.09  Aligned_cols=48  Identities=21%  Similarity=0.326  Sum_probs=38.1

Q ss_pred             CCCceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCCC
Q 022769          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPN  289 (292)
Q Consensus       242 ~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~  289 (292)
                      ..+|+||.|.|.|++++++||+++|||++..+.+.++.....+++..+
T Consensus         6 ~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g   53 (161)
T 3oa4_A            6 SNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG   53 (161)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET
T ss_pred             cCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC
Confidence            457999999999999999999999999998865545444555555433

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=97.65  E-value=5.1e-05  Score=57.33  Aligned_cols=36  Identities=31%  Similarity=0.665  Sum_probs=31.7

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCC
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD  278 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~  278 (292)
                      .+++|+.|.|+|++++.+||+++|||++..+...++
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~   39 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPK   39 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETT
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCC
Confidence            468999999999999999999999999997655444

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=97.64  E-value=6.1e-05  Score=58.27  Aligned_cols=47  Identities=26%  Similarity=0.480  Sum_probs=36.4

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCCC
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPN  289 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~  289 (292)
                      .+++|+.|.|.|++++.+||+++|||++....+.++..+...++..+
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~   54 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPA   54 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcC
Confidence            57999999999999999999999999998765444434444444433

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=97.59  E-value=0.0013  Score=51.58  Aligned_cols=92  Identities=23%  Similarity=0.324  Sum_probs=66.5

Q ss_pred             CceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeec-------------CCCCeEEEEEECCCCCEEEEEEcCCCC-----
Q 022769          182 TGFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPV-------------KGGNTVIAFIEDPDGYKFELLERGPTP-----  242 (292)
Q Consensus       182 ~g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~-------------~~g~~~~~y~~DPdG~~iel~e~~~~~-----  242 (292)
                      .+++|+++.|+|++++.+.+.+ .|+++.......             .......+++.. ++..+|+++....+     
T Consensus        18 ~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-g~~~leL~~~~~~~~~~~~   96 (159)
T 3gm5_A           18 RNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-GPLQLELIEPDENPSTWRE   96 (159)
T ss_dssp             GGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-TTEEEEEEEECSSSCHHHH
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec-CCEEEEEEEECCCCChhHH
Confidence            4899999999999999998876 898764321100             012334444544 57889999865322     


Q ss_pred             ------CCceeeeeecCCHHHHHHHHHHhcCCEEEeeec
Q 022769          243 ------EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRD  275 (292)
Q Consensus       243 ------~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~  275 (292)
                            .++.|+++.|.|++++.+..++ .|.++.....
T Consensus        97 ~l~~~~~g~~Hiaf~v~di~~~~~~l~~-~G~~~~~~~~  134 (159)
T 3gm5_A           97 FLDKNGEGIHHIAFVVKDMDRKVEELYR-KGMKVIQKGD  134 (159)
T ss_dssp             HHHHHCSEEEEEEEECSCHHHHHHHHHH-TTCCEEEEEE
T ss_pred             HhhcCCceEEEEEEEcCCHHHHHHHHHH-CCCcEeeccc
Confidence                  2678999999999999999975 7999976543

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=97.52  E-value=0.0043  Score=46.17  Aligned_cols=103  Identities=14%  Similarity=0.155  Sum_probs=69.7

Q ss_pred             ceEEEEEeeCCHHHHHHHHH-HcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC-------CCCceeeeeecCC
Q 022769          183 GFGHFGIAVEDVAKTVDLVK-AKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-------PEPLCQVMLRVGD  254 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~-~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~-------~~~l~hv~l~v~D  254 (292)
                      .++|+++.|.|++++.+.+. -.|.++..... .+.+.....++..++|..+++.+....       ...+.|+.+.|.|
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~hi~~~v~d   81 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYE-NKTKGFNSYFLSFEDGARLEIMSRTDVTGKTTGENLGWAHIAISTGT   81 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEE-EGGGTEEEEEEECSSSCEEEEEEETTCCCCCCSSCSSCCCEEEECSS
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccc-cCCCCccEEEEEcCCCcEEEEEecCCCCCCCCcCCCceEEEEEEcCC
Confidence            57899999999999999885 46988754321 222234556677677899999976522       2347899999999


Q ss_pred             ---HHHHHHHHHHhcCCEEEeeec-CCCCcEEEEEcC
Q 022769          255 ---LDRAINFYKKAFGMELLRKRD-NPDYKVNSYLLP  287 (292)
Q Consensus       255 ---~~~s~~fY~~~lG~~~~~~~~-~~~~~~~~~~~~  287 (292)
                         ++++.+...+ .|.++..... .+...+.+++..
T Consensus        82 ~~~v~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~D  117 (127)
T 3e5d_A           82 KEAVDELTEKLRQ-DGFAIAGEPRMTGDGYYESVVLD  117 (127)
T ss_dssp             HHHHHHHHHHHHH-TTCCEEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHHHHH-cCCeEecCcccCCCCcEEEEEEC
Confidence               5566666653 8999876432 333334444443

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=97.52  E-value=8e-05  Score=60.44  Aligned_cols=47  Identities=36%  Similarity=0.606  Sum_probs=37.9

Q ss_pred             CCCceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCC
Q 022769          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPP  288 (292)
Q Consensus       242 ~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~  288 (292)
                      ..+++|+.|.|.|++++.+||+++|||++....+.++..|..++++.
T Consensus        29 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~   75 (184)
T 2za0_A           29 DFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAY   75 (184)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEES
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecc
Confidence            45899999999999999999999999999876544444566666543

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=97.51  E-value=0.0014  Score=50.78  Aligned_cols=89  Identities=16%  Similarity=0.206  Sum_probs=67.0

Q ss_pred             CceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeec-------CCCCeEEEEEECCCCCEEEEEEcCC----------CCC
Q 022769          182 TGFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPV-------KGGNTVIAFIEDPDGYKFELLERGP----------TPE  243 (292)
Q Consensus       182 ~g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~-------~~g~~~~~y~~DPdG~~iel~e~~~----------~~~  243 (292)
                      .+++|+++.|.|++++.+.+.+ .|+++.......       ..+  ...++.-++|..+++++...          ...
T Consensus        18 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~   95 (156)
T 3kol_A           18 RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASG--KVANFITPDGTILDLFGEPELSPPDPNPEKTFT   95 (156)
T ss_dssp             CCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTT--SEEEEECTTSCEEEEEECTTCCCSSSSTTCCCS
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCC--cEEEEEeCCCCEEEEEecCCCCcCCCCCCCCCC
Confidence            4899999999999999999987 799876421110       112  23567777889999997643          124


Q ss_pred             CceeeeeecC--CHHHHHHHHHHhcCCEEEee
Q 022769          244 PLCQVMLRVG--DLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       244 ~l~hv~l~v~--D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .+.|+.+.|.  |++++.+...+ .|.++...
T Consensus        96 ~~~h~~~~v~~~d~~~~~~~l~~-~G~~~~~~  126 (156)
T 3kol_A           96 RAYHLAFDIDPQLFDRAVTVIGE-NKIAIAHG  126 (156)
T ss_dssp             SCCEEEEECCGGGHHHHHHHHHH-TTCCEEEE
T ss_pred             ceEEEEEEecHHHHHHHHHHHHH-CCCccccC
Confidence            6889999998  99999999975 79988643

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=97.26  E-value=0.0004  Score=53.78  Aligned_cols=33  Identities=24%  Similarity=0.424  Sum_probs=30.4

Q ss_pred             CCCceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       242 ~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      ..+|+|+.|.|.|++++.+||+++|||++....
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~   58 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLD   58 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEE
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEec
Confidence            357999999999999999999999999999865

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=97.26  E-value=0.0037  Score=48.21  Aligned_cols=90  Identities=24%  Similarity=0.362  Sum_probs=64.7

Q ss_pred             ceEEEEEeeCCHHHHHHHHHHcCCeeecCCeec----------CCCCeEEEEEECCCC-CEEEEEEc--CCC--------
Q 022769          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPV----------KGGNTVIAFIEDPDG-YKFELLER--GPT--------  241 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~----------~~g~~~~~y~~DPdG-~~iel~e~--~~~--------  241 (292)
                      ++.|+++.|+|++++.+.+++.|+++.......          +.......+++-++| ..+++++.  ...        
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~   90 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRTAP   90 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCTTCC
T ss_pred             ceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCcccccCCC
Confidence            789999999999999998877899875321100          112344566777766 78988863  111        


Q ss_pred             --CCCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          242 --PEPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       242 --~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                        ...+.|+.+.|.|++++.+...+ .|.++...
T Consensus        91 ~~~~g~~hl~~~v~d~~~~~~~l~~-~G~~~~~~  123 (153)
T 1ss4_A           91 VNALGYLRVMFTVEDIDEMVSRLTK-HGAELVGE  123 (153)
T ss_dssp             SSSBEEEEEEEEESCHHHHHHHHHH-TTCEESSC
T ss_pred             CCCCceEEEEEEeCCHHHHHHHHHH-CCCeecCC
Confidence              12467999999999999999975 79888643

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=97.23  E-value=0.0038  Score=46.27  Aligned_cols=89  Identities=18%  Similarity=0.211  Sum_probs=63.5

Q ss_pred             ceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC--------CCCCceeeeeecC
Q 022769          183 GFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP--------TPEPLCQVMLRVG  253 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~--------~~~~l~hv~l~v~  253 (292)
                      +++|+++.|+|++++.+.+.+ .|.++..... .+.+....+++.-+++ .++|.+...        ....+.|+.+.|.
T Consensus         5 ~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~~~~-~l~l~~~~~~~~~~~~~~~~g~~~~~~~v~   82 (126)
T 2p25_A            5 EIHHVAINASNYQATKNFYVEKLGFEVLRENH-RPEKNDIKLDLKLGSQ-ELEIFISDQFPARPSYPEALGLRHLAFKVE   82 (126)
T ss_dssp             CCCCEEEEESCHHHHHHHHTTTTCCEEEEEEE-EGGGTEEEEEEEETTE-EEEEEECTTCCCCCCSSCCSSCCCEEEECS
T ss_pred             ccceEEEEeCCHHHHHHHHHHhcCCEEEeecc-CCCCcceEEEEecCCe-EEEEEeccCCCCCCCCCCCccceEEEEEeC
Confidence            688999999999999998876 8998753211 1122333344555556 888986421        1236789999999


Q ss_pred             CHHHHHHHHHHhcCCEEEeee
Q 022769          254 DLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       254 D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      |++++.+...+ .|.++....
T Consensus        83 d~~~~~~~l~~-~G~~~~~~~  102 (126)
T 2p25_A           83 HIEEVIAFLNE-QGIETEPLR  102 (126)
T ss_dssp             CHHHHHHHHHH-TTCCCCCCE
T ss_pred             CHHHHHHHHHH-cCCcccccc
Confidence            99999999875 798876543

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=97.17  E-value=0.00038  Score=53.04  Aligned_cols=32  Identities=31%  Similarity=0.643  Sum_probs=29.5

Q ss_pred             CCCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       242 ~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      +.+++|+.|.|+|++++.+||+++|||++...
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~   38 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARR   38 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEE
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeecc
Confidence            45899999999999999999999999999764

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.07  E-value=0.0012  Score=66.11  Aligned_cols=116  Identities=16%  Similarity=0.240  Sum_probs=70.9

Q ss_pred             ceEEEEEEc---CCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecC-----------------
Q 022769          114 RMLHVVYRV---GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY-----------------  173 (292)
Q Consensus       114 ~i~Hv~L~V---~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~-----------------  173 (292)
                      +...+.+..   .-++++++||++.|++......   +...-..++.  ......++.+....                 
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (941)
T 3opy_B            9 GTSFITLFAPNISLLQASIDFYTNFLGFAIRKNS---NQKLFWLQLE--EDQNNVSIQLILDPEHAASVSQIDQNIRNLT   83 (941)
T ss_dssp             EEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSC---SCCC---EEC--CTTSCCEEEEECSSCSCHHHHHHHHHHHCCC
T ss_pred             ceeEEEEEeCCHHHHHHHHHHHHhhccceecccc---CCcceeEEEe--cCCCeEEEEEEeccccchhHHHHHHHHhhhh
Confidence            444455554   4589999999999999775432   2111123342  23334455544320                 


Q ss_pred             ---CCCCCcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          174 ---GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       174 ---~~~~~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                         ....| ++ -..|++|.+.|++++.+.|.+.+.++...|.+.   ....+|..||+||.|+|.+..
T Consensus        84 ~~~~~~dW-~~-~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~---~~~e~yt~DPlGNvIgfs~~~  147 (941)
T 3opy_B           84 RSLYRKDW-RS-IQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEI---SPFEVYTVDPLGSLIGFSGFK  147 (941)
T ss_dssp             ------------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSC---SCEEECCSSCCEEEECC-CCS
T ss_pred             cccccccc-cc-cCceEEEEeCCHHHHHHHHHhcCCccccCCCcC---CCceEEeECCCCCEEEEeccC
Confidence               01111 22 123999999999999999999999876555543   234688999999999998655

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=97.05  E-value=0.00046  Score=52.03  Aligned_cols=32  Identities=31%  Similarity=0.527  Sum_probs=29.7

Q ss_pred             CCCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       242 ~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      ..+++|+.|.|.|++++.+||+++|||++...
T Consensus         8 ~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~   39 (133)
T 3ey7_A            8 ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSF   39 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEEEEE
T ss_pred             ecccCEEEEEECCHHHHHHHHHHccCceEEEe
Confidence            45799999999999999999999999999875

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=97.04  E-value=0.00047  Score=53.78  Aligned_cols=31  Identities=23%  Similarity=0.550  Sum_probs=29.2

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .+++|+.|.|.|++++++||+++|||++...
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~   52 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTF   52 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEc
Confidence            4799999999999999999999999999886

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=97.03  E-value=0.012  Score=44.01  Aligned_cols=88  Identities=17%  Similarity=0.150  Sum_probs=64.3

Q ss_pred             CceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCC-CCEEEEEEcC-----CCCCCceeeeeecCC
Q 022769          182 TGFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPD-GYKFELLERG-----PTPEPLCQVMLRVGD  254 (292)
Q Consensus       182 ~g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPd-G~~iel~e~~-----~~~~~l~hv~l~v~D  254 (292)
                      .+++|+.+.|.|++++.+.+.+ .|+++..... .+. ....+.+..++ +..+++.+..     ..+....|+.+.|.|
T Consensus        12 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~d   89 (133)
T 4hc5_A           12 AYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQ-LDP-NMRFVTVVPPGAQTQVALGLPSWYEDGRKPGGYTGISLITRD   89 (133)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEE-EET-TEEEEEEECTTCSCEEEEECGGGCSSCCCSCEEEEEEEEESC
T ss_pred             cceeEEEEEECCHHHHHHHHHhCcCCcEeeecc-cCC-CceEEEEECCCCceEEEEecCcccccccCCCCeEEEEEEeCC
Confidence            3899999999999999998864 8988764321 112 23445555554 4678888643     234567899999999


Q ss_pred             HHHHHHHHHHhcCCEEEe
Q 022769          255 LDRAINFYKKAFGMELLR  272 (292)
Q Consensus       255 ~~~s~~fY~~~lG~~~~~  272 (292)
                      ++++.+...+ .|.++..
T Consensus        90 ~~~~~~~l~~-~G~~~~~  106 (133)
T 4hc5_A           90 IDEAYKTLTE-RGVTFTK  106 (133)
T ss_dssp             HHHHHHHHHH-TTCEESS
T ss_pred             HHHHHHHHHH-CCCEeec
Confidence            9999999975 7998874

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=96.99  E-value=0.00099  Score=52.11  Aligned_cols=31  Identities=29%  Similarity=0.483  Sum_probs=29.0

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .+++|+.|.|.|++++.+||+++|||++...
T Consensus        24 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~   54 (148)
T 2r6u_A           24 GRIVHFEIPFDDGDRARAFYRDAFGWAIAEI   54 (148)
T ss_dssp             CCEEEEEEEESSHHHHHHHHHHHHCCEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHccCcEEEEC
Confidence            4899999999999999999999999999873

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=96.99  E-value=0.00056  Score=53.25  Aligned_cols=32  Identities=25%  Similarity=0.467  Sum_probs=29.4

Q ss_pred             CCCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       242 ~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      ..+|+|+.|.|+|++++++||+++|||++...
T Consensus        25 i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~   56 (147)
T 3zw5_A           25 IRRLDHIVMTVKSIKDTTMFYSKILGMEVMTF   56 (147)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHHHHCCEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhcCCEEEec
Confidence            34799999999999999999999999999864

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=96.97  E-value=0.00072  Score=51.92  Aligned_cols=44  Identities=14%  Similarity=0.291  Sum_probs=32.2

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCC
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPP  288 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~  288 (292)
                      ...|+.+.|+|++++++||+++|||++..+... +..+..++++.
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~   54 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGL   54 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEES
T ss_pred             ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEec
Confidence            356788899999999999999999999875432 22344444443

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=96.96  E-value=0.00082  Score=53.16  Aligned_cols=35  Identities=34%  Similarity=0.634  Sum_probs=31.3

Q ss_pred             CCCCceeeeeecCCHHHHHHHHHHhcCCEEEeeec
Q 022769          241 TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRD  275 (292)
Q Consensus       241 ~~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~  275 (292)
                      ...+++|+.|.|+|++++.+||+++|||++....+
T Consensus         5 ~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~   39 (160)
T 3r4q_A            5 PPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLP   39 (160)
T ss_dssp             CCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEET
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecC
Confidence            34689999999999999999999999999998643

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=96.93  E-value=0.00068  Score=52.05  Aligned_cols=31  Identities=19%  Similarity=0.285  Sum_probs=28.7

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      +++|+.|.|+|++++.+||+++|||++....
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~   34 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYAS   34 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEG
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecC
Confidence            5899999999999999999999999998754

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=96.91  E-value=0.00074  Score=51.54  Aligned_cols=31  Identities=32%  Similarity=0.555  Sum_probs=28.7

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      +++|+.|.|+|++++.+||+++|||++....
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~   34 (135)
T 1nki_A            4 GLNHLTLAVADLPASIAFYRDLLGFRLEARW   34 (135)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEcC
Confidence            5899999999999999999999999998753

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=96.90  E-value=0.0061  Score=44.53  Aligned_cols=84  Identities=19%  Similarity=0.311  Sum_probs=61.5

Q ss_pred             ceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCCC-CCceeeeeec---CCHHH
Q 022769          183 GFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP-EPLCQVMLRV---GDLDR  257 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~~-~~l~hv~l~v---~D~~~  257 (292)
                      +++|+.+.|+|++++.+.+.+ .|.++...    .++.  ..++..++|..+++.+....+ ....|+.+.|   .|+++
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~----~~~~--~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~v~~~~d~~~   76 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGT----RGNA--FAVMRDNDGFILTLMKGKEVQYPKTFHVGFPQESEEQVDK   76 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEE----ETTT--EEEEECTTCCEEEEEECSSCCCCTTCCEEEECSSHHHHHH
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEecc----CCCc--EEEEEcCCCcEEEEEeCCCCCCCceeEEEEEcCCHHHHHH
Confidence            678999999999999998876 89887532    1111  245666778889988765432 4688999999   77777


Q ss_pred             HHHHHHHhcCCEEEee
Q 022769          258 AINFYKKAFGMELLRK  273 (292)
Q Consensus       258 s~~fY~~~lG~~~~~~  273 (292)
                      +.+... ..|.++...
T Consensus        77 ~~~~l~-~~G~~~~~p   91 (113)
T 1xqa_A           77 INQRLK-EDGFLVEPP   91 (113)
T ss_dssp             HHHHHH-HTTCCCCCC
T ss_pred             HHHHHH-HCCCEEecC
Confidence            777765 478876543

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=96.84  E-value=0.0008  Score=51.76  Aligned_cols=32  Identities=25%  Similarity=0.589  Sum_probs=29.1

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      .+++|+.|.|.|++++.+||+++|||++....
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~   34 (141)
T 1npb_A            3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARW   34 (141)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEE
T ss_pred             ceEEEEEEEeCCHHHHHHHHHhccCCEEEeec
Confidence            36899999999999999999999999998753

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=96.83  E-value=0.00057  Score=52.63  Aligned_cols=30  Identities=23%  Similarity=0.423  Sum_probs=28.1

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      +++|+.|.|+|++++.+||+++|||++...
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~   37 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIES   37 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGG
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecc
Confidence            789999999999999999999999999754

