Citrus Sinensis ID: 022835

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-
Protein Sequence
MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Secondary Structure (PSIPRED)
cccccccccccccEEcccccccEEEEEEEEEccHHHHHHHHHHccccEEEEEEEcccccEEEEEEEccccccccEEEEEEcccccccccccccEEEEEEEcHHHHHHHHHHHcccEEEEccccccccccEEEEEEcccccEEEEEEcccccccccccEEEEccHHHHHHHHHHHcccEEEEEEEcccccEEEEEEEccccccccEEEEEEEccccccccccccEEEEEEEccHHHHHHHHHHHHHHcccEEcccccccccccEEEEEEEcccccEEEEEcccccHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHccccccccEEEEEEEEEccHHHHHHHHHHHHccEEEEEccccccccEEEEEccccccccEEEEEEEcccccccccccccEEEEEEcccHHHHHHHHHHccccEEEcccccccccEEEEEEEcccccEEEEEEcccccccccEEEEEEccHHHHHHHHHHHHccEEEEEcccccccEEEEEEEcccccccEEEEEEEcccccEccccccEEEEEEEcccHHHHHHHHHHHcHHcccEEEccccccccccEEEEEEEcccccEEEEEccHHHHHHcccc
Coil and Loop (DISEMBL)
MAEASPAAANAELLewpkkdkrrFLHAVYRVGDLDRTIKFYTECFGmkllrkrdvpeekysnaflgfgpeqSHFVVELTYNygvtsydigtgfghfaIATEDVYKLVENIRAkggnvtrepgplkggtthiafvkdpdgyIFELiqrgptpeplCQVMLRVGDLGRSIKFYEKALGMKLlrtvdkpeyKYTLAMLGYAEEDQTTVLELTYNygvteytkgnAYAQVAISTDDVYKSAEVVNLVTQELggkitrqpgpipglntkitsfvdpdgwktvLVDNEDFLKELQSE
Flexible Loop (DISEMBL)
MAEASPAAANAellewpkkdkrrfLHAVyrvgdldrtiKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKggnvtrepgplkgGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKAlgmkllrtvdKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQelggkitrqpgpipglNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Low Complexity Region (SEG)
MaeaspaaanaelleWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Disordered region (IsUnstruct)
*************LEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF*******
Disordered Region (DISOPRED)
******A*ANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED*L******
Disordered Region (DISEMBL)
*********NAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Disordered Region (DISPRO)
**********AELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKEL***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	291	2.2.26 [Sep-21-2011]
Q39366	282	Putative lactoylglutathio	N/A	no	0.965	0.996	0.819	1e-138
Q948T6	291	Lactoylglutathione lyase	yes	no	0.993	0.993	0.804	1e-136
Q8W593	350	Probable lactoylglutathio	no	no	0.975	0.811	0.729	1e-125
P46235	138	Probable lactoylglutathio	yes	no	0.415	0.876	0.616	2e-41
Q9KT93	138	Probable lactoylglutathio	no	no	0.422	0.891	0.590	5e-40
P0A1Q2	135	Lactoylglutathione lyase	yes	no	0.412	0.888	0.588	3e-38
P0A1Q3	135	Lactoylglutathione lyase	N/A	no	0.412	0.888	0.588	3e-38
P0AC83	135	Lactoylglutathione lyase	yes	no	0.412	0.888	0.588	5e-38
P0AC81	135	Lactoylglutathione lyase	N/A	no	0.412	0.888	0.588	5e-38
P0AC82	135	Lactoylglutathione lyase	N/A	no	0.412	0.888	0.588	5e-38

>sp|Q39366|LGUL_BRAOG Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1

 Score =  490 bits (1261), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 231/282 (81%), Positives = 259/282 (91%), Gaps = 1/282 (0%)

Query: 8   AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF 67
           A NA+L+EWPKKDKRRFLH VYRVGDLDRTI+FYTECFGMK+LRKRDVPEEKYSNAFLGF
Sbjct: 2   AENADLVEWPKKDKRRFLHVVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGF 61

Query: 68  GPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGG 127
           GPE S+FVVELTYNYGV+SYDIGTGFGHFAI+T+DV K+VE +RAKGGNVTREPGP+KGG
Sbjct: 62  GPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGG 121

Query: 128 TTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE 187
            + IAFVKDPDGY FELIQRGPTPEPLCQVMLRVGDL R++KF EKALGM+LLR +++PE
Sbjct: 122 GSVIAFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPE 181

Query: 188 YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL 247
           Y  T+ M+GYAEE ++ VLELTYNYGVTEYTKGNAYAQ+AI TDDVYKSAEVV +V QEL
Sbjct: 182 YN-TIGMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQEL 240

Query: 248 GGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           GGKITR+ GP+PGL TKI SF+DPDGWK VLVDNEDFLKEL+
Sbjct: 241 GGKITREAGPLPGLGTKIVSFLDPDGWKQVLVDNEDFLKELE 282

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Brassica oleracea var. gemmifera (taxid: 178616)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2

 Score =  485 bits (1248), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 234/291 (80%), Positives = 257/291 (88%), Gaps = 2/291 (0%)

Query: 1   MAEASPAAANAEL-LEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK 59
           MA  S A  + E+ LEWPKKDK+R LHAVYRVGDLDRTIK YTECFGMKLLRKRDVPEEK
Sbjct: 1   MASGSEAEKSPEVVLEWPKKDKKRLLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVPEEK 60

Query: 60  YSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGG-NVT 118
           Y+NAFLGFGPE ++F +ELTYNYGV  YDIG GFGHFAIATEDVYKL E I++     +T
Sbjct: 61  YTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCCKIT 120

Query: 119 REPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMK 178
           REPGP+KGG+T IAF +DPDGY+FELIQRGPTPEPLCQVMLRVGDL RSIKFYEKALGMK
Sbjct: 121 REPGPVKGGSTVIAFAQDPDGYMFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKALGMK 180

Query: 179 LLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE 238
           LLR  D P+YKYT+AMLGYA+ED+TTV+ELTYNYGVTEYTKGNAYAQVAI T+DVYKSAE
Sbjct: 181 LLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAE 240

Query: 239 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
            V LVT+ELGGKI RQPGP+PGLNTKI SF+DPDGWK VLVDN DFLKELQ
Sbjct: 241 AVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADFLKELQ 291

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=2 SV=1

 Score =  449 bits (1155), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 210/288 (72%), Positives = 243/288 (84%), Gaps = 4/288 (1%)

Query: 2   AEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYS 61
            +A+ A    +LL W K DKRR LH VYRVGD+DRTIKFYTEC GMKLLRKRD+PEEKY+
Sbjct: 67  GKAAQATTQDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYT 126

Query: 62  NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP 121
           NAFLG+GPE SHFV+ELTYNYGV  YDIG GFGHF IA +DV K VE ++AKGG V+REP
Sbjct: 127 NAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREP 186

Query: 122 GPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLR 181
           GP+KGG T IAF++DPDGY FEL++RGPTPEPLCQVMLRVGDL R+IKFYEKA GM+LLR
Sbjct: 187 GPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLR 246

Query: 182 TVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN 241
           T D PEYKYT+AM+GY  ED+  VLELTYNYGVTEY KGNAYAQ+AI TDDVYK+AE + 
Sbjct: 247 TRDNPEYKYTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIK 306

Query: 242 LVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           L     GGKITR+PGP+PG++TKIT+ +DPDGWK+V VDN DFLKEL+
Sbjct: 307 L----FGGKITREPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P46235|LGUL_VIBPA Probable lactoylglutathione lyase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=gloA PE=3 SV=2

 Score =  169 bits (429), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 95/125 (76%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDLD++IKFYTE  GM+LLR  +  E +Y+ AF+G+G E    V+ELTYN+
Sbjct: 5   RILHTMLRVGDLDKSIKFYTEVMGMQLLRTNENKEYEYTLAFVGYGDESQGAVIELTYNW 64

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           G T YD+GT FGH AI  +D+Y   + I+A GGNVTRE GP+KGGTTHIAFVKDPDGY+ 
Sbjct: 65  GKTEYDLGTAFGHIAIGVDDIYATCDAIKAAGGNVTREAGPVKGGTTHIAFVKDPDGYMI 124

Query: 143 ELIQR 147
           ELIQ 
Sbjct: 125 ELIQN 129

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Vibrio parahaemolyticus (taxid: 670)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9KT93|LGUL_VIBCH Probable lactoylglutathione lyase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=gloA PE=3 SV=2

 Score =  164 bits (416), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 75/127 (59%), Positives = 93/127 (73%)

Query: 21  KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
             R LH + RVGDLD++I+FYT+  GM LLRK +  E KY+ AFLG+G E    V+ELTY
Sbjct: 3   NHRILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTY 62

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
           N+GV  Y+ G  +GH AI  +D+Y   + I+A GG VTREPGP+KGGTTHIAFVKDPDGY
Sbjct: 63  NWGVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGY 122

Query: 141 IFELIQR 147
           + ELIQ 
Sbjct: 123 MIELIQN 129

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q2|LGUL_SALTY Lactoylglutathione lyase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gloA PE=3 SV=1

 Score =  159 bits (401), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 91/124 (73%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT   GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV SYD+G  +GH A++ ++  +  E IR  GGNVTRE GP+KGG+T IAFV+DPDGY  
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q3|LGUL_SALTI Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1

 Score =  159 bits (401), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 91/124 (73%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT   GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV SYD+G  +GH A++ ++  +  E IR  GGNVTRE GP+KGG+T IAFV+DPDGY  
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhi (taxid: 90370)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC83|LGUL_SHIFL Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1

 Score =  158 bits (399), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Shigella flexneri (taxid: 623)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC81|LGUL_ECOLI Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1

 Score =  158 bits (399), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli (strain K12) (taxid: 83333)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC82|LGUL_ECO57 Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1

 Score =  158 bits (399), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli O157:H7 (taxid: 83334)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
2213425	291	hypothetical protein [Citrus x paradisi]	1.0	1.0	0.993	1e-168
211906514	289	lactoylglutathione lyase [Gossypium hirs	0.993	1.0	0.868	1e-149
359483362	292	PREDICTED: lactoylglutathione lyase [Vit	1.0	0.996	0.862	1e-149
356531939	296	PREDICTED: putative lactoylglutathione l	0.986	0.969	0.871	1e-148
356555674	287	PREDICTED: putative lactoylglutathione l	0.986	1.0	0.878	1e-148
224078584	294	predicted protein [Populus trichocarpa]	1.0	0.989	0.873	1e-148
449433964	292	PREDICTED: putative lactoylglutathione l	1.0	0.996	0.856	1e-146
255554865	280	lactoylglutathione lyase, putative [Rici	0.938	0.975	0.904	1e-143
388520197	284	unknown [Lotus japonicus]	0.962	0.985	0.864	1e-143
312281931	289	unnamed protein product [Thellungiella h	0.993	1.0	0.830	1e-142

>gi|2213425|emb|CAB09799.1| hypothetical protein [Citrus x paradisi]

 Score =  595 bits (1535), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 289/291 (99%), Positives = 290/291 (99%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY
Sbjct: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE
Sbjct: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL
Sbjct: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV
Sbjct: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 291
           NLVTQELGGKITRQPG IPGLNTKITSFVDPDGWKTVLVDNEDFLKE+QSE
Sbjct: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 291

Source: Citrus x paradisi

Species: Citrus x paradisi

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|211906514|gb|ACJ11750.1| lactoylglutathione lyase [Gossypium hirsutum]

 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 251/289 (86%), Positives = 273/289 (94%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAE S A  + ELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD+PEEKY
Sbjct: 1   MAEGSAAVPSTELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 60

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           SNAFLGFGPE+SHFVVELTYNYGVTSYDIGTGFGHFAIAT DVYK+VE+IRAKGGN+TRE
Sbjct: 61  SNAFLGFGPEESHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKMVEDIRAKGGNITRE 120

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG++ IAFVKDPDGYIFELIQR  TPEPLCQVMLRVGDL RS+KFYEKALGMKL+
Sbjct: 121 PGPVKGGSSVIAFVKDPDGYIFELIQRASTPEPLCQVMLRVGDLDRSVKFYEKALGMKLV 180

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           + VD+PEYKY++AM+GYAEE +TTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKS EVV
Sbjct: 181 KKVDRPEYKYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSGEVV 240

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
             V QELGGK+TR+PGPIPG+NTKITSF+DPDGWKTVLVDNEDFLKEL+
Sbjct: 241 EHVIQELGGKVTRKPGPIPGINTKITSFLDPDGWKTVLVDNEDFLKELK 289

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483362|ref|XP_002273346.2| PREDICTED: lactoylglutathione lyase [Vitis vinifera] gi|302144130|emb|CBI23235.3| unnamed protein product [Vitis vinifera]

 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 251/291 (86%), Positives = 274/291 (94%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAEA+P   + ELLEWPKKDKRRFLH VYRVGDLDRTIKFYTECFGMKLLRKRD+PEEKY
Sbjct: 1   MAEAAPVVPSDELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 60

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           +NAFLGFGPE+++FVVELTYNYGV  YDIGTGFGHFAIAT+DVYK+VE+IRAKGG +TRE
Sbjct: 61  TNAFLGFGPEETNFVVELTYNYGVDKYDIGTGFGHFAIATQDVYKMVEDIRAKGGIITRE 120

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG + IAF KDPDGYIFELIQRGPTPEPLCQVMLRVGDL RSIKFYEKALGMK++
Sbjct: 121 PGPVKGGKSVIAFAKDPDGYIFELIQRGPTPEPLCQVMLRVGDLERSIKFYEKALGMKMV 180

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           +  D+PEYKY++AM+GYAEE +TTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV
Sbjct: 181 KKTDRPEYKYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 291
           NLVT+ELGGKITRQPGPIPGLNTKITSF+DPDGWKTVLVDNEDFLKEL  E
Sbjct: 241 NLVTKELGGKITRQPGPIPGLNTKITSFLDPDGWKTVLVDNEDFLKELHKE 291

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531939|ref|XP_003534533.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 252/289 (87%), Positives = 273/289 (94%), Gaps = 2/289 (0%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAEA+   +NAELLEWPKKDKRRFLH VYRVGDLDRTIKFYTECFGMKLLRKRD+PEEKY
Sbjct: 10  MAEAT--QSNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 67

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           +NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT DVYKLVE+IRAKGGN+TRE
Sbjct: 68  ANAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGNITRE 127

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG + IAFVKDPDGY FELIQR  TPEPLCQVMLRVGDL RSIKFYEK LG++++
Sbjct: 128 PGPVKGGKSVIAFVKDPDGYAFELIQRSSTPEPLCQVMLRVGDLERSIKFYEKTLGLRVV 187

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           +  D+PEYKYT+AMLGYAEE +TTVLELTYNYGVTEYTKGNAYAQVAI TDDVYKSAEVV
Sbjct: 188 KKTDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVV 247

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           N+VTQELGGKITRQPGP+PGLNTKITSF+DPDGWKTVLVDN+DFLKEL+
Sbjct: 248 NIVTQELGGKITRQPGPVPGLNTKITSFLDPDGWKTVLVDNQDFLKELE 296

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555674|ref|XP_003546155.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 254/289 (87%), Positives = 274/289 (94%), Gaps = 2/289 (0%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAEA+   +NAELLEWPKKDKRRFLH VYRVGDLDRTIKFYTECFGMKLLRKRD+PEEKY
Sbjct: 1   MAEAT--QSNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 58

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           +NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT DVYKLVE+IRAKGGNVTRE
Sbjct: 59  ANAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGNVTRE 118

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG + IAFVKDPDGY FELIQR  TPEPLCQVMLRVGDL RSIKFYEKALG++++
Sbjct: 119 PGPVKGGKSVIAFVKDPDGYAFELIQRPSTPEPLCQVMLRVGDLERSIKFYEKALGLRVV 178

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           +  D+PEYKYT+AMLGYAEE +TTVLELTYNYGVTEYTKGNAYAQVAI TDDVYKSAEVV
Sbjct: 179 KKTDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVV 238

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           N+VTQELGGKITRQPGPIPGLNTKIT+F+DPDGWKTVLVDN+DFLKEL+
Sbjct: 239 NIVTQELGGKITRQPGPIPGLNTKITAFLDPDGWKTVLVDNQDFLKELE 287

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078584|ref|XP_002305564.1| predicted protein [Populus trichocarpa] gi|222848528|gb|EEE86075.1| predicted protein [Populus trichocarpa]

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 256/293 (87%), Positives = 273/293 (93%), Gaps = 2/293 (0%)

Query: 1   MAEASPAAA--NAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE 58
           MAE +  A   NAELLEWPKKDKRR LHAVYRVGDLDRTIKFYTE FGMKLLR RD+PEE
Sbjct: 1   MAEEAAKAVTPNAELLEWPKKDKRRLLHAVYRVGDLDRTIKFYTEGFGMKLLRHRDIPEE 60

Query: 59  KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVT 118
           KYSNAFLGFGPE+S+FVVELTYNYGVTSYDIG GFGHFAIATEDVYKLVE +RA GGN+T
Sbjct: 61  KYSNAFLGFGPEESNFVVELTYNYGVTSYDIGEGFGHFAIATEDVYKLVEKLRALGGNIT 120

Query: 119 REPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMK 178
           REPGP+KGG + IAFVKDPDGY FELIQRGPTPEPLCQ+MLRVGDL RSIKFYEKALGMK
Sbjct: 121 REPGPVKGGASVIAFVKDPDGYAFELIQRGPTPEPLCQLMLRVGDLDRSIKFYEKALGMK 180

Query: 179 LLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE 238
           LLR +D+PEYKYTLAM+GYA+E +TTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE
Sbjct: 181 LLRKIDRPEYKYTLAMMGYADEYETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE 240

Query: 239 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 291
           VVNLVTQELGGKITRQPGPIPG+NTKITSF+DPDGWK+VLVDNEDFLKEL  E
Sbjct: 241 VVNLVTQELGGKITRQPGPIPGINTKITSFLDPDGWKSVLVDNEDFLKELHKE 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433964|ref|XP_004134766.1| PREDICTED: putative lactoylglutathione lyase-like [Cucumis sativus] gi|449479479|ref|XP_004155610.1| PREDICTED: putative lactoylglutathione lyase-like [Cucumis sativus]

 Score =  522 bits (1345), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 250/292 (85%), Positives = 273/292 (93%), Gaps = 1/292 (0%)

Query: 1   MAEASPA-AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK 59
           MAEA+ + A NAELLEWPKKDKRRFLH VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK
Sbjct: 1   MAEAAASLAPNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK 60

Query: 60  YSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTR 119
           YSNAFLGFGPE S+FVVELTYNYGV+SYDIG+GFGHFAIAT+DVYKLVE+IRAKGG +TR
Sbjct: 61  YSNAFLGFGPEDSNFVVELTYNYGVSSYDIGSGFGHFAIATQDVYKLVEDIRAKGGIITR 120

Query: 120 EPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           EPGP+KGG++ IAF KDPDGYIFELIQRGPTPEPLCQVMLRVGDL RSIKFY+KALGM+L
Sbjct: 121 EPGPVKGGSSVIAFAKDPDGYIFELIQRGPTPEPLCQVMLRVGDLERSIKFYDKALGMRL 180

