Citrus Sinensis ID: 022813

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-
MWIWRALILLQLVNGVLGWGKEGHFAICKIAEGYLTEDALAAVKELLPDSAEGDLANVCSWADEVRFHMRWSSPLHYVDTPDFMCNYKYCRDCHDSVGRKNRCVTGAIYNYTMQLKSGYQDSISVEKYNLTEALMFLSHFIGDVHQPLHVGFIGDKGGNTITVRWYRRKTNLHHVWDTMIIDSALKTYYDSDIAVMIQSIQRNITDGWSNDVSSWENCANNQTVCPNGYASESVSLACKFAYRNATPGTTLEDDYFLTRLPIVEKRLAQSGIRLAATLNRIFSSQIKIAQL
cHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEcccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccHHHccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccccc
MWIWRALILLQLVNGVLGWGKEGHFAICKIAEGYLTEDALAAVKELLPDSAEGDLANVCSWADEVRFHMRWSSPLHYVDTPDFMCNYKYCRDCHDSVGRKNRCVTGAIYNYTMQLKSGYQDSISVEKYNLTEALMFLSHFIGDVHQPLHVGFIGDKGGNTITVRWYRRKTNLHHVWDTMIIDSALKTYYDSDIAVMIQSIQRNITDGWSNDVSSWENCANNQTVCPNGYASESVSLACKFAYRNATPGTTLEDDYFLTRLPIVEKRLAQSGIRLAATLNRIFSSQI*****
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SSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MWIWRALILLQLVNGVLGWGKEGHFAICKIAEGYLTEDALAAVKELLPDSAEGDLANVCSWADEVRFHMRWSSPLHYVDTPDFMCNYKYCRDCHDSVGRKNRCVTGAIYNYTMQLKSGYQDSISVEKYNLTEALMFLSHFIGDVHQPLHVGFIGDKGGNTITVRWYRRKTNLHHVWDTMIIDSALKTYYDSDIAVMIQSIQRNITDGWSNDVSSWENCANNQTVCPNGYASESVSLACKFAYRNATPGTTLEDDYFLTRLPIVEKRLAQSGIRLAATLNRIFSSQIKIAQL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Endonuclease 4 Probable endonuclease (By similarity). Can not hydrolyze single stranded DNA and does not cleave mismatches.confidentF4JJL0
Nuclease S1 Hydrolyzes only single stranded DNA and RNA without apparent specificity for bases.probableP24021

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.1.-.-Acting on ester bonds.probable
3.1.30.-Endoribonucleases active with either ribo- or deoxyribonucleic acid and producing 5'-phosphomonoesters.probable
3.1.30.1Transferred entry: 3.1.30.1.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3SNG, chain A
Confidence level:very confident
Coverage over the Query: 19-284
View the alignment between query and template
View the model in PyMOL