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=96.81  E-value=0.024  Score=42.12  Aligned_cols=88  Identities=14%  Similarity=0.157  Sum_probs=63.2

Q ss_pred             ceEEEEEee--CCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC-CCCCceeeeeecCCHHHH
Q 022769          183 GFGHFGIAV--EDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-TPEPLCQVMLRVGDLDRA  258 (292)
Q Consensus       183 g~~hia~~V--~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~-~~~~l~hv~l~v~D~~~s  258 (292)
                      +++|+.+.|  .|++++.+.+.+ .|+++...+........  .++.. +|..+++.+... .+....|+.+.|.|++++
T Consensus        10 ~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~--~~~~~-~~~~l~l~~~~~~~~~~~~~~~f~v~d~~~~   86 (126)
T 2qqz_A           10 GIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGG--CWFKC-GNQEIHIGVEQNFNPAKRAHPAFYVLKIDEF   86 (126)
T ss_dssp             EEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGGCC--EEEEE-TTEEEEEEECTTCCCCSSSCEEEEETTHHHH
T ss_pred             eeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCCCc--eEEEe-CCEEEEEEecCCCCCCCceEEEEEcCCHHHH
Confidence            789999999  799999998875 79988654321101111  33443 466788876432 345788999999999999


Q ss_pred             HHHHHHhcCCEEEeee
Q 022769          259 INFYKKAFGMELLRKR  274 (292)
Q Consensus       259 ~~fY~~~lG~~~~~~~  274 (292)
                      .+...+ .|.++....
T Consensus        87 ~~~l~~-~G~~~~~~~  101 (126)
T 2qqz_A           87 KQELIK-QGIEVIDDH  101 (126)
T ss_dssp             HHHHHH-TTCCCEEEC
T ss_pred             HHHHHH-cCCCccCCC
Confidence            999875 799887654

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=96.80  E-value=0.0007  Score=51.29  Aligned_cols=32  Identities=25%  Similarity=0.423  Sum_probs=28.0

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      .+++|+.|.|+|++++.+||+++|||++....
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~   34 (133)
T 2p7o_A            3 SGLSHITLIVKDLNKTTAFLQNIFNAEEIYSS   34 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEECC--
T ss_pred             ceEEEEEEEcCCHHHHHHHHHHhcCCEEeeec
Confidence            36899999999999999999999999998643

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=96.80  E-value=0.0011  Score=51.51  Aligned_cols=29  Identities=10%  Similarity=0.182  Sum_probs=27.2

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEe
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLR  272 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~  272 (292)
                      ++.|+.|.|+|++++.+||+++|||++..
T Consensus        21 ~~~hv~l~v~D~~~a~~FY~~~LG~~~~~   49 (148)
T 3bt3_A           21 RENGPVYFTKDMDKTVKWFEEILGWSGDI   49 (148)
T ss_dssp             EECCCEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             EeeeEEEEECCHHHHHHHHHhccCCEEEe
Confidence            68999999999999999999999999964

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=96.78  E-value=0.0011  Score=51.67  Aligned_cols=39  Identities=23%  Similarity=0.348  Sum_probs=31.6

Q ss_pred             eeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEc
Q 022769          248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLL  286 (292)
Q Consensus       248 v~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~  286 (292)
                      +.|.|+|++++++||+++|||++..+...++..+.+.++
T Consensus        10 i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~   48 (144)
T 3r6a_A           10 SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQI   48 (144)
T ss_dssp             EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEE
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEe
Confidence            889999999999999999999998775555555555544

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=96.75  E-value=0.0015  Score=50.71  Aligned_cols=32  Identities=19%  Similarity=0.291  Sum_probs=29.3

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      .+++|+.|.|.|++++.+||+++|||++....
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~   55 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESS   55 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEE
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCC
Confidence            38999999999999999999999999998753

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=96.73  E-value=0.0016  Score=49.70  Aligned_cols=32  Identities=31%  Similarity=0.491  Sum_probs=27.8

Q ss_pred             ceeeeeecCCHHHHHHHHHHhcCCEEEeeecC
Q 022769          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDN  276 (292)
Q Consensus       245 l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~  276 (292)
                      ...+.|.|+|++++++||+++|||++......
T Consensus         3 ~~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~   34 (137)
T 3itw_A            3 HMVVELAYTDPDRAVDWLVRVFGFRLLLRQPA   34 (137)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEESS
T ss_pred             eEEEEEEECCHHHHHHHHHHccCCEEEEEecC
Confidence            45688999999999999999999999976543

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=96.71  E-value=0.00083  Score=52.58  Aligned_cols=31  Identities=16%  Similarity=0.280  Sum_probs=27.6

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .+++|+.|.|+|++++++||+++|||++...
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~   35 (148)
T 3rhe_A            5 SDPNLVLFYVKNPAKSEEFYKNLLDTQPIES   35 (148)
T ss_dssp             --CEEEEEEESCHHHHHHHHHHHHTCCCSEE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHcCCEEecc
Confidence            3689999999999999999999999998765

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=96.68  E-value=0.0024  Score=49.62  Aligned_cols=37  Identities=22%  Similarity=0.248  Sum_probs=32.4

Q ss_pred             cCCCCCCceeeeeecCCHHHHHHHH---HHhcCCEEEeee
Q 022769          238 RGPTPEPLCQVMLRVGDLDRAINFY---KKAFGMELLRKR  274 (292)
Q Consensus       238 ~~~~~~~l~hv~l~v~D~~~s~~fY---~~~lG~~~~~~~  274 (292)
                      ..+...+++|+.|.|+|++++.+||   +++|||++....
T Consensus        14 ~~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~   53 (146)
T 3ct8_A           14 NLYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSW   53 (146)
T ss_dssp             CTTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             ccccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEec
Confidence            3355668999999999999999999   999999998754

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=96.66  E-value=0.00083  Score=49.84  Aligned_cols=30  Identities=10%  Similarity=0.019  Sum_probs=27.8

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      ++.|+.|.|+|++++.+||+++|||++...
T Consensus         5 ~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~   34 (118)
T 2i7r_A            5 NLNQLDIIVSNVPQVCADLEHILDKKADYA   34 (118)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTSCCSEE
T ss_pred             eeeEEEEEeCCHHHHHHHHHHHhCCeeEEe
Confidence            689999999999999999999999998753

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=96.63  E-value=0.0011  Score=50.43  Aligned_cols=29  Identities=14%  Similarity=0.455  Sum_probs=27.3

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .|+|+.|.|+|++++++||++ |||++...
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~   34 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRI-IGFQFTAS   34 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHH-HTCCCEEC
T ss_pred             eEEEEEEEcCCHHHHHHHHHH-CCCEEecc
Confidence            589999999999999999999 99999875

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=96.62  E-value=0.0011  Score=50.79  Aligned_cols=31  Identities=23%  Similarity=0.532  Sum_probs=28.7

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .++.|+.|.|+|++++.+||+++|||++...
T Consensus         7 ~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~   37 (141)
T 2qnt_A            7 MRFVNPIPFVRDINRSKSFYRDRLGLKILED   37 (141)
T ss_dssp             CCCCCCCCEESCHHHHHHHHHHTTCCCEEEE
T ss_pred             cccceEEEEECCHHHHHHHHHHhcCCEEEEE
Confidence            4789999999999999999999999999864

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=96.54  E-value=0.0012  Score=51.34  Aligned_cols=31  Identities=26%  Similarity=0.602  Sum_probs=28.5

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .+++|+.|.|.|++++.+||+++|||++...
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~   34 (150)
T 3bqx_A            4 QQVAVITLGIGDLEASARFYGEGFGWAPVFR   34 (150)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCCCSEE
T ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEeecC
Confidence            4789999999999999999999999998764

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=96.50  E-value=0.038  Score=41.56  Aligned_cols=85  Identities=9%  Similarity=0.110  Sum_probs=60.3

Q ss_pred             CceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC----CCCCceeeeeecCC--
Q 022769          182 TGFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP----TPEPLCQVMLRVGD--  254 (292)
Q Consensus       182 ~g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~----~~~~l~hv~l~v~D--  254 (292)
                      .++.|+.+.|.|++++.+..++ .|.++...   .+  .  ...+...+|..+.+.+...    ...+..|+.+.|.|  
T Consensus        12 ~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~---~~--~--~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~v~~~~   84 (132)
T 3sk2_A           12 ITPNLQLVYVSNVERSTDFYRFIFKKEPVFV---TP--R--YVAFPSSGDALFAIWSGGEEPVAEIPRFSEIGIMLPTGE   84 (132)
T ss_dssp             CCCCEEEEECSCHHHHHHHHHHHHTCCCSEE---CS--S--EEEEECSTTCEEEEESSSCCCCTTSCCCEEEEEEESSHH
T ss_pred             ceeeEEEEEECCHHHHHHHHHHHcCCeEEEc---CC--C--EEEEEcCCCcEEEEEeCCCCCcCCCCCcceEEEEeCCHH
Confidence            3789999999999999888876 78876422   11  1  2345556788999987541    12357889999987  


Q ss_pred             -HHHHHHHHHHh--cCCEEEee
Q 022769          255 -LDRAINFYKKA--FGMELLRK  273 (292)
Q Consensus       255 -~~~s~~fY~~~--lG~~~~~~  273 (292)
                       +++..+-..+.  .|.++...
T Consensus        85 dv~~~~~~l~~~~~~G~~~~~~  106 (132)
T 3sk2_A           85 DVDKLFNEWTKQKSHQIIVIKE  106 (132)
T ss_dssp             HHHHHHHHHHHCSSSCCEEEEE
T ss_pred             HHHHHHHHHHhhhcCCCEEeeC
Confidence             77777776543  78888753

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=96.43  E-value=0.05  Score=41.18  Aligned_cols=85  Identities=18%  Similarity=0.195  Sum_probs=61.4

Q ss_pred             ceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC-----------CCCCCceeeeee
Q 022769          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG-----------PTPEPLCQVMLR  251 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~-----------~~~~~l~hv~l~  251 (292)
                      ++.|+.+.|.|++++.+.+++.|+++....   +.+.  ...+.-++|..+.+.+..           +......|+.+.
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~---~~~~--~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~f~   78 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEA---DSAP--HTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFE   78 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGG---GGCS--EEEEECTTSCEEEEEEHHHHHHHCTTCCCCBSSCSEEEEEE
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecC---CCCc--eEEEEcCCCeEEEEecCccchhhCcccCCCCCCCeEEEEEE
Confidence            688999999999999998888898875331   1222  234444678889998631           123467899999


Q ss_pred             cC---CHHHHHHHHHHhcCCEEEee
Q 022769          252 VG---DLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       252 v~---D~~~s~~fY~~~lG~~~~~~  273 (292)
                      |.   |++++.+...+ .|.++...
T Consensus        79 v~~~~dv~~~~~~l~~-~G~~~~~~  102 (138)
T 2a4x_A           79 FPDTASVDKKYAELVD-AGYEGHLK  102 (138)
T ss_dssp             CSSHHHHHHHHHHHHH-TTCCEEEE
T ss_pred             eCCHHHHHHHHHHHHH-CCCceeeC
Confidence            99   88888888865 69887643

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=96.39  E-value=0.0031  Score=48.92  Aligned_cols=31  Identities=29%  Similarity=0.419  Sum_probs=25.7

Q ss_pred             CCCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       242 ~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      ..++.||.|.|+|+++|++||++ +|+.+...
T Consensus         7 ~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~   37 (149)
T 4gym_A            7 QSRLTFVNLPVADVAASQAFFGT-LGFEFNPK   37 (149)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHH-TTCEECGG
T ss_pred             CccEEEEEEEeCCHHHHHHHHHH-hCCCccee
Confidence            46899999999999999999987 56655543

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=96.27  E-value=0.0041  Score=46.65  Aligned_cols=29  Identities=17%  Similarity=0.332  Sum_probs=26.6

Q ss_pred             ceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          245 LCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       245 l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      ..|+.|.|+|++++.+||+++|||++...
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~   34 (124)
T 1xrk_A            6 SAVPVLTARDVAEAVEFWTDRLGFSRVFV   34 (124)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             ceeEEEEcCCHHHHHHHHHHccCceEEec
Confidence            46899999999999999999999999875

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=96.15  E-value=0.0018  Score=47.94  Aligned_cols=29  Identities=21%  Similarity=0.324  Sum_probs=26.8

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .+ |+.|.|+|++++.+||+++|||++...
T Consensus         8 ~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~   36 (119)
T 2pjs_A            8 RV-VANIATPEPARAQAFYGDILGMPVAMD   36 (119)
T ss_dssp             EE-EEEEECSCGGGGHHHHTTTTCCCEEEE
T ss_pred             EE-EEEEEcCCHHHHHHHHHHhcCCEEEec
Confidence            56 999999999999999999999999874

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=95.96  E-value=0.0065  Score=46.77  Aligned_cols=27  Identities=19%  Similarity=0.290  Sum_probs=24.4

Q ss_pred             eeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          247 QVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       247 hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .+.|.|+|++++.+||+++|||++...
T Consensus         8 ~~~l~v~Dl~~s~~FY~~~LG~~~~~~   34 (145)
T 2rk9_A            8 VPELYCFDINVSQSFFVDVLGFEVKYE   34 (145)
T ss_dssp             EEEEEESSHHHHHHHHHHTTCCEEEEE
T ss_pred             eEEEEECCHHHHHHHHHhccCCEEEee
Confidence            478899999999999999999999853

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=95.95  E-value=0.0055  Score=45.77  Aligned_cols=28  Identities=18%  Similarity=0.266  Sum_probs=25.6

Q ss_pred             eeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          246 CQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       246 ~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .++.|.|+|++++.+||+++|||++...
T Consensus         7 ~~~~l~v~D~~~a~~FY~~~LG~~~~~~   34 (122)
T 1qto_A            7 AVPVLTAVDVPANVSFWVDTLGFEKDFG   34 (122)
T ss_dssp             CCCEEEESSHHHHHHHHHHTTCCEEEEE
T ss_pred             eeEEEEcCCHHHHHHHHHhccCcEEeeC
Confidence            4688999999999999999999999864

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=95.52  E-value=0.0095  Score=45.27  Aligned_cols=29  Identities=21%  Similarity=0.482  Sum_probs=25.5

Q ss_pred             eeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          246 CQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       246 ~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      -+..|.|.|++++++||+++|||++....
T Consensus         9 ~~~~l~v~D~~~a~~FY~~~LG~~~~~~~   37 (134)
T 3fcd_A            9 ITPFLHIPDMQEALTLFCDTLGFELKYRH   37 (134)
T ss_dssp             EEEEEEESCHHHHHHHHTTTTCCEEEEEE
T ss_pred             ceeEEEECCHHHHHHHHHhccCcEEEEeC
Confidence            34678999999999999999999998753

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=94.95  E-value=0.71  Score=33.93  Aligned_cols=76  Identities=13%  Similarity=0.177  Sum_probs=55.5

Q ss_pred             EEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC--CCCCceeeeeecCCHHHHHHHH
Q 022769          185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP--TPEPLCQVMLRVGDLDRAINFY  262 (292)
Q Consensus       185 ~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~--~~~~l~hv~l~v~D~~~s~~fY  262 (292)
                      .++.+.|.|+++..+..++.|+++...    .. .  .+++.. +|..+++.+...  ......|+.+.|.|++++.+..
T Consensus         5 ~~~~l~v~D~~~a~~FY~~LG~~~~~~----~~-~--~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~~v~dv~~~~~~l   76 (126)
T 1ecs_A            5 ATPNLPSRDFDSTAAFYERLGFGIVFR----DA-G--WMILQR-GDLMLEFFAHPGLDPLASWFSCCLRLDDLAEFYRQC   76 (126)
T ss_dssp             EEEEEEESCHHHHHHHHHTTTCEEEEE----CS-S--EEEEEE-TTEEEEEEECTTCCGGGCCCEEEEEESCHHHHHHHH
T ss_pred             EEEEEEeCCHHHHHHHHHHCCCEEEec----CC-C--EEEEEe-CCEEEEEEeCCCCCCCCcceEEEEEECCHHHHHHHH
Confidence            478999999999999888899987632    11 1  233443 467788876432  1235678999999999999999


Q ss_pred             HHhcCCE
Q 022769          263 KKAFGME  269 (292)
Q Consensus       263 ~~~lG~~  269 (292)
                      .+ .|.+
T Consensus        77 ~~-~G~~   82 (126)
T 1ecs_A           77 KS-VGIQ   82 (126)
T ss_dssp             HH-TTCC
T ss_pred             HH-CCCc
Confidence            75 6887

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=94.81  E-value=0.11  Score=44.50  Aligned_cols=82  Identities=11%  Similarity=0.052  Sum_probs=48.8

Q ss_pred             ceEEEEEeeCC-HHHHHHHHHHcCCeeecCCeec--CCCCeEEEEEECCCCCEEEEEEcCC-C--CCCceeeeeecCCHH
Q 022769          183 GFGHFGIAVED-VAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGP-T--PEPLCQVMLRVGDLD  256 (292)
Q Consensus       183 g~~hia~~V~D-l~~~~~~L~~~G~~i~~~p~~~--~~g~~~~~y~~DPdG~~iel~e~~~-~--~~~l~hv~l~v~D~~  256 (292)
                      |+..+.+.|.. =....+-+++.|+.....-...  ..|.         |-..+++....- .  +..-.++.+.|.|++
T Consensus       125 g~~~i~~~v~~~N~~s~~ly~k~GF~~~g~~~~~~~~~g~---------d~~~~~l~~~~~~~~~~~~~~~~~l~v~D~~  195 (301)
T 2zw5_A          125 GLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPG---------PHEMVVLGKARAEEPLTTLAVITELPVRDVA  195 (301)
T ss_dssp             CCSEEEEEEESSCHHHHHHHHHTTCEEEEEEEECCTTSSS---------CEEEEEEEEESSCCSCEEEEEEEEEEESCHH
T ss_pred             CccEEEEEeCCCCHHHHHHHHHcCCcCcceehhhcccCCC---------CeEEEEEeHHHhhhhcccceeEEEEEeCCHH
Confidence            66677777643 3345667788898875321111  0111         112333332221 1  112346788999999


Q ss_pred             HHHHHHHHhcCCEEEee
Q 022769          257 RAINFYKKAFGMELLRK  273 (292)
Q Consensus       257 ~s~~fY~~~lG~~~~~~  273 (292)
                      ++.+||+++|||++...
T Consensus       196 ~a~~FY~~~lG~~~~~~  212 (301)
T 2zw5_A          196 ATLRLVEAALGARTAFA  212 (301)
T ss_dssp             HHHHHHHHHSCCEEEEE
T ss_pred             HHHHHHHHhcCCeEeee
Confidence            99999999999999843

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=94.16  E-value=0.028  Score=44.72  Aligned_cols=28  Identities=36%  Similarity=0.484  Sum_probs=24.0

Q ss_pred             eeeeeecCC--HHHHHHHHHHhcCCEEEee
Q 022769          246 CQVMLRVGD--LDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       246 ~hv~l~v~D--~~~s~~fY~~~lG~~~~~~  273 (292)
                      .+..|.|.|  ++++++||+++|||++...
T Consensus        26 i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~   55 (166)
T 1xy7_A           26 FKQMLLVEAQKVGDAVTFYKSAFGAIESGH   55 (166)
T ss_dssp             EEEEEEECTTCHHHHHHHHHHHHCCEEC--
T ss_pred             EEEEEEECCcCHHHHHHHHHHHhCCEEEEE
Confidence            567889999  9999999999999998754

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=93.38  E-value=0.089  Score=40.83  Aligned_cols=26  Identities=19%  Similarity=0.229  Sum_probs=23.2

Q ss_pred             eeeecC-CHHHHHHHHHHhcCCEEEee
Q 022769          248 VMLRVG-DLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       248 v~l~v~-D~~~s~~fY~~~lG~~~~~~  273 (292)
                      ..|.+. |+++|++||+++||+++...
T Consensus         7 p~L~v~~d~~~A~~FY~~vfG~~~~~~   33 (149)
T 1u6l_A            7 PYLIFNGNCREAFSCYHQHLGGTLEAM   33 (149)
T ss_dssp             EEEEESSCHHHHHHHHHHHHCSEEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEE
Confidence            567787 99999999999999999865

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=91.48  E-value=0.22  Score=37.72  Aligned_cols=26  Identities=31%  Similarity=0.507  Sum_probs=22.4