Query: 180 LRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEV 239
           L+ VD+PEYKYTLAM+GYA+E +TTVLELTYNYGVTEYTKGNAYAQVAI TDDVYKSAEV
Sbjct: 181 LKKVDRPEYKYTLAMMGYADEPETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEV 240

Query: 240 VNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQSE 291
           VN V QELGGKITRQPGP+PG+ TKI SF+DPDGWKTVLVDN DF KEL ++
Sbjct: 241 VNQVNQELGGKITRQPGPLPGIGTKIVSFLDPDGWKTVLVDNADFQKELDNQ 292

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554865|ref|XP_002518470.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223542315|gb|EEF43857.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 247/273 (90%), Positives = 261/273 (95%)

Query: 4   ASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNA 63
           A   A NA++LEWPKKDKRR LHAVYRVGDLDRTIKFYTECFGMKLLRKRD+PEEKYSNA
Sbjct: 3   AEATAPNADVLEWPKKDKRRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKYSNA 62

Query: 64  FLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGP 123
           FLGFGPE+++FVVELTYNYGVTSYDIGTGFGHFAIAT+DVYKLVE + AKGG VTREPGP
Sbjct: 63  FLGFGPEETNFVVELTYNYGVTSYDIGTGFGHFAIATQDVYKLVEEVLAKGGAVTREPGP 122

Query: 124 LKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTV 183
           +KGGTT IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDL RSI+FYEKALGMKLLR V
Sbjct: 123 VKGGTTVIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLDRSIRFYEKALGMKLLRKV 182

Query: 184 DKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV 243
           DKPEYKYTLAM+GYA+E +TTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV
Sbjct: 183 DKPEYKYTLAMMGYADEYETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV 242

Query: 244 TQELGGKITRQPGPIPGLNTKITSFVDPDGWKT 276
           TQELGGKITRQPGPIPGLNTKITSF+DPDGWKT
Sbjct: 243 TQELGGKITRQPGPIPGLNTKITSFLDPDGWKT 275

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520197|gb|AFK48160.1| unknown [Lotus japonicus]

 Score =  513 bits (1321), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 242/280 (86%), Positives = 263/280 (93%)

Query: 10  NAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGP 69
           NAELL+W KKDKRRFLHAVYRVGDLDRTIKFYTECFGM+LLRKRD+PEEKY+NAFLGFG 
Sbjct: 5   NAELLDWSKKDKRRFLHAVYRVGDLDRTIKFYTECFGMQLLRKRDIPEEKYANAFLGFGS 64

Query: 70  EQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTT 129
           EQSHFVVELTYNYGVTSYDIGTGFGHFAIAT DVYK VE++RAKGGNVTREPGP+KGG+T
Sbjct: 65  EQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKFVEDVRAKGGNVTREPGPVKGGST 124

Query: 130 HIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK 189
            IAFVKDPDGY+FE+IQR  TPEPLCQVMLRVGDL RSIKFYEKALG+K+++  D+PE K
Sbjct: 125 VIAFVKDPDGYLFEIIQRASTPEPLCQVMLRVGDLERSIKFYEKALGLKVVKKTDRPEQK 184

Query: 190 YTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG 249
           YT+AMLGYAEE +T VLELTYNYGVTEYTKGNAYAQVAI TDDVYKSAE+VNL TQE GG
Sbjct: 185 YTIAMLGYAEEHETIVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAELVNLATQEFGG 244

Query: 250 KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
           KITRQPGPIPGLNTKI SF+DPDGWKTVLVDN+DFLKEL+
Sbjct: 245 KITRQPGPIPGLNTKIASFLDPDGWKTVLVDNQDFLKELE 284

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312281931|dbj|BAJ33831.1| unnamed protein product [Thellungiella halophila]

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 240/289 (83%), Positives = 265/289 (91%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAEAS  A NAELL+WPKKD RRFLH VYRVGDLDRTI+FYTECFGMKLLRKRDVPEEKY
Sbjct: 1   MAEASAVAPNAELLDWPKKDNRRFLHVVYRVGDLDRTIEFYTECFGMKLLRKRDVPEEKY 60

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           SNAFLGFGPE S+FVVELTYNYGV+SYDIGTGFGHFAI+T+DV K+VE +RAKGGNVTRE
Sbjct: 61  SNAFLGFGPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVETVRAKGGNVTRE 120

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG + IAFVKDPDGY FELIQRGPTPEPLCQVMLR GDL R+IKFYEKALGM+LL
Sbjct: 121 PGPVKGGNSVIAFVKDPDGYAFELIQRGPTPEPLCQVMLRTGDLDRAIKFYEKALGMRLL 180

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           R +++PEYKYT+ M+GYAEE +T VLELTYNYGVTEYTKGNAYAQ+AI TDDVYKS EVV
Sbjct: 181 RRIERPEYKYTIGMMGYAEEYETIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSGEVV 240

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
            +V QELGGKITR+ GP+PGL TKI SF+DPDGWKTVLVDN+DFLKEL+
Sbjct: 241 KIVNQELGGKITREAGPLPGLGTKIVSFLDPDGWKTVLVDNKDFLKELE 289

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
TAIR|locus:2019574	350	AT1G67280 [Arabidopsis thalian	0.927	0.771	0.751	5e-115
UNIPROTKB|Q9KT93	138	gloA "Probable lactoylglutathi	0.426	0.898	0.604	2.1e-38
TIGR_CMR|VC_1010	138	VC_1010 "lactoylglutathione ly	0.426	0.898	0.604	2.1e-38
UNIPROTKB|P0AC81	135	gloA "GloA" [Escherichia coli	0.426	0.918	0.588	1.3e-36
TIGR_CMR|SO_2044	136	SO_2044 "lactoylglutathione ly	0.426	0.911	0.584	1.5e-35
DICTYBASE|DDB_G0291265	136	gloA "glyoxylase I" [Dictyoste	0.426	0.911	0.548	3.2e-33
ASPGD|ASPL0000011175	318	AN4174 [Emericella nidulans (t	0.721	0.660	0.297	2.5e-26
POMBASE|SPBC12C2.12c	302	glo1 "glyoxalase I" [Schizosac	0.529	0.509	0.338	1.3e-24
RGD|1307010	298	Glod4 "glyoxalase domain conta	0.845	0.825	0.298	6.1e-23
UNIPROTKB|Q9HC38	313	GLOD4 "Glyoxalase domain-conta	0.718	0.667	0.295	1.1e-22

TAIR|locus:2019574 AT1G67280 [Arabidopsis thaliana (taxid:3702)]

 Score = 1134 (404.2 bits), Expect = 5.0e-115, P = 5.0e-115
 Identities = 206/274 (75%), Positives = 236/274 (86%)

Query:    16 WPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFV 75
             W K DKRR LH VYRVGD+DRTIKFYTEC GMKLLRKRD+PEEKY+NAFLG+GPE SHFV
Sbjct:    81 WVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFV 140

Query:    76 VELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVK 135
             +ELTYNYGV  YDIG GFGHF IA +DV K VE ++AKGG V+REPGP+KGG T IAF++
Sbjct:   141 IELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKTVIAFIE 200

Query:   136 DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAML 195
             DPDGY FEL++RGPTPEPLCQVMLRVGDL R+IKFYEKA GM+LLRT D PEYKYT+AM+
Sbjct:   201 DPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYKYTIAMM 260

Query:   196 GYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP 255
             GY  ED+  VLELTYNYGVTEY KGNAYAQ+AI TDDVYK+AE + L     GGKITR+P
Sbjct:   261 GYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKL----FGGKITREP 316

Query:   256 GPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
             GP+PG++TKIT+ +DPDGWK+V VDN DFLKEL+
Sbjct:   317 GPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA

UNIPROTKB|Q9KT93 gloA "Probable lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 75/124 (60%), Positives = 93/124 (75%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
             R LH + RVGDLD++I+FYT+  GM LLRK +  E KY+ AFLG+G E    V+ELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:    83 GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
             GV  Y+ G  +GH AI  +D+Y   + I+A GG VTREPGP+KGGTTHIAFVKDPDGY+ 
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   143 ELIQ 146
             ELIQ
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

TIGR_CMR|VC_1010 VC_1010 "lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 75/124 (60%), Positives = 93/124 (75%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
             R LH + RVGDLD++I+FYT+  GM LLRK +  E KY+ AFLG+G E    V+ELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:    83 GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
             GV  Y+ G  +GH AI  +D+Y   + I+A GG VTREPGP+KGGTTHIAFVKDPDGY+ 
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   143 ELIQ 146
             ELIQ
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

UNIPROTKB|P0AC81 gloA "GloA" [Escherichia coli K-12 (taxid:83333)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
             R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct:     2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query:    83 GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
             GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct:    62 GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query:   143 ELIQ 146
             ELI+
Sbjct:   122 ELIE 125

GO:0016151 "nickel cation binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

TIGR_CMR|SO_2044 SO_2044 "lactoylglutathione lyase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 73/125 (58%), Positives = 90/125 (72%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS-HFVVELTYN 81
             + LH + RVG+L+R+I FYT+  GMKLLR  + PE KYS AF+G+G E +   V+ELTYN
Sbjct:     3 QLLHTMIRVGNLERSIAFYTQVLGMKLLRTSENPEYKYSLAFVGYGEESTGQAVIELTYN 62

Query:    82 YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
             +G   YD+GTGFGH AI  +D+Y   E I A GG VTR PGP+ GGTT IAFV+DPDGY 
Sbjct:    63 WGTEKYDLGTGFGHIAIGDDDIYARCEAIAAAGGKVTRAPGPVAGGTTEIAFVEDPDGYK 122

Query:   142 FELIQ 146
              E IQ
Sbjct:   123 IEFIQ 127

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

DICTYBASE|DDB_G0291265 gloA "glyoxylase I" [Dictyostelium discoideum (taxid:44689)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 68/124 (54%), Positives = 89/124 (71%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
             R LH + RVG+L+++++FY +  GMKLLRK +  E KY+ AF+G+  E  + V+ELTYN+
Sbjct:     3 RILHTMLRVGNLEKSLQFYIDVLGMKLLRKSENVEYKYTLAFVGYTNEDENAVIELTYNW 62

Query:    83 GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
             GV  Y++GT FGH AI  +DVY+ VE IR  GG V RE  P+ GGTT IAFV+DPD Y  
Sbjct:    63 GVEKYELGTAFGHIAIGVDDVYETVERIRKSGGKVAREAAPVLGGTTVIAFVEDPDNYKI 122

Query:   143 ELIQ 146
             ELIQ
Sbjct:   123 ELIQ 126

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006749 "glutathione metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=IEA

ASPGD|ASPL0000011175 AN4174 [Emericella nidulans (taxid:162425)]

 Score = 217 (81.4 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
 Identities = 72/242 (29%), Positives = 113/242 (46%)

Query:    70 EQSH-FVVELTYNYGVTSYDIGT--GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG 126
             E +H +  E   NY +T+ +     G+GH AI+ +++    + +   G    ++    +G
Sbjct:    72 ELTHNYGTENDPNYSITNGNTEPHRGYGHIAISVDNIEAACQRLEDAGYAFQKKL--TEG 129

Query:   127 GTTHIAFVKDPDGYIFELIQR-----GPTPEP----LCQVMLRVGDLGRSIKFYEKALGM 177
                HIAFVKDPDGY  E+I+R       + +P    L   MLRV D   S+K+Y++ LGM
Sbjct:   130 RMRHIAFVKDPDGYWVEIIKRRDEAMSTSTDPATYRLNHTMLRVKDAEASLKYYQEVLGM 189

Query:   178 KLLRTVDKPEYKYTLAMLGY-AEEDQTT------------VLELTYNYGVTEYTKGNAYA 224
              L+RT++  E  + L  LGY A   Q T            +LELT+NYG TE  +G  Y 
Sbjct:   190 TLVRTIENKEAAFNLYFLGYPASNPQATEGANNPVAEWEGLLELTWNYG-TEKQEGKVYH 248

Query:   225 QVAISTDD---VYKSAEVVNLVTQELGG-KITRQPGPIPGLNTKITSFVDPDGWKTVLVD 280
                        +  S + +N   +     K+  +     G    +   +DPDG+   ++ 
Sbjct:   249 NGNDEPQGFGHICVSVDDLNAACERFESLKVNWKKRLTDGRMKNVAFLLDPDGYWIEVIQ 308

Query:   281 NE 282
             NE
Sbjct:   309 NE 310

GO:0009438 "methylglyoxal metabolic process" evidence=RCA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;RCA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006749 "glutathione metabolic process" evidence=IEA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IEA

POMBASE|SPBC12C2.12c glo1 "glyoxalase I" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 192 (72.6 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
 Identities = 62/183 (33%), Positives = 87/183 (47%)

Query:    65 LGFGPEQS--HFVVELTYNYGVTS-----YDIGT-----GFGHFAIATEDVYKLVENIRA 112
             L  G E+S    ++ELTYN+G        Y  G      GFGH     +++      + +
Sbjct:    61 LNHGVERSKREGILELTYNFGTEKKEGPVYINGNTEPKRGFGHICFTVDNIESACAYLES 120

Query:   113 KGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQV--------MLRVGDL 164
             KG +  ++     G   HIAF  DPD Y  EL+ +  T +P   +        M+RV D 
Sbjct:   121 KGVSFKKKLSD--GKMKHIAFALDPDNYWIELVSQSET-KPKANISNFRFNHTMVRVKDP 177

Query:   165 GRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE----DQTTVLELTYNYGVTEYTKG 220
               SI FYEK LGMK++   D P  K+T   L Y  +    D+  +LELT+N+G TE   G
Sbjct:   178 EPSIAFYEK-LGMKVIDKADHPNGKFTNYFLAYPSDLPRHDREGLLELTHNWG-TEKESG 235

Query:   221 NAY 223
               Y
Sbjct:   236 PVY 238

GO:0004462 "lactoylglutathione lyase activity" evidence=IGI;IDA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006749 "glutathione metabolic process" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

GO:0071470 "cellular response to osmotic stress" evidence=TAS

RGD|1307010 Glod4 "glyoxalase domain containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 82/275 (29%), Positives = 129/275 (46%)

Query:    22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPE 70
             RR LH V++VG+  +T+ F+ +  GM++LR  +  E            K+S   +GFGPE
Sbjct:     4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 63

Query:    71 QSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTH 130
               HFV ELTYNYG+  Y +G  F    +A+      V N R       R   PL      
Sbjct:    64 DDHFVAELTYNYGIGDYKLGNDFMGLTLASSQA---VSNAR-------RLEWPLSKVAEG 113

Query:   131 IAFVKDPDGYIFELIQRGPTP-EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK 189
             +   + P GY F L  R P+  +P+ +V L V DL +S+ ++   LGMK+    D+ E K
Sbjct:   114 VFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQ-DE-EKK 171

Query:   190 YTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG 249
             +  A+LGYA+ DQ   LEL    G  +++        +    ++    +++   +Q +  
Sbjct:   172 W--ALLGYAD-DQCK-LELQGIQGAVDHSAAFGRIAFSCPQKELPDLEDLMKRESQSILT 227

Query:   250 KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF 284
              +     P      ++    DPDG +   V +E F
Sbjct:   228 PLVSLDTPGKA-TVQVVILADPDGHEICFVGDEAF 261

GO:0005739 "mitochondrion" evidence=IEA;ISO

UNIPROTKB|Q9HC38 GLOD4 "Glyoxalase domain-containing protein 4" [Homo sapiens (taxid:9606)]

 Score = 207 (77.9 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
 Identities = 67/227 (29%), Positives = 100/227 (44%)

Query:    59 KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVT 118
             K+S   +GFGPE  HFV ELTYNYGV  Y +G  F    +A+      V N R       
Sbjct:    67 KWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQA---VSNAR------- 116

Query:   119 REPGPLKGGTTHIAFVKDPDGYIFELIQRG-PTPEPLCQVMLRVGDLGRSIKFYEKALGM 177
             +   PL      +   + P GY F L  R  P  +P+ +V L V DL +S+ ++   LGM
Sbjct:   117 KLEWPLTEVAEGVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGM 176

Query:   178 KLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA 237
             K+    +K E K   A+LGYA  D    LEL    G  ++         +    ++    
Sbjct:   177 KIY---EKDEEKQR-ALLGYA--DNQCKLELQGVKGGVDHAAAFGRIAFSCPQKELPDLE 230

Query:   238 EVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF 284
             +++    Q++   +     P      ++    DPDG +   V +E F
Sbjct:   231 DLMKRENQKILTPLVSLDTPGKA-TVQVVILADPDGHEICFVGDEAF 276

GO:0005739 "mitochondrion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8W593	LGUC_ARATH	4, ., 4, ., 1, ., 5	0.7291	0.9759	0.8114	no	no
Q5I0D1	GLOD4_RAT	No assigned EC number	0.3024	0.8247	0.8053	yes	no
Q39366	LGUL_BRAOG	4, ., 4, ., 1, ., 5	0.8191	0.9656	0.9964	N/A	no
Q948T6	LGUL_ORYSJ	4, ., 4, ., 1, ., 5	0.8041	0.9931	0.9931	yes	no
Q09751	LGUL_SCHPO	4, ., 4, ., 1, ., 5	0.3209	0.8350	0.8046	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.4.1	LOW CONFIDENCE prediction!
4th Layer	4.4.1.5	0.979

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00010980001	SubName- Full=Chromosome chr10 scaffold_297, whole genome shotgun sequence; (292 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00029246001	SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (258 aa)						•	•		0.924
	GSVIVG00038137001	SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (483 aa)						•			0.800
	GSVIVG00027369001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (458 aa)						•			0.800
	GSVIVG00023836001	SubName- Full=Chromosome chr7 scaffold_31, whole genome shotgun sequence; (316 aa)						•			0.800
	GSVIVG00016002001	SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (703 aa)						•			0.800
	GSVIVG00009475001	SubName- Full=Chromosome undetermined scaffold_235, whole genome shotgun sequence; (770 aa)						•			0.800
	GSVIVG00006903001	SubName- Full=Chromosome chr10 scaffold_179, whole genome shotgun sequence; (407 aa)						•			0.800
	GSVIVG00000550001	SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (476 aa)						•			0.800

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	291
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	0.0
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	2e-84
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	7e-57
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	2e-46
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	2e-45
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	5e-37
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	1e-35
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	1e-27
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	7e-27
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	7e-19
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	3e-18
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	4e-17
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	2e-16
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	3e-16
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	1e-14
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	1e-13
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	1e-12
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	2e-11
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	3e-10
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	1e-09
cd08362	120	cd08362, BphC5-RrK37_N_like, N-terminal, non-catal	1e-08
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	3e-08
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	4e-08
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	5e-08
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	1e-07
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	2e-06
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	4e-06
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	4e-06
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	5e-06
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	1e-05
cd08348	134	cd08348, BphC2-C3-RGP6_C_like, The single-domain 2	2e-05
TIGR02295	294	TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-di	2e-05
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	3e-05
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	4e-05
cd07263	120	cd07263, Glo_EDI_BRP_like_16, This conserved domai	4e-05
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	1e-04
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	2e-04
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	2e-04
cd08343	131	cd08343, ED_TypeI_classII_C, C-terminal domain of	2e-04
cd08349	112	cd08349, BLMA_like, Bleomycin binding protein (BLM	2e-04
cd08345	113	cd08345, Fosfomycin_RP, Fosfomycin resistant prote	2e-04
cd07251	120	cd07251, Glo_EDI_BRP_like_10, This conserved domai	2e-04
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	6e-04
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	8e-04
pfam13468	174	pfam13468, Glyoxalase_3, Glyoxalase-like domain	8e-04
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	0.001
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	0.001