Q ss_pred             eeeecC--CHHHHHHHHHHhc-CCEEEee
Q 022769          248 VMLRVG--DLDRAINFYKKAF-GMELLRK  273 (292)
Q Consensus       248 v~l~v~--D~~~s~~fY~~~l-G~~~~~~  273 (292)
                      ..|.+.  |++++++||+++| |+++...
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~   37 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQI   37 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEE
Confidence            456776  9999999999999 9999853

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=89.11  E-value=0.72  Score=35.33  Aligned_cols=29  Identities=14%  Similarity=0.394  Sum_probs=22.7

Q ss_pred             ceeeeeecCCHHHHHHHHHHhc-CCEEEee
Q 022769          245 LCQVMLRVGDLDRAINFYKKAF-GMELLRK  273 (292)
Q Consensus       245 l~hv~l~v~D~~~s~~fY~~~l-G~~~~~~  273 (292)
                      +....+...|.+++++||+++| |+++...
T Consensus         6 i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~   35 (139)
T 1tsj_A            6 ITTFLMFNNQAEEAVKLYTSLFEDSEIITM   35 (139)
T ss_dssp             EEEEEECSSCHHHHHHHHHHHSSSCEEEEE
T ss_pred             eeEEEEECCCHHHHHHHHHHHcCCCEEEEE
Confidence            3334344569999999999999 9999854

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=84.06  E-value=1.1  Score=35.80  Aligned_cols=26  Identities=15%  Similarity=0.468  Sum_probs=22.0

Q ss_pred             eeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          249 MLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       249 ~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      .|.+.|.+++++||+++||.++..+.
T Consensus        30 yL~f~~a~eAi~FY~~vFG~~~~~~~   55 (172)
T 3l20_A           30 YIAFENSKEALAYYEEVFGATDVKRL   55 (172)
T ss_dssp             EEEESCHHHHHHHHHHHSCCEEEEEE
T ss_pred             EEEECCHHHHHHHHHHHcCCEEEEEE
Confidence            45666999999999999999987554

>1k4n_A Protein EC4020, protein YECM; structural genomics, A NEW fold of protein, PSI, protein structure initiative; 1.60A {Escherichia coli} SCOP: d.32.1.5

Probab=81.42  E-value=14  Score=29.76  Aligned_cols=76  Identities=18%  Similarity=0.163  Sum_probs=43.9

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCE-EEEEeeCCCCceEEE-EE----eeCCCCceEEEEEEecCCCCCCcCCCceEE
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMK-LLRKRDIPEDRYTNA-FL----GYGPEDSHFVVELTYNYGVDKYDIGTGFGH  186 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~-~~~~~~~~~~~~~~~-~l----~~g~~~~~~~l~l~~~~~~~~~~~g~g~~h  186 (292)
                      ..++|+.++|++.+.+.+|-+..+-.- +..+.... |+.... -+    .+++ ..--.+||..+.. ..+. -.|+-|
T Consensus        42 ~~~DHIalRvn~~~~Ae~~~~~l~~~G~llSen~IN-GRPI~l~~L~qPL~~~~-~~I~cvELP~P~~-K~Yp-~eGWEH  117 (192)
T 1k4n_A           42 LTADHISLRCHQNATAERWRRGFEQCGELLSENMIN-GRPICLFKLHEPVQVAH-WQFSIVELPWPGE-KRYP-HEGWEH  117 (192)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEET-TEEEEEEEEEEEEEETT-EEEEEEEEECCCS-SCCS-SCEEEE
T ss_pred             ccCcEEEEecCCHHHHHHHHHHHHHhchhhhccccC-CeeEEEEEcCCCceeCC-eEEEEEEcCCCCC-CCCC-CCCceE
Confidence            368999999999999999999877643 33322211 221111 11    1121 1112345554332 3333 359999


Q ss_pred             EEEeeC
Q 022769          187 FGIAVE  192 (292)
Q Consensus       187 ia~~V~  192 (292)
                      |.+.++
T Consensus       118 IE~Vlp  123 (192)
T 1k4n_A          118 IEIVLP  123 (192)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            999987

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=80.94  E-value=30  Score=35.03  Aligned_cols=49  Identities=16%  Similarity=0.193  Sum_probs=34.6

Q ss_pred             EEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       185 ~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      ..+.|.+.|+..+.+.|.+..+..  .|....   -..+|..||-||.+.|...
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~dp~~~~~~~~~~  173 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAEI--IPSKID---LVEFSTRDPMGDVISFSSY  173 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCCB--CCCC-----CCCEEEESSSEEEEECCSS
T ss_pred             ceEEEEeCcHHHHHHHhhhccccc--CCCCCC---ceeEEEecCCCCEEeeecC
Confidence            468899999999999998873332  222221   1237899999999998744

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=80.24  E-value=4.9  Score=34.49  Aligned_cols=34  Identities=9%  Similarity=0.247  Sum_probs=30.9

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKR  144 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~  144 (292)
                      ...+|.+|++.+.|++++.+.|+++||.....+.
T Consensus       187 Ga~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~  220 (274)
T 3p8a_A          187 KQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEEN  220 (274)
T ss_dssp             TTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEEC
T ss_pred             ccceEEEEEEEeCCHHHHHHHHHHHhCCCccccC
Confidence            4789999999999999999999999999987653

>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}

Probab=80.19  E-value=5.5  Score=35.23  Aligned_cols=52  Identities=23%  Similarity=0.169  Sum_probs=37.8

Q ss_pred             CCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCC---------eEEEEEECCCCC
Q 022769          180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN---------TVIAFIEDPDGY  231 (292)
Q Consensus       180 ~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~---------~~~~y~~DPdG~  231 (292)
                      .|..++|+..+|.|++++.+.|+++|+++....+.-+.+.         .....|.|.+|.
T Consensus       232 ~G~~iNHlT~rv~DId~v~~~m~~~G~~~k~~IeGsP~~lLrQTSf~A~~e~v~F~d~~G~  292 (340)
T 3iuz_A          232 EGNAFNHATDRVDDVFGLSEQQXALGRPMXDXVEVSGSGRVXQTAFRADTVRRQFIGAQGE  292 (340)
T ss_dssp             HTTSCSEEEEECSCHHHHHHHHHHTTCCBCSCCEECTTSSEEEEEBCCCEEEEEEECTTSC
T ss_pred             cCCccccccCCcCCHHHHHHHHHHcCCChhhhhcCCcccceeeeeccccceEEEEecCCCc
Confidence            3568899999999999999999999998765433333221         334567777663

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	292
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-30
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	1e-06
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	1e-27
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	6e-06
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	1e-25
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	4e-08
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	4e-19
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	2e-04
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	1e-18
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	7e-04
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	2e-18
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	0.004
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	7e-18
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	1e-17
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	9e-17
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	5e-05
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	1e-16
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	2e-16
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	2e-05
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	5e-16
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	1e-15
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	0.001
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	1e-14
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	7e-04
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	1e-14
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	2e-14
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	5e-12
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-04
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	6e-12
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	7e-04
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	1e-11
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	2e-11
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	2e-11
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	1e-10
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	2e-04
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	2e-10
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	2e-10
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	6e-10
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	8e-10
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	6e-09
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	3e-04
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	8e-09
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	1e-08
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	0.004
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	2e-07
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	3e-07
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	9e-07
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	2e-04
d1sqia2	210	d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxy	3e-06
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	3e-06
d1u6la_	137	d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudom	2e-05
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	4e-05
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	2e-04

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score =  109 bits (272), Expect = 2e-30
 Identities = 74/132 (56%), Positives = 98/132 (74%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 234 ELLERGPTPEPL 245
           EL+E       L
Sbjct: 122 ELIEEKDAGRGL 133

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 45.1 bits (105), Expect = 1e-06
 Identities = 21/39 (53%), Positives = 28/39 (71%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLL 286
            MLRVGDL R+I+FY K  GM+LLR  +NP+YK +   +
Sbjct: 6   TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFV 44

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score =  102 bits (253), Expect = 1e-27
 Identities = 68/132 (51%), Positives = 82/132 (62%), Gaps = 5/132 (3%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           RRMLH + RVGDLD++IKFYTE LGMK+LRK D+PED+YT  FLGYGPE S  V+ELTYN
Sbjct: 2   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 61

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
           YGV  Y     +GH  I VEDV + V  ++     +  E          +AF+ DPDGY 
Sbjct: 62  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGF-----MAFVVDPDGYY 116

Query: 233 FELLERGPTPEP 244
            ELL      E 
Sbjct: 117 IELLNEKTMMEK 128

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 42.7 bits (99), Expect = 6e-06
 Identities = 18/32 (56%), Positives = 24/32 (75%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
            M+RVGDLDR+I FY +  GM++LRK D P+ 
Sbjct: 7   TMIRVGDLDRSIKFYTERLGMKVLRKWDVPED 38

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.7 bits (242), Expect = 1e-25
 Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 26/153 (16%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE----- 168
            +   + RV D  K++ FYT  LGM L++K D P  +++  FL Y  ++     +     
Sbjct: 23  LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIA 82

Query: 169 ----------LTYNYGVDKYD---------IGTGFGHFGIAVEDVAKTVDLVKAKGGKVT 209
                     LT+N+G +  +            GFGH GIAV DV       +  G K  
Sbjct: 83  WALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFV 142

Query: 210 REPGPVKGGNTVIAFIEDPDGYKFELLERGPTP 242
           ++P    G    +AFI+DPDGY  E+L      
Sbjct: 143 KKPDD--GKMKGLAFIQDPDGYWIEILNPNKMA 173

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (117), Expect = 4e-08
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 4/55 (7%)

Query: 239 GPTPEP----LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPN 289
              P      L Q MLRV D  ++++FY +  GM L++K D P  K + Y L   
Sbjct: 14  DADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYE 68

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 79.6 bits (195), Expect = 4e-19
 Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 8/124 (6%)

Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG 174
            + +    G LD+ I+FY E L +K +       + Y      +G   + + +E T   G
Sbjct: 10  QIRIARPTGQLDEIIRFYEEGLCLKRIG-EFSQHNGYDGVM--FGLPHADYHLEFTQYEG 66

Query: 175 VDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 231
                +          V    ++A     +K  G +      P          IEDPDG+
Sbjct: 67  GSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGW 124

Query: 232 KFEL 235
           +   
Sbjct: 125 RIVF 128

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 38.7 bits (89), Expect = 2e-04
 Identities = 7/39 (17%), Positives = 16/39 (41%), Gaps = 4/39 (10%)

Query: 245 LCQVMLRV----GDLDRAINFYKKAFGMELLRKRDNPDY 279
                +R+    G LD  I FY++   ++ + +    + 
Sbjct: 6   FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNG 44

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 78.5 bits (192), Expect = 1e-18
 Identities = 17/135 (12%), Positives = 33/135 (24%), Gaps = 4/135 (2%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV--ELT 170
           +   H+     + ++   FY   LG++ ++     +D             S         
Sbjct: 5   KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFE 64

Query: 171 YNYGVDKYDIGTGFGHFGIAVEDVAKTVD-LVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
                  Y         G+ V           + +   V             + F ED +
Sbjct: 65  IPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQF-EDAE 123

Query: 230 GYKFELLERGPTPEP 244
           G +  LL        
Sbjct: 124 GLRLVLLVSNGEKVE 138

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 36.9 bits (84), Expect = 7e-04
 Identities = 4/25 (16%), Positives = 12/25 (48%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLR 272
           + +   + +   +FYK   G+  ++
Sbjct: 10  ISMVTKNANENNHFYKNVLGLRRVK 34

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 78.4 bits (192), Expect = 2e-18
 Identities = 22/143 (15%), Positives = 35/143 (24%), Gaps = 18/143 (12%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
               HV     D       ++  LG  L  + D+      +A L        F+    Y 
Sbjct: 12  LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYA 71

Query: 173 YGVDKYDI-----------------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPV 215
           +G D                     G       + V D         A G +    P  +
Sbjct: 72  HGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDL 131

Query: 216 KGGNTVIAFIEDPDGYKFELLER 238
             G   +A +E         +  
Sbjct: 132 GRG-FRLAEVELYGDVVLRYVSY 153

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 35.2 bits (80), Expect = 0.004
 Identities = 10/45 (22%), Positives = 13/45 (28%), Gaps = 2/45 (4%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRD--NPDYKVNSYLLPPNK 290
           V L   D   A   +    G  L  + D    +    S LL    
Sbjct: 17  VELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGS 61

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 77.2 bits (189), Expect = 7e-18
 Identities = 28/156 (17%), Positives = 47/156 (30%), Gaps = 27/156 (17%)

Query: 109 KSDK---RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 165
           KSDK   +R  H+ +  GD     + ++  LGM+   K D+      +A       D  F
Sbjct: 4   KSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRF 63

Query: 166 VVELTYNYGVDKYDIG-----------------------TGFGHFGIAVEDVAKTVDLVK 202
           +    Y+  +   +I                         G     I VED      +  
Sbjct: 64  LFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISV 123

Query: 203 AKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER 238
           A G   +  P  +      IA ++         +  
Sbjct: 124 ANGAIPSSPPIVLNEA-VTIAEVKLYGDVVLRYVSY 158

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 1e-17
 Identities = 28/140 (20%), Positives = 47/140 (33%), Gaps = 10/140 (7%)

Query: 109 KSDKRRML---HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 165
           K ++ R L    V + VG+  +   FY   +G + L  + +                  F
Sbjct: 3   KPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVF 62

Query: 166 VVELTYNYGVDKYDI-----GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK--GG 218
           V+    N    +        G G       VED    V   + +G K+ REP   +   G
Sbjct: 63  VLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFG 122

Query: 219 NTVIAFIEDPDGYKFELLER 238
               A ++        L+E+
Sbjct: 123 KVKFAVLQTYGDTTHTLVEK 142

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 73.8 bits (180), Expect = 9e-17
 Identities = 20/134 (14%), Positives = 37/134 (27%), Gaps = 11/134 (8%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R  H +    +L  T   +T+ LG  L  +           F          +    ++ 
Sbjct: 5   RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQF--------LSLSTKAHDV 56

Query: 174 GVDKYDIGTGFGHFGIAVEDV---AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
               +       H    +E      +  DL+      +   P      +    +  DP G
Sbjct: 57  AFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSG 116

Query: 231 YKFELLERGPTPEP 244
            + E+   G    P
Sbjct: 117 NRNEVFCGGDYNYP 130

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 40.7 bits (94), Expect = 5e-05
 Identities = 4/37 (10%), Positives = 13/37 (35%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSY 284
            ++   +L    + + K  G  L  +  + +    + 
Sbjct: 9   ALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQ 45

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 73.1 bits (178), Expect = 1e-16
 Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 12/136 (8%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVEL---- 169
            + HV Y   D D+  K+Y E  G   L + + PE       +    + +  + ++    
Sbjct: 7   CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMA 66

Query: 170 ------TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA 223
                 T    + K++   G  H    V+D+      ++ +G ++  +   +  G   I 
Sbjct: 67  PLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRIN 126

Query: 224 FI--EDPDGYKFELLE 237
           F+  +   G   EL +
Sbjct: 127 FMHPKSGKGVLIELTQ 142

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 71.9 bits (175), Expect = 2e-16
 Identities = 21/120 (17%), Positives = 39/120 (32%), Gaps = 8/120 (6%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTN-AFLGYGPEDSHFVVELTYNYGV 175
           H+ + V DL++  +        + +   D  +   +   F   G       + +    G 
Sbjct: 7   HMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAIMQGE 60

Query: 176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
              +       F I   D  +  + V   G  +      V+G    I +  D D + FEL
Sbjct: 61  KLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSI-YFYDDDNHMFEL 119

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 41.1 bits (95), Expect = 2e-05
 Identities = 6/32 (18%), Positives = 11/32 (34%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
           +   V DL+R     +  F    +   D   +
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYASDTEQF 39

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 71.6 bits (174), Expect = 5e-16
 Identities = 26/141 (18%), Positives = 46/141 (32%), Gaps = 18/141 (12%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE---------DSH 164
           RM +V   V  LD  I F+ E +G+ L  + ++  +                     D H
Sbjct: 9   RMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGH 67

Query: 165 FVVELTYNYGV-------DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG 217
             +EL+                   G+      VED+ + V  +   G ++  E    + 
Sbjct: 68  SRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN 127

Query: 218 GNTVIAFIEDPDGYKFELLER 238
               + +I   +G    L E 
Sbjct: 128 SYR-LCYIRGVEGILIGLAEE 147

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 71.0 bits (173), Expect = 1e-15
 Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 10/136 (7%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + M  VV+ VG+  +   +Y+   GM+L+            A        + FV+     
Sbjct: 6   KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK 65

Query: 173 YGVDKYDI--------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN--TVI 222
                           G G     I V D           G +   EP  +K  +   V+
Sbjct: 66  PATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVL 125

Query: 223 AFIEDPDGYKFELLER 238
           A I      +  L++R
Sbjct: 126 AAIATYGKTRHTLVDR 141

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 36.4 bits (83), Expect = 0.001
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKV 281
           V+  VG+  +A ++Y  AFGM+L+      +   
Sbjct: 11  VVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSR 44

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 67.3 bits (163), Expect = 1e-14
 Identities = 22/122 (18%), Positives = 37/122 (30%), Gaps = 9/122 (7%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R  HV  RV D+ K ++ Y E LG+  + + D                      +     
Sbjct: 7   RPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREADEPGMD 66

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
                      G   +  + + +    + A G  V + P             + P G+ F
Sbjct: 67  ---------FMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHF 117

Query: 234 EL 235
           EL
Sbjct: 118 EL 119

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 36.9 bits (84), Expect = 7e-04
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
           V LRV D+ +A+  Y +  G+  + + D    
Sbjct: 11  VQLRVLDMSKALEHYVELLGLIEMDRDDQGRV 42

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 67.4 bits (163), Expect = 1e-14
 Identities = 24/135 (17%), Positives = 43/135 (31%), Gaps = 10/135 (7%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R  ++   V DL K+ +FY + LG+ +  + +                  + V+     
Sbjct: 15  VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTIYLRSLEEFIHHNLVLRQGPI 70

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             V  +       +   +  +V       K  G +  R       G      +EDP G+ 
Sbjct: 71  AAVAAF------AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFP 124

Query: 233 FELLERGPTPEPLCQ 247
           +E        E L Q
Sbjct: 125 YEFFYETEHVERLTQ 139

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 68.0 bits (165), Expect = 2e-14
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 9/124 (7%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+ H      D+ +   +  E LG ++       +     A++          +      
Sbjct: 5   RLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGP 63

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDGY 231
            +      T   H  I +       D + A       E GP + G +   ++   DPDG+
Sbjct: 64  RMHHVAFATHEKHNIIQI------CDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 117

Query: 232 KFEL 235
           + E+
Sbjct: 118 RIEI 121

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 60.0 bits (144), Expect = 5e-12
 Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 11/123 (8%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + + H+   V DL K++ F+ E LG+ L         R+         +    +      
Sbjct: 3   QSLNHLTLAVSDLQKSVTFWHELLGLTLHA-------RWNTGAYLTCGDLWVCLSYDEAR 55

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             V   +       F +A ED       ++  G  VT        G +   +  DPDG+K
Sbjct: 56  QYVPPQESDYTHYAFTVAEEDFEPLSQRLEQAG--VTIWKQNKSEGASF--YFLDPDGHK 111

Query: 233 FEL 235
            EL
Sbjct: 112 LEL 114

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 38.8 bits (89), Expect = 1e-04
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
           + L V DL +++ F+ +  G+ L  + +   Y
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNTGAY 39

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 59.9 bits (144), Expect = 6e-12
 Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 14/119 (11%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H+   V DL  +I FY + LG +L             A+L  G       + L+      
Sbjct: 7   HLTLAVADLPASIAFYRDLLGFRLEA------RWDQGAYLELG----SLWLCLSREPQYG 56

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
                     FGIA  D A+    ++A G  V         G++   +  DPDG++ E 
Sbjct: 57  GPAADYTHYAFGIAAADFARFAAQLRAHG--VREWKQNRSEGDSF--YFLDPDGHRLEA 111

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.8 bits (84), Expect = 7e-04
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
           L  + L V DL  +I FY+   G  L  + D   Y
Sbjct: 5   LNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAY 39

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 59.8 bits (144), Expect = 1e-11
 Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 12/131 (9%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + M  V   V  LDK     TE  G   + + D        A       ++   + + Y 
Sbjct: 11  QGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ------EAIFQSIKGEAFGEIVVKYL 64

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
            G  +        H  I V    ++A   + VK +G   +   G +        +  + +
Sbjct: 65  DGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS---GIIDRFYFKSLYFRESN 121