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  557 bits (1437), Expect = 0.0
 Identities = 230/289 (79%), Positives = 251/289 (86%), Gaps = 4/289 (1%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
            A AS AA   +LLEWPKKDKRR LH VYRVGDLDRTIKFYTEC GMKLLRKRD+PEEKY
Sbjct: 2   SAAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY 61

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           +NAFLG+GPE S+FVVELTYNYGV  YDIGTGFGHF IA EDV K VE ++AKGG VTRE
Sbjct: 62  TNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTRE 121

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG + IAFVKDPDGY FELIQRGPTPEPLCQVMLRVGDL RSIKFYEKA GMKLL
Sbjct: 122 PGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAFGMKLL 181

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           R  D PEYKYT+AM+GY  ED+TTVLELTYNYGVTEYTKGNAYAQ+AI TDDVYK+AE +
Sbjct: 182 RKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAI 241

Query: 241 NLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ 289
            LV    GGKITR+PGP+PG+NTKIT+ +DPDGWKTV VDN DFLKEL+
Sbjct: 242 KLV----GGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE 286

Length = 286

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  249 bits (637), Expect = 2e-84
 Identities = 91/149 (61%), Positives = 109/149 (73%)

Query: 8   AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF 67
           A + +L+  PK  KRR LH + RVGDLD+++ FYTE  GMKLLRKRD PE K+S AFLG+
Sbjct: 2   AESGDLVADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGY 61

Query: 68  GPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGG 127
           G E S  V+ELT+N+G   YD+G GFGH AI  +DVYK  E +RA GGNV REPGP+KGG
Sbjct: 62  GDETSAAVIELTHNWGTEKYDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGG 121

Query: 128 TTHIAFVKDPDGYIFELIQRGPTPEPLCQ 156
           TT IAFV+DPDGY  ELIQR  T + L  
Sbjct: 122 TTVIAFVEDPDGYKIELIQRKSTKDGLGN 150

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  178 bits (454), Expect = 7e-57
 Identities = 64/123 (52%), Positives = 81/123 (65%), Gaps = 3/123 (2%)

Query: 24  FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG 83
           FLH + RV DL++++ FYT+  GMKLLR++D PE K++  FLG+  E S  V+ELTYN+G
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG 60

Query: 84  VT-SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
               YD G GFGH A A +DVY   E +   G  VT+ PG   GG   IAF+KDPDGY  
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGD--GGMKGIAFIKDPDGYWI 118

Query: 143 ELI 145
           ELI
Sbjct: 119 ELI 121

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  152 bits (384), Expect = 2e-46
 Identities = 70/117 (59%), Positives = 87/117 (74%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
           RVGDL R+I FYT   GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+GV  Y++
Sbjct: 3   RVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYEL 62

Query: 90  GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ 146
           GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  ELI+
Sbjct: 63  GTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 119

Length = 129

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  150 bits (380), Expect = 2e-45
 Identities = 62/130 (47%), Positives = 82/130 (63%), Gaps = 4/130 (3%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 213
           L   MLRVGDL +S+ FY + LGMKLLR  D PE K++LA LGY +E    V+ELT+N+G
Sbjct: 18  LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWG 77

Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
             +Y  GN +  +AI  DDVYK+ E V    + LGG + R+PGP+ G  T I    DPDG
Sbjct: 78  TEKYDLGNGFGHIAIGVDDVYKACERV----RALGGNVVREPGPVKGGTTVIAFVEDPDG 133

Query: 274 WKTVLVDNED 283
           +K  L+  + 
Sbjct: 134 YKIELIQRKS 143

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  127 bits (321), Expect = 5e-37
 Identities = 62/126 (49%), Positives = 84/126 (66%), Gaps = 4/126 (3%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY 217
           MLRVGDL RSI FY   LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKY 60

Query: 218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTV 277
             G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I    DPDG+K  
Sbjct: 61  ELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 116

Query: 278 LVDNED 283
           L++ +D
Sbjct: 117 LIEEKD 122

Length = 129

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  124 bits (313), Expect = 1e-35
 Identities = 56/120 (46%), Positives = 73/120 (60%), Gaps = 9/120 (7%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
             MLRV DL +S+ FY   LGMKLLR  D PE K+TL  LGY +ED   VLELTYN+G  
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTE 62

Query: 216 E-YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPDG 273
           E Y  GN +  +A + DDVY + E +    +E+G ++T+ PG       K  +F+ DPDG
Sbjct: 63  EPYDNGNGFGHLAFAVDDVYAACERL----EEMGVEVTKPPGD---GGMKGIAFIKDPDG 115

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score =  103 bits (258), Expect = 1e-27
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 8/125 (6%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R  H   RVGDL++++ FYT+  G KL+ + D  E    +AF          V+EL  N 
Sbjct: 1   RIDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFF----TAGGRVLELLLNE 56

Query: 83  GVTSYDIGT---GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
                  G         A + +DV    + ++A G  + REPG    G    ++ +DPDG
Sbjct: 57  TPPPAAAGFGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGR-YSYFRDPDG 115

Query: 140 YIFEL 144
            + EL
Sbjct: 116 NLIEL 120

Length = 120

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  101 bits (253), Expect = 7e-27
 Identities = 52/137 (37%), Positives = 70/137 (51%), Gaps = 21/137 (15%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----------EKYSNAFLGFGPE 70
           RR LH V++VG+ ++TIKFY E  GMK+LR  +  E            K+S   +G+GPE
Sbjct: 1   RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPE 60

Query: 71  QSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTH 130
             HFVVELTYNYG+  Y++G  F    I ++          AK  N      P+      
Sbjct: 61  DDHFVVELTYNYGIGDYELGNDFLGITIHSKQAVS-----NAKKHNW-----PVTEVEDG 110

Query: 131 IAFVKDPDGYIFELIQR 147
           +  VK P GY F LI +
Sbjct: 111 VYEVKAPGGYKFYLIDK 127

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 79.8 bits (197), Expect = 7e-19
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DL+  + FY +  G ++L +     E    AFL  G       +EL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLG----GTRLEL-FEGDEP 52

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
           +   G G  H A   +DV   VE ++A G  +   P     G   +A+ +DPDG + EL
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGR-VAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 80.2 bits (198), Expect = 3e-18
 Identities = 59/176 (33%), Positives = 86/176 (48%), Gaps = 35/176 (19%)

Query: 1   MAEASP--AAANAELLEWPKKDKRRFL--HAVYRVGDLDRTIKFYTECFGMKLLRKRDVP 56
           MA AS   AA N  L   P +  + ++    ++R+ D   ++ FY+   GM LL++ D P
Sbjct: 1   MASASKESAANNPGLCGNPDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFP 60

Query: 57  EEKYSNAFLGF---------GPEQSHFV------VELTYNYGVTS------YDIG----T 91
           E K+S  FLG+          PE++ +       +ELT+N+G  S      Y  G     
Sbjct: 61  EMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPR 120

Query: 92  GFGHFAIATEDVYKLVENIRAKGGNVTREP--GPLKGGTTHIAFVKDPDGYIFELI 145
           GFGH  I  +DVYK  E     G    ++P  G +KG    +AF+KDPDGY  E+ 
Sbjct: 121 GFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKG----LAFIKDPDGYWIEIF 172

Length = 185

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 78.1 bits (192), Expect = 4e-17
 Identities = 54/153 (35%), Positives = 73/153 (47%), Gaps = 34/153 (22%)

Query: 28  VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS--------------- 72
           +YR+ D   ++ FY+   GM LL++ D PE K+S  F+G+    S               
Sbjct: 80  MYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQ 139

Query: 73  HFVVELTYNYGVTS------YDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP- 121
              +ELT+N+G  S      Y  G     GFGH  I  +DVYK  E     G    ++P 
Sbjct: 140 KATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPN 199

Query: 122 -GPLKGGTTHIAFVKDPDGY---IFELIQRGPT 150
            G +KG    IAF+KDPDGY   IF+L   G T
Sbjct: 200 DGKMKG----IAFIKDPDGYWIEIFDLKTIGTT 228

Length = 233

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 73.9 bits (182), Expect = 2e-16
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 27/134 (20%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLR----------TVDKP-EYKYTLAMLGYAEEDQTTVLE 207
            +VG+  ++IKFY + LGMK+LR            + P + K++  M+GY  ED   V+E
Sbjct: 8   FKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVE 67

Query: 208 LTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN-LVTQELGGKITRQPGPIPGLNTKIT 266
           LTYNYG+ +Y  GN +  + I +     +A+  N  VT+   G    +            
Sbjct: 68  LTYNYGIGDYELGNDFLGITIHSKQAVSNAKKHNWPVTEVEDGVYEVK------------ 115

Query: 267 SFVDPDGWKTVLVD 280
               P G+K  L+D
Sbjct: 116 ---APGGYKFYLID 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 73.2 bits (180), Expect = 3e-16
 Identities = 40/123 (32%), Positives = 53/123 (43%), Gaps = 12/123 (9%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
            V LRVGDL +S+ FY   LG KL+  VD  E     A           VLEL  N    
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFF----TAGGRVLELLLNETPP 59

Query: 216 EY---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 272
                  G+  A +A S DDV  + + +    +  G +I R+PG       + + F DPD
Sbjct: 60  PAAAGFGGHHIAFIAFSVDDVDAAYDRL----KAAGVEIVREPGRHGW-GGRYSYFRDPD 114

Query: 273 GWK 275
           G  
Sbjct: 115 GNL 117

Length = 120

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 70.2 bits (172), Expect = 1e-14
 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 43/150 (28%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTV---------- 205
           Q M R+ D   S+ FY + LGM LL+ +D PE K++L  LGY  ED  T           
Sbjct: 30  QTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY--EDSETAPTDPPERTVW 87

Query: 206 -------LELTYNYGVTE-------YTKGNA----YAQVAISTDDVYKSAEVVNLVTQEL 247
                  +ELT+N+G TE       Y  GN+    +  + I+ DDVYK+ E      ++L
Sbjct: 88  TFGRKATIELTHNWG-TESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERF----EKL 142

Query: 248 GGKITRQP--GPIPGLNTKITSFV-DPDGW 274
           G +  ++P  G + GL     +F+ DPDG+
Sbjct: 143 GVEFVKKPDDGKMKGL-----AFIKDPDGY 167

Length = 185

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 65.5 bits (160), Expect = 1e-13
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
            V DL+    FY E  G ++    +  + +Y+   LG       F+  +           
Sbjct: 2   PVSDLEAARAFYEELLGFEV----EEEDGEYAEFRLGLVLALGGFIELIGLP---EPDAP 54

Query: 90  GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
           G G  H     +D+  LV  ++A GG +   P     G     +V+DPDG + ELI
Sbjct: 55  GGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWG-GREFYVRDPDGNLIELI 109

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 65.8 bits (160), Expect = 1e-12
 Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 39/148 (26%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE--------------- 200
           Q M R+ D   S+ FY + LGM LL+ +D PE K++L  +GY +                
Sbjct: 78  QTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTF 137

Query: 201 DQTTVLELTYNYGVTE-------YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGG 249
            Q   +ELT+N+G TE       Y  GN+    +  + I+ DDVYK+ E      +ELG 
Sbjct: 138 GQKATIELTHNWG-TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF----EELGV 192

Query: 250 KITRQP--GPIPGLNTKITSFV-DPDGW 274
           +  ++P  G + G+     +F+ DPDG+
Sbjct: 193 EFVKKPNDGKMKGI-----AFIKDPDGY 215

Length = 233

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 60.2 bits (145), Expect = 2e-11
 Identities = 27/141 (19%), Positives = 43/141 (30%), Gaps = 19/141 (13%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFG-----------PE 70
               H    V DL+ +I FYT+  G++L++      +      L F              
Sbjct: 1   MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFF 60

Query: 71  QSHFVVELTYNYGV-TSYDIGT-GFGHFAIATED---VYKLVENIRAKGGNVTREPGPLK 125
                    +   V      G  G GH A   +D       +  +   G  +        
Sbjct: 61  GFEGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRG 120

Query: 126 GGTTHIAFVKDPDGYIFELIQ 146
           G      + +DPDG + EL  
Sbjct: 121 G---VHVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 56.3 bits (136), Expect = 3e-10
 Identities = 32/118 (27%), Positives = 42/118 (35%), Gaps = 13/118 (11%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
            V L V DL  ++ FYE  LG ++L            A L        T LEL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLGG----TRLEL-FEGDEP 52

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
               G     +A   DDV  + E +    +  G +I   P   P        F DPDG
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERL----KAAGVEILGGPREEPWGGRVAY-FRDPDG 105

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 9/116 (7%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS-HFVVELTYNYGVTSYD 88
           RV DL+ +  FYT+  G   L +   P   +  A+L  G     H + E   +      +
Sbjct: 7   RVPDLEASRAFYTDVLG---LEEGPRPPFLFPGAWLYAGDGPQLHLIEEDPPD---ALPE 60

Query: 89  IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
                 H A   +D+      ++A G   T    P   G   + FV+DPDG   EL
Sbjct: 61  GPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPG-DGVRQL-FVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|176710 cd08362, BphC5-RrK37_N_like, N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

 Score = 52.0 bits (125), Expect = 1e-08
 Identities = 33/123 (26%), Positives = 44/123 (35%), Gaps = 16/123 (13%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
                V DL     FY E +G+       V  E     +L       H ++ L       
Sbjct: 6   GVGLGVPDLAAAAAFYREVWGL------SVVAEDDGIVYLR-ATGSEHHILRLR-----R 53

Query: 86  SYDIGTGFGHFAIAT-EDVYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIF 142
           S         F++A+  DV  L   + A+GG V  EPG     GG     F  DPDG + 
Sbjct: 54  SDRNRLDVVSFSVASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFF-DPDGRLI 112

Query: 143 ELI 145
           E  
Sbjct: 113 EFS 115

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxygenases are activated by Fe(II). Length = 120

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 50.8 bits (122), Expect = 3e-08
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 27/131 (20%)

Query: 27  AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS 86
           A+Y V DL+    FY +  G++L+ K D        AF   G       + L ++ G TS
Sbjct: 5   ALY-VDDLEAAEAFYEDVLGLELMLKED-----RRLAFFWVGGRG----MLLLFDPGATS 54

Query: 87  YDIGTGFGH---------FAIATEDVYKLVENIRAKGGNV---TREPGPLKGGTTHIAFV 134
              G    H         FAI  E++ +   ++ AKG  +    + P     G   + F 
Sbjct: 55  TPGGEIPPHGGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWP----RGGRSLYF- 109

Query: 135 KDPDGYIFELI 145
           +DPDG + EL 
Sbjct: 110 RDPDGNLLELA 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 50.1 bits (120), Expect = 4e-08
 Identities = 26/115 (22%), Positives = 40/115 (34%), Gaps = 12/115 (10%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYT 218
           L V DL  +  FYE+ LG      V++ + +Y    LG        +  +          
Sbjct: 1   LPVSDLEAARAFYEELLGF----EVEEEDGEYAEFRLGLVLALGGFIELIGLP---EPDA 53

Query: 219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
            G     +    DD+     +V  + +  GG I   P   P    +     DPDG
Sbjct: 54  PGGGGVHLYFEVDDL---DALVARL-KAAGGTILEPPEDTPW-GGREFYVRDPDG 103

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 50.2 bits (121), Expect = 5e-08
 Identities = 34/135 (25%), Positives = 53/135 (39%), Gaps = 23/135 (17%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLL-RKRDVPEEKYSNAFLGFGP----------EQSHF 74
           H    V DL+  +KFY +  G+    R+    E+    AFLG G           + S  
Sbjct: 3   HIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLGNVQIELIEPLDDDSPI 62

Query: 75  VVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVT-REPGPLKGGTTHIAF 133
              L           G G  H A   +D+   +  ++A+G  +    P    GG   +AF
Sbjct: 63  AKFLEKR--------GEGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGG-KRVAF 113

Query: 134 V--KDPDGYIFELIQ 146
           +  KD  G + EL++
Sbjct: 114 LHPKDTGGVLIELVE 128

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 4/128 (3%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R  H    V DL+   KFY +  G ++    ++PE+     F+  G  +   +  L  + 
Sbjct: 1   RIDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDS 60

Query: 83  GVTSY--DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFV--KDPD 138
            +  +    G G  H AI  +D+   +E ++ KG  +  E   +      +AF+  K   
Sbjct: 61  PIAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGAHGKPVAFLHPKSTG 120

Query: 139 GYIFELIQ 146
           G + EL Q
Sbjct: 121 GVLIELEQ 128

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 45.6 bits (109), Expect = 2e-06
 Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 23/125 (18%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R      RV DL+R++ FY +  G+++L + D      S A LG G ++   V+E   + 
Sbjct: 2   RIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDA 55

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTR----EPGPLKGGTTHI---AF-V 134
                   TG  HFAI       L+ + RA      R       PL+G + H+   A  +
Sbjct: 56  PPAPPG-TTGLYHFAI-------LLPS-RADLARALRRLIELGIPLEGASDHLVSEALYL 106

Query: 135 KDPDG 139
            DP+G
Sbjct: 107 SDPEG 111

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 45.5 bits (107), Expect = 4e-06
 Identities = 26/131 (19%), Positives = 39/131 (29%), Gaps = 17/131 (12%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY--- 212
            V L V DL  SI FY   LG++L++             L + + D      L +     
Sbjct: 5   HVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEG 64

Query: 213 ----------GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLN 262
                      +           +A   DD       +  +  + G +I        G  
Sbjct: 65  RAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPD-GVRIELGEPGRGG-- 121

Query: 263 TKITSFVDPDG 273
                F DPDG
Sbjct: 122 -VHVYFRDPDG 131

Length = 138

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 44.9 bits (107), Expect = 4e-06
 Identities = 27/121 (22%), Positives = 36/121 (29%), Gaps = 19/121 (15%)

Query: 31  VGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY-----GVT 85
             D +R   FY   FG             Y  A    G      +++          G  
Sbjct: 8   TTDPERAKAFYGAVFGWTF-EDMGDGGGDY--AVFSTGGGAVGGLMKAPEPAAGSPPGWL 64

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
            Y           A +DV      + A GG V   P  +  G    A   DP+G +F L 
Sbjct: 65  VY----------FAVDDVDAAAARVEAAGGKVLVPPTDI-PGVGRFAVFADPEGAVFGLW 113