Query: 230 GYKFELLERGP 240
           G  FE+   GP
Sbjct: 122 GILFEIATDGP 132

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 58.1 bits (139), Expect = 2e-11
 Identities = 18/123 (14%), Positives = 37/123 (30%), Gaps = 13/123 (10%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R +       +  +   FY + LGM              + ++           ++++  
Sbjct: 2   RRVVANIATPEPARAQAFYGDILGM---------PVAMDHGWIVTHASPLEAHAQVSFAR 52

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
              +   GT      I V++  +    +   G  +   P     G     F+ DP G   
Sbjct: 53  ---EGGSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLI 108

Query: 234 ELL 236
            +L
Sbjct: 109 NIL 111

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 58.4 bits (140), Expect = 2e-11
 Identities = 23/125 (18%), Positives = 38/125 (30%), Gaps = 14/125 (11%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           R + ++ + V D+     F T+ LG+      D                     V+    
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN------GDLFRIDSRAWRIAVQ---- 52

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDG 230
               + D     G+       +A+  D +K  G  VT     +     V   I   DP G
Sbjct: 53  --QGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFG 110

Query: 231 YKFEL 235
              E+
Sbjct: 111 LPLEI 115

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 55.5 bits (132), Expect = 1e-10
 Identities = 18/119 (15%), Positives = 34/119 (28%), Gaps = 13/119 (10%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H+   V D+    +F  +  G+     R        +         +   +         
Sbjct: 6   HLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRD---------NDGFILTLMKGKEV 56

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
           +Y      G    + E V K    +K  G  V          +    ++E P G+  E+
Sbjct: 57  QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPK----HAHAYTFYVEAPGGFTIEV 111

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 37.8 bits (86), Expect = 2e-04
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
           + L V D+  A  F +K FG+     R N   
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNAFA 38

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 56.9 bits (137), Expect = 2e-10
 Identities = 22/136 (16%), Positives = 39/136 (28%), Gaps = 12/136 (8%)

Query: 113 RRMLHVVYRV--GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELT 170
           + + H+ + V  G +     FY +    +  R  DI  +            D    + L 
Sbjct: 4   KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLN 63

Query: 171 YNYGVDKYDIG--------TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVI 222
                    I          G  H     +D+ KT D +K  G +      P      ++
Sbjct: 64  EESSKGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFM--TAPPDTYYEML 121

Query: 223 AFIEDPDGYKFELLER 238
                  G   + L+ 
Sbjct: 122 EGRLPDHGEPVDQLQA 137

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 55.5 bits (132), Expect = 2e-10
 Identities = 22/130 (16%), Positives = 36/130 (27%), Gaps = 4/130 (3%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVEL-TYN 172
           R+      V D+ K+++FY +            P              D+   V      
Sbjct: 2   RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
           +                    V K    +   G +   +P     G    A ++DPDG  
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPDGNV 120

Query: 233 FELLERGPTP 242
            +L    P P
Sbjct: 121 VDLFA--PLP 128

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 54.8 bits (131), Expect = 6e-10
 Identities = 26/118 (22%), Positives = 39/118 (33%), Gaps = 9/118 (7%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H V  V D  K + FYTE LG  L    DI     T+    +   +          + + 
Sbjct: 13  HFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFPIP 72

Query: 177 KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 231
           K        HF +     +DV    D + A G   +   G      T+  + + P   
Sbjct: 73  K-----RIHHFMLQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPM 124

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 53.8 bits (128), Expect = 8e-10
 Identities = 19/125 (15%), Positives = 38/125 (30%), Gaps = 14/125 (11%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R+ ++ + V D+     F T+ +G+               A            V+    
Sbjct: 3   ERLGYLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQ---- 52

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDG 230
               + D     G        + +  D ++  G   TR    +     V+  +  +DP G
Sbjct: 53  --PGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFG 110

Query: 231 YKFEL 235
              E+
Sbjct: 111 LPLEI 115

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 51.1 bits (121), Expect = 6e-09
 Identities = 16/120 (13%), Positives = 28/120 (23%), Gaps = 8/120 (6%)

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV 175
              V    D+ + ++F+T+ LG   +   D        A +                   
Sbjct: 6   AVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQVVPD 59

Query: 176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
           +        G   +  E         +   G    E      G      + DP G     
Sbjct: 60  NTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGRE--FALRDPAGNCVHF 117

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 37.7 bits (86), Expect = 3e-04
 Identities = 6/31 (19%), Positives = 12/31 (38%)

Query: 249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
           +L   D+  A+ F+    G   +   D+   
Sbjct: 9   VLTARDVAEAVEFWTDRLGFSRVFVEDDFAG 39

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 50.6 bits (120), Expect = 8e-09
 Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 12/121 (9%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
            +   V ++ +        L  K         D   + F  +       ++  + N+ V 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKA--------DYANDGFAQFTIGSHCLML--SQNHLVP 54

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 236
             +  +G     I VEDV +    +   G KV   P     G      ++ P G   +  
Sbjct: 55  LENFQSGI-IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLVLDFY 112

Query: 237 E 237
            
Sbjct: 113 R 113

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 52.4 bits (125), Expect = 1e-08
 Identities = 21/139 (15%), Positives = 44/139 (31%), Gaps = 25/139 (17%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE--DRYT---NAFLGYGPEDSHFVV 167
            R  H+V  V +L     ++    G     +    +     +   +  L    E+    +
Sbjct: 8   SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPL 67

Query: 168 -ELTYNYGVD-------KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN 219
            E  +             +  G G  H  +A +DV +T+  ++A+      E        
Sbjct: 68  NEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFE-------- 119

Query: 220 TVIAFIEDPDGYKFELLER 238
               F+  P    ++ + R
Sbjct: 120 ----FMAPPTSDYYDGVRR 134

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 35.5 bits (81), Expect = 0.004
 Identities = 6/35 (17%), Positives = 10/35 (28%)

Query: 252 VGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLL 286
           V +L  A  ++    G     +    D       L
Sbjct: 17  VPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGL 51

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 47.3 bits (112), Expect = 2e-07
 Identities = 16/134 (11%), Positives = 36/134 (26%), Gaps = 11/134 (8%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
            + +           + E +G        +   R  N  L Y   + + ++    N    
Sbjct: 12  FIEFASPTPGTLEPIF-EIMGFTK-----VATHRSKNVHL-YRQGEINLILNNEPNSIAS 64

Query: 177 KY--DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 234
            +  + G         V+D  K  +     G +              +  I+   G    
Sbjct: 65  YFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHI--DTGPMELNLPAIKGIGGAPLY 122

Query: 235 LLERGPTPEPLCQV 248
           L++R      +  +
Sbjct: 123 LIDRFGEGSSIYDI 136

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 46.1 bits (108), Expect = 3e-07
 Identities = 22/124 (17%), Positives = 38/124 (30%), Gaps = 20/124 (16%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
              D D T  FY   LG  +              F   G         +   +     D 
Sbjct: 9   PSRDFDSTAAFYER-LGFGI-------------VFRDAGWMILQRGDLMLEFFAHPGLDP 54

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV------IAFIEDPDGYKFE 234
              +    + ++D+A+     K+ G + T    P      +      +A + DPDG    
Sbjct: 55  LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLR 114

Query: 235 LLER 238
           L++ 
Sbjct: 115 LIQN 118

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 45.3 bits (106), Expect = 9e-07
 Identities = 14/128 (10%), Positives = 27/128 (21%), Gaps = 9/128 (7%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-------DRYTNAFLGYGPEDSHFVVEL 169
            ++     +   + FY    G         P+           ++ L             
Sbjct: 10  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS 69

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
           +          G+G     +  +D    V      G                   + DP 
Sbjct: 70  SLPGFSTAKSEGSGVTFL-LGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPF 127

Query: 230 GYKFELLE 237
           G  +   E
Sbjct: 128 GVTWIFAE 135

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.4 bits (88), Expect = 2e-04
 Identities = 8/33 (24%), Positives = 13/33 (39%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
            +++    +  A+ FYK AFG         P  
Sbjct: 10  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKR 42

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 3e-06
 Identities = 16/115 (13%), Positives = 39/115 (33%), Gaps = 16/115 (13%)

Query: 113 RRMLHVVYRV--GDLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVE 168
             + H+V      +++   ++Y + L        D  +    Y+ +       +    ++
Sbjct: 23  EIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYS-SLRSIVVANYEESIK 81

Query: 169 LTYNYGVD-----------KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP 212
           +  N                Y+ G G  H  +  ED+  T+  ++ +G +    P
Sbjct: 82  MPINEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP 136

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 43.6 bits (101), Expect = 3e-06
 Identities = 15/124 (12%), Positives = 27/124 (21%), Gaps = 8/124 (6%)

Query: 112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 171
           K      V    D+   + F+ + LG +                  +     H +V    
Sbjct: 3   KFLGAVPVLTAVDVPANVSFWVDTLGFEKDFGDRDFAGVRRGDIRLHISRTEHQIVADNT 62

Query: 172 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 231
           +  ++  D       +                  G      G    G      + DP G 
Sbjct: 63  SAWIEVTDPDALHEEW------ARAVSTDYADTSGPAMTPVGESPAGRE--FAVRDPAGN 114

Query: 232 KFEL 235
               
Sbjct: 115 CVHF 118

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 41.3 bits (96), Expect = 2e-05
 Identities = 18/123 (14%), Positives = 36/123 (29%), Gaps = 12/123 (9%)

Query: 123 GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELT-YNYGVDKYDIG 181
           G+  +    Y + LG  L       +            +D      L   ++ +   D  
Sbjct: 12  GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPA-DWKDKIMHARLVVGSFALMASDNH 70

Query: 182 TGFGHFG---------IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             + + G         +  +  A+ +    A+GG V    GP     +      D  G  
Sbjct: 71  PAYPYEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASF-GMFTDRFGVA 129

Query: 233 FEL 235
           + +
Sbjct: 130 WMV 132

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 14/110 (12%)

Query: 117 HVVYRV--GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF------VVE 168
           H V  V  G +++ + FY + +G   +++    +     + L               + E
Sbjct: 9   HCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINE 68

Query: 169 LTYNYGVD------KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP 212
                         ++  G G  H  +   D+ +TV  ++A G +    P
Sbjct: 69  PALAKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP 118

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 12/102 (11%), Positives = 30/102 (29%), Gaps = 13/102 (12%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE------DRYTNAFLGYGPEDSHFVVELT 170
           H V  V +L   + +     G     +    +         +             + E  
Sbjct: 25  HAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPV 84

Query: 171 YNYGVD-------KYDIGTGFGHFGIAVEDVAKTVDLVKAKG 205
           +            +++ G G  H  +  ED+ +T+  ++ + 
Sbjct: 85  HGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRS 126

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	292
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.84
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.81
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.81
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.81
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.8
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.78
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.77
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.77
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.75
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.74
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.74
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.73
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.72
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.72
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.72
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.71
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.71
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.71
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.7
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.69
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.69
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.67
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.65
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.64
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.64
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.63
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.46
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.45
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.37
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.36
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.33
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.2
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.14
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.08
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.04
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	98.88
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.84
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.59
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	98.1
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	98.01
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	97.99
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	97.97
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	97.72
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	97.6
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	97.6
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	97.57
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	97.54
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	97.5
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	97.37
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	97.34
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	97.3
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	97.26
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	97.24
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	97.23
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	97.23
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	97.22
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	97.2
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	97.16
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	97.16
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	97.11
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	96.94
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	96.62
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	96.62
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	96.59
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	96.49
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	96.0
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	95.91
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	95.76
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	95.54
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	95.34
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	95.2
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	95.02
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	94.98
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	94.69
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	94.34
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	94.1
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	87.91
d1k4na_	190	Hypothetical protein YecM (EC4020) {Escherichia co	83.02

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=7.5e-20  Score=140.84  Aligned_cols=133  Identities=56%  Similarity=1.035  Sum_probs=99.9

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~  192 (292)
                      |+|+|++|.|+|+++|++||+++|||++........................................+.+..|+++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            68999999999999999999999999998876655555555555444333333333333333334445568899999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCCCCCc
Q 022769          193 DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPL  245 (292)
Q Consensus       193 Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~~~~l  245 (292)
                      +++++.++++++|..+..+|...+.+...++|++||||++|||++.......+
T Consensus        81 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~~~  133 (135)
T d1f9za_          81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGL  133 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-------
T ss_pred             HHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccccC
Confidence            99999999999999998888888877888899999999999999987654433

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.81  E-value=1.5e-19  Score=146.54  Aligned_cols=124  Identities=22%  Similarity=0.221  Sum_probs=88.8

Q ss_pred             ccCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEE
Q 022769          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (292)
Q Consensus       109 ~~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia  188 (292)
                      +.+|++|+||+|.|+|++++.+||+++|||++..+.+    . ...+...++......+......+... ....+++||+
T Consensus         7 ~~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~HiA   80 (170)
T d1zswa2           7 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----Q-EAIFQSIKGEAFGEIVVKYLDGPTEK-PGRGSIHHLA   80 (170)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----S-EEEEESSTTCSTTCEEEEECCSSBCB-CCBTCEEEEE
T ss_pred             hHHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----c-eEEEEeccCccceEEEeccccccccc-cCccccceEE
Confidence            3568999999999999999999999999999987743    2 22343333332222222222222222 2223799999


Q ss_pred             EeeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC
Q 022769          189 IAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       189 ~~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                      |.|+|   ++++++++++.|+++.. +  ..++..+++||+|||||+|||++.+|.
T Consensus        81 f~V~~~~~l~~~~~~l~~~G~~~~~-~--~~~~~~~s~Yf~DPdG~~iEl~t~~pg  133 (170)
T d1zswa2          81 IRVKNDAELAYWEEQVKQRGFHSSG-I--IDRFYFKSLYFRESNGILFEIATDGPG  133 (170)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCCCC-C--EECSSEEEEEEECTTCCEEEEEEEEEC
T ss_pred             EEeCChHHHHHHHHHHHhcCCCccc-c--ccCCCEEEEEEECCCCcEEEEEECCCC
Confidence            99986   77889999999999753 2  334678899999999999999987653

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.81  E-value=4.6e-19  Score=142.43  Aligned_cols=148  Identities=17%  Similarity=0.198  Sum_probs=106.5

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      ..+|++||+|.|+|++++++||+++|||++..+...........++..+....... . ....      ...+++|++|.
T Consensus         2 ~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~------~~~~~~h~~~~   73 (162)
T d1mpya2           2 AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVA-F-IHHP------EKGRLHHVSFH   73 (162)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEE-E-EECS------SSSEEEEEEEE
T ss_pred             CcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccccccccc-c-cccC------CCCccceeEEE
Confidence            46799999999999999999999999999988766655555556665544333222 2 2211      12379999999


Q ss_pred             eCCHH---HHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCCCCC-ceeeeeecCCHHHHHHHHHHhc
Q 022769          191 VEDVA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP-LCQVMLRVGDLDRAINFYKKAF  266 (292)
Q Consensus       191 V~Dl~---~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~~~~-l~hv~l~v~D~~~s~~fY~~~l  266 (292)
                      +.+++   +++++|+++|+++..+|..+..+...++|++|||||+|||++.+....+ -..+........+++.|+...|
T Consensus        74 ~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~~~~p~~~p~~w~~~~~~~~~~~~~r~l  153 (162)
T d1mpya2          74 LETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDRIL  153 (162)
T ss_dssp             CSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCBCCTTSCCEEEEGGGHHHHHCTTTCSC
T ss_pred             EeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCcccCCCCCCccCCHHHCCceeEecCCCC
Confidence            98754   7789999999999888888777778899999999999999987643211 1113334455666666665543

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.81  E-value=9.2e-19  Score=137.38  Aligned_cols=128  Identities=14%  Similarity=0.151  Sum_probs=92.4

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCC-CceEEEEEeeCCCCceEEEEEEecCCCCCCcCC-CceEEEE
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG-TGFGHFG  188 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g-~g~~hia  188 (292)
                      .+.+|+||+|.|+|++++++||+++|||++..+....+ .....++++......+..+.+.......+...+ .+++|++
T Consensus         3 ~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hia   82 (144)
T d1zswa1           3 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIG   82 (144)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEE
Confidence            47899999999999999999999999999987754332 222333444433344445555544333222223 3689999


Q ss_pred             EeeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC
Q 022769          189 IAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       189 ~~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                      |.|+|   ++++.++|++.|+.+.. +...  ++..++||+||||+.|||++..+.
T Consensus        83 f~v~~~~~l~~~~~~l~~~gv~~~~-~~~~--~~~~~~yf~DPdG~~iEl~~~~~~  135 (144)
T d1zswa1          83 LLVPSEDSLHYWKERFEKFDVKHSE-MTTY--ANRPALQFEDAEGLRLVLLVSNGE  135 (144)
T ss_dssp             EEESCHHHHHHHHHHHHHTTCEECC-SEEE--TTEEEEEEECTTCCEEEEEECTTC
T ss_pred             EecCCchhHHHHhhhhhccceeeeC-cccc--CCeEEEEEECCCCCEEEEEEeCCC
Confidence            99998   67789999999998743 3333  467789999999999999987654

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.80  E-value=1.5e-18  Score=136.42  Aligned_cols=127  Identities=19%  Similarity=0.246  Sum_probs=93.7

Q ss_pred             cCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCC-----------CCceEEEEEeeCCCCceEEEEEEecC-CC--
Q 022769          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP-----------EDRYTNAFLGYGPEDSHFVVELTYNY-GV--  175 (292)
Q Consensus       110 ~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~l~~g~~~~~~~l~l~~~~-~~--  175 (292)
                      +.++||+||+|.|+|++++.+||++ |||++..+....           ......+++.......++.+...... ..  
T Consensus         5 ~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~   83 (149)
T d1ss4a_           5 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   83 (149)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             CCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCccc
Confidence            4578999999999999999999998 999988764321           23345566655544433333222211 11  


Q ss_pred             --CCCcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          176 --DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       176 --~~~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                        .......|++|++|.|+|++++.++|+++|+++..+|....+ ..+.+|++||||+.|||+|+
T Consensus        84 ~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          84 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEE
T ss_pred             ccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEc
Confidence              111123489999999999999999999999999888776654 56778999999999999985

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.78  E-value=1.3e-18  Score=131.71  Aligned_cols=114  Identities=20%  Similarity=0.180  Sum_probs=88.9

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~  192 (292)
                      |+|+|+.|.|+|+++|.+||+++||+++....+    .  .+.+..++    ..+.+......+....+.| .+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~--~~~~~~g~----~~l~l~~~~~~~~~~~~~~-~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----G--FAQFTIGS----HCLMLSQNHLVPLENFQSG-IIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----T--EEEEEETT----EEEEEESSCSSSCCCCCSC-EEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----C--eEEEEEcC----ceeeeeecccCCCCCCCcc-eEEEEEEC
Confidence            579999999999999999999999999866532    2  35555554    3455555443333233334 47999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          193 DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       193 Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      |+++++++|+++|+++..+|...++| .+.+|++|||||.|||++.
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~g-~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDWG-TESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTS-CEEEEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHHHhhccccccceEEeeCC-eEEEEEECCCCCEEEEEEe
Confidence            99999999999999998888877764 4678999999999999975

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.77  E-value=2.2e-18  Score=133.45  Aligned_cols=113  Identities=20%  Similarity=0.239  Sum_probs=88.5

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      |++|+||+|.|+|++++++||+++|||++..+..      ..++++.+..++.  +.+....       ..++.|++|.|
T Consensus         2 I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~--l~l~~~~-------~~~~~h~~f~v   66 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWR--IAVQQGE-------VDDLAFAGYEV   66 (131)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCS--EEEEECT-------TCEEEEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCCceE--EEEecCC-------CCCceEEEEEE
Confidence            6799999999999999999999999999987643      2477777654433  3443321       23899999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCeecC--CCCeEEEEEECCCCCEEEEEEcC
Q 022769          192 ED---VAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       192 ~D---l~~~~~~L~~~G~~i~~~p~~~~--~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      .+   ++++.++|+++|+++...+....  .+...++|++|||||+||++...
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~  119 (131)
T d1lgta1          67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (131)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             ccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCC
Confidence            65   77889999999999987765432  35567899999999999998643

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.77  E-value=2.1e-18  Score=136.02  Aligned_cols=117  Identities=22%  Similarity=0.284  Sum_probs=90.2