Query: 146 Q 146
           Q
Sbjct: 114 Q 114

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 45.0 bits (107), Expect = 5e-06
 Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 9/126 (7%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DL+R+  FY    G+    +    E+  S      G   ++ V++        
Sbjct: 4   HVELTVRDLERSRAFYDWLLGLLGFEEVKEWEDGRSWRAGDGG---TYLVLQQADGESAG 60

Query: 86  SYDI-GTGFGHFAI---ATEDVYKLVENIRAKGGNVTREPG--PLKGGTTHIAFVKDPDG 139
            +D    G  H A    + E V +L   +  +G  +   P      G   +  F +DPDG
Sbjct: 61  RHDRRNPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDG 120

Query: 140 YIFELI 145
              EL+
Sbjct: 121 IRLELV 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 20/119 (16%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-- 216
           L V DL R+  FYEK  G       D  E +Y +     A+             G     
Sbjct: 15  LPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVF---PADGAGAG--------GGLMAR 63

Query: 217 --YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                G     +  + DD+  + E V       GGK+ R     PG    I  FVDP+G
Sbjct: 64  PGSPPGGGGWVIYFAVDDIDATLERV----VAAGGKVLRPKTEFPGGGR-IAHFVDPEG 117

Length = 127

>gnl|CDD|176696 cd08348, BphC2-C3-RGP6_C_like, The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 33/147 (22%), Positives = 49/147 (33%), Gaps = 22/147 (14%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNA-----FLGFGPEQSHFVVE 77
           R  H V  V DL+  ++FY +  G                      FL   P++ H +  
Sbjct: 1   RLSHVVLYVRDLEAMVRFYRDVLGFT---------VTDRGPLGGLVFLSRDPDEHHQIAL 51

Query: 78  LTYNYGVTSYDIGTGFGHFAIATEDVYKLVEN---IRAKGGNVTREPGPLKGGTTHIAFV 134
           +T            G  H A   + +  L +    +RA G  +T    P+  G     + 
Sbjct: 52  ITGRPAAPPPG-PAGLNHIAFEVDSLDDLRDLYERLRAAG--IT-PVWPVDHGNAWSIYF 107

Query: 135 KDPDGYIFELIQRGP-TPEPLCQVMLR 160
           +DPDG   EL    P         ML 
Sbjct: 108 RDPDGNRLELFVDTPWYVAQAAAFMLD 134

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, which form hexamers. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, its two domains do not belong to this subfamily. Length = 134

>gnl|CDD|213698 TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-dioxygenase

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 41/173 (23%), Positives = 63/173 (36%), Gaps = 30/173 (17%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFL-GFGPEQSHFVVELTYN 81
           R  H   RV DLD++ +FY +  G +        E      +L G    Q H +V     
Sbjct: 4   RTGHVELRVTDLDKSREFYVDLLGFR------ETESDKEYIYLRGIEEFQHHSLVLTKAP 57

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
               SY      G      ED+ K  +  +  G  V       +        V+DP GY 
Sbjct: 58  SAALSY-----IGFRVSKEEDLDKAADFFQKLGHPVRLVRDGGQPEALR---VEDPFGYP 109

Query: 142 FEL---------------IQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
            E                  RG +P  L    + V D+ R+++FY++ LG ++
Sbjct: 110 IEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFVPDVQRALRFYKEELGFRV 162

This enzyme catalyzes the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. The substrate, 3,4-dihydroxyphenylacetate (homoprotocatechuate) arises from the action of a hydroxylase on 4-hydroxyphenylacetate. The aromatic ring is opened by this dioxygenase exo to the 3,4-diol resulting in 2-hydroxy-5-carboxymethylmuconate semialdehyde. The enzyme from Bacillus brevis contains manganese. Length = 294

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.2 bits (100), Expect = 3e-05
 Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 8/126 (6%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +R  H V  V D++ T+ FYT   GM+++R  +    + +   L FG ++ +    +   
Sbjct: 2   KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGE-EVGRKA---LRFGSQKINL-HPVGGE 56

Query: 82  YGVTSYDIGTGFGHFAIATEDVYK-LVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPD 138
           +   +   G G     + TE     LV ++ A G  +   P P  G  G     + +DPD
Sbjct: 57  FEPAAGSPGPGSDDLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPD 116

Query: 139 GYIFEL 144
           G + EL
Sbjct: 117 GNLIEL 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 41.8 bits (99), Expect = 4e-05
 Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 17/130 (13%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRK---RDVPEEK---YSNAFLGFGPEQSHFVVELT 79
           H      D   T+ FYT+  G++L++K   +D P      + +     G   + F     
Sbjct: 4   HVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDA 63

Query: 80  YNYGVTSYDIGTG-FGH--FAIATED-VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVK 135
              G      G G   H  F++ +E  +    E +RA G  V+   G +        + +
Sbjct: 64  GPKGRR----GPGQIHHIAFSVPSEASLEAWRERLRAAGVPVS---GVVDRFGERSLYFE 116

Query: 136 DPDGYIFELI 145
           DPDG   EL 
Sbjct: 117 DPDGIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|211353 cd07263, Glo_EDI_BRP_like_16, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 41.8 bits (99), Expect = 4e-05
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 15/128 (11%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-EEKYSNAFLGFGP---EQSHFVVELTYN 81
                V D D+ + FYTE  G ++  + DVP    +   ++   P    ++  V  L   
Sbjct: 1   LVSLYVDDQDKALAFYTEKLGFEV--REDVPMGGGFR--WVTVAPPGSPETSLV--LAPP 54

Query: 82  YGVTSYDIGT---GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
               +   G    G     + T+D+    E ++A+G   T EP  +  GT  +A  +DPD
Sbjct: 55  ANPAAMASGLQPGGTPGLVLVTDDIDATYEELKARGVEFTEEPREMPYGT--VAVFRDPD 112

Query: 139 GYIFELIQ 146
           G +F L+Q
Sbjct: 113 GNLFVLVQ 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 25/110 (22%), Positives = 37/110 (33%), Gaps = 3/110 (2%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DLD    F+ +  G+          +    AF   G +     VEL       
Sbjct: 2   HIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLG-DGPAVEVELIQPLDGE 60

Query: 86  SYDI--GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF 133
           S+    G G  H A   +D+   V  + A+G  V  +          +AF
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 24/115 (20%), Positives = 37/115 (32%), Gaps = 13/115 (11%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYT 218
           L   D  R+  FY    G      +      Y   +          +++           
Sbjct: 6   LPTTDPERAKAFYGAVFGWT-FEDMGDGGGDYA--VFSTGGGAVGGLMKAP-----EPAA 57

Query: 219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                  V  + DDV  +A  V    +  GGK+   P  IPG+  +   F DP+G
Sbjct: 58  GSPPGWLVYFAVDDVDAAAARV----EAAGGKVLVPPTDIPGV-GRFAVFADPEG 107

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 31/123 (25%), Positives = 42/123 (34%), Gaps = 20/123 (16%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAF------LGFGPEQSHFVVELTYNYG 83
            V DL+R   FY + FG       D+ E +Y+          G    +           G
Sbjct: 16  PVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADGAGAGGGLMARPGSPPGGG---G 72

Query: 84  VTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFE 143
              Y           A +D+   +E + A GG V R      GG     FV DP+G  F 
Sbjct: 73  WVIY----------FAVDDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFV-DPEGNRFG 121

Query: 144 LIQ 146
           L  
Sbjct: 122 LWS 124

Length = 127

>gnl|CDD|211355 cd08343, ED_TypeI_classII_C, C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 16/124 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H V R  D+  T  FYT+  G + +  R       + A+L    ++ H +        + 
Sbjct: 2   HVVLRTPDVAATRAFYTDVLGFR-VSDRVGDPGVLAAAWLRCD-DEHHDL-------ALF 52

Query: 86  SYDIGTGFGHFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VKDPDGY 140
               G G  H A   E   D+ +  + + A G  +  E GP + G  +  F   +DPDG 
Sbjct: 53  PGPEGPGLHHVAFEVESLDDIKRAGDRLAANG--IQIEWGPGRHGPGNNLFLYFRDPDGN 110

Query: 141 IFEL 144
             EL
Sbjct: 111 RIEL 114

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are type I, class II enzymes, and are composed of the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. A catalytically essential metal, Fe(II) or Mn(II), presents in all the enzymes in this family. Length = 131

>gnl|CDD|211357 cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 11/115 (9%)

Query: 28  VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY 87
           V  V D+++++ FY +  G ++  +   PE  Y  A +     Q H              
Sbjct: 3   VLPVSDIEKSLAFYRDVLGFEVDFEH--PEPLY--AQVSRDGAQLHL--SEHDGDEWVPL 56

Query: 88  DIGTGFGHFAIATEDVYKLVENIRAKG-GNVTREPGPLKGGTTHIAFVKDPDGYI 141
             G       I  +DV  L   ++AKG   +   P     G    A V+DPDG +
Sbjct: 57  GRGGN---VYIEVDDVDALYAELKAKGAKLIVYPPEDQPWGQREFA-VQDPDGNL 107

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the larger superfamily, this family contains members with or without domain swapping. Length = 112

>gnl|CDD|176693 cd08345, Fosfomycin_RP, Fosfomycin resistant protein; inhibits the biological function of fosfomycin

 Score = 39.5 bits (92), Expect = 2e-04
 Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 17/122 (13%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY---SNAFLGFGPEQSHFVVELTYNY 82
           H    V DL+++I FY +  G +L+      +E Y   +  ++    E S    E TY +
Sbjct: 1   HITLIVKDLNKSIAFYRDILGAELIYSSS--KEAYFELAGLWICLMEEDSLQGPERTYTH 58

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
                        F I +E+  +  E ++A G  +  E   ++G    I F  DPDG++ 
Sbjct: 59  IA-----------FQIQSEEFDEYTERLKALGVEMKPERPRVQGEGRSIYFY-DPDGHLL 106

Query: 143 EL 144
           EL
Sbjct: 107 EL 108

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 113

>gnl|CDD|211351 cd07251, Glo_EDI_BRP_like_10, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 22/124 (17%)

Query: 31  VGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIG 90
           V DL R+  FY    G K     D  +     AF   G      V+ L +     + D G
Sbjct: 6   VADLARSRAFYRA-GGWK--TSADSNDGV---AFFQLG----GLVLAL-FPREELAKDAG 54

Query: 91  -----TGFGHFAIA-----TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
                 GF    +A      ++V  ++    A G  + + P  +  G     +  DPDG+
Sbjct: 55  VPVPPPGFSGITLAHNVRSEDEVDAVLARAAAAGATIVKPPQKVFWGGYS-GYFADPDGH 113

Query: 141 IFEL 144
           ++E+
Sbjct: 114 LWEV 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 38.7 bits (91), Expect = 6e-04
 Identities = 30/130 (23%), Positives = 42/130 (32%), Gaps = 26/130 (20%)

Query: 157 VMLRVGDLGRSIKFYEKA---LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 213
           V L V DL R+  FY+     LG+K +        +     +GY +        +T  + 
Sbjct: 4   VTLGVNDLERARAFYDAVLAPLGIKRV-------MEDGPGAVGYGKGGGGPDFWVTKPFD 56

Query: 214 VTEYTKGNAYAQVAISTDD------VYKSAEVVNLVTQELGGKITRQPGPIPGLNTK--I 265
               T GN    VA +          + +A          GG     PG  P        
Sbjct: 57  GEPATAGNG-THVAFAAPSREAVDAFHAAA-------LAAGGTDEGAPGLRPHYGPGYYA 108

Query: 266 TSFVDPDGWK 275
               DPDG K
Sbjct: 109 AYVRDPDGNK 118

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 38.3 bits (90), Expect = 8e-04
 Identities = 31/126 (24%), Positives = 43/126 (34%), Gaps = 18/126 (14%)

Query: 24  FLHAVYRVGDLDRTIKFYTECF---GMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
             H    V DL+R   FY       G+K +        +     +G+G         +T 
Sbjct: 1   IDHVTLGVNDLERARAFYDAVLAPLGIKRVM-------EDGPGAVGYGKGGGGPDFWVTK 53

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAK----GGNVTREPG--PLKGGTTHIAFV 134
            +       G G  H A A       V+   A     GG     PG  P  G   + A+V
Sbjct: 54  PFDGEPATAGNGT-HVAFAAPSREA-VDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYV 111

Query: 135 KDPDGY 140
           +DPDG 
Sbjct: 112 RDPDGN 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|222152 pfam13468, Glyoxalase_3, Glyoxalase-like domain

 Score = 39.2 bits (92), Expect = 8e-04
 Identities = 35/150 (23%), Positives = 50/150 (33%), Gaps = 31/150 (20%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFG----------PEQS--- 72
           H V  V DLD  +  + +  G  L      P     NA L FG          PE     
Sbjct: 3   HLVVAVPDLDEAVARFEDRLGFTLTPGGRHPGMGTHNALLYFGDGYLELLAIDPEAPAPD 62

Query: 73  ---HFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGT- 128
               F ++            G G   +A+ T+D+  +   +RA G +         GG  
Sbjct: 63  GGRWFGLDRL--------AGGPGLSGWALRTDDIDAVAARLRAAGLDFGG-RVRPDGGDL 113

Query: 129 -THIAFVKDPD---GYIF-ELIQRGPTPEP 153
              +A   D D   G +   LIQ G +   
Sbjct: 114 RWRLAVPADGDLPAGGLLPFLIQWGTSHPA 143

This domain is related to the Glyoxalase domain pfam00903. Length = 174

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 37.9 bits (89), Expect = 0.001
 Identities = 13/26 (50%), Positives = 18/26 (69%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLR 181
            V LRV DL RS+ FY+  LG+++L 
Sbjct: 5   AVTLRVADLERSLAFYQDVLGLEVLE 30

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 9/118 (7%)

Query: 33  DLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY--NYGV-TSYDI 89
           D  R+ +FY E  G+ L+R+   PE K     L    E     +EL    N     SY  
Sbjct: 13  DYARSKEFYVEVLGLTLIRETYRPERKSYKLDLALNGEY---QIELFSFPNPPPRPSYPE 69

Query: 90  GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGT-THIAFVKDPDGYIFELIQ 146
             G  H A A ED+   V  ++A G  V  EP  +   T     F  DPDG   EL +
Sbjct: 70  ACGLRHLAFAVEDIEAAVAELKAHG--VEVEPIRVDEFTGKRFTFFYDPDGLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	291
PLN02300	286	lactoylglutathione lyase	100.0
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	100.0
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	100.0
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	100.0
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.97
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.91
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.88
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.86
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.85
PLN02367	233	lactoylglutathione lyase	99.84
PRK10291	129	glyoxalase I; Provisional	99.83
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.83
PLN02367	233	lactoylglutathione lyase	99.82
PRK10291	129	glyoxalase I; Provisional	99.82
PLN03042	185	Lactoylglutathione lyase; Provisional	99.81
PRK11478	129	putative lyase; Provisional	99.81
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.8
PLN03042	185	Lactoylglutathione lyase; Provisional	99.8
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.78
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.78
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.78
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.78
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	99.78
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.77
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.77
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.77
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.77
PLN02300	286	lactoylglutathione lyase	99.77
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.76
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.76
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.76
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.76
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.76
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.75
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.75
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.74
PRK11478	129	putative lyase; Provisional	99.74
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.74
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.74
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.73
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.73
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	99.73
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.73
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.73
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.73
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.72
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.72
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.72
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.72
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.72
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.71
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.71
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.7
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.7
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.7
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.69
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.69
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.69
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.69
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.69
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.69
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.69
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.68
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.68
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.68
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.68
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.68
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.68
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.68
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.67
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.67
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.67
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.67
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.67
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.67
PRK06724	128	hypothetical protein; Provisional	99.67
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.66
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.66
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.66
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.66
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.66
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.66
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.66
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.66
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.66
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.66
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.65
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.65
PRK06724	128	hypothetical protein; Provisional	99.65
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.65
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.65
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.65
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.65
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.65
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.65
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.65
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.64
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.64
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.64
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.64
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.64
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.64
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.63
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.63
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.63
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.62
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.62
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.62
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.62
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.62
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.6
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.6
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.6
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.6
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.6
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.59
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.59
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.59
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.59
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.59
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.59
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.59
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.59
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.59
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.58
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.58
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.58
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.57
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.57
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.57
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.57
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.57
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.57
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.57
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.56
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.56
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.56
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.56
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.55
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.55
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.54
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.54
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.54
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.54
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.54
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.53
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.53
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.52
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.51
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.48
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.46
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.46
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.45
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.44
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.42
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.41
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.35
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.34
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.32
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.25
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.21
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.14
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.13
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.12
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.11
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	99.07
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.03
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.03
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.96
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.95
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.95
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.91
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.91
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.9
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.76
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.66
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.61
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.52
PRK10148	147	hypothetical protein; Provisional	98.51
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.41
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.22
PRK10148	147	hypothetical protein; Provisional	98.21
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	97.9
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	97.76
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	96.21
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.14
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.08
PF15067	236	FAM124: FAM124 family	95.69
PF15067	236	FAM124: FAM124 family	95.03
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	93.33
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	80.04

>PLN02300 lactoylglutathione lyase

Probab=100.00  E-value=1.6e-43  Score=298.42  Aligned_cols=284  Identities=80%  Similarity=1.323  Sum_probs=228.6

Q ss_pred             CCCCcccccccccCCCCCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeec
Q 022835            2 AEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN   81 (291)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~   81 (291)
                      |.+|++..-.+..+++++.+.+|.|+.|.|+|++++++||+++|||++..+...+...+...++..++...++.+++...
T Consensus         3 ~~~~~~~~~~~~~~~~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~   82 (286)
T PLN02300          3 AAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYN   82 (286)
T ss_pred             cccccChhhhhhhcCCccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEecc
Confidence            45677777788889998999999999999999999999999999999987655555556667776665455667777654


Q ss_pred             CCCccccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCCCCCceeEeeee
Q 022835           82 YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRV  161 (291)
Q Consensus        82 ~~~~~~~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~~~~~hv~l~v  161 (291)
                      ........+.+..|++|.|+|+++++++|+++|+++...+...+++...++||+||+|+.|||++....+.++.|+.|.|
T Consensus        83 ~~~~~~~~~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~l~~  162 (286)
T PLN02300         83 YGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRV  162 (286)
T ss_pred             CCCCccccCCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCcceeEEEEe
Confidence            33333345568899999999999999999999999888777776655555889999999999999998889999999999


Q ss_pred             CCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHHHHHHHH
Q 022835          162 GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN  241 (291)
Q Consensus       162 ~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~~~~~l~  241 (291)
                      +|++++.+||+++|||++......++.++..+++...+......+++..+.+...+..+++.+|++|.|+|++++++++ 
T Consensus       163 ~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di~~~~~~~-  241 (286)
T PLN02300        163 GDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAI-  241 (286)
T ss_pred             CCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCHHHHHHHH-
Confidence            9999999999999999988654444445666655543322234566544333223345678999999999999999999 


Q ss_pred             HHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhHHhhh
Q 022835          242 LVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELQ  289 (291)
Q Consensus       242 ~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~~~~~  289 (291)
                         +++|+++..+|...++.++++++|+||||+.|+|++..++.++|.
T Consensus       242 ---~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~~~~~~~  286 (286)
T PLN02300        242 ---KLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE  286 (286)
T ss_pred             ---HHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccchhhhhcC
Confidence               999999999988887655688999999999999999999999873