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .+++|+||.|.|+|++++++||+++|||++.....      ...++.......++.+.+....       ..+++|++|.
T Consensus        13 ~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~h~~~~   79 (146)
T d1f1ua1          13 DIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQGP-------IAAVAAFAYR   79 (146)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-------SCEEEEEEEE
T ss_pred             CCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC------CceeeecccccccceeeccccC-------CCCCceeeEe
Confidence            47899999999999999999999999999987643      1244443333333333333321       2488999999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC
Q 022769          191 VE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       191 V~---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                      +.   |++++.++|+++|+++...+.....+..+++||+||+|++|||+....
T Consensus        80 ~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e  132 (146)
T d1f1ua1          80 VKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETE  132 (146)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             eccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEecc
Confidence            97   588899999999999987777776666678999999999999997643

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.75  E-value=6.8e-18  Score=130.87  Aligned_cols=113  Identities=16%  Similarity=0.193  Sum_probs=88.0

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      |.+|+||+|.|+|++++++||+++|||++..+..      ..++++.+...+.  +.+...       ...+++|++|.|
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~--l~~~~~-------~~~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWR--IAVQPG-------ELDDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCS--EEEEEC-------TTCEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeeccee--eeeecc-------CCCCceEEEEEe
Confidence            6799999999999999999999999999987643      2577777654433  333332       124899999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCeecC--CCCeEEEEEECCCCCEEEEEEcC
Q 022769          192 ED---VAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       192 ~D---l~~~~~~L~~~G~~i~~~p~~~~--~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      .+   ++++.++++++|+++...+....  .+...++|++||+||+|||+...
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~  119 (132)
T d1kw3b1          67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (132)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             ccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECC
Confidence            64   78899999999999987665432  23456789999999999998653

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.74  E-value=1.9e-17  Score=129.16  Aligned_cols=130  Identities=18%  Similarity=0.282  Sum_probs=91.5

Q ss_pred             cCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEee--CCCCceEEEEEEecCCCCC--------Cc
Q 022769          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGY--GPEDSHFVVELTYNYGVDK--------YD  179 (292)
Q Consensus       110 ~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~--g~~~~~~~l~l~~~~~~~~--------~~  179 (292)
                      +.+++|+||+|.|+|+++|++||+++||++...............+...  ........+++.+......        ..
T Consensus         3 ~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~   82 (145)
T d1jc4a_           3 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   82 (145)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccC
Confidence            3578999999999999999999999999999877655444433333321  1122334566655322211        12


Q ss_pred             CCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEE--ECCCCCEEEEEEcC
Q 022769          180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDGYKFELLERG  239 (292)
Q Consensus       180 ~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~--~DPdG~~iel~e~~  239 (292)
                      ...|++|+||.|+|+++++++|+++|+++..++.....++...+|+  +||+|++|||+|.+
T Consensus        83 ~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          83 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            3458999999999999999999999999865433332233444555  79999999999863

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.74  E-value=3.4e-17  Score=133.17  Aligned_cols=120  Identities=20%  Similarity=0.237  Sum_probs=92.3

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .++||+||+|.|+|++++++|| ++|||++......+.+....+++..+...+  .+.+....       ..+++|++|.
T Consensus         2 ~i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~-------~~~~~H~~f~   71 (176)
T d1f1ua2           2 ELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVH--DTALTGGN-------GPRMHHVAFA   71 (176)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSC--SEEEEESS-------BSEEEEEEEE
T ss_pred             ceeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcccc--ceeccccc-------CCCccceeEE
Confidence            3689999999999999999999 679999988766666666667776554433  33333321       2489999999


Q ss_pred             eCC---HHHHHHHHHHcCCee--ecCCeecCCCCeEEEEEECCCCCEEEEEEcCC
Q 022769          191 VED---VAKTVDLVKAKGGKV--TREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       191 V~D---l~~~~~~L~~~G~~i--~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                      +.+   +.++.++|+++|+..  ...|+.+..+...++|++|||||+||++....
T Consensus        72 ~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          72 THEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             CSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             eccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence            986   455677999999854  45667776777789999999999999998653

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.73  E-value=3.9e-17  Score=130.28  Aligned_cols=121  Identities=25%  Similarity=0.295  Sum_probs=89.8

Q ss_pred             cCccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeC---CCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEE
Q 022769          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI---PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH  186 (292)
Q Consensus       110 ~~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~---~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~h  186 (292)
                      +...||+||+|.|+|++++.+||+++|||++......   ........++.++...+.  +.....+      ...+++|
T Consensus         6 ~~~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~a~~~~~------~~~gl~H   77 (156)
T d1kw3b2           6 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHT--IALAAFP------IPKRIHH   77 (156)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCS--EEEECCS------CSSSEEE
T ss_pred             CCCCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccce--eeeccCC------CCCceeE
Confidence            3457999999999999999999999999998765322   122334556665544333  3333221      1238999


Q ss_pred             EEEeeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCC-EEEEEEcC
Q 022769          187 FGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY-KFELLERG  239 (292)
Q Consensus       187 ia~~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~-~iel~e~~  239 (292)
                      ++|+|++   +.+++++|+++|+.+ ..|.++..+...++|++||+|+ .+|+....
T Consensus        78 iaf~v~~~ddv~~~~d~l~~~G~~~-~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~  133 (156)
T d1kw3b2          78 FMLQANTIDDVGYAFDRLDAAGRIT-SLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  133 (156)
T ss_dssp             EEEEBSSHHHHHHHHHHHHHTTCBC-BCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EEEECCCHHHHHHHHHHHHhcCCce-ecCcccCCCCeEEEEEECCCCCeEEEEecCC
Confidence            9999986   556789999999865 5678887777889999999998 59998754

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.72  E-value=3.2e-17  Score=128.52  Aligned_cols=117  Identities=24%  Similarity=0.274  Sum_probs=84.5

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .+++|+||.|.|+|++++.+||+++|||++..+....     ..+........++...+....       ..+..|+++.
T Consensus         4 ~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~   71 (145)
T d1mpya1           4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQG-----RVYLKAWTEVDKFSLVLREAD-------EPGMDFMGFK   71 (145)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTS-----CEEEECTTCCBSCSEEEEECS-------SCEEEEEEEE
T ss_pred             CCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccC-----ccceecccccceeeccccccC-------cccceeeeee
Confidence            4789999999999999999999999999998764321     122233333233333333321       1256676666


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          191 VE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       191 V~---Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      +.   |+++++++|+++|+++...+.....+..+++||+|||||.|||++..
T Consensus        72 ~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~  123 (145)
T d1mpya1          72 VVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADK  123 (145)
T ss_dssp             ESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             ehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEec
Confidence            54   68899999999999987766555555667899999999999999653

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.72  E-value=1.9e-17  Score=124.01  Aligned_cols=109  Identities=20%  Similarity=0.277  Sum_probs=79.8

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      .|+|+||.|.|+|++++++||+++|||++..+.+.   .  ..++. ++..  ..+.+......    ...+..|++|.|
T Consensus         1 ~m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~---~--~~~~~-~~~~--~~~~~~~~~~~----~~~~~~h~~f~v   68 (113)
T d1xqaa_           1 AMGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN---A--FAVMR-DNDG--FILTLMKGKEV----QYPKTFHVGFPQ   68 (113)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT---T--EEEEE-CTTC--CEEEEEECSSC----CCCTTCCEEEEC
T ss_pred             CCcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC---c--ceeee-ecce--eeeeeeeeecc----cccccceeeeee
Confidence            37999999999999999999999999999876431   1  23333 3332  34444443222    123678999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEE
Q 022769          192 ED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (292)
Q Consensus       192 ~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~  236 (292)
                      +|   ++++.++++++|+++..++.    +..+++|++||||++|||.
T Consensus        69 ~~~~~v~~~~~~l~~~G~~~~~~~~----~~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          69 ESEEQVDKINQRLKEDGFLVEPPKH----AHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCEE----C-CEEEEEEETTTEEEEEE
T ss_pred             ccccchhhhhhhHHHcCCccccCCC----CceEEEEEECCCCCEEEEE
Confidence            87   67789999999998754322    3346789999999999996

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.5e-16  Score=127.42  Aligned_cols=127  Identities=32%  Similarity=0.534  Sum_probs=92.7

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCC-----------------ceEEEEEEecC-
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED-----------------SHFVVELTYNY-  173 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~-----------------~~~~l~l~~~~-  173 (292)
                      ..+++|++|.|+|+++|++||+++|||++......+......++...+...                 ....+...... 
T Consensus        21 ~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (176)
T d1qipa_          21 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTE  100 (176)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGG
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeeccc
Confidence            457999999999999999999999999998877766666666666543321                 11112222111 


Q ss_pred             --CCC----CCcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC
Q 022769          174 --GVD----KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       174 --~~~----~~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                        ...    ......|+.|+++.++|+++++++|+++|+++..+|.....  ...+|++||||+.|||+|+..
T Consensus       101 ~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~--~~~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_         101 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             GCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSS--TTCEEEECTTCCEEEEECTTT
T ss_pred             cccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCc--eEEEEEECCCCCEEEEEeCCC
Confidence              011    11123489999999999999999999999999887765433  234789999999999998754

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.71  E-value=2e-16  Score=121.58  Aligned_cols=122  Identities=55%  Similarity=0.916  Sum_probs=88.7

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~  192 (292)
                      +||.||+|.|+|++++++||+++|||++..........................................+..++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            58999999999999999999999999998876554444444444443333332332223223333334457788999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          193 DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       193 Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      +++++++++...++++..+     .+..+++||+|||||+|||++..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          82 DVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             CHHHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             hHHHHHHHHHHcCCceeeC-----CCCcEEEEEECCCCCEEEEEECC
Confidence            9999999999999887543     23446689999999999999864

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.71  E-value=7.3e-17  Score=124.02  Aligned_cols=118  Identities=16%  Similarity=0.249  Sum_probs=84.1

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCC-CceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      +.+|+|++|.|+|++++++||+++|||++..+..... ......++..+.    ..+.+......    ...+..|++|.
T Consensus         2 i~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~f~   73 (130)
T d1r9ca_           2 IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD----IWVAIMQGEKL----AERSYNHIAFK   73 (130)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETT----EEEEEEECCCC----SSCCSCEEEEE
T ss_pred             CCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCC----EEEeecccccc----cccceeeeeec
Confidence            5689999999999999999999999999988754332 222344454432    34444443221    22367789997


Q ss_pred             eC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          191 VE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       191 V~--Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      ++  |+++++++|+++|+++..++... .+..+.+||+|||||+|||.+.
T Consensus        74 v~~~dv~~~~~~l~~~gv~i~~~~~~~-~~~~~~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          74 IDDADFDRYAERVGKLGLDMRPPRPRV-EGEGRSIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             CCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             ccHHHHHHHHHHHHHCCCeEecCCccc-CCCEEEEEEECCCCCEEEEEEC
Confidence            75  79999999999999986654433 3455678999999999999864

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.71  E-value=7.5e-17  Score=125.69  Aligned_cols=114  Identities=22%  Similarity=0.358  Sum_probs=83.4

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      +++|+||+|.|+|++++++||+++|||++..+...      ..++..++.  +..+.+........ ....+.+|++|.+
T Consensus         2 i~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~------~~~~~~~~~--~~~l~~~~~~~~~~-~~~~~~~h~~~~~   72 (140)
T d1npba_           2 LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCGDL--WVCLSYDEARQYVP-PQESDYTHYAFTV   72 (140)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT------EEEEEETTE--EEEEEECTTCCCCC-GGGSCSCEEEEEC
T ss_pred             CCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc------ccccccccc--cceeecccccccCC-CcCCccceeeeec
Confidence            67999999999999999999999999999876431      244444432  33444433222222 2233678888887


Q ss_pred             --CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          192 --EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       192 --~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                        +|+++++++|+++|+++...+    ....+++|++|||||.|||.+.
T Consensus        73 ~~~d~~~~~~~l~~~Gv~~~~~~----~~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          73 AEEDFEPLSQRLEQAGVTIWKQN----KSEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEECC----CSSSEEEEEECTTCCEEEEEEC
T ss_pred             hHHHHHHHHHHHHHCCCeEeecC----CCCceEEEEECCCCCEEEEEEC
Confidence              579999999999999986543    2345678999999999999864

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=6.1e-17  Score=127.78  Aligned_cols=130  Identities=18%  Similarity=0.243  Sum_probs=93.3

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCC-------CcCCCce
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-------YDIGTGF  184 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-------~~~g~g~  184 (292)
                      .++|+||+|.|+|+++|++||+++|||++......+.+.....++......  ..+++........       ...+.|+
T Consensus         9 ~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~g~G~   86 (149)
T d1sqia1           9 FLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGK--IVFVLCSALNPWNKEMGDHLVKHGDGV   86 (149)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETT--EEEEEEEESSTTCHHHHHHHHHHCSEE
T ss_pred             eeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCc--EEEEEEeccCCCCchhhhhhhhCCCeE
Confidence            568999999999999999999999999998776543332223333332222  2333333221111       1136799


Q ss_pred             EEEEEeeCCHHHHHHHHHHcCCeeecCCeecCC--CCeEEEEEECCCCCEEEEEEcCCCCC
Q 022769          185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGPTPE  243 (292)
Q Consensus       185 ~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~--g~~~~~y~~DPdG~~iel~e~~~~~~  243 (292)
                      +||||.|+|+++++++|+++|+++..+|....+  |...+++++.|+|..++|+|+....+
T Consensus        87 ~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~g  147 (149)
T d1sqia1          87 KDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTG  147 (149)
T ss_dssp             EEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCS
T ss_pred             EEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCcC
Confidence            999999999999999999999998887766544  33456788899899999999865433

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.69  E-value=1e-16  Score=128.53  Aligned_cols=126  Identities=22%  Similarity=0.308  Sum_probs=93.5

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCC--ceEEEEEeeCCCCceEEEEEEecCCCCC----------C
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGVDK----------Y  178 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~l~l~~~~~~~~----------~  178 (292)
                      .+++|+||+|.|.|+++|++||+++|||++......+..  ....+.+..+  .  ..+++........          .
T Consensus         4 ~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~--~--~~i~l~~~~~~~~~~~~~~~~~~~   79 (163)
T d1t47a1           4 PVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG--S--ARFVLTSVIKPATPWGHFLADHVA   79 (163)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET--T--EEEEEEEESSCCSHHHHHHHHHHH
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC--C--EEEEEeccCCCCCccccccchhhh
Confidence            378999999999999999999999999999876543332  2233444332  2  3455544322111          1


Q ss_pred             cCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCC--CCeEEEEEECCCCCEEEEEEcCC
Q 022769          179 DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       179 ~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~--g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                      ..+.|+.||+|.|+|+++++++|+++|+++..+|....+  |....+++++|+|..++|+++..
T Consensus        80 ~~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~  143 (163)
T d1t47a1          80 EHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  143 (163)
T ss_dssp             HHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             cCCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccC
Confidence            135699999999999999999999999998887766543  44567899999999999998753

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.69  E-value=3e-16  Score=121.26  Aligned_cols=111  Identities=23%  Similarity=0.361  Sum_probs=78.7

Q ss_pred             ccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       112 i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      +.+|+||+|.|+|++++++||+++||+++..+.+.      ..++..+..    .+........  .....+..|++|.+
T Consensus         2 i~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~------~~~~~~~~~----~~~~~~~~~~--~~~~~~~~h~~~~~   69 (134)
T d1nkia_           2 LTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ------GAYLELGSL----WLCLSREPQY--GGPAADYTHYAFGI   69 (134)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEEETTE----EEEEEECTTC--CCCCSSSCEEEEEE
T ss_pred             CCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc------eeeeecCCe----EEEEeeeccc--cccccccccchhcc
Confidence            57899999999999999999999999999876531      344444431    2222222111  11223555666655


Q ss_pred             --CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          192 --EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       192 --~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                        +|+++++++|+++|+++...    +.+..+.+||+|||||+|||.+.
T Consensus        70 ~~~dl~~~~~~l~~~G~~~~~~----~~~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          70 AAADFARFAAQLRAHGVREWKQ----NRSEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEC----CCSSSCEEEEECTTCCEEEEESC
T ss_pred             ccchHHHHHHHHHHCCCcCccC----CCcceeEEEEECCCCCEEEEEEC
Confidence              68999999999999987543    22345678999999999999853

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.67  E-value=1.3e-16  Score=123.98  Aligned_cols=123  Identities=21%  Similarity=0.293  Sum_probs=86.7

Q ss_pred             ccceEEEEEEc----CCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEE
Q 022769          112 KRRMLHVVYRV----GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  187 (292)
Q Consensus       112 i~~i~Hv~L~V----~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hi  187 (292)
                      +.+|.|+.|+|    +|++++++||+++|||++..+..... .+..+++..+..  .+.+.+....+......+.+.+|+
T Consensus         3 ~~~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~hl   79 (137)
T d1twua_           3 FSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSLL   79 (137)
T ss_dssp             CSSCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCEE
T ss_pred             cCCCceEEEEEecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCCC--ceeeecccccccccccccccCceE
Confidence            34556665555    79999999999999999987654332 445566665443  344555554443333344477899


Q ss_pred             EEeeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC
Q 022769          188 GIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (292)
Q Consensus       188 a~~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~  239 (292)
                      +|.|+|   +++++++|+++|+++..++....  ....+||+||||++|||....
T Consensus        80 af~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~--~~~~~~f~DPDG~~Iel~~~~  132 (137)
T d1twua_          80 VFYVPNAVELAAITSKLKHMGYQEVESENPYW--SNGGVTIEDPDGWRIVFMNSK  132 (137)
T ss_dssp             EEECCCHHHHHHHHHHHHHTTCCEECCSSHHH--HSSEEEEECTTCCEEEEESSC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCeEeCCCCCCC--CceEEEEECCCCCEEEEEcCC
Confidence            999876   77889999999999876544322  334589999999999999654

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.65  E-value=4.7e-16  Score=119.19  Aligned_cols=120  Identities=18%  Similarity=0.176  Sum_probs=82.2

Q ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEe---c-CCCCCCcCCCceEEEEE
Q 022769          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY---N-YGVDKYDIGTGFGHFGI  189 (292)
Q Consensus       114 ~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~---~-~~~~~~~~g~g~~hia~  189 (292)
                      ||+|++|.|+|++++++||++ |||.+........    .+.+..+. ...+.+....   . ........+.+..|++|
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   75 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP----HTEAVLDG-GIRLAWDTVETVRSYDPEWQAPTGGHRFAIAF   75 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS----EEEEECGG-GCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc----ceeeeccc-eeeeeecccccccccCCCCCCCccccceeEee
Confidence            799999999999999999977 8998765433221    23333222 1222222111   0 11111122235678999


Q ss_pred             eeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC
Q 022769          190 AVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (292)
Q Consensus       190 ~V~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~  240 (292)
                      .|.|   +++++++|+++|+++..+|...++ +.+.+|++|||||+|||+++-|
T Consensus        76 ~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~-G~~~~~~~DPdG~~iel~~p~p  128 (128)
T d1klla_          76 EFPDTASVDKKYAELVDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAPLP  128 (128)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEECC
T ss_pred             eeccchhhHHHHHHHHhccCccccCCeEcCC-CcEEEEEECCCCCEEEEEecCC
Confidence            9987   677899999999999888877765 4577899999999999997643

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.64  E-value=9e-16  Score=123.28  Aligned_cols=130  Identities=18%  Similarity=0.260  Sum_probs=93.4

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCC-------------CC
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-------------DK  177 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~-------------~~  177 (292)
                      .+.+++||+|.|+|++++++||+++|||++..+...+.+.........+.....+.+........             +.
T Consensus         9 ~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~   88 (167)
T d1sqda1           9 KVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPS   88 (167)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSSTT
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEecccccccccccccccccccccc
Confidence            36799999999999999999999999999988765433322233332222332233322211000             00


Q ss_pred             ----------CcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC
Q 022769          178 ----------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       178 ----------~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                                ...+.|+.||||.|+|+++++++|+++|+++..+|....+ ..+.++++.+++..++|+++...
T Consensus        89 ~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~-~~~~a~I~~~gd~~~~~v~r~~~  161 (167)
T d1sqda1          89 FDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAE  161 (167)
T ss_dssp             CCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC
T ss_pred             CCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCC-CEEEEEEEccCCcEEEEEecCCC
Confidence                      0024699999999999999999999999999888887755 56778899999999999998643

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.64  E-value=3.2e-16  Score=116.62  Aligned_cols=110  Identities=21%  Similarity=0.285  Sum_probs=78.8