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=100.00  E-value=3e-32  Score=232.35  Aligned_cols=241  Identities=21%  Similarity=0.239  Sum_probs=164.9

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEe
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v  100 (291)
                      +++|+||.|.|+|++++.+||+++|||++..+...      .+++.......+..+.+...       ...++.|++|.|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~-------~~~g~~hiaf~v   68 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDGQ------RVYLKAWDEWDHYSVILTEA-------DTAGLDHMAFKV   68 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecCc------eEEEEeccccccceEeeccC-------CCCceeEEEEEe
Confidence            68999999999999999999999999998755321      23333211111222333221       234688999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC---------------------CCCcee
Q 022835          101 E---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT---------------------PEPLCQ  156 (291)
Q Consensus       101 ~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~---------------------~~~~~h  156 (291)
                      +   ++++++++|+++|+++...+.....+....+||+||+|+.+||++....                     +.+++|
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H  148 (303)
T TIGR03211        69 ESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDH  148 (303)
T ss_pred             CCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccccccccccccCCcccccccCCcCceeEEE
Confidence            7   7899999999999998755432221222348999999999999985421                     235899


Q ss_pred             EeeeeCCchhcHHHHHHhhCCeeeeeecCCCcce-eEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHH
Q 022835          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKY-TLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~  235 (291)
                      ++|.|+|++++.+||+++|||++..+....++.. ...++.....  ...+.+...      +...+.+|++|.|+|+++
T Consensus       149 i~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~g~~~Hiaf~v~~~~~  220 (303)
T TIGR03211       149 CLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK--AHDIAFVGD------PEPGKLHHVSFFLDSWED  220 (303)
T ss_pred             EeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC--CcccceecC------CCCCceEEEEEEcCCHHH
Confidence            9999999999999999999999876644333321 2233432221  122222110      112238999999998544


Q ss_pred             HHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          236 SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      ..+. ..+|+++|+++..+|++++...++++||+|||||+||++....
T Consensus       221 v~~~-~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~  267 (303)
T TIGR03211       221 VLKA-ADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFGGGY  267 (303)
T ss_pred             HHHH-HHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEecCCe
Confidence            3332 2444999999988888766444689999999999999985433

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=100.00  E-value=1.7e-31  Score=226.84  Aligned_cols=238  Identities=23%  Similarity=0.270  Sum_probs=165.4

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      ++.+|+||.|.|+|++++++||+++|||++..+..  .    ..++..........+.+...       ...++.|++|.
T Consensus         1 ~i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~--~----~~~~~~~~~~~~~~l~l~~~-------~~~~~~hiaf~   67 (294)
T TIGR02295         1 NILRTGHVELRVTDLDKSREFYVDLLGFRETESDK--E----YIYLRGIEEFQHHSLVLTKA-------PSAALSYIGFR   67 (294)
T ss_pred             CCceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC--C----eEEEeccCcCCceEEEeeeC-------CCcCccEEEEE
Confidence            47899999999999999999999999999875532  1    23343211111222333221       23467899999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC---------------CCCCceeEeeee
Q 022835          100 TE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP---------------TPEPLCQVMLRV  161 (291)
Q Consensus       100 v~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~---------------~~~~~~hv~l~v  161 (291)
                      |+   |+++++++|+++|+++...+.  +++. ..+||+||+|+.+||+....               .+.+++|++|.|
T Consensus        68 v~~~~dl~~~~~~l~~~Gv~v~~~~~--~~~~-~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~i~Hv~l~v  144 (294)
T TIGR02295        68 VSKEEDLDKAADFFQKLGHPVRLVRD--GGQP-EALRVEDPFGYPIEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFV  144 (294)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEeecC--CCCc-eEEEEECCCCCEEEEEEchhhcccccccccccCCccceeeeeEEEEe
Confidence            96   789999999999999776432  2222 45899999999999987431               135689999999


Q ss_pred             CCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHHHHHHHH
Q 022835          162 GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN  241 (291)
Q Consensus       162 ~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~~~~~l~  241 (291)
                      +|++++.+||+++||+++..+.....+.....++.....  .+.+.+..       ..+++++|++|.|+|.++. .++.
T Consensus       145 ~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~~~~~Hiaf~v~d~~~v-~~~~  214 (294)
T TIGR02295       145 PDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGG--VHDIALTN-------GNGPRLHHIAYWVHDPLNI-IKAC  214 (294)
T ss_pred             CCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCC--cCceEeec-------CCCCceeeEEEEcCCHHHH-HHHH
Confidence            999999999999999998766443333323333432221  22333321       1235889999999995443 2333


Q ss_pred             HHHHHhCCe--eccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          242 LVTQELGGK--ITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       242 ~~~~~~G~~--~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      .+++++|++  +...|+++......++|++||+|++|||+....
T Consensus       215 ~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~~  258 (294)
T TIGR02295       215 DILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGDY  258 (294)
T ss_pred             HHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEeccc
Confidence            444999997  666777655444578999999999999987543

The enzyme from Bacillus brevis contains manganese.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=100.00  E-value=9e-31  Score=221.32  Aligned_cols=237  Identities=17%  Similarity=0.206  Sum_probs=164.3

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEe
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v  100 (291)
                      +.+|.||.|.|+|++++++||+++|||+...+..  .+   ..|+..+...  ..+.+....       ..++.|++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~~---~~~~~~~~~~--~~~~l~~~~-------~~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--ND---ALYLRLDSRA--HRIAVHPGE-------SDDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--Cc---eEEEEcCCCc--eEEEEEECC-------cCCeeeEeeee
Confidence            5789999999999999999999999998754321  11   2354554322  223332221       13577899999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCcc---CCCCceEEEEEECCCCCEEEEEEcCCC------------------CCCcee
Q 022835          101 ED---VYKLVENIRAKGGNVTREPGP---LKGGTTHIAFVKDPDGYIFELIQRGPT------------------PEPLCQ  156 (291)
Q Consensus       101 ~d---i~~~~~~l~~~G~~~~~~~~~---~~~g~~~~~~~~dp~G~~iel~~~~~~------------------~~~~~h  156 (291)
                      ++   ++++.++|+++|+++...+..   ..++ ...++|+||+||.+||+.....                  +.++.|
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~-~~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H  145 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGV-LGLIKFTDPGGNPLEIYYGAVEDFEKPFVSPRAVSGFVTGDQGLGH  145 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccc-eEEEEEECCCCCEEEEEEcccccCCCCCCCCCCCCccccCCccccE
Confidence            88   889999999999997764431   1222 3348999999999999874311                  236899


Q ss_pred             EeeeeCCchhcHHHHHHhhCCeeeeeecC--CCc-ceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecch
Q 022835          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDK--PEY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~  233 (291)
                      +.|.|+|++++.+||+++|||++..+...  +++ .+...++.+.+.  ++.+.+...      +...+.+|++|.|+|.
T Consensus       146 v~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~--~~~~~l~~~------~~~~~~~Hiaf~v~d~  217 (286)
T TIGR03213       146 IVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNER--HHSLAFAAG------PSEKRLNHLMLEVDTL  217 (286)
T ss_pred             EEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCC--cceEEEecC------CCCCceEEEEEEcCCH
Confidence            99999999999999999999998766432  111 112344544332  223333211      1235789999999996


Q ss_pred             HHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      ++. .++..+|+++|+ ....|++++..+..++|++||+|++||+....
T Consensus       218 ~~v-~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~~  264 (286)
T TIGR03213       218 DDV-GLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWGA  264 (286)
T ss_pred             HHH-HHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecCc
Confidence            653 222244499999 66677776655678899999999999998743

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.97  E-value=3.9e-30  Score=197.98  Aligned_cols=258  Identities=51%  Similarity=0.873  Sum_probs=214.8

Q ss_pred             ccCCCCCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCC-----------CceEEEEEecCCCCcceEEEeeec
Q 022835           13 LLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----------EKYSNAFLGFGPEQSHFVVELTYN   81 (291)
Q Consensus        13 ~~~~~~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~l~~~~~   81 (291)
                      +..+++.+-.++-|+.+.|.|..+++.||+++|||++.+-.++++           +.|+-.++++|+...+|+++++.+
T Consensus         7 ~~~~~~~~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYN   86 (299)
T KOG2943|consen    7 LLCWMKADTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYN   86 (299)
T ss_pred             hhhhhhccchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEec
Confidence            346677788999999999999999999999999999998878777           678889999999999999999999


Q ss_pred             CCCccccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCCCCCceeEeeee
Q 022835           82 YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRV  161 (291)
Q Consensus        82 ~~~~~~~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~~~~~hv~l~v  161 (291)
                      ++...+..|.++.|+.+.++|+-...+.+..-|.+        ..|.. .+++.||||+.++|++..+.+.++..|.++|
T Consensus        87 YgV~~YelGndfg~i~I~s~dv~~~ve~v~~p~~~--------~~g~~-~~~v~dPdGykF~l~~~~p~s~pv~~V~l~V  157 (299)
T KOG2943|consen   87 YGVSKYELGNDFGGITIASDDVFSKVEKVNAPGGK--------GSGCG-IAFVKDPDGYKFYLIDRGPQSDPVLQVMLNV  157 (299)
T ss_pred             cCccceeccCCcccEEEeHHHHHHHHHHhcCcCCc--------ccceE-EEEEECCCCcEEEEeccCCCCCCeEEEEEEe
Confidence            99999999999999999999887777776655532        12222 3778999999999999888899999999999


Q ss_pred             CCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHHHHHHHH
Q 022835          162 GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN  241 (291)
Q Consensus       162 ~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~~~~~l~  241 (291)
                      .|+++++.||.+.||+++.+.    +..++.++++.++.  ...++|..+++...+..+.+...+++..+++....+.+ 
T Consensus       158 gdL~ks~kyw~~~lgM~ilek----eek~t~~~mgYgd~--q~~LElt~~~~~id~~kg~griafaip~d~~~~l~e~i-  230 (299)
T KOG2943|consen  158 GDLQKSIKYWEKLLGMKILEK----EEKYTRARMGYGDE--QCVLELTYNYDVIDRAKGFGRIAFAIPTDDLPKLQEAI-  230 (299)
T ss_pred             hhHHHHHHHHHHHhCcchhhh----hhhhhhhhhccCCc--ceEEEEEeccCcccccccceeEEEeccccccccHHHHH-
Confidence            999999999999999998864    33456677776653  58899999888877777778888888889999999999 


Q ss_pred             HHHHHhCCeeccCCccC--CCC-CceEEEEECCCCceEEEecchhhHHhhh
Q 022835          242 LVTQELGGKITRQPGPI--PGL-NTKITSFVDPDGWKTVLVDNEDFLKELQ  289 (291)
Q Consensus       242 ~~~~~~G~~~~~~p~~~--~~~-~~~~~~~~DPdG~~ie~~~~~~~~~~~~  289 (291)
                         +..+.++..+..+.  |+. ...+.-+.||||+.|.|+.++++.+.++
T Consensus       231 ---K~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde~F~~lsk  278 (299)
T KOG2943|consen  231 ---KSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDEGFRKLSK  278 (299)
T ss_pred             ---HHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccHHHHHHhc
Confidence               77766665554432  222 3566778999999999999999987765

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.91  E-value=1.4e-22  Score=175.73  Aligned_cols=223  Identities=22%  Similarity=0.348  Sum_probs=150.7

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCc----cc--cCCCCceE
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT----SY--DIGTGFGH   95 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~----~~--~~~~~~~~   95 (291)
                      ++++||.|.|+|++++.+||++.|||+........... ....++  .++..  +.+..+....    .+  .+|.+++|
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~--~G~~~--l~L~~~~~~~s~~~~~~~~hg~gv~~   75 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLR--QGQIN--FVLTAPYSSDSPAADFAAKHGDGVKD   75 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEE--eCCEE--EEEecCCCCCchHHHHHHhCCCceEE
Confidence            47899999999999999999999999998763222221 222333  23333  3343322111    11  26789999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC-------------------------C
Q 022835           96 FAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP-------------------------T  150 (291)
Q Consensus        96 i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~-------------------------~  150 (291)
                      +||.|+|+++++++++++|+++..+|.....|...+..++.++|..+-|++...                         .
T Consensus        76 iaf~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (353)
T TIGR01263        76 VAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVG  155 (353)
T ss_pred             EEEEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCCCCCCCCCCCccccccccccccCCCCCC
Confidence            999999999999999999999887765431122222334555555555554210                         0


Q ss_pred             CCCceeEeeeeC--CchhcHHHHHHhhCCeeeeeecCCCc--c-eeEEEecccccccceeEeeccccC---cc------c
Q 022835          151 PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPEY--K-YTLAMLGYAEEDQTTVLELTYNYG---VT------E  216 (291)
Q Consensus       151 ~~~~~hv~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~l~l~~~~~---~~------~  216 (291)
                      ..+++|+++.|+  |++++.+||+++|||++..+......  + ...++..   +.....++|..+..   ..      .
T Consensus       156 ~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~---~~g~~~i~L~ep~~~~~~s~i~~fl~  232 (353)
T TIGR01263       156 LIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMAS---PDGKVKIPLNEPASGKDKSQIEEFLE  232 (353)
T ss_pred             eEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEEC---CCCcEEEEEeccCCCCCCCHHHHHHH
Confidence            124999999999  99999999999999998876543221  1 1222222   11246677765311   11      1


Q ss_pred             cccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCc
Q 022835          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       217 ~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      ...|+|++|++|.|+|+++++++|    +++|++++..|.
T Consensus       233 ~~~g~Gv~HiAf~vdDi~~~~~~l----~~~Gv~~l~~P~  268 (353)
T TIGR01263       233 FYNGAGVQHIALNTDDIVRTVRAL----RARGVEFLDTPD  268 (353)
T ss_pred             HcCCCCccEEEEEcCCHHHHHHHH----HHcCCccCcCCH
Confidence            224789999999999999999999    999999998773

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.88  E-value=9.8e-21  Score=162.67  Aligned_cols=224  Identities=17%  Similarity=0.247  Sum_probs=159.0

Q ss_pred             eEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCC--ceEEEEEecCCCCcceEEEeeecCC------------------
Q 022835           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYG------------------   83 (291)
Q Consensus        24 i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~l~~~~~~~------------------   83 (291)
                      |+||.++|.|.+++..||+..|||+.+.......+  ......++  ++...+++.-...+.                  
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r--~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLR--SGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFS   78 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEE--eCCEEEEEeCCCCCccccccccccccccccccC
Confidence            68999999999999999999999999876553222  22333343  445555554331110                  


Q ss_pred             ---Cccc--cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCC----CceEEEEEECCCCCEEEEEEcCC-----
Q 022835           84 ---VTSY--DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG----GTTHIAFVKDPDGYIFELIQRGP-----  149 (291)
Q Consensus        84 ---~~~~--~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~----g~~~~~~~~dp~G~~iel~~~~~-----  149 (291)
                         ...+  .+|++++.+||+|+|++++++++.++|+....+|.....    |...+..++.++|.++.|++...     
T Consensus        79 ~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~~~~~~~  158 (398)
T PLN02875         79 SDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYKGFDGAK  158 (398)
T ss_pred             cHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccCCCCCCc
Confidence               0111  278899999999999999999999999998877665422    22334556778888888877421     


Q ss_pred             ------------------CCCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCc-----ceeEEEecccccccceeE
Q 022835          150 ------------------TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-----KYTLAMLGYAEEDQTTVL  206 (291)
Q Consensus       150 ------------------~~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l  206 (291)
                                        ...+++|+++.|++++.+..||+++|||+........+.     +....++..+  .....+
T Consensus       159 f~p~f~~~~~~~~~~~~~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp--~g~v~i  236 (398)
T PLN02875        159 FLPGYEPVESSSSFPLDYGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASN--NEMVLL  236 (398)
T ss_pred             cCCCcccccccccCCCCCCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcC--CCcEEE
Confidence                              023599999999999999999999999998865443221     1233334422  235667


Q ss_pred             eeccccCc---cc-------cccCcceeeEEEEecchHHHHHHHHHHHHHh----CCeeccCC
Q 022835          207 ELTYNYGV---TE-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQEL----GGKITRQP  255 (291)
Q Consensus       207 ~l~~~~~~---~~-------~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~----G~~~~~~p  255 (291)
                      +|..+...   .+       ...|+|++||||.|+|+.+++++|    +++    |++++..|
T Consensus       237 pLnEP~~~~~~~SqI~eFL~~~~G~GIQHIAl~tdDI~~av~~L----ra~~~~~Gv~fL~~P  295 (398)
T PLN02875        237 PLNEPTFGTKRKSQIQTYLEHNEGPGLQHLALKSDDIFGTLREM----RARSHIGGFEFMPPP  295 (398)
T ss_pred             EeccCCCCCCCcChHHHHHHhcCCCCeeEEEeecCCHHHHHHHH----HhccccCCeecCCCC
Confidence            77665321   11       235789999999999999999999    998    99999976

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.86  E-value=2.1e-19  Score=143.03  Aligned_cols=194  Identities=21%  Similarity=0.293  Sum_probs=132.3

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCC-ccccCCCCceEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TSYDIGTGFGHFA   97 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~i~   97 (291)
                      ...+.+..|.|.|+|++++..||++++|+++..+...      .+.+..++.   ..+.+.+.+.. .+.....|+.|+|
T Consensus         6 ~~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~~------~v~L~vgg~---~LL~L~q~~~a~~~~~~~aGLyH~A   76 (265)
T COG2514           6 TTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETDG------SVTLGVGGT---PLLTLEQFPDARRPPPRAAGLYHTA   76 (265)
T ss_pred             CCCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccCc------eEEEeeCCE---EEEEEEeCCCCCCCCccccceeeee
Confidence            3467899999999999999999999999999876542      355555532   33444443333 2334667999999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC------------------------
Q 022835           98 IATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT------------------------  150 (291)
Q Consensus        98 ~~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~------------------------  150 (291)
                      |.+++   +..+..++...|+.+... ....  -...+||.||+||-||++..++.                        
T Consensus        77 fLlP~r~~L~~~l~hl~~~~~~l~Ga-~DH~--vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~~v~m~t~~ld~~~ll~  153 (265)
T COG2514          77 FLLPTREDLARVLNHLAEEGIPLVGA-SDHL--VSEALYLEDPEGNGIEIYADRPRSTWDWQNDQVKMDTEPLDVEALLE  153 (265)
T ss_pred             eecCCHHHHHHHHHHHHhcCCccccc-Ccch--hheeeeecCCCCCeEEEEecCChHHhcccCCeeeecccccCHHHHhh
Confidence            99975   667778888888876532 1111  12248999999999999987531                        