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeC
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~  192 (292)
                      ++| +..|.|+|++++++||+++|||++....+    .+ ..+.. +.. ....+..... .    ..+.+..|++|.++
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~-~~~~~-~~~-~~~~~~~~~~-~----~~~~~~~~~~~~~~   68 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHG----WI-VTHAS-PLE-AHAQVSFARE-G----GSGTDVPDLSIEVD   68 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS----SE-EEEEE-EEE-EEEEEEEESS-S----BTTBCCCSEEEEES
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeeccc----ce-eEecc-ccc-cceeeecccc-c----CCCCceeEEEEEec
Confidence            355 57899999999999999999999876633    11 22222 111 1112222211 1    12234568999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEE
Q 022769          193 DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (292)
Q Consensus       193 Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~  236 (292)
                      |+++++++++++|+++..+|...++| .+.+|++|||||+||++
T Consensus        69 dvd~~~~~l~~~g~~~~~~p~~~~~g-~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          69 NFDEVHARILKAGLPIEYGPVTEAWG-VQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEECTTS-CEEEEEECTTSCEEEEE
T ss_pred             CHHHHHHHHHhhccccccCCeEcCCC-cEEEEEECCCCCEEEeC
Confidence            99999999999999998888877764 46789999999999985

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.63  E-value=1.8e-15  Score=122.28  Aligned_cols=130  Identities=17%  Similarity=0.159  Sum_probs=93.4

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCC-------------
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-------------  177 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-------------  177 (292)
                      .+++++||+|.|+|++++++||+++|||++..+.....+.........+.....+.+..........             
T Consensus        10 ~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (172)
T d1sp8a1          10 HTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAAA   89 (172)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHHH
T ss_pred             CcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcchh
Confidence            3679999999999999999999999999998876543332222222222222222222222111100             


Q ss_pred             ----CcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC
Q 022769          178 ----YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       178 ----~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                          ...+.|+.||||.|+|+++++++|+++|+++..+|....+ +.+.++++.|.+..++|+++...
T Consensus        90 ~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~-g~~~a~v~~~g~~~~~lve~~~~  156 (172)
T d1sp8a1          90 RRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDG  156 (172)
T ss_dssp             HHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTT
T ss_pred             hhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCC-CEEEEEEECCCCcEEEEEecCCC
Confidence                0135699999999999999999999999999888877765 46778899998899999998753

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.46  E-value=5.8e-13  Score=100.32  Aligned_cols=106  Identities=12%  Similarity=0.017  Sum_probs=73.9

Q ss_pred             EEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHHHH
Q 022769          119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV  198 (292)
Q Consensus       119 ~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~~~  198 (292)
                      .|.|+|++++++||+++|||++..+..    .  .+++..+.    ..+.+.......    .....++.+.+.|+++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~----~--~~~~~~~~----~~l~l~~~~~~~----~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR----D--FAGVRRGD----IRLHISRTEHQI----VADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS----S--EEEEEETT----EEEEEEECSCHH----HHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC----c--eeEeeeee----eeeeeecccccc----ccceeEEEEeechhHHHH
Confidence            499999999999999999999877632    1  35555443    234444322211    113457999999999999


Q ss_pred             HHHHHcCCeeecCCee------cCCCCeEEEEEECCCCCEEEEEEc
Q 022769          199 DLVKAKGGKVTREPGP------VKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       199 ~~L~~~G~~i~~~p~~------~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      +++++++......+..      ...++.+.+|++|||||+|||.+.
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            9999998765333211      112346789999999999999863

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.45  E-value=1.1e-12  Score=98.76  Aligned_cols=104  Identities=24%  Similarity=0.361  Sum_probs=72.4

Q ss_pred             EEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHHHHH
Q 022769          120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVD  199 (292)
Q Consensus       120 L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~~~~  199 (292)
                      |.|+|+++|++||++ |||++.....    .  .+++..+.    ..+.+.......+.   ....++.+.++|++++++
T Consensus         8 l~v~Dl~~s~~FY~~-LGf~~~~~~~----~--~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~   73 (120)
T d1ecsa_           8 LPSRDFDSTAAFYER-LGFGIVFRDA----G--WMILQRGD----LMLEFFAHPGLDPL---ASWFSCCLRLDDLAEFYR   73 (120)
T ss_dssp             EEESCHHHHHHHHHT-TTCEEEEECS----S--EEEEEETT----EEEEEEECTTCCGG---GCCCEEEEEESCHHHHHH
T ss_pred             EEeCCHHHHHHHHHH-cCCeeEEecC----c--eeeeecce----eccccccccccccC---CCCcEEEEEECCHHHHHH
Confidence            999999999999998 9999987533    1  23333332    12333332222111   133478999999999999


Q ss_pred             HHHHcCCeeecC-------CeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          200 LVKAKGGKVTRE-------PGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       200 ~L~~~G~~i~~~-------p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      .++++|+.+...       +...++| .+.+||+|||||+|||.|.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~G-~r~~~~~DPDGn~iei~q~  118 (120)
T d1ecsa_          74 QCKSVGIQETSSGYPRIHAPELQGWG-GTMAALVDPDGTLLRLIQN  118 (120)
T ss_dssp             HHHHTTCCBCSSSSSEEEEEEECTTS-SEEEEEECTTSCEEEEEEC
T ss_pred             HHhhhhhhhccccccccccceecCCC-cEEEEEECCCCCEEEEEEc
Confidence            999998876432       3444443 4678999999999999985

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.37  E-value=9.6e-13  Score=101.32  Aligned_cols=116  Identities=12%  Similarity=0.096  Sum_probs=76.1

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCC-------CceEEEEEeeCCCCceEEEEEEecC---CCCCCcCCCceEE
Q 022769          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-------DRYTNAFLGYGPEDSHFVVELTYNY---GVDKYDIGTGFGH  186 (292)
Q Consensus       117 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-------~~~~~~~l~~g~~~~~~~l~l~~~~---~~~~~~~g~g~~h  186 (292)
                      ++.+.|.|+++|++||+++||+++..+...++       +....+.+..++.    .+.+....   ............+
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~   85 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGS----SFVVCDVSSLPGFSTAKSEGSGVT   85 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTE----EEEEEEGGGSTTCCCCCTTSCCCE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCe----eeeccccccccccccCCCCCcceE
Confidence            35567789999999999999999876533221       1222344444331    22222211   1111111112348


Q ss_pred             EEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       187 ia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      +++.++|++++++++.++|+++..++...++|. +.++++||+|+.|+|.|
T Consensus        86 l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~-~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          86 FLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELG-FKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EEEECSCHHHHHHHHHHTTCEECCCCHHHHHTT-EEEEEECTTSCEEEEEC
T ss_pred             EEEeecCcceeEEEeecccceEecCcccccccC-EEEEEECCCCCEEEEeC
Confidence            999999999999999999999999888887754 55899999999999975

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.36  E-value=7.5e-12  Score=93.49  Aligned_cols=105  Identities=12%  Similarity=0.017  Sum_probs=71.4

Q ss_pred             EEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEeeCCHHHH
Q 022769          118 VVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKT  197 (292)
Q Consensus       118 v~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V~Dl~~~  197 (292)
                      ..|.|+|++++++||+++|||++..+..    .  ..++..+.    ..+.+.......    ..+..++.+.+.+++.+
T Consensus         8 pvL~v~D~~~s~~FY~~~LG~~~~~~~~----~--~~~~~~~~----~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~   73 (120)
T d1xrka_           8 PVLTARDVAEAVEFWTDRLGFSRVFVED----D--FAGVVRDD----VTLFISAVQDQV----VPDNTQAWVWVRGLDEL   73 (120)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEECS----S--EEEEEETT----EEEEEEECSCTT----TGGGCEEEEEEECHHHH
T ss_pred             EEEEECCHHHHHHHHHHhhCCeEEEECC----C--eeEEeccc----ceeecccccccc----CCCCceEEEeeccHHHH
Confidence            4599999999999999999999987643    1  24444443    233343332221    12445788999999988


Q ss_pred             HHHHHHcCCe--------eecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          198 VDLVKAKGGK--------VTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       198 ~~~L~~~G~~--------i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      .+.+.+.+..        ...++...+  .++.+|++|||||+|||+.+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~DPdGn~ief~~e  120 (120)
T d1xrka_          74 YAEWSEVVSTNFRDASGPAMTEIVEQP--WGREFALRDPAGNCVHFVAE  120 (120)
T ss_dssp             HHHHTTTSBSCTTTCSSCEECCCEEET--TEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHhhhHHhhhcccccccCceecC--CEEEEEEECCCCCEEEEEEC
Confidence            8877765543        333444443  34689999999999999863

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.33  E-value=3.2e-12  Score=100.50  Aligned_cols=120  Identities=10%  Similarity=0.046  Sum_probs=86.4

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEEEEeeCCCCceEEEEEEecCCCC--C--CcCCCceEE
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD--K--YDIGTGFGH  186 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~--~--~~~g~g~~h  186 (292)
                      .+.+|+||++.|.|++++.+||++ |||+...+.....    ...+..+.    +.+.+.......  +  ...|.|++|
T Consensus         6 g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~~----~~l~~~G~----i~ll~~~~~~s~~~~~~~~hg~gv~h   76 (150)
T d1cjxa1           6 GLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSKN----VHLYRQGE----INLILNNEPNSIASYFAAEHGPSVCG   76 (150)
T ss_dssp             CEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSSS----EEEEEETT----EEEEEECCSSSHHHHHHHHHSSEEEE
T ss_pred             ccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccceE----EEEEecCc----EEEEecCCCCCHhHhHHhhCCCceEE
Confidence            367999999999999999999986 9999987643221    23333332    334333321111  0  115779999


Q ss_pred             EEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC
Q 022769          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (292)
Q Consensus       187 ia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~  241 (292)
                      +||+|+|+++++++++++|++...++..  .+......+++|+|.++.|+++...
T Consensus        77 iaf~V~D~~~a~~~a~~~Ga~~i~~~~~--~g~~~~~~i~g~gg~~i~Fv~~~~~  129 (150)
T d1cjxa1          77 MAFRVKDSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGE  129 (150)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSS
T ss_pred             EEEEeCCHHHHHHHHHHCCCEEcccCCC--CCceeeeEEEcCCCCEEEEECcCCC
Confidence            9999999999999999999987655433  2334456789999999999987554

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.20  E-value=4.9e-11  Score=98.22  Aligned_cols=99  Identities=19%  Similarity=0.198  Sum_probs=68.6

Q ss_pred             ccceEEEEEEcC--CHHHHHHHHHHhcCCEEEEEeeCCCCc--eEEEEEeeCCCCceEEEEEEecCCCC-C-------Cc
Q 022769          112 KRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPEDR--YTNAFLGYGPEDSHFVVELTYNYGVD-K-------YD  179 (292)
Q Consensus       112 i~~i~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~~--~~~~~l~~g~~~~~~~l~l~~~~~~~-~-------~~  179 (292)
                      .++|+||++.|+  |+++++.||+++|||+.....+.++..  .....+......  ..+.+....... .       ..
T Consensus         3 l~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~--~~~~l~~~~~~~~sqi~~fl~~~   80 (203)
T d1cjxa2           3 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGM--IRIPLNEESSKGAGQIEEFLMQF   80 (203)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSS--CEEEEEEECTTCCSHHHHHHHHH
T ss_pred             CCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccc--cceecccCCCCCccHHHHHHHhc
Confidence            468999999998  899999999999999998775543322  222222222222  233332221111 1       11


Q ss_pred             CCCceEEEEEeeCCHHHHHHHHHHcCCeeecCC
Q 022769          180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP  212 (292)
Q Consensus       180 ~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p  212 (292)
                      .|.|++||||.|+|+.++.++|+++|++....|
T Consensus        81 ~g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          81 NGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             TSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCCCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            467999999999999999999999999987654

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.14  E-value=3.6e-10  Score=92.38  Aligned_cols=99  Identities=16%  Similarity=0.245  Sum_probs=68.3

Q ss_pred             ccceEEEEEEcC--CHHHHHHHHHHhcCCEEEEEeeC-----CCCceEEEEEeeCCCCceEEEEEEecCCCC--C-----
Q 022769          112 KRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDI-----PEDRYTNAFLGYGPEDSHFVVELTYNYGVD--K-----  177 (292)
Q Consensus       112 i~~i~Hv~L~V~--Dle~a~~FY~~vLG~~~~~~~~~-----~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~--~-----  177 (292)
                      -++|+||++.|+  ++++++.||+++|||+.......     +.......-+.....  .+.+.+.......  .     
T Consensus         4 f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~--~v~l~lne~~~~~~~s~i~~F   81 (199)
T d1t47a2           4 FQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTL--KVKFPINEPALAKKKSQIDEY   81 (199)
T ss_dssp             CCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTS--CSEEEEEEECCSSSCCHHHHH
T ss_pred             ceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeecccccc--ccceeecccCccccccchhhh
Confidence            468999999998  99999999999999998654321     222333333332322  2334333221111  1     


Q ss_pred             --CcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCC
Q 022769          178 --YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP  212 (292)
Q Consensus       178 --~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p  212 (292)
                        ...|.|++||||.|+|+.++.++|+++|++....|
T Consensus        82 L~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          82 LEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             HHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             hhhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence              12457999999999999999999999999987665

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.08  E-value=5.1e-10  Score=93.24  Aligned_cols=95  Identities=19%  Similarity=0.284  Sum_probs=64.2

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCC-----CCceEEEEEeeCCCCceEEEEEEecC---CCCCC----
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP-----EDRYTNAFLGYGPEDSHFVVELTYNY---GVDKY----  178 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~-----~~~~~~~~l~~g~~~~~~~l~l~~~~---~~~~~----  178 (292)
                      .+++|+||++.|+|++++++||+++|||+...+....     ........+..+..  .+.+.+....   .....    
T Consensus         6 Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g--~v~~~l~E~~~~~~~~s~i~~F   83 (224)
T d1sp8a2           6 GLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSE--NVLLPLNEPVHGTKRRSQIQTF   83 (224)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSS--CCEEEEEEECCCSSSCCHHHHH
T ss_pred             CcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCC--ccceeeeeecCCCCCccHHHHH
Confidence            4679999999999999999999999999987764322     12223333333332  2334443321   11111    


Q ss_pred             ---cCCCceEEEEEeeCCHHHHHHHHHHcCCe
Q 022769          179 ---DIGTGFGHFGIAVEDVAKTVDLVKAKGGK  207 (292)
Q Consensus       179 ---~~g~g~~hia~~V~Dl~~~~~~L~~~G~~  207 (292)
                         ..+.|++||||.|+|+.++.+.|+++|+.
T Consensus        84 L~~~~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          84 LDHHGGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             HHhccCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence               13579999999999999999999988643

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=5.5e-10  Score=92.00  Aligned_cols=101  Identities=16%  Similarity=0.252  Sum_probs=68.1

Q ss_pred             CccceEEEEEEcCC--HHHHHHHHHHhcCCEEEEEeeCC-----CCceEEEEEeeCCCCceEEEEEEecCC--CCC----
Q 022769          111 DKRRMLHVVYRVGD--LDKTIKFYTECLGMKLLRKRDIP-----EDRYTNAFLGYGPEDSHFVVELTYNYG--VDK----  177 (292)
Q Consensus       111 ~i~~i~Hv~L~V~D--le~a~~FY~~vLG~~~~~~~~~~-----~~~~~~~~l~~g~~~~~~~l~l~~~~~--~~~----  177 (292)
                      ..++|+||++.|++  ++++.+||+++|||+.....+..     ........+......  +.+.+.....  ...    
T Consensus        21 gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~--i~~~lne~~~~~~~sqi~~   98 (210)
T d1sqia2          21 NLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEES--IKMPINEPAPGRKKSQIQE   98 (210)
T ss_dssp             CEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSC--CEEEEEECC-----CHHHH
T ss_pred             CcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCcc--ccccccccCCCCcccHHHH
Confidence            35689999999998  99999999999999876543211     112222333333332  3444433221  111    


Q ss_pred             ---CcCCCceEEEEEeeCCHHHHHHHHHHcCCeeecCCe
Q 022769          178 ---YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPG  213 (292)
Q Consensus       178 ---~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~  213 (292)
                         ...|.|++||||.|+|+.++.++|+++|++....|.
T Consensus        99 fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~  137 (210)
T d1sqia2          99 YVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPS  137 (210)
T ss_dssp             HHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCH
T ss_pred             HHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCc
Confidence               125779999999999999999999999999876653

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.88  E-value=1.1e-07  Score=72.41  Aligned_cols=110  Identities=19%  Similarity=0.161  Sum_probs=71.1

Q ss_pred             CCHHHHHHHHHHhcCCEEEEEeeCCC------------CceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          123 GDLDKTIKFYTECLGMKLLRKRDIPE------------DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       123 ~Dle~a~~FY~~vLG~~~~~~~~~~~------------~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .|.++|++||+++||+++.......+            +....+.+..++.    .+.............+ +-.++++.
T Consensus        12 g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~----~~~~~d~~~~~~~~~~-~~~~~~l~   86 (137)
T d1u6la_          12 GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSF----ALMASDNHPAYPYEGI-KGCSISLN   86 (137)
T ss_dssp             SCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTE----EEEEEECCTTSCCCCC-CSEEEEEE
T ss_pred             CCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCe----EEEecccCCcccccCC-CcEEEEEE
Confidence            49999999999999999976543222            1222333443321    2222222222122222 33467888


Q ss_pred             eCCHH--HHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEc
Q 022769          191 VEDVA--KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (292)
Q Consensus       191 V~Dl~--~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~  238 (292)
                      +++.+  +.+.++.++|+++..++...++| .+..+++||+|+.|+|-..
T Consensus        87 ~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG-~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          87 VDSKAEAERLFNALAEGGSVQMPLGPTFWA-ASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             CSSHHHHHHHHHHHHTTSEEEEEEEEETTE-EEEEEEECTTSCEEEEEES
T ss_pred             cCCHHHHHHHHhhcccCceeecCccccCCC-cEEEEEECCCCCEEEEEec
Confidence            77644  45667778999999998888875 4678999999999999754

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.84  E-value=1.4e-08  Score=84.58  Aligned_cols=95  Identities=16%  Similarity=0.266  Sum_probs=63.8

Q ss_pred             CccceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCC-----CceEEEEEeeCCCCceEEEEEEecCCC---CC-----
Q 022769          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----DRYTNAFLGYGPEDSHFVVELTYNYGV---DK-----  177 (292)
Q Consensus       111 ~i~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~l~l~~~~~~---~~-----  177 (292)
                      .+++|+||++.|+|++++.+||+++||+.........+     .......+....  ..+.+.+......   ..     
T Consensus        19 gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~--g~v~~~l~E~~~~~~~~sqi~~F   96 (230)
T d1sqda2          19 GIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASND--EMVLLPINEPVHGTKRKSQIQTY   96 (230)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTT--SCSEEEEEEECCC---CCHHHHH
T ss_pred             CcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCC--cccceeEEeecCCCCCcchHHHH
Confidence            46799999999999999999999999999877654222     112222222222  2234444432111   11     


Q ss_pred             --CcCCCceEEEEEeeCCHHHHHHHHHHcCCe
Q 022769          178 --YDIGTGFGHFGIAVEDVAKTVDLVKAKGGK  207 (292)
Q Consensus       178 --~~~g~g~~hia~~V~Dl~~~~~~L~~~G~~  207 (292)
                        ...|.|++||||.|+|+.++.++|+++|..
T Consensus        97 L~~~~G~GiQHIAf~tdDI~aav~~LrarG~~  128 (230)
T d1sqda2          97 LEHNEGAGLQHLALMSEDIFRTLREMRKRSSI  128 (230)
T ss_dssp             HHHHTSCEEEEEEEEESCHHHHHHHHHHHGGG
T ss_pred             HhhccCCceeEEEEEeCCHHHHHHHHHHhhcc
Confidence              125779999999999999999999997543

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.59  E-value=2.4e-06  Score=64.75  Aligned_cols=114  Identities=17%  Similarity=0.205  Sum_probs=70.5

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEEEEee-------CCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEE
Q 022769          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRD-------IPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (292)
Q Consensus       117 Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~-------~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~  189 (292)
                      ++.+.-.+.++|++||+++||.+...+..       .+.+....+.+..++.    .+.+...........+.+ ..+.+
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~----~i~~~d~~~~~~~~~~~~-~s~~l   83 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQ----SVHCIDSHVRHAFDFTPA-FSFFV   83 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTE----EEEEEEESSCCSCCCCTT-EEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCE----EEEEecCCCCCCCCCCCc-eEEEE
Confidence            34455568999999999999987544321       1234555666666532    222333222222223333 35777