Q ss_pred             ------------CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccc--cCccc
Q 022835          151 ------------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYN--YGVTE  216 (291)
Q Consensus       151 ------------~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~--~~~~~  216 (291)
                                  ...+.||.|.|.|++++.+||+++|||++..+.+      .-.|+..++.+  +.+.+...  .....
T Consensus       154 ~~~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~YH--HHia~N~W~s~~~~~  225 (265)
T COG2514         154 EATKEPWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDYH--HHLAANTWNSRGARP  225 (265)
T ss_pred             hccccccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCcc--eeEEEeccccCCCCC
Confidence                        1348999999999999999999999999887621      22345544543  33333221  11111


Q ss_pred             c-ccCcceeeEEEEecc
Q 022835          217 Y-TKGNAYAQVAISTDD  232 (291)
Q Consensus       217 ~-~~~~~~~h~~f~v~d  232 (291)
                      . ....|+..+.+.+.+
T Consensus       226 ~~~~~~GLa~~~i~~~~  242 (265)
T COG2514         226 RNANASGLAWLEIHTPD  242 (265)
T ss_pred             CCCCCCCcceEEEEcCC
Confidence            1 122367777777777

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.85  E-value=1.2e-19  Score=138.66  Aligned_cols=135  Identities=64%  Similarity=1.080  Sum_probs=103.4

Q ss_pred             CCCCCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCce
Q 022835           15 EWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFG   94 (291)
Q Consensus        15 ~~~~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   94 (291)
                      .-++...++|+||.|.|+|++++.+||+++|||++..+...+...+..+++..++......+.+.......+...+.++.
T Consensus         9 ~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~   88 (150)
T TIGR00068         9 ADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFG   88 (150)
T ss_pred             cCcccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCcee
Confidence            34567789999999999999999999999999998776554454455566665543344556555433322333455889


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           95 HFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        95 ~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      |++|.|+|+++++++|.++|+++..++...+.+....+||+||+|++|||++..+
T Consensus        89 hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  143 (150)
T TIGR00068        89 HIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKS  143 (150)
T ss_pred             EEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCc
Confidence            9999999999999999999999887765555555555889999999999998764

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PLN02367 lactoylglutathione lyase

Probab=99.84  E-value=4.9e-20  Score=146.53  Aligned_cols=131  Identities=34%  Similarity=0.594  Sum_probs=105.6

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEeccccc---------------ccceeEeeccccCcc
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE---------------DQTTVLELTYNYGVT  215 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~~  215 (291)
                      ...+.|+.|+|.|++++.+||+++|||++..+...++.++.+++++.++.               .....|||+.+.+..
T Consensus        73 ~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e  152 (233)
T PLN02367         73 GYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTE  152 (233)
T ss_pred             CcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCC
Confidence            35699999999999999999999999999988877777788888864321               123578997765433


Q ss_pred             c------cccC----cceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhH
Q 022835          216 E------YTKG----NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       216 ~------~~~~----~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~  285 (291)
                      .      +..+    .|+.|++|.|+|++++++++    +++|+++...|...++  .+++|++||||++|||++.+.+.
T Consensus       153 ~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL----~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~~~  226 (233)
T PLN02367        153 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF----EELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKTIG  226 (233)
T ss_pred             ccccchhcccCCCCCCCceEEEEEcCCHHHHHHHH----HHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEeccccc
Confidence            1      3333    48999999999999999999    9999999987765333  57899999999999999998876


Q ss_pred             Hh
Q 022835          286 KE  287 (291)
Q Consensus       286 ~~  287 (291)
                      +.
T Consensus       227 ~~  228 (233)
T PLN02367        227 TT  228 (233)
T ss_pred             cc
Confidence            43

>PRK10291 glyoxalase I; Provisional

Probab=99.83  E-value=4.1e-19  Score=132.26  Aligned_cols=124  Identities=56%  Similarity=1.006  Sum_probs=95.7

Q ss_pred             EEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCCHHHHH
Q 022835           28 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLV  107 (291)
Q Consensus        28 ~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~di~~~~  107 (291)
                      .|.|+|++++++||+++|||++......+..++.++++..++......+++.......+...+.+..|+||.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            37899999999999999999988776666666777787665434444566654333333345668899999999999999


Q ss_pred             HHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCCC
Q 022835          108 ENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus       108 ~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~  151 (291)
                      ++|+++|+++..++...+++....++|+||||++|||++....+
T Consensus        81 ~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~~  124 (129)
T PRK10291         81 EKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAG  124 (129)
T ss_pred             HHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccccc
Confidence            99999999988766555566555578899999999999987543

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.83  E-value=1.7e-19  Score=137.78  Aligned_cols=137  Identities=46%  Similarity=0.806  Sum_probs=101.3

Q ss_pred             CCCCCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEE
Q 022835          148 GPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVA  227 (291)
Q Consensus       148 ~~~~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~  227 (291)
                      +....++.|+.|.|+|++++.+||+++|||++..+....+.++..++++.+.......+++.......+...+.+..|++
T Consensus        12 ~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~   91 (150)
T TIGR00068        12 KTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIA   91 (150)
T ss_pred             ccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEE
Confidence            34467899999999999999999999999998765443344444555654332233445553322222223345789999


Q ss_pred             EEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhHHhh
Q 022835          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKEL  288 (291)
Q Consensus       228 f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~~~~  288 (291)
                      |.|+|++++++++    .++|+++..+|...+....+.+||+||||++|||++..+-.+.+
T Consensus        92 f~v~dld~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~  148 (150)
T TIGR00068        92 IGVDDVYKACERV----RALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTKDGL  148 (150)
T ss_pred             EecCCHHHHHHHH----HHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCchhhhc
Confidence            9999999999999    99999998888655554457889999999999999998776654

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PLN02367 lactoylglutathione lyase

Probab=99.82  E-value=9.7e-19  Score=139.16  Aligned_cols=128  Identities=36%  Similarity=0.668  Sum_probs=102.5

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCC---------------CcceEEEeeecCCC
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE---------------QSHFVVELTYNYGV   84 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~~l~~~~~~~~   84 (291)
                      .=-.+.|+.|.|.|++++++||+++|||++..+.++++.++.++|+..++.               .....|+|.++.+.
T Consensus        72 ~~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~  151 (233)
T PLN02367         72 KGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGT  151 (233)
T ss_pred             CCcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCC
Confidence            346799999999999999999999999999999888888899999865331               11346788765543


Q ss_pred             c------cccCC----CCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           85 T------SYDIG----TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        85 ~------~~~~~----~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .      .+..+    .|+.|+||.|+|+++++++|+++|+++...|....+  ...++++||||++|||++...
T Consensus       152 e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~  224 (233)
T PLN02367        152 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKT  224 (233)
T ss_pred             CccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEeccc
Confidence            2      13322    489999999999999999999999999877765443  234789999999999999773

>PRK10291 glyoxalase I; Provisional

Probab=99.82  E-value=3e-19  Score=133.00  Aligned_cols=123  Identities=50%  Similarity=0.908  Sum_probs=91.7

Q ss_pred             eeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHHHH
Q 022835          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~~~  237 (291)
                      .|.|.|++++.+||+++|||++......++..+.++++..++......+++........+..+.+.+|++|.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            37899999999999999999987665545555667776644322334456644333223334567899999999999999


Q ss_pred             HHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhh
Q 022835          238 EVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                      ++|    +++|+++..+|...+++..+++||+||||++|||++.++.
T Consensus        81 ~~l----~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~  123 (129)
T PRK10291         81 EKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  123 (129)
T ss_pred             HHH----HHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEcccc
Confidence            999    9999999877765555334678899999999999998753

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.81  E-value=5.6e-18  Score=132.27  Aligned_cols=127  Identities=35%  Similarity=0.651  Sum_probs=97.4

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCC---------------cceEEEeeecCCC
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQ---------------SHFVVELTYNYGV   84 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~l~~~~~~~~   84 (291)
                      .=-++.|+.|.|+|++++++||+++|||++..+...+..+++++++..++..               ....|++..+...
T Consensus        24 ~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~  103 (185)
T PLN03042         24 KGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGT  103 (185)
T ss_pred             CCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCC
Confidence            3578999999999999999999999999998887777777888887643211               1235777654332


Q ss_pred             cc------cc----CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           85 TS------YD----IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        85 ~~------~~----~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ..      +.    .+.|+.|+||.|+|+++++++|+++|+.+...+....+  ...++++||+|++|||++..
T Consensus       104 ~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~--~~~~fi~DPdG~~IEl~e~~  175 (185)
T PLN03042        104 ESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKM--KGLAFIKDPDGYWIEIFDLK  175 (185)
T ss_pred             cccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCc--eeEEEEECCCCCEEEEEECC
Confidence            11      22    22489999999999999999999999998866543322  23477899999999999976

>PRK11478 putative lyase; Provisional

Probab=99.81  E-value=2.5e-18  Score=127.97  Aligned_cols=124  Identities=19%  Similarity=0.257  Sum_probs=85.1

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCC-ceEEEEEecCCCCcceEEEeeecC--C-CccccCCCCce
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYNY--G-VTSYDIGTGFG   94 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~l~~~~~~--~-~~~~~~~~~~~   94 (291)
                      +.+.+++||+|.|+|++++.+||+++|||++......+.. .+. ..+..+ +  ...+++....  . ........|+.
T Consensus         2 ~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~-~~~~~~-~--~~~l~l~~~~~~~~~~~~~~~~g~~   77 (129)
T PRK11478          2 LGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWK-GDLALN-G--QYVIELFSFPFPPERPSRPEACGLR   77 (129)
T ss_pred             CCcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccce-eeEecC-C--CcEEEEEEecCCCCCCCCCCCCcee
Confidence            4688999999999999999999999999998644222221 111 112222 1  2334443211  1 11112335788


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835           95 HFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        95 ~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      |+||.|+|+++++++|+++|+++...+....+|.. ++||+||+|+.+||++.
T Consensus        78 hi~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         78 HLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKR-FTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             EEEEEeCCHHHHHHHHHHcCCeeeccccCCCCCCE-EEEEECCCCCEEEEEeC
Confidence            99999999999999999999997654333334544 48999999999999873

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=3e-18  Score=129.72  Aligned_cols=123  Identities=21%  Similarity=0.334  Sum_probs=88.7

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCC-----------CceEEEEEecCCCCcceEEEeeecCC--C--c
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----------EKYSNAFLGFGPEQSHFVVELTYNYG--V--T   85 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~l~~~~~~~--~--~   85 (291)
                      +.+++||+|.|+|++++.+||++ |||++..+...++           ......++...++  ...+++.....  .  .
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g--~~~iel~~~~~~~~~~~   77 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDG--HSRLELSKFHHPAVIAD   77 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCC--CceEEEEEecCCCCcCc
Confidence            47899999999999999999999 9998865543221           2234445543222  33444443211  1  1


Q ss_pred             ---cccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835           86 ---SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        86 ---~~~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                         ....+.|..|+||.|+|+++++++|+++|+++..++...+++.+ .+|++||+|+.|||+|.
T Consensus        78 ~~~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r-~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          78 HRPAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYR-LCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeE-EEEEECCCCCEEEeeec
Confidence               11234578999999999999999999999998876655555554 48999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.80  E-value=1.2e-18  Score=135.96  Aligned_cols=129  Identities=32%  Similarity=0.587  Sum_probs=98.4

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccc---------------cceeEeeccccCcc
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVT  215 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~~~~~~  215 (291)
                      ..++.|+.|+|.|++++++||+++|||++..+...++.++.+++++.....               ....|+|..+.+..
T Consensus        25 ~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~  104 (185)
T PLN03042         25 GYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTE  104 (185)
T ss_pred             CcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCc
Confidence            457999999999999999999999999998886655656777777532210               13468887643322


Q ss_pred             c------cc----cCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhH
Q 022835          216 E------YT----KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       216 ~------~~----~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~  285 (291)
                      +      +.    .+.|+.|++|.|+|+++++++|    +++|+++...|....  +.+++|++||||++|||++.+.+.
T Consensus       105 ~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L----~~~Gv~v~~~p~~~~--~~~~~fi~DPdG~~IEl~e~~~~~  178 (185)
T PLN03042        105 SDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERF----EKLGVEFVKKPDDGK--MKGLAFIKDPDGYWIEIFDLKRIG  178 (185)
T ss_pred             ccccccccccCCCCCCCccEEEEEcCCHHHHHHHH----HHCCCeEEeCCccCC--ceeEEEEECCCCCEEEEEECCCch
Confidence            1      21    1248999999999999999999    999999987665432  246788999999999999987654

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.78  E-value=6.1e-18  Score=124.30  Aligned_cols=120  Identities=46%  Similarity=0.786  Sum_probs=89.9

Q ss_pred             ceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCc-cccccCcceeeEEEEecc
Q 022835          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV-TEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~~~~h~~f~v~d  232 (291)
                      +.|+.|.|+|++++.+||+++||+++.......+.+...+++..++...+..+++...... .....+.+..|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5799999999999999999999999876654444345555666433112345555443222 122334578999999999


Q ss_pred             hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEe
Q 022835          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~  279 (291)
                      ++++++++    +++|+++..+|...+  +.+++||+||||++|||+
T Consensus        81 id~~~~~l----~~~G~~~~~~~~~~~--~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERL----EEMGVEVTKPPGDGG--MKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHH----HHCCCEEeeCCccCC--CceEEEEECCCCCEEEeC
Confidence            99999999    999999998887652  468899999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.78  E-value=1.6e-17  Score=122.00  Aligned_cols=120  Identities=53%  Similarity=0.944  Sum_probs=89.0

Q ss_pred             eEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCC-ccccCCCCceEEEEEeCC
Q 022835           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TSYDIGTGFGHFAIATED  102 (291)
Q Consensus        24 i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~i~~~v~d  102 (291)
                      |.||.|.|+|++++.+||+++|||++......++..+..+++..+.......+.+...... .....+.+..|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5899999999999999999999999887655544455667776543102333444433221 222344578899999999


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEE
Q 022835          103 VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       103 i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      +++++++++++|+.+..++... .+. .+++|+||+|+++||+
T Consensus        81 id~~~~~l~~~G~~~~~~~~~~-~~~-~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERLEEMGVEVTKPPGDG-GMK-GIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHHHHCCCEEeeCCccC-CCc-eEEEEECCCCCEEEeC
Confidence            9999999999999988877655 333 3488999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.78  E-value=2.1e-18  Score=132.01  Aligned_cols=123  Identities=19%  Similarity=0.229  Sum_probs=88.7

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCC-CcceeEEEecccccc---cceeEeeccccCccccccCcceeeEEE
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-EYKYTLAMLGYAEED---QTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~l~l~~~~~~~~~~~~~~~~h~~f  228 (291)
                      +++|++|.|+|++++++||+++||+++..+.... +.+....++..+...   ..+.+.+..       ..+.+++|++|
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ-------GPESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc-------CCCCceeEEEE
Confidence            4789999999999999999999999987654332 222344555532210   011121211       11458999999


Q ss_pred             EecchHHHH---HHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhHH
Q 022835          229 STDDVYKSA---EVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       229 ~v~d~~~~~---~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~~  286 (291)
                      .|+|++++.   ++|    +++|+++.++|+++..+...++|++|||||+|||+......+
T Consensus        74 ~v~die~~~~~~~~L----~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~~~~~  130 (153)
T cd07257          74 EVHDFDAQGLGHDYL----REKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDGDLVN  130 (153)
T ss_pred             EcCCHHHHHHHHHHH----HHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCceeEc
Confidence            999988876   556    999999998888876555678899999999999998765443

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.78  E-value=1.8e-17  Score=124.44  Aligned_cols=120  Identities=18%  Similarity=0.252  Sum_probs=89.5

Q ss_pred             eEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCC-c---c--ccCCCCceEEE
Q 022835           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-T---S--YDIGTGFGHFA   97 (291)
Q Consensus        24 i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-~---~--~~~~~~~~~i~   97 (291)
                      |+|+.|.|+|++++.+||+++|||++......+  .....++.  .+.  ..+.+...... .   .  ...+.+..|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~--~g~--~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLR--QGD--INFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEE--cCC--EEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            589999999999999999999999987764432  12233343  222  23334332111 1   1  12456889999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC
Q 022835           98 IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        98 ~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      |.|+|+++++++|+++|+++..+|...+++.+ .++++||+|++|||++....
T Consensus        75 ~~V~Dvda~~~~l~~~G~~v~~~p~~~~~~~~-~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          75 FRVDDAAAAYERAVARGAKPVQEPVEEPGELK-IAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             EEeCCHHHHHHHHHHcCCeEccCceecCCeEE-EEEEeccCCcEEEEEecCCC
Confidence            99999999999999999999988887666554 48899999999999997743

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=99.78  E-value=1.5e-18  Score=139.60  Aligned_cols=255  Identities=20%  Similarity=0.327  Sum_probs=171.5

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCC--ceEEEEEecCCCCcceEEEeeecCCCcc-----ccCCC
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGVTS-----YDIGT   91 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~l~~~~~~~~~~-----~~~~~   91 (291)
                      -.+.+|+||.+.|.|...+..||+..|||+.....+.+.+  .+..+.++  ++...+++.....+....     ..+|.
T Consensus        13 g~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr--~g~~vFv~~s~~~p~~~~~G~~l~~Hgd   90 (381)
T KOG0638|consen   13 GKFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALR--QGKIVFVFNSAYNPDNSEYGDHLVKHGD   90 (381)
T ss_pred             cceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhh--cCCEEEEEecCCCCCchhhhhhhhhccc
Confidence            3588999999999999999999999999998765433332  12222233  444545444333332211     23778


Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCC--CceEEEEEECCCCCEEEEEEcCC-------------C------
Q 022835           92 GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQRGP-------------T------  150 (291)
Q Consensus        92 ~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dp~G~~iel~~~~~-------------~------  150 (291)
                      |...+||+|+|.+++.+.+.++|+.+..+|....+  |...++.++.+.-....+++...             .      
T Consensus        91 gvkdvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~FLPGF~~v~~~~~fp~  170 (381)
T KOG0638|consen   91 GVKDVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGPFLPGFEPVSSDALFPK  170 (381)
T ss_pred             chhceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccccccCCCCcccCccccccCC
Confidence            89999999999999999999999999988766654  33444556666555555555431             0      


Q ss_pred             -----CCCceeEeeeeC--CchhcHHHHHHhhCCeeeeeecCCCcce-----eEEEecccccccceeEeeccccCcc---
Q 022835          151 -----PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPEYKY-----TLAMLGYAEEDQTTVLELTYNYGVT---  215 (291)
Q Consensus       151 -----~~~~~hv~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~l~~~~~~~---  215 (291)
                           ..+++|+..+++  .++.+.+||.+.|||..-+..++.+.+.     +.+.+.  ...+...+.+.++-...   
T Consensus       171 l~~~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vla--n~~esi~mpinEp~~G~k~k  248 (381)
T KOG0638|consen  171 LPKGGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLA--NYEESIKMPINEPAPGKKKK  248 (381)
T ss_pred             CCccceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHh--cCCccEEEeccCCCCCCccH
Confidence                 235899999999  5889999999999999877665433211     112222  12223334343321111   