Q ss_pred             eeCCHHHH--HHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEE
Q 022769          190 AVEDVAKT--VDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (292)
Q Consensus       190 ~V~Dl~~~--~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~  236 (292)
                      .+++.+..  +.+..++|.++..++...+++. +...++||.|+.|.|-
T Consensus        84 ~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~-~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          84 DCESNAQIERLAEALSDGGKALMPLGDYGFSQ-RFAWLADRFGVSWQLN  131 (134)
T ss_dssp             ECCCHHHHHHHHHHHHTTSEEEEEEECCSSSS-EEEEEECTTSCEEEEE
T ss_pred             EeccHHHHHHHHHHHhcCCEEecCcccccccc-eEEEEECCCCCEEEEE
Confidence            77764332  4444566888888888777654 5578999999999985

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=98.10  E-value=1.5e-06  Score=64.77  Aligned_cols=45  Identities=44%  Similarity=0.765  Sum_probs=37.7

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcC
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLP  287 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~  287 (292)
                      +++.|++|.|+|+++|++||+++|||++..+.+.++..+......
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~   46 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLG   46 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeec
Confidence            579999999999999999999999999998876666555555443

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=2.8e-06  Score=66.90  Aligned_cols=47  Identities=38%  Similarity=0.628  Sum_probs=41.1

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcCCCC
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLPPNK  290 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~  290 (292)
                      +++|++|.|+|+++|++||+++|||++....+.+...+...|+..++
T Consensus        23 ~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~   69 (176)
T d1qipa_          23 LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYED   69 (176)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCC
T ss_pred             EEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCC
Confidence            68999999999999999999999999998777777778777776543

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.99  E-value=0.00016  Score=53.83  Aligned_cols=108  Identities=12%  Similarity=0.143  Sum_probs=65.3

Q ss_pred             EEEcC-CHHHHHHHHHHhcCCE-EEEEee------CCCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEe
Q 022769          119 VYRVG-DLDKTIKFYTECLGMK-LLRKRD------IPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (292)
Q Consensus       119 ~L~V~-Dle~a~~FY~~vLG~~-~~~~~~------~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~  190 (292)
                      .|... |.++|++||+++||-. +.....      ..++....+.+..++.    .+.+....+..  ..  . .++.+.
T Consensus         9 yl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~----~~~~~d~~~~~--~~--~-~s~~v~   79 (129)
T d1tsja_           9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQ----VFMAIDANSGT--EL--P-ISLFVT   79 (129)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTE----EEEEEC-----------C-CCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCE----EEEeecCCCCC--CC--C-EEEEec
Confidence            45665 9999999999999754 333221      1234555666666542    23232222111  11  1 136677


Q ss_pred             eCCHHH---HHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEE
Q 022769          191 VEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (292)
Q Consensus       191 V~Dl~~---~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e  237 (292)
                      +++.++   ++++|. .|+++..++...+++ .+...++||.|+.|.|..
T Consensus        80 ~~~~~e~~~~~~~L~-~gg~v~~p~~~~~~g-~~~g~v~D~fGv~W~i~~  127 (129)
T d1tsja_          80 VKDTIEMERLFNGLK-DEGAILMPKTNMPPY-REFAWVQDKFGVSFQLAL  127 (129)
T ss_dssp             CSSHHHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEE
T ss_pred             cCCHHHHHHHHHHhc-cCCEEeccccccccc-ceEEEEECCCCCEEEEeC
Confidence            777554   555665 566888777777764 456789999999999865

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=97.97  E-value=4.7e-06  Score=61.74  Aligned_cols=43  Identities=51%  Similarity=0.925  Sum_probs=35.7

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEc
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLL  286 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~  286 (292)
                      ++.|++|.|+|+++|.+||+++|||++.+..+.+...+....+
T Consensus         2 kl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~   44 (135)
T d1f9za_           2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFV   44 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEE
T ss_pred             cceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeee
Confidence            6889999999999999999999999999877666555544443

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=97.72  E-value=1.5e-05  Score=61.62  Aligned_cols=47  Identities=26%  Similarity=0.360  Sum_probs=36.9

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEeeecC---CCCcEEEEEcCCC
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDN---PDYKVNSYLLPPN  289 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~---~~~~~~~~~~~~~  289 (292)
                      .+|+|++|.|+|++++.+||+++|||++++....   ......+.|+..+
T Consensus         9 ~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~   58 (156)
T d1kw3b2           9 QGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCN   58 (156)
T ss_dssp             GCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESS
T ss_pred             CCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeec
Confidence            4799999999999999999999999999986532   2334555566554

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=97.60  E-value=0.00024  Score=53.33  Aligned_cols=90  Identities=22%  Similarity=0.328  Sum_probs=65.6

Q ss_pred             ceEEEEEeeCCHHHHHHHHHHcCCeeecCCee----------cCCCCeEEEEEECCCC-CEEEEEEcCCC----------
Q 022769          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGP----------VKGGNTVIAFIEDPDG-YKFELLERGPT----------  241 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~----------~~~g~~~~~y~~DPdG-~~iel~e~~~~----------  241 (292)
                      +++|+++.|+|+++..+..++.|.++......          .+.......++..++| ..+++++....          
T Consensus         9 ri~Hv~i~v~Dle~s~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~   88 (149)
T d1ss4a_           9 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRTAP   88 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCTTCC
T ss_pred             EEeEEEEEeCCHHHHHHHHHHcCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCcccccccC
Confidence            78999999999999999998899886543211          1123345667777776 56777653210          


Q ss_pred             --CCCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          242 --PEPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       242 --~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                        ...+.|+++.|.|+++..+.+++ .|.++...
T Consensus        89 ~~~~g~~hi~~~v~d~~~~~~~l~~-~G~~~~~~  121 (149)
T d1ss4a_          89 VNALGYLRVMFTVEDIDEMVSRLTK-HGAELVGE  121 (149)
T ss_dssp             SSSBEEEEEEEEESCHHHHHHHHHH-TTCEESSC
T ss_pred             CCCcceeEEEEeechhHHHHHHHHH-CCCeEccC
Confidence              12478999999999999999975 89988654

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=97.60  E-value=2.5e-05  Score=58.42  Aligned_cols=31  Identities=16%  Similarity=0.185  Sum_probs=29.0

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      +|+||.|.|+|++++.+||+++|||++.++.
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~   34 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTT   34 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecC
Confidence            5899999999999999999999999999864

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=97.57  E-value=2.9e-05  Score=58.14  Aligned_cols=32  Identities=22%  Similarity=0.200  Sum_probs=29.8

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      .+|+||.+.|+|++++.+||+++|||++.++.
T Consensus         3 ~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~   34 (132)
T d1kw3b1           3 ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSA   34 (132)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHhCCceeccc
Confidence            47999999999999999999999999999864

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=97.54  E-value=4.6e-05  Score=57.44  Aligned_cols=34  Identities=15%  Similarity=0.325  Sum_probs=30.7

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEeeecC
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDN  276 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~  276 (292)
                      .+|+||+|.|+|++++++||+++|||++..+...
T Consensus         5 ~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~   38 (144)
T d1zswa1           5 KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVN   38 (144)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEE
T ss_pred             cceeeEEEEeCCHHHHHHHHHHHhCCeeEeeecc
Confidence            5799999999999999999999999999876543

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=97.50  E-value=5.8e-05  Score=56.49  Aligned_cols=38  Identities=26%  Similarity=0.471  Sum_probs=33.0

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEeeecCCCCc
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK  280 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~~~~  280 (292)
                      .+|+||.+.|+|+++|++||+++|||++.+..+.+...
T Consensus         6 ~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~   43 (145)
T d1jc4a_           6 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQG   43 (145)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTT
T ss_pred             eEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccc
Confidence            47999999999999999999999999998876655433

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=0.00056  Score=51.63  Aligned_cols=89  Identities=15%  Similarity=0.169  Sum_probs=61.6

Q ss_pred             ceEEEEEeeCCHHHHHHHHH-HcCCeeecCCeecCCC-CeEEEEEECCCCCEEEEEEcCCC------------CCCceee
Q 022769          183 GFGHFGIAVEDVAKTVDLVK-AKGGKVTREPGPVKGG-NTVIAFIEDPDGYKFELLERGPT------------PEPLCQV  248 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~-~~G~~i~~~p~~~~~g-~~~~~y~~DPdG~~iel~e~~~~------------~~~l~hv  248 (292)
                      +++||+|.|.|++++.+... ..|.+........... ....+.+.+ ++..+++.+....            +..+.|+
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~g~G~~hi   89 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQ-GKIVFVLCSALNPWNKEMGDHLVKHGDGVKDI   89 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEE-TTEEEEEEEESSTTCHHHHHHHHHHCSEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecC-CcEEEEEEeccCCCCchhhhhhhhCCCeEEEE
Confidence            89999999999999999885 5799875432221111 223333443 4556666654321            2368899


Q ss_pred             eeecCCHHHHHHHHHHhcCCEEEee
Q 022769          249 MLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       249 ~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      ++.|.|++++.+-..+ .|.+....
T Consensus        90 af~V~di~~~~~~l~~-~G~~~~~~  113 (149)
T d1sqia1          90 AFEVEDCEHIVQKARE-RGAKIVRE  113 (149)
T ss_dssp             EEEEECHHHHHHHHHH-HTCCEEEE
T ss_pred             EEEeccHHHHHHHHHH-CCCEEccC
Confidence            9999999999999975 89887653

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=97.34  E-value=7e-05  Score=56.46  Aligned_cols=31  Identities=26%  Similarity=0.428  Sum_probs=29.0

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      +|+||.|.|+|++++.+||+++|||++.++.
T Consensus         7 rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~   37 (145)
T d1mpya1           7 RPGHVQLRVLDMSKALEHYVELLGLIEMDRD   37 (145)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             EeeeEEEEeCCHHHHHHHHHHhhCCEEEEee
Confidence            6899999999999999999999999999863

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=97.30  E-value=0.0012  Score=46.90  Aligned_cols=96  Identities=16%  Similarity=0.260  Sum_probs=66.9

Q ss_pred             ceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC-CCCCceeeeeecCCHHHHHH
Q 022769          183 GFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-TPEPLCQVMLRVGDLDRAIN  260 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~-~~~~l~hv~l~v~D~~~s~~  260 (292)
                      |++|+.+.|+|+++..+...+ .|.++...    ..+.  ..++.++++..+.+..... ......|+.+.+.|.+...+
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~h~~f~v~~~~~v~~   76 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGT----RGNA--FAVMRDNDGFILTLMKGKEVQYPKTFHVGFPQESEEQVDK   76 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEE----ETTT--EEEEECTTCCEEEEEECSSCCCCTTCCEEEECSSHHHHHH
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEe----ecCc--ceeeeecceeeeeeeeeecccccccceeeeeeccccchhh
Confidence            789999999999999988876 79887532    1222  3567788889898887653 34578999999998776666


Q ss_pred             HHHH--hcCCEEEeeecCCCCcEEEEEc
Q 022769          261 FYKK--AFGMELLRKRDNPDYKVNSYLL  286 (292)
Q Consensus       261 fY~~--~lG~~~~~~~~~~~~~~~~~~~  286 (292)
                      ++..  ..|.++.....  ...+.++|.
T Consensus        77 ~~~~l~~~G~~~~~~~~--~~~~~~~~~  102 (113)
T d1xqaa_          77 INQRLKEDGFLVEPPKH--AHAYTFYVE  102 (113)
T ss_dssp             HHHHHHHTTCCCCCCEE--C-CEEEEEE
T ss_pred             hhhhHHHcCCccccCCC--CceEEEEEE
Confidence            6654  37887654322  233555543

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.26  E-value=0.00097  Score=51.32  Aligned_cols=90  Identities=12%  Similarity=0.100  Sum_probs=59.7

Q ss_pred             ceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC---------------C-----
Q 022769          183 GFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------T-----  241 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~---------------~-----  241 (292)
                      +++|++|.|+|++++.+.+.+ .|.+................+.....+..+.+.....               .     
T Consensus        12 ~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (167)
T d1sqda1          12 RFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDH   91 (167)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSSTTCCH
T ss_pred             eEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccccccccccCCc
Confidence            899999999999999998875 8988653311111112222333333444444432210               0     


Q ss_pred             ----------CCCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          242 ----------PEPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       242 ----------~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                                ...+.|+++.|.|++++.+...+ .|.+....
T Consensus        92 ~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~  132 (167)
T d1sqda1          92 GSCRSFFSSHGLGVRAVAIEVEDAESAFSISVA-NGAIPSSP  132 (167)
T ss_dssp             HHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHH-TTCCEEEE
T ss_pred             chHHHhhhccCCCceEEEEEeCCHHHHHHHHHH-CCCEEecC
Confidence                      12689999999999999999975 79987764

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=97.24  E-value=7.2e-05  Score=56.77  Aligned_cols=31  Identities=19%  Similarity=0.383  Sum_probs=29.3

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .+|+||.|.|+|++++.+||+++|||++.+.
T Consensus        15 ~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~   45 (146)
T d1f1ua1          15 VRCAYMEIVVTDLAKSREFYVDVLGLHVTEE   45 (146)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEE
T ss_pred             cEEeEEEEEeCCHHHHHHHHHhccCcEEEee
Confidence            3799999999999999999999999999986

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=97.23  E-value=0.00011  Score=54.10  Aligned_cols=34  Identities=21%  Similarity=0.306  Sum_probs=30.3

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeecCC
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP  277 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~~~  277 (292)
                      +|+|+.|.|+|++++++||+++|||++....+..
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~   37 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTE   37 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGS
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCc
Confidence            5899999999999999999999999998765433

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=97.23  E-value=0.0013  Score=50.35  Aligned_cols=91  Identities=14%  Similarity=0.226  Sum_probs=64.5

Q ss_pred             CceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC---------------CCCc
Q 022769          182 TGFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------PEPL  245 (292)
Q Consensus       182 ~g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~---------------~~~l  245 (292)
                      .+++|++|.|.|++++.+.+++ .|.+................++....+..+++.+....               ...+
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~g~G~   85 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHGDGV   85 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHCSEE
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhcCCCce
Confidence            3899999999999999999986 79987543111112222333444445677888775432               2368


Q ss_pred             eeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          246 CQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       246 ~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .|+++.|.|++++.+-..+ -|.+....
T Consensus        86 ~hiaf~VdDid~a~~~l~~-~Ga~~~~~  112 (163)
T d1t47a1          86 VDLAIEVPDARAAHAYAIE-HGARSVAE  112 (163)
T ss_dssp             EEEEEECSCHHHHHHHHHH-TTCCEEEE
T ss_pred             EEEEEeeCCHHHHHHHHHH-CCCeEEec
Confidence            9999999999999999965 88877653

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.22  E-value=0.00014  Score=54.05  Aligned_cols=31  Identities=32%  Similarity=0.555  Sum_probs=29.1

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      +|+||+|.|+|++++.+||+++|||++..+.
T Consensus         4 ~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~   34 (134)
T d1nkia_           4 GLNHLTLAVADLPASIAFYRDLLGFRLEARW   34 (134)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhhCCeEEEec
Confidence            5899999999999999999999999998864

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.20  E-value=0.015  Score=44.25  Aligned_cols=130  Identities=14%  Similarity=0.132  Sum_probs=79.9

Q ss_pred             EEcCCHHHHHHHHHHhcCC-EEEEEeeC-------CCCceEEEEEeeCCCCceEEEEEEecCCCCCCcCCCceEEEEEee
Q 022769          120 YRVGDLDKTIKFYTECLGM-KLLRKRDI-------PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (292)
Q Consensus       120 L~V~Dle~a~~FY~~vLG~-~~~~~~~~-------~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hia~~V  191 (292)
                      +.-.+.++|.+||+++||- ++......       ..+....+.+..++.    .+.....  .+....+.++ ++.+.+
T Consensus         8 ~F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~----~lm~sD~--~~~~~~~~~~-sl~l~~   80 (156)
T d1u69a_           8 WYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGI----PCLGLNG--GPAFRHSEAF-SFQVAT   80 (156)
T ss_dssp             EESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTE----EEEEEEC--CTTCCCCTTE-EEEEEE
T ss_pred             eECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCe----EEEeecC--CCCCCCCCCe-EEEEec
Confidence            4447899999999999964 33332211       223455566665431    2222222  2223344454 588888


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCCCCCceeeeeecCCHHHHHHHHHHhcCC
Q 022769          192 ED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGM  268 (292)
Q Consensus       192 ~D---l~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~~~~l~hv~l~v~D~~~s~~fY~~~lG~  268 (292)
                      +|   +++++++|.+.|- +..     +-|     +++|+.|+.|.|+.+.-      .-.+...|.+++.+-++..+.|
T Consensus        81 d~~eE~d~~f~~LsegG~-~~~-----~~G-----~v~DkFGV~Wqi~~~~~------~~~~~~~~~~~~~~~~~a~~~m  143 (156)
T d1u69a_          81 DDQAETDRLWNAIVDNGG-EES-----ACG-----WCRDKWGISWQITPRVL------SEAIASPDRAAARRAFEAMMTM  143 (156)
T ss_dssp             SSHHHHHHHHHHHHHTTC-EEC-----STT-----EEECTTSCEEEEEEHHH------HHHHTCSSHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHhccCC-CCC-----CCe-----EEECCCCCEEEeChHHH------HHHhcCCCHHHHHHHHHHHHcC
Confidence            87   6677888877763 322     122     59999999999995420      0112345788888888888888


Q ss_pred             EEEee
Q 022769          269 ELLRK  273 (292)
Q Consensus       269 ~~~~~  273 (292)
                      +..+.
T Consensus       144 ~k~d~  148 (156)
T d1u69a_         144 GRIDI  148 (156)
T ss_dssp             SSCCH
T ss_pred             cCeeH
Confidence            87664

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=97.16  E-value=0.0011  Score=51.40  Aligned_cols=91  Identities=15%  Similarity=0.138  Sum_probs=60.6

Q ss_pred             ceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCC---------------------
Q 022769          183 GFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------------  240 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~---------------------  240 (292)
                      +++|++|.|.|++++.+.+.+ .|+++...............+.....+..+.+.....                     
T Consensus        13 ~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (172)
T d1sp8a1          13 AFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAAARRF   92 (172)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHHHHHH
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcchhhhh
Confidence            899999999999999998875 8988754322211222222333333344444432211                     


Q ss_pred             ---CCCCceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          241 ---TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       241 ---~~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                         ....+.|+++.|.|++++.+-..+ .|.++...-
T Consensus        93 ~~~~g~Gi~Hiaf~VdDi~aa~~~l~~-~Ga~~~~~P  128 (172)
T d1sp8a1          93 AADHGLAVRAVALRVADAEDAFRASVA-AGARPAFGP  128 (172)
T ss_dssp             HHHHSSEEEEEEEEESCHHHHHHHHHT-TTCCEEEEE
T ss_pred             hhhcCCceEEEEEeeCcHHHHHHHHHH-CcCEeccCC
Confidence               023689999999999999999974 999987653

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=97.16  E-value=0.00015  Score=56.67  Aligned_cols=32  Identities=22%  Similarity=0.341  Sum_probs=29.8

Q ss_pred             CCceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       243 ~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      .+|+||.|.|+|++++.+||+++|||++..+.
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~   42 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRN   42 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeec
Confidence            47999999999999999999999999999863

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=97.11  E-value=0.00018  Score=53.79  Aligned_cols=31  Identities=26%  Similarity=0.590  Sum_probs=28.8

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      +|+||+|.|+|++++.+||+++|||++....
T Consensus         4 ~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~   34 (140)
T d1npba_           4 SLNHLTLAVSDLQKSVTFWHELLGLTLHARW   34 (140)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCEEEEEe
Confidence            6899999999999999999999999998754

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=96.94  E-value=0.0003  Score=52.47  Aligned_cols=43  Identities=16%  Similarity=0.417  Sum_probs=31.0

Q ss_pred             Cceeeeeec----CCHHHHHHHHHHhcCCEEEeeecCCCCcEEEEEcC
Q 022769          244 PLCQVMLRV----GDLDRAINFYKKAFGMELLRKRDNPDYKVNSYLLP  287 (292)
Q Consensus       244 ~l~hv~l~v----~D~~~s~~fY~~~lG~~~~~~~~~~~~~~~~~~~~  287 (292)
                      .+.|+.++|    .|++++.+||+++|||++..+.++++ .|...++.
T Consensus         5 ~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~   51 (137)
T d1twua_           5 SFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFG   51 (137)
T ss_dssp             SCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEE
T ss_pred             CCceEEEEEecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEec
Confidence            456665554    79999999999999999987654443 34544443