Q ss_pred             -------ccccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCC--------------------CceEEEE
Q 022835          216 -------EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGL--------------------NTKITSF  268 (291)
Q Consensus       216 -------~~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~--------------------~~~~~~~  268 (291)
                             .+..|+|++|+++.++|+-.+++.+    +++|++++..|...-..                    ...++.=
T Consensus       249 sQIqeyv~y~gG~GvQHiaL~tedIi~Ai~~l----r~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~el~ILvD  324 (381)
T KOG0638|consen  249 SQIQEYVEYHGGAGVQHIALNTEDIIEAIRGL----RARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLEELGILVD  324 (381)
T ss_pred             HHHHHHHHhcCCCceeeeeecchHHHHHHHHH----HhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHHHcCeEEe
Confidence                   2567889999999999999999999    99999999887631000                    0122333


Q ss_pred             ECCCCceEEEecc
Q 022835          269 VDPDGWKTVLVDN  281 (291)
Q Consensus       269 ~DPdG~~ie~~~~  281 (291)
                      .|-.|.++.|+..
T Consensus       325 ~De~gyLLQIFTK  337 (381)
T KOG0638|consen  325 FDENGYLLQIFTK  337 (381)
T ss_pred             cCCCcEEeeeecc
Confidence            6777888888754

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=1.7e-17  Score=122.44  Aligned_cols=124  Identities=26%  Similarity=0.317  Sum_probs=85.3

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCc-cccCCCCceEEEEE
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT-SYDIGTGFGHFAIA   99 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~i~~~   99 (291)
                      +.+|+||+|.|+|++++.+||+++|||+.......++.......+... +...+.+......... ....+.++.|++|.
T Consensus         1 ~~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~~~~~g~~h~~~~   79 (125)
T cd08352           1 LFGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLN-GGYQLELFSFPNPPERPSYPEACGLRHLAFS   79 (125)
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecC-CCcEEEEEEcCCCCCCCCCCcCCCceEEEEE
Confidence            368999999999999999999999999987654322221112223221 2222222211211111 11234578999999


Q ss_pred             eCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835          100 TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       100 v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      |+|+++++++|+++|+++...+....++.. ++|++||+|+.|||+|
T Consensus        80 v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DP~G~~iEl~~  125 (125)
T cd08352          80 VEDIEAAVKHLKAKGVEVEPIRVDEFTGKR-FTFFYDPDGLPLELYE  125 (125)
T ss_pred             eCCHHHHHHHHHHcCCccccccccCCCceE-EEEEECCCCCEEEecC
Confidence            999999999999999998776555555554 4899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.77  E-value=9.2e-18  Score=125.76  Aligned_cols=125  Identities=20%  Similarity=0.171  Sum_probs=90.0

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      |.++.|+.|.|+|++++.+||+++||+++..+..  .   ...++...+...+..+.+.....     ...+++|++|.|
T Consensus         1 ~~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v   70 (134)
T cd08360           1 PRRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEV   70 (134)
T ss_pred             CceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEe
Confidence            4679999999999999999999999999876532  1   12334432211234455533211     135899999999


Q ss_pred             cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhHH
Q 022835          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~~  286 (291)
                      +|+++..+ +.++|+++|+++...|++++..+.+++||+||+|++|||....+..+
T Consensus        71 ~d~~~~~~-~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~~~~  125 (134)
T cd08360          71 GDIDEVML-GGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMDYVD  125 (134)
T ss_pred             CCHHHHHH-HHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEccccccC
Confidence            99776654 22444999999888887776555677999999999999998776653

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.77  E-value=9.8e-18  Score=125.90  Aligned_cols=120  Identities=19%  Similarity=0.239  Sum_probs=89.9

Q ss_pred             ceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc------cccCcceeeEE
Q 022835          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE------YTKGNAYAQVA  227 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~~~~h~~  227 (291)
                      ++|+.|.|+|++++.+||+++|||++..+....+  ....++..    ....+.+....+...      ...+.+.+|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~--~~~~~~~~----g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSED--KASYLLRQ----GDINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCc--eEEEEEEc----CCEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            5899999999999999999999999876643221  22333331    134455543221111      12345889999


Q ss_pred             EEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhh
Q 022835          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       228 f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                      |.|+|++++++++    +++|++++.+|...++ +.+.++++||||++|||++++.-
T Consensus        75 ~~V~Dvda~~~~l----~~~G~~v~~~p~~~~~-~~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          75 FRVDDAAAAYERA----VARGAKPVQEPVEEPG-ELKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             EEeCCHHHHHHHH----HHcCCeEccCceecCC-eEEEEEEeccCCcEEEEEecCCC
Confidence            9999999999999    9999999998887554 57899999999999999997754

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=4.7e-17  Score=119.16  Aligned_cols=115  Identities=45%  Similarity=0.825  Sum_probs=86.8

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCC-----------CceEEEEEecCCCCcceEEEeeecCCCccccCC
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----------EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIG   90 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~   90 (291)
                      .++.|+.|.|+|+++|++||+++|||++..+...++           +.+..+++.+++......+++.++.+..++..|
T Consensus         1 ~~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g   80 (127)
T cd08358           1 RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELG   80 (127)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCC
Confidence            368999999999999999999999999887765554           344455565544455678888877655555555


Q ss_pred             CCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835           91 TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        91 ~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      .+  |++|.|++. ++.++|+++|+.+...+.    +   +++++||||+.|||+.
T Consensus        81 ~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~----~---~~fi~DPDG~~ie~~~  126 (127)
T cd08358          81 ND--FLGITIHSK-QAVSNAKKHNWPVTEVED----G---VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CC--EEEEEEECH-HHHHHHHHCCCceecCCC----C---EEEEECCCCCEEEEec
Confidence            55  566666666 556999999998876543    2   4789999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PLN02300 lactoylglutathione lyase

Probab=99.77  E-value=1.1e-17  Score=141.32  Aligned_cols=131  Identities=48%  Similarity=0.818  Sum_probs=99.7

Q ss_pred             CCCCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEE
Q 022835          149 PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       149 ~~~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f  228 (291)
                      ....++.|+.|.|+|++++.+||+++|||++..+...++..+...++..++...+..+++...........+.+..|++|
T Consensus        20 ~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~~~g~~hia~   99 (286)
T PLN02300         20 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGI   99 (286)
T ss_pred             cccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCCCccccCCCccEEEE
Confidence            44678999999999999999999999999987664444444455555543322344566654332222334567889999


Q ss_pred             EecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          229 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      .|+|++++.+++    +++|+++...|...++++.+++||+||||++|||+++..
T Consensus       100 ~v~dvd~~~~~l----~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  150 (286)
T PLN02300        100 AVEDVAKTVELV----KAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGP  150 (286)
T ss_pred             EeCCHHHHHHHH----HHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Confidence            999999999999    999999998887766544578899999999999999764

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.76  E-value=1.8e-17  Score=125.39  Aligned_cols=121  Identities=12%  Similarity=0.122  Sum_probs=84.8

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcce-eEEEecccccccceeEeeccccCccccccCcceeeEEEE
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKY-TLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~  229 (291)
                      +.+++|++|.|+|++++.+||+++|||++..+...+++.. ...++.....  .+.+.+...       .+++++|++|.
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~--~h~~~~~~~-------~~~~~~Hiaf~   74 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK--PHDIAFVGG-------PDGKLHHFSFF   74 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC--cceEEEecC-------CCCCceEEEEE
Confidence            4579999999999999999999999999877653322221 2233432221  223333210       13478999999


Q ss_pred             ecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          230 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       230 v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      |+|+++..+.. .+++++|+++..+|.++....++++||+|||||+|||+..
T Consensus        75 v~d~~~l~~~~-~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          75 LESWEDVLKAG-DIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             cCCHHHHHHHH-HHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            99977643332 4459999998888876653346889999999999999764

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=2.1e-17  Score=122.06  Aligned_cols=119  Identities=27%  Similarity=0.419  Sum_probs=85.4

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCcc---ccCCCCceEEEEE
Q 022835           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS---YDIGTGFGHFAIA   99 (291)
Q Consensus        23 ~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~i~~~   99 (291)
                      +++||.|.|+|++++++||+++|||+.......+..++..+|+..++ +  ..+++........   .....|..|+||.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD-G--ARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC-C--cEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            57999999999999999999999999765433333444556666542 2  2344443222111   1233578999999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEE
Q 022835          100 TE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       100 v~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      |+   ++++++++|+++|+++..++...++|.+. ++++|||||.|||.
T Consensus        78 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~-~~~~DPdG~~iE~~  125 (125)
T cd07241          78 VGSKEAVDELTERLRADGYLIIGEPRTTGDGYYE-SVILDPEGNRIEIT  125 (125)
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEeCceecCCCeEE-EEEECCCCCEEEeC
Confidence            95   58999999999999988766555555544 67999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=1.2e-17  Score=126.50  Aligned_cols=122  Identities=18%  Similarity=0.244  Sum_probs=88.3

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCC-----------CcceeEEEecccccccceeEeeccccCccc----
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-----------EYKYTLAMLGYAEEDQTTVLELTYNYGVTE----  216 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----  216 (291)
                      .+++|++|.|+|++++.+||++ |||++..+....           ..+..+.++..+.  ....++|....++..    
T Consensus         2 ~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--g~~~iel~~~~~~~~~~~~   78 (142)
T cd08353           2 SRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPD--GHSRLELSKFHHPAVIADH   78 (142)
T ss_pred             ceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCC--CCceEEEEEecCCCCcCcC
Confidence            4689999999999999999998 999876543211           1123444554222  245677755322111    


Q ss_pred             ---cccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          217 ---YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       217 ---~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                         ...+.+++|++|.|+|+++++++|    +++|+++..+|...+. +.+++||+||||+.|||+|.
T Consensus        79 ~~~~~~~~g~~hia~~v~d~d~~~~~l----~~~G~~~~~~~~~~~~-~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          79 RPAPVNALGLRRVMFAVDDIDARVARL----RKHGAELVGEVVQYEN-SYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCceEEEEEeCCHHHHHHHH----HHCCCceeCCceecCC-CeEEEEEECCCCCEEEeeec
Confidence               123457889999999999999999    9999999876654433 46889999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.76  E-value=6.4e-17  Score=121.93  Aligned_cols=118  Identities=21%  Similarity=0.379  Sum_probs=87.0

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      |+.++.||.|.|+|++++.+||+++|||++..+..      ..+++..+  +.  .+.+...........+.+..|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~--g~--~l~l~~~~~~~~~~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLN--GL--WIALNEEKDIPRNEIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecC--Ce--EEEeeccCCCCCccCCCCeeEEEEE
Confidence            57899999999999999999999999999875422      23455443  22  2333322221222234467899999


Q ss_pred             eC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          100 TE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~--di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ++  |+++++++|+++|+++...+...+++.+. ++|+||+||+|||.+..
T Consensus        71 v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~~-~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         71 IEEEDFDHWYQRLKENDVNILPGRERDERDKKS-IYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             ecHHHHHHHHHHHHHCCceEcCCccccCCCceE-EEEECCCCCEEEEEeCC
Confidence            87  99999999999999987666555555444 89999999999999876

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.76  E-value=8e-17  Score=124.41  Aligned_cols=127  Identities=30%  Similarity=0.352  Sum_probs=86.6

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEe----cc--------------CCCceEEEEEecCCCCcceEEEeeecC
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKR----DV--------------PEEKYSNAFLGFGPEQSHFVVELTYNY   82 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~----~~--------------~~~~~~~~~l~~~~~~~~~~l~~~~~~   82 (291)
                      .++++||+|.|+|++++++||+++|||++..+.    ..              ....+..+++..++   ...+++....
T Consensus         2 ~~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~   78 (162)
T TIGR03645         2 PRTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFK   78 (162)
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEecc
Confidence            468999999999999999999999999886421    10              01124556665443   2224444432


Q ss_pred             CCc-cc----cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCC-ccC-CC-CceEEEEEECCCCCEEEEEEcCCC
Q 022835           83 GVT-SY----DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP-GPL-KG-GTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        83 ~~~-~~----~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~-~~~-~~-g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      ... +.    ..+.|..|+||.|+|+++++++|+++|+.+...+ ... ++ .....+|++||||++|||++....
T Consensus        79 ~~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  154 (162)
T TIGR03645        79 NQENPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSYE  154 (162)
T ss_pred             CCCCCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcChh
Confidence            211 11    1246899999999999999999999998754322 211 11 123458999999999999998753

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=4.3e-17  Score=119.37  Aligned_cols=114  Identities=32%  Similarity=0.580  Sum_probs=83.5

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCC-----------cceeEEEecccccccceeEeeccccCccccccCc
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-----------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGN  221 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~  221 (291)
                      ++.|+.|+|.|++++.+||+++|||++..+...++           +.+.++++...+...+..++|..+.+..++..|.
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~   81 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGN   81 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCC
Confidence            68999999999999999999999999877664443           3344444543222345678888766655555555


Q ss_pred             ceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          222 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       222 ~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      +  |++|.|++. ++.++|    +++|+++...|.       .++++.||||++|||+.
T Consensus        82 ~--~~hlav~~~-d~~~~l----~~~Gv~~~~~~~-------~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          82 D--FLGITIHSK-QAVSNA----KKHNWPVTEVED-------GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             C--EEEEEEECH-HHHHHH----HHCCCceecCCC-------CEEEEECCCCCEEEEec
Confidence            5  566666664 555777    999998876544       17889999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.75  E-value=4.2e-17  Score=124.86  Aligned_cols=119  Identities=26%  Similarity=0.337  Sum_probs=86.5

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccC-CCceEEEEEecCCCCcce---EEEeeecCCCccccCCCCceEEEE
Q 022835           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-EEKYSNAFLGFGPEQSHF---VVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        23 ~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~-~~~~~~~~l~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      +|+||+|.|+|++++++||+++||+++..+...+ .......|+..+++....   .+.+..       ..+.++.|+||
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ-------GPESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc-------CCCCceeEEEE
Confidence            5899999999999999999999999987654433 233456677654321100   011111       12468999999


Q ss_pred             EeCCHHHHH---HHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           99 ATEDVYKLV---ENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~di~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+|++++.   ++|+++|+++...+.....+...++|++||+|++|||....
T Consensus        74 ~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          74 EVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             EcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence            999999886   99999999987665544444445689999999999999765

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.74  E-value=1.5e-16  Score=120.27  Aligned_cols=119  Identities=17%  Similarity=0.212  Sum_probs=83.9

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCc-eEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK-YSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      .+++|+||+|.|+|++++.+||+++|||++..+...+.+. ....|+..+.. .+ .+.+...       ++.++.|+||
T Consensus         3 ~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~-~h-~~~~~~~-------~~~~~~Hiaf   73 (143)
T cd07243           3 GAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK-PH-DIAFVGG-------PDGKLHHFSF   73 (143)
T ss_pred             CCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC-cc-eEEEecC-------CCCCceEEEE
Confidence            4789999999999999999999999999986654322222 23455544322 22 2323221       1347899999


Q ss_pred             EeCCHHH---HHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835           99 ATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~di~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      .|+|+++   +.++|+++|+++...|.....+...++||+||+||.|||...
T Consensus        74 ~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          74 FLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             EcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            9999887   678999999998655443332223348999999999999764

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>PRK11478 putative lyase; Provisional

Probab=99.74  E-value=4.9e-17  Score=120.96  Aligned_cols=120  Identities=21%  Similarity=0.197  Sum_probs=81.9

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCC-cceeEEEecccccccceeEeeccccCcc---ccccCcceeeEE
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVT---EYTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~h~~  227 (291)
                      .+++|+.|.|+|++++.+||+++|||++.......+ ..+.. .+...+   +..+++.......   ......+..|++
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~~---~~~l~l~~~~~~~~~~~~~~~~g~~hi~   80 (129)
T PRK11478          5 KQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKG-DLALNG---QYVIELFSFPFPPERPSRPEACGLRHLA   80 (129)
T ss_pred             ceecEEEEEcCCHHHHHHHHHHHhCCEeccccccccccccee-eEecCC---CcEEEEEEecCCCCCCCCCCCCceeEEE
Confidence            468999999999999999999999999764321111 11111 111111   3445554321111   112234788999


Q ss_pred             EEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      |.|+|++++.+++    +++|+++...+. .+..+.+++||+||||+.|||++
T Consensus        81 f~v~d~~~~~~~l----~~~G~~~~~~~~-~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         81 FSVDDIDAAVAHL----ESHNVKCEAIRV-DPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEeCCHHHHHHHH----HHcCCeeecccc-CCCCCCEEEEEECCCCCEEEEEe
Confidence            9999999999999    999999864432 23234688999999999999986

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.74  E-value=4.3e-17  Score=125.94  Aligned_cols=126  Identities=21%  Similarity=0.225  Sum_probs=86.5

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeee----cC--------------CCcceeEEEecccccccceeEeecccc
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTV----DK--------------PEYKYTLAMLGYAEEDQTTVLELTYNY  212 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~----~~--------------~~~~~~~~~~~~~~~~~~~~l~l~~~~  212 (291)
                      +.+++|+.|.|+|++++.+||+++|||++..+.    ..              ......+.++..++   +..++|....
T Consensus         2 ~~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~   78 (162)
T TIGR03645         2 PRTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFK   78 (162)
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEecc
Confidence            356899999999999999999999999874221    10              01113445554322   3446776543


Q ss_pred             Ccccc-----ccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccC--CCC-CceEEEEECCCCceEEEecchh
Q 022835          213 GVTEY-----TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPI--PGL-NTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       213 ~~~~~-----~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~--~~~-~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      .....     ..+.|..|++|.|+|++++++++    +++|+.+..++...  ++. ..+++||+||||++|||+++..
T Consensus        79 ~~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  153 (162)
T TIGR03645        79 NQENPEDNFEYWKTGVFHFCVQDPDVEGLAERI----VAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSY  153 (162)
T ss_pred             CCCCCCcccccccccceEEEEEcCCHHHHHHHH----HHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcCh
Confidence            22111     12358899999999999999999    99998765433221  111 2378999999999999998754

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.74  E-value=1.4e-16  Score=117.40  Aligned_cols=116  Identities=26%  Similarity=0.297  Sum_probs=82.9

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEe
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v  100 (291)
                      +++|+||.|.|+|++++.+||+++|||++.....  .+   ..++..........+.+...       ...+..|++|.|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~---~~~~~~~~~~~~~~~~l~~~-------~~~~~~hiaf~v   69 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG---RVYLKAWDEFDHHSIVLREA-------DTAGLDFMGFKV   69 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc---eEEEEccCCCcccEEEeccC-------CCCCeeEEEEEe
Confidence            6899999999999999999999999999865432  11   23443322222233333221       134678999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          101 E---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .   ++++++++|+++|+++...+.....+....+||+||+||+|||++..
T Consensus        70 ~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          70 LDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             CCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            6   79999999999999987654433333223489999999999998764

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=7.2e-17  Score=119.19  Aligned_cols=119  Identities=19%  Similarity=0.264  Sum_probs=81.4

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc---cccCcceeeEEEE
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE---YTKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~h~~f~  229 (291)
                      +++|+.|.|+|++++.+||+++|||++..+......++...++..++   +..+++........   .....+..|++|.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            47899999999999999999999999765433222233344444322   34456643221111   1223478999999