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=96.62  E-value=0.0067  Score=49.14  Aligned_cols=89  Identities=15%  Similarity=0.078  Sum_probs=61.5

Q ss_pred             ceEEEEEeeCCHHHHHHHHHH-cCCeeecCC----eecCCCCeEEEEEECCCC-CEEEEEEcCCC---------------
Q 022769          183 GFGHFGIAVEDVAKTVDLVKA-KGGKVTREP----GPVKGGNTVIAFIEDPDG-YKFELLERGPT---------------  241 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p----~~~~~g~~~~~y~~DPdG-~~iel~e~~~~---------------  241 (292)
                      .+.||++.|+|++++.+..++ .|+...+.-    ...+.+...+..+..|+| .++++.+....               
T Consensus         9 ~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~FL~~~~   88 (224)
T d1sp8a2           9 RFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLDHHG   88 (224)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHHHHHHT
T ss_pred             eeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHHHHhcc
Confidence            678999999999999998877 788754321    111223455667788887 66777764211               


Q ss_pred             CCCceeeeeecCCHHHHHHHHHHh---cCCEEE
Q 022769          242 PEPLCQVMLRVGDLDRAINFYKKA---FGMELL  271 (292)
Q Consensus       242 ~~~l~hv~l~v~D~~~s~~fY~~~---lG~~~~  271 (292)
                      ..++.|+++.|.|+.++.+..+..   .|++..
T Consensus        89 g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl  121 (224)
T d1sp8a2          89 GPGVQHMALASDDVLRTLREMQARSAMGGFEFM  121 (224)
T ss_dssp             SSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBC
T ss_pred             CCCceeEEEEeCCHHHHHHHHHhccccccceec
Confidence            136899999999999999988753   355544

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.62  E-value=0.00057  Score=49.28  Aligned_cols=30  Identities=10%  Similarity=0.019  Sum_probs=27.6

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .|.|+.|.|+|+++|.+||+++||+++...
T Consensus         2 ~l~~i~i~V~di~~a~~FYe~~lg~~~~~~   31 (115)
T d2i7ra1           2 NLNQLDIIVSNVPQVCADLEHILDKKADYA   31 (115)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTSCCSEE
T ss_pred             cceEEEEEECCHHHHHHHHHHhhCCceeee
Confidence            478999999999999999999999998764

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=96.59  E-value=0.0029  Score=48.00  Aligned_cols=84  Identities=18%  Similarity=0.255  Sum_probs=60.0

Q ss_pred             ceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCC----------CCCceeeeeec
Q 022769          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT----------PEPLCQVMLRV  252 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~----------~~~l~hv~l~v  252 (292)
                      |+.||.|.|+|++++.+.+.+.|++...   .+....  ...++.  |....+....+.          ...++|+.+.|
T Consensus         9 Gidhv~fav~d~~~~~~~~~~lGF~~~~---~~~~~~--~~l~~~--G~i~ll~~~~~~s~~~~~~~~hg~gv~hiaf~V   81 (150)
T d1cjxa1           9 GFEFIEFASPTPGTLEPIFEIMGFTKVA---THRSKN--VHLYRQ--GEINLILNNEPNSIASYFAAEHGPSVCGMAFRV   81 (150)
T ss_dssp             EEEEEEEECSSTTSSHHHHHHTTCEEEE---EESSSS--EEEEEE--TTEEEEEECCSSSHHHHHHHHHSSEEEEEEEEE
T ss_pred             CEEEEEEecCCHHHHHHHHHHhCCEEEe---cccceE--EEEEec--CcEEEEecCCCCCHhHhHHhhCCCceEEEEEEe
Confidence            8999999999999999999999998753   232211  222332  333333333221          23799999999


Q ss_pred             CCHHHHHHHHHHhcCCEEEeee
Q 022769          253 GDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       253 ~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      .|++++.+... .+|.+..+..
T Consensus        82 ~D~~~a~~~a~-~~Ga~~i~~~  102 (150)
T d1cjxa1          82 KDSQKAYNRAL-ELGAQPIHID  102 (150)
T ss_dssp             SCHHHHHHHHH-HTTCCBCCCC
T ss_pred             CCHHHHHHHHH-HCCCEEcccC
Confidence            99999999996 5999988654

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=96.49  E-value=0.001  Score=47.64  Aligned_cols=27  Identities=19%  Similarity=0.400  Sum_probs=24.3

Q ss_pred             eeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          248 VMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       248 v~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      -+|.|+|+++|++||+++|||++..+.
T Consensus         8 pvL~v~D~~~s~~FY~~~LG~~~~~~~   34 (120)
T d1xrka_           8 PVLTARDVAEAVEFWTDRLGFSRVFVE   34 (120)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             EEEEECCHHHHHHHHHHhhCCeEEEEC
Confidence            458999999999999999999998764

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=96.00  E-value=0.0046  Score=44.21  Aligned_cols=25  Identities=20%  Similarity=0.335  Sum_probs=23.1

Q ss_pred             eeecCCHHHHHHHHHHhcCCEEEee
Q 022769          249 MLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       249 ~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      +|.|+|+++|.+||+++|||++...
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~   34 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFG   34 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEE
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEec
Confidence            5899999999999999999998764

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=95.91  E-value=0.034  Score=41.97  Aligned_cols=104  Identities=13%  Similarity=0.080  Sum_probs=65.5

Q ss_pred             ceEEEEEeeCCHHHHHHHHHH-cCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcCCCCCCceeeeeecCCHHHHHHH
Q 022769          183 GFGHFGIAVEDVAKTVDLVKA-KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINF  261 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~-~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~~~~~~l~hv~l~v~D~~~s~~f  261 (292)
                      .+.|+++.|+|+++..+-..+ .|.++... .....+.....++....+.........+.+.++.|+.+.+.+++...++
T Consensus         5 rldHv~l~v~Dle~s~~FY~~vLG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~   83 (162)
T d1mpya2           5 RFDHALMYGDELPATYDLFTKVLGFYLAEQ-VLDENGTRVAQFLSLSTKAHDVAFIHHPEKGRLHHVSFHLETWEDLLRA   83 (162)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEE-EECTTCCEEEEEEESSSBSCSEEEEECSSSSEEEEEEEECSCHHHHHHH
T ss_pred             cccEEEEECCCHHHHHHHHHHccCCEEEEE-EccccccceeeeeecccccccccccccCCCCccceeEEEEeeehhhhhH
Confidence            689999999999999998775 78887532 1122233444444544444444555556677899999999988876665


Q ss_pred             HHH--hcCCEEEeeec--CCCCcEEEEEcC
Q 022769          262 YKK--AFGMELLRKRD--NPDYKVNSYLLP  287 (292)
Q Consensus       262 Y~~--~lG~~~~~~~~--~~~~~~~~~~~~  287 (292)
                      +..  ..|.+......  ..+..+.+++.-
T Consensus        84 ~~~L~~~gv~~~~~p~~~~~g~~~~~y~~D  113 (162)
T d1mpya2          84 ADLISMTDTSIDIGPTRHGLTHGKTIYFFD  113 (162)
T ss_dssp             HHHHHHHTCCEEEEEEECSSTTCEEEEEEC
T ss_pred             HHHHHHcCCccccCccccCCCCeEEEEEEC
Confidence            533  34776654321  223345554443

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=95.76  E-value=0.073  Score=37.97  Aligned_cols=98  Identities=16%  Similarity=0.122  Sum_probs=61.6

Q ss_pred             ceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEECCCCCEEEEEEcC-----------CCCCCceeeeee
Q 022769          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG-----------PTPEPLCQVMLR  251 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~DPdG~~iel~e~~-----------~~~~~l~hv~l~  251 (292)
                      .+.|+++.|.|+++..+-.++.|..+...   ......  ..+..+++..+.+....           +.+....|+.+.
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~Lg~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   76 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRKMGVEIPAE---ADSAPH--TEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFE   76 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCCCTT---GGGCSE--EEEECGGGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhCCccccc---cccccc--eeeeccceeeeeecccccccccCCCCCCCccccceeEeee
Confidence            46799999999999999888888876533   222222  34555677777776432           122355678888


Q ss_pred             cCCHHHHHHHHHHh--cCCEEEeeec-CCCCcEEEEE
Q 022769          252 VGDLDRAINFYKKA--FGMELLRKRD-NPDYKVNSYL  285 (292)
Q Consensus       252 v~D~~~s~~fY~~~--lG~~~~~~~~-~~~~~~~~~~  285 (292)
                      |.|++...+.|.++  .|.++..... .+.+.+..++
T Consensus        77 v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~  113 (128)
T d1klla_          77 FPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIV  113 (128)
T ss_dssp             CSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEE
T ss_pred             eccchhhHHHHHHHHhccCccccCCeEcCCCcEEEEE
Confidence            88766655555543  7888765433 3333344443

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.54  E-value=0.0027  Score=44.59  Aligned_cols=28  Identities=21%  Similarity=0.332  Sum_probs=24.9

Q ss_pred             eeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          247 QVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       247 hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      +..|.|+|++++.+||+++|||++....
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~   32 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDH   32 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEEC
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeecc
Confidence            3679999999999999999999998753

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=95.34  E-value=0.092  Score=41.28  Aligned_cols=90  Identities=17%  Similarity=0.169  Sum_probs=66.5

Q ss_pred             ceEEEEEeeC--CHHHHHHHHHH-cCCeeecCCe--e--cCCCCeEEEEEECCCC-CEEEEEEcCCC-------------
Q 022769          183 GFGHFGIAVE--DVAKTVDLVKA-KGGKVTREPG--P--VKGGNTVIAFIEDPDG-YKFELLERGPT-------------  241 (292)
Q Consensus       183 g~~hia~~V~--Dl~~~~~~L~~-~G~~i~~~p~--~--~~~g~~~~~y~~DPdG-~~iel~e~~~~-------------  241 (292)
                      ++.||++.|+  +++.+...+++ .|.+......  .  .+.+...+.-+.+|+| ..+.+.+..+.             
T Consensus         6 ~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL~~~   85 (199)
T d1t47a2           6 AIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLEFY   85 (199)
T ss_dssp             EEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHHHH
T ss_pred             eeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhhhhc
Confidence            7899999998  89999998886 4887644311  1  1335566777889987 55666654332             


Q ss_pred             -CCCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          242 -PEPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       242 -~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                       ..++.||++.|.|+.++++-.++ -|++....
T Consensus        86 ~g~GiQHIAl~tdDI~~av~~L~~-~G~~fL~~  117 (199)
T d1t47a2          86 GGAGVQHIALNTGDIVETVRTMRA-AGVQFLDT  117 (199)
T ss_dssp             TSCEEEEEEEECSCHHHHHHHHHH-TTCCBCCC
T ss_pred             CCCcceEEEEEcCCHHHHHHHHHH-cCCCCCCC
Confidence             13799999999999999999964 78877764

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=95.20  E-value=0.047  Score=41.90  Aligned_cols=84  Identities=15%  Similarity=0.190  Sum_probs=55.6

Q ss_pred             ceEEEEEeeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEE-CCCCCEEEEEEcCCCCCCceeeeeecCCHHHHHHH
Q 022769          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIE-DPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINF  261 (292)
Q Consensus       183 g~~hia~~V~Dl~~~~~~L~~~G~~i~~~p~~~~~g~~~~~y~~-DPdG~~iel~e~~~~~~~l~hv~l~v~D~~~s~~f  261 (292)
                      .++|+++.|+|+++..+..+..|.++... ...+.+.....++. +...+.+.+..  ....++.|+.+.+.+++...+.
T Consensus         5 rl~Hv~l~v~Dle~s~~FYe~LGf~~~d~-~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~H~~f~~~~~~~v~~~   81 (176)
T d1f1ua2           5 RLDHFNQVTPDVPRGRAYLEDLGFRVSED-IKDSDGVTYAAWMHRKQTVHDTALTG--GNGPRMHHVAFATHEKHNIIQI   81 (176)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCEEEEE-EECTTCCEEEEEEESSSSSCSEEEEE--SSBSEEEEEEEECSSHHHHHHH
T ss_pred             EeeeEEEEcCCHHHHHHHHHHCCCEEEEE-EecCCcceeeeeeccCccccceeccc--ccCCCccceeEEeccchhHHHH
Confidence            68899999999999988888889987532 11222333333334 33344555543  3345799999999988887776


Q ss_pred             HHHh--cCCE
Q 022769          262 YKKA--FGME  269 (292)
Q Consensus       262 Y~~~--lG~~  269 (292)
                      +...  .|..
T Consensus        82 ~~~l~~~g~~   91 (176)
T d1f1ua2          82 CDKMGALRIS   91 (176)
T ss_dssp             HHHHHHTTCG
T ss_pred             HHHHHHcCCc
Confidence            6533  5654

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.11  Score=41.27  Aligned_cols=90  Identities=16%  Similarity=0.117  Sum_probs=60.7

Q ss_pred             ceEEEEEeeCC--HHHHHHHHH-HcCCeeecCCe--ec--CCCCeEEEEEECCCC-CEEEEEEcCCC-------------
Q 022769          183 GFGHFGIAVED--VAKTVDLVK-AKGGKVTREPG--PV--KGGNTVIAFIEDPDG-YKFELLERGPT-------------  241 (292)
Q Consensus       183 g~~hia~~V~D--l~~~~~~L~-~~G~~i~~~p~--~~--~~g~~~~~y~~DPdG-~~iel~e~~~~-------------  241 (292)
                      .+.||++.|++  ++++.+..+ -.|....+.-.  .+  +.+..++..+..|+| ..+.+.+..+.             
T Consensus        24 ~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~~fl~~~  103 (210)
T d1sqia2          24 IIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQEYVDYN  103 (210)
T ss_dssp             EEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHHHHHHHHH
T ss_pred             eeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHHHHHHhhc
Confidence            57899999997  998888775 45776543211  11  123446677888987 66777765432             


Q ss_pred             -CCCceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          242 -PEPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       242 -~~~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                       ..++.||++.|.|+.++.+.+++ -|++..+.
T Consensus       104 ~G~GiQHIAf~t~DI~~av~~L~~-~Gv~fL~~  135 (210)
T d1sqia2         104 GGAGVQHIALRTEDIITTIRHLRE-RGMEFLAV  135 (210)
T ss_dssp             TSSEEEEEEEEESCHHHHHHHHHH-HTCCBCCC
T ss_pred             CCCCeeEEEEEcCCHHHHHHHHHH-cCCCCCCC
Confidence             12699999999999999999975 57766643

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.98  E-value=0.0098  Score=42.42  Aligned_cols=24  Identities=25%  Similarity=0.581  Sum_probs=21.7

Q ss_pred             eeecCCHHHHHHHHHHhcCCEEEee
Q 022769          249 MLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       249 ~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      .|.|+|+++|.+||++ |||++...
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~   30 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFR   30 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEE
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEe
Confidence            3899999999999987 99999875

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.69  E-value=0.0094  Score=43.60  Aligned_cols=28  Identities=25%  Similarity=0.456  Sum_probs=22.4

Q ss_pred             eeeeecCCHHHHHHHHHHhcCCEEEeee
Q 022769          247 QVMLRVGDLDRAINFYKKAFGMELLRKR  274 (292)
Q Consensus       247 hv~l~v~D~~~s~~fY~~~lG~~~~~~~  274 (292)
                      .+.+.+.|+++|++||+++||+++..+.
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~   37 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHS   37 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEE
Confidence            3667788999999999999999987654

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=94.34  E-value=0.1  Score=41.17  Aligned_cols=90  Identities=18%  Similarity=0.163  Sum_probs=63.3

Q ss_pred             ceEEEEEeeC--CHHHHHHHHHH-cCCeeecCCee-cCCCCeEEEEEECCCC-CEEEEEEcCCC-------------CCC
Q 022769          183 GFGHFGIAVE--DVAKTVDLVKA-KGGKVTREPGP-VKGGNTVIAFIEDPDG-YKFELLERGPT-------------PEP  244 (292)
Q Consensus       183 g~~hia~~V~--Dl~~~~~~L~~-~G~~i~~~p~~-~~~g~~~~~y~~DPdG-~~iel~e~~~~-------------~~~  244 (292)
                      .+.||++.|+  |++++....++ .|.+....-.. .+.+...+..+..|++ ..+.+.+....             ..+
T Consensus         5 ~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g~G   84 (203)
T d1cjxa2           5 VIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNGEG   84 (203)
T ss_dssp             EEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTSSB
T ss_pred             eeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCCCC
Confidence            5789999998  79999888875 48876533111 1223345566778875 66666544321             136


Q ss_pred             ceeeeeecCCHHHHHHHHHHhcCCEEEee
Q 022769          245 LCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (292)
Q Consensus       245 l~hv~l~v~D~~~s~~fY~~~lG~~~~~~  273 (292)
                      +.|+++.|.|+.++.+..++ -|++..+.
T Consensus        85 iqHIAf~vdDI~aav~~L~~-~Gv~fL~~  112 (203)
T d1cjxa2          85 IQHVAFLTDDLVKTWDALKK-IGMRFMTA  112 (203)
T ss_dssp             CCEEEEEESCHHHHHHHHHH-TTCCBCCC
T ss_pred             CceEEEEeCCHHHHHHHHHh-cCCccccC
Confidence            99999999999999999975 79888764

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.10  E-value=0.021  Score=46.26  Aligned_cols=32  Identities=16%  Similarity=0.174  Sum_probs=29.4

Q ss_pred             CceeeeeecCCHHHHHHHHHHhcCCEEEeeec
Q 022769          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRD  275 (292)
Q Consensus       244 ~l~hv~l~v~D~~~s~~fY~~~lG~~~~~~~~  275 (292)
                      +|+||+++|.|++++.+||.++||++......
T Consensus        22 ~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~   53 (230)
T d1sqda2          22 RLDHAVGNVPELGPALTYVAGFTGFHQFAEFT   53 (230)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC
T ss_pred             ccCcceecccCHHHHHHHHHHHcCCeeeEEec
Confidence            69999999999999999999999999887653

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.91  E-value=0.24  Score=35.81  Aligned_cols=23  Identities=22%  Similarity=0.310  Sum_probs=20.1

Q ss_pred             CCHHHHHHHHHHhcCCEEEeeec
Q 022769          253 GDLDRAINFYKKAFGMELLRKRD  275 (292)
Q Consensus       253 ~D~~~s~~fY~~~lG~~~~~~~~  275 (292)
                      .|.+++++||+++||+++.....
T Consensus        12 g~a~eAl~FY~~~fG~e~~~~~~   34 (137)
T d1u6la_          12 GNCREAFSCYHQHLGGTLEAMLP   34 (137)
T ss_dssp             SCHHHHHHHHHHHHCSEEEEEEE
T ss_pred             CCHHHHHHHHHHHCCCEEEEEEE
Confidence            49999999999999999987553

>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YecM (EC4020)
domain: Hypothetical protein YecM (EC4020)
species: Escherichia coli [TaxId: 562]

Probab=83.02  E-value=6.8  Score=29.58  Aligned_cols=78  Identities=15%  Similarity=0.122  Sum_probs=45.2

Q ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEEEEEeeCCCCceEEE-EE----eeCCCCceEEEEEEecCCCCCCcCCCceEEE
Q 022769          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNA-FL----GYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  187 (292)
Q Consensus       113 ~~i~Hv~L~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~-~l----~~g~~~~~~~l~l~~~~~~~~~~~g~g~~hi  187 (292)
                      ..++|+.++|.+.+.+.+|-+..+..-..-....-.|+.... -+    ..++ ..--.+|+..+.. ..+ +-.|+-||
T Consensus        42 ~~~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGRPI~l~~L~~Pl~~~~-~~I~ciELP~P~~-k~Y-p~eGWEHI  118 (190)
T d1k4na_          42 LTADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAH-WQFSIVELPWPGE-KRY-PHEGWEHI  118 (190)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETT-EEEEEEEEECCCS-SCC-SSCEEEEE
T ss_pred             ccCcEEEEeeCCHHHHHHHHHHHHHhchhhhcCeeCCeeEEEEEcCCCceeCC-cEEEEEEeCCCCC-CCC-CCCCceEE
Confidence            468999999999999999999887664433221112221111 11    1121 1112345555332 233 34599999


Q ss_pred             EEeeCC
Q 022769          188 GIAVED  193 (292)
Q Consensus       188 a~~V~D  193 (292)
                      .+.++.
T Consensus       119 ElVlp~  124 (190)
T d1k4na_         119 EIVLPG  124 (190)
T ss_dssp             EEECCS
T ss_pred             EEEecC
Confidence            999983