Q ss_pred             ecc---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEe
Q 022835          230 TDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       230 v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~  279 (291)
                      |+|   ++++.+++    +++|+++..+|...+. +.+.++++|||||+|||.
T Consensus        78 v~~~~~v~~~~~~l----~~~g~~~~~~~~~~~~-g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          78 VGSKEAVDELTERL----RADGYLIIGEPRTTGD-GYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CCCHHHHHHHHHHH----HHCCCEEEeCceecCC-CeEEEEEECCCCCEEEeC
Confidence            965   56666666    9999999877754433 345678999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.73  E-value=2.6e-16  Score=117.83  Aligned_cols=117  Identities=23%  Similarity=0.297  Sum_probs=85.3

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeC
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~  101 (291)
                      .+|+||.|.|+|++++.+||+++||+++.....  .   ...|+..+.......+.+.....     ...++.|+||.|+
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v~   71 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEVG   71 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEeC
Confidence            589999999999999999999999999865532  1   23566543222233444433211     1358899999999


Q ss_pred             CHHHHH---HHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          102 DVYKLV---ENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 di~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |++++.   ++|+++|+++...+...+.+...++||+||+|++|||....
T Consensus        72 d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~  121 (134)
T cd08360          72 DIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADM  121 (134)
T ss_pred             CHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEccc
Confidence            888766   59999999977655444444444589999999999999754

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=99.73  E-value=4.7e-16  Score=127.96  Aligned_cols=224  Identities=17%  Similarity=0.230  Sum_probs=148.6

Q ss_pred             CCcceeEEEEEEeCCH-HHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccc--cCCCCceE
Q 022835           19 KDKRRFLHAVYRVGDL-DRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY--DIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~-~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~   95 (291)
                      +...++.+|.+.|.|. ++...++.. |||+.....-...    ...++  +++..+++.-.+.+....+  .+|++.+.
T Consensus        18 ~~~~GfeFvEf~~~d~~~~l~~l~~~-lGF~~~~~Hrsk~----v~l~r--QGdinlvvn~~~~s~a~~f~~~Hgps~~a   90 (363)
T COG3185          18 EGTDGFEFVEFAVPDPQEALGALLGQ-LGFTAVAKHRSKA----VTLYR--QGDINLVVNAEPDSFAAEFLDKHGPSACA   90 (363)
T ss_pred             CCCCceeEEEEecCCHHHHHHHHHHH-hCccccccccccc----eeEEE--eCCEEEEEcCCCcchhhHHHHhcCCchhe
Confidence            4599999999999999 555555555 9999876533221    12222  3455666544443333333  38889999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCc-----cCC----CCceEEEEEECCCC--CE--EEEEEc---C-CC---CCCce
Q 022835           96 FAIATEDVYKLVENIRAKGGNVTREPG-----PLK----GGTTHIAFVKDPDG--YI--FELIQR---G-PT---PEPLC  155 (291)
Q Consensus        96 i~~~v~di~~~~~~l~~~G~~~~~~~~-----~~~----~g~~~~~~~~dp~G--~~--iel~~~---~-~~---~~~~~  155 (291)
                      ++|+|+|...+++++++.|++....+.     ..+    -|. ..+||.|.+|  ..  .++...   . +.   ...++
T Consensus        91 ~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~gigg-sllyfvd~~~~~siyd~~f~~~~~~~~~~~~g~~~ID  169 (363)
T COG3185          91 MAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGG-SLLYFVDRYGGRSIYDVEFEPNGAQGASGGVGLTAID  169 (363)
T ss_pred             eEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCC-cEEEEeccCCCCcccccccccccccccccccCceeec
Confidence            999999999999999999995332221     111    122 2478888773  11  111111   1 11   23689


Q ss_pred             eEeeeeC--CchhcHHHHHHhhCCeeeeeecCCCc---ceeEEEecccccccceeEeeccccCccc-------cccCcce
Q 022835          156 QVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPEY---KYTLAMLGYAEEDQTTVLELTYNYGVTE-------YTKGNAY  223 (291)
Q Consensus       156 hv~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~l~~~~~~~~-------~~~~~~~  223 (291)
                      |++..|+  .++.+..||+++|||+.....+..+.   -.+.++..   ++....|.|....+..+       ...|.|+
T Consensus       170 Hl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~S---p~G~vrlplN~s~~~~sqi~efl~~y~G~GI  246 (363)
T COG3185         170 HLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVS---PCGKVRLPLNESADDKSQIGEFLREYRGEGI  246 (363)
T ss_pred             hhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEec---CCCcEEeecccCCCchhHHHHHHHHhCCCcc
Confidence            9987766  79999999999999998887664332   12333333   33345566654433332       2367799


Q ss_pred             eeEEEEecchHHHHHHHHHHHHHhCCeeccCCcc
Q 022835          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGP  257 (291)
Q Consensus       224 ~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~  257 (291)
                      +||+|.++|+.++++++    +++|+++...|..
T Consensus       247 QHIA~~T~dI~~tv~~l----r~rG~~fl~ip~t  276 (363)
T COG3185         247 QHIAFGTDDIYATVAAL----RERGVKFLPIPET  276 (363)
T ss_pred             eEEEecccHHHHHHHHH----HHcCCccCCCchh
Confidence            99999999999999999    9999999987763

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.73  E-value=3.9e-17  Score=121.20  Aligned_cols=119  Identities=30%  Similarity=0.510  Sum_probs=85.6

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCC-Cc---cc--cCCCCceEE
Q 022835           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG-VT---SY--DIGTGFGHF   96 (291)
Q Consensus        23 ~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-~~---~~--~~~~~~~~i   96 (291)
                      +|+|+.|.|+|++++.+||+++|||+.......+..+...+++..++  .  .+++..... ..   .+  ..+.+..|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~--~--~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGN--T--KVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCC--E--EEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            58999999999999999999999999876544444445566665542  2  233332211 11   11  124578899


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecC-CccCCCCceEEEEE--ECCCCCEEEEEE
Q 022835           97 AIATEDVYKLVENIRAKGGNVTRE-PGPLKGGTTHIAFV--KDPDGYIFELIQ  146 (291)
Q Consensus        97 ~~~v~di~~~~~~l~~~G~~~~~~-~~~~~~g~~~~~~~--~dp~G~~iel~~  146 (291)
                      ||.|+|+++++++|+++|+++..+ |...++|... .++  +||||++||++|
T Consensus        77 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~-~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETLKEKGVRLIDEEPRIGAGGKPV-AFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHCCCcccCCCCccCCCCCEE-EEecccccCcEEEEecC
Confidence            999999999999999999998764 5555565443 566  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.73  E-value=8.2e-17  Score=118.58  Aligned_cols=117  Identities=21%  Similarity=0.187  Sum_probs=81.2

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      +.++.|+.|.|+|++++.+||+++|||++.....  ++  ..+ +..........+.+..       ...++..|++|.|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~--~~~-~~~~~~~~~~~~~l~~-------~~~~~~~hiaf~v   69 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG--RVY-LKAWDEFDHHSIVLRE-------ADTAGLDFMGFKV   69 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc--eEE-EEccCCCcccEEEecc-------CCCCCeeEEEEEe
Confidence            4578999999999999999999999999875531  11  122 2211111223343321       1134788999999


Q ss_pred             c---chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          231 D---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~---d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      .   |++++.+++    +++|+++...|.......++.+||+|||||+|||+...+
T Consensus        70 ~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~~  121 (122)
T cd07265          70 LDDADLEKLEARL----QAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADKE  121 (122)
T ss_pred             CCHHHHHHHHHHH----HHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEecc
Confidence            8   566666666    999999887665433323578999999999999987654

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.73  E-value=8.8e-17  Score=121.08  Aligned_cols=119  Identities=12%  Similarity=0.175  Sum_probs=85.0

Q ss_pred             eeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchH
Q 022835          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       155 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~  234 (291)
                      .|+.|.|+|++++.+||+++|||++..+...     ...++........+.+.+..       ....+++|++|.|+|.+
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~~-------~~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVGP-------ASSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeecc-------CCCCceEEEEEECCCHH
Confidence            4899999999999999999999998776421     23344432221223333211       12358999999999854


Q ss_pred             HHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhHH
Q 022835          235 KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       235 ~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~~  286 (291)
                      + +.++.++++++|+++..+|++++..+.+++||+||+|++|||+-..+..+
T Consensus        69 ~-v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~~  119 (141)
T cd07258          69 D-IGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGMEEFA  119 (141)
T ss_pred             H-HHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcceec
Confidence            3 33333555999999998888876556788999999999999988765443

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=1.5e-16  Score=117.31  Aligned_cols=120  Identities=24%  Similarity=0.298  Sum_probs=83.9

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCC-cceeEEEecccccccceeEeeccccCc--c-ccccCcceeeEE
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGV--T-EYTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~--~-~~~~~~~~~h~~  227 (291)
                      .+++|+.|.|+|++++.+||+++|||+........+ ..+. +.+...+   +..+++......  . ....+.+.+|++
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~-~~~~~~~---~~~i~l~~~~~~~~~~~~~~~~g~~h~~   77 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYK-LDLLLNG---GYQLELFSFPNPPERPSYPEACGLRHLA   77 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEE-EEEecCC---CcEEEEEEcCCCCCCCCCCcCCCceEEE
Confidence            368999999999999999999999999876532222 2222 2222211   233444322111  1 112345789999


Q ss_pred             EEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      |.|+|++++.+++    +++|+++...|..... +.+++|++||+|++|||+|
T Consensus        78 ~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          78 FSVEDIEAAVKHL----KAKGVEVEPIRVDEFT-GKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EEeCCHHHHHHHH----HHcCCccccccccCCC-ceEEEEEECCCCCEEEecC
Confidence            9999999999999    9999998876543332 4578999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.72  E-value=1.6e-16  Score=122.75  Aligned_cols=122  Identities=21%  Similarity=0.227  Sum_probs=80.7

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      |.+++|++|.|+|++++.+||+++|||++.......++.....++....  ....+.+..       ..+++++|++|.|
T Consensus         1 ~~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~--~~~~i~l~~-------~~~~~~~Hiaf~v   71 (161)
T cd07256           1 PQRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKG--GVHDTALTG-------GNGPRLHHVAFWV   71 (161)
T ss_pred             CceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCC--CcceEEEec-------CCCCceeEEEEEc
Confidence            4679999999999999999999999999875543222222233343222  122333321       1235789999999


Q ss_pred             cchHHHHHHHHHHHHHhCCe--eccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          231 DDVYKSAEVVNLVTQELGGK--ITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~--~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      +|.++ +.++.++++++|+.  +...|+.+...+.+++||+|||||+|||+...
T Consensus        72 ~~~~~-v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          72 PEPHN-IIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CCHHH-HHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            97333 33333444999986  33445544433457899999999999998654

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.72  E-value=1.3e-16  Score=122.27  Aligned_cols=124  Identities=16%  Similarity=0.165  Sum_probs=89.0

Q ss_pred             CCCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCC---CcceeEEEecccccccceeEeeccccCccccccCcceeeE
Q 022835          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP---EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV  226 (291)
Q Consensus       150 ~~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~  226 (291)
                      .+.++.|+.|.|+|++++.+||+++|||++.......   +....+.++..+..  +..+.+...      ..+.+++|+
T Consensus         6 ~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~i~~~~~------~~~~g~~Hi   77 (154)
T cd07237           6 GDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGR--HHSLALAEG------PGPKRIHHL   77 (154)
T ss_pred             CCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCC--CCCEEEEcC------CCCceeEEE
Confidence            3568999999999999999999999999986643221   11234555554322  233443221      123578999


Q ss_pred             EEEecchHH---HHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhH
Q 022835          227 AISTDDVYK---SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       227 ~f~v~d~~~---~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~  285 (291)
                      +|.|+|.++   +.++|    +++|+++...|+.++..+.+++|++||+|++|||+......
T Consensus        78 af~V~d~~~l~~~~~~L----~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~~~  135 (154)
T cd07237          78 MLEVTSLDDVGRAYDRV----RARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGRTV  135 (154)
T ss_pred             EEEcCCHHHHHHHHHHH----HHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCceEc
Confidence            999988544   45555    99999999888877665678899999999999998775443

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.72  E-value=5.2e-16  Score=120.35  Aligned_cols=124  Identities=22%  Similarity=0.300  Sum_probs=87.6

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      +.+.+|+|+.|.|+|++++.+||+++|||++......+.......|+........  +.+.....    ....++.|+||
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~l~~~~~----~~~~~~~hiaf   75 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHD--VAYTRDPA----GARGRLHHLAY   75 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCcee--EEEecCCC----CCCCCceEEEE
Confidence            4689999999999999999999999999998765433333233456654332222  22222111    11236789999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+|   +++++++|+++|+++...|.....+...++|++||+|++|||++..
T Consensus        76 ~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  128 (166)
T cd09014          76 ALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGGG  128 (166)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEcC
Confidence            9985   5588899999999986665554443433589999999999999874

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.72  E-value=5.2e-16  Score=118.91  Aligned_cols=123  Identities=19%  Similarity=0.307  Sum_probs=88.6

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccC---CCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP---EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   95 (291)
                      ...++|+||.|.|+|++++.+||+++|||++......+   +.....+++..+....  .+.+...      ..+.++.|
T Consensus         5 ~~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~i~~~~~------~~~~g~~H   76 (154)
T cd07237           5 TGDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHH--SLALAEG------PGPKRIHH   76 (154)
T ss_pred             cCCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCC--CEEEEcC------CCCceeEE
Confidence            35689999999999999999999999999987653322   1133456665532222  2223222      11357899


Q ss_pred             EEEEeCCHH---HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           96 FAIATEDVY---KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        96 i~~~v~di~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      +||.|+|++   +++++|+++|+++..++...+.+....+|++||+|++|||.....
T Consensus        77 iaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~  133 (154)
T cd07237          77 LMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGR  133 (154)
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCce
Confidence            999998755   689999999999877665555444445999999999999987763

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.71  E-value=7.8e-17  Score=119.31  Aligned_cols=120  Identities=28%  Similarity=0.440  Sum_probs=83.8

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhccCCEEEEEecc--CCCceEEEEEecCCCCcceEEEeeecCCCccccC---CCCceEEE
Q 022835           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDV--PEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI---GTGFGHFA   97 (291)
Q Consensus        23 ~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~i~   97 (291)
                      +|+||+|.|+|++++.+||+++|||++......  ........++..++  ..+.+.............   +.+..|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGE--GHIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTS--SCEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccc--cceeeeeeccccccccccccccccceeEE
Confidence            689999999999999999999999999987662  22233445555443  333333333222111111   01345666


Q ss_pred             EEe---CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEE
Q 022835           98 IAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus        98 ~~v---~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel  144 (291)
                      +.+   +|+++++++|+++|+++..++.....+....+|++||+|+.|||
T Consensus        79 ~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            555   57889999999999999888776777666656899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=4.4e-16  Score=114.33  Aligned_cols=114  Identities=18%  Similarity=0.257  Sum_probs=81.1

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeee----cCCCccccCCCCceEEE
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY----NYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~i~   97 (291)
                      +++.|+.|.|+|++++.+||+++|||++.....  .  .  ..+. +  .  +.+....    .........+.+..|++
T Consensus         1 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~--~--~~~~-~--~--~~l~~~~~~~~~~~~~~~~~~~~~~~l~   69 (120)
T cd09011           1 MKFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E--N--VTFE-G--G--FALQEGYSWLEGISKADIIEKSNNFELY   69 (120)
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c--e--EEEe-c--c--ceeccchhhhccCCcccccccCCceEEE
Confidence            478999999999999999999999999864321  1  1  1111 1  1  1111100    00011112334567999


Q ss_pred             EEeCCHHHHHHHHHHcCC-eeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835           98 IATEDVYKLVENIRAKGG-NVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        98 ~~v~di~~~~~~l~~~G~-~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      |.|+|+++++++|+++|. ++..+|...++|.+. ++|+|||||+|||.++
T Consensus        70 ~~v~dvd~~~~~l~~~g~~~~~~~~~~~~~g~r~-~~~~DPdGn~iei~~~  119 (120)
T cd09011          70 FEEEDFDAFLDKLKRYDNIEYVHPIKEHPWGQRV-VRFYDPDKHIIEVGES  119 (120)
T ss_pred             EEehhhHHHHHHHHhcCCcEEecCcccCCCccEE-EEEECCCCCEEEEecc
Confidence            999999999999999985 677888888887665 8999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.70  E-value=2.3e-16  Score=117.08  Aligned_cols=119  Identities=23%  Similarity=0.355  Sum_probs=83.2

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCcc-c---c--ccCcceeeE
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-E---Y--TKGNAYAQV  226 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~---~--~~~~~~~h~  226 (291)
                      +++|+.+.|+|++++.+||+++|||+........+.....+++..+    ...+++....... .   +  ..+.+..|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG----NTKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC----CEEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            4789999999999999999999999987653322223344555432    2345554321111 1   0  124577899


Q ss_pred             EEEecchHHHHHHHHHHHHHhCCeeccC-CccCCCCCceEEEE--ECCCCceEEEec
Q 022835          227 AISTDDVYKSAEVVNLVTQELGGKITRQ-PGPIPGLNTKITSF--VDPDGWKTVLVD  280 (291)
Q Consensus       227 ~f~v~d~~~~~~~l~~~~~~~G~~~~~~-p~~~~~~~~~~~~~--~DPdG~~ie~~~  280 (291)
                      +|.|+|++++.+++    +++|+++..+ |...++ +.+..|+  +||||+.|||+|
T Consensus        77 ~~~v~di~~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETL----KEKGVRLIDEEPRIGAG-GKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHH----HHCCCcccCCCCccCCC-CCEEEEecccccCcEEEEecC
Confidence            99999999999999    9999998875 443333 3455566  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.70  E-value=4e-16  Score=113.40  Aligned_cols=114  Identities=25%  Similarity=0.263  Sum_probs=82.8

Q ss_pred             ceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecch
Q 022835          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~  233 (291)
                      +.|+.|.|+|++++++||+++||+++..... .+..+  .++..++   ...+.+.......  .......|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~--~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDY--AVFSTGG---GAVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCce--EEEEeCC---ccEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            4799999999999999999999999875542 12223  3333222   1122222211111  1234668999999999


Q ss_pred             HHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      +++.+++    +++|+++..+|...++ +++.+|++|||||.|+|++
T Consensus        73 ~~~~~~l----~~~g~~~~~~~~~~~~-~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARV----EAAGGKVLVPPTDIPG-VGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHH----HHCCCEEEeCCcccCC-cEEEEEEECCCCCEEEeEC
Confidence            9999999    9999999988887664 4589999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.70  E-value=1.2e-15  Score=113.76  Aligned_cols=116  Identities=27%  Similarity=0.386  Sum_probs=86.2

Q ss_pred             EEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCCHH
Q 022835           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVY  104 (291)
Q Consensus        25 ~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~di~  104 (291)
                      +||.|.|+|++++.+||+++||+++......+ +....+|+..++.  ...+.+....      ...++.|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~------~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDED--HHDLALFPGP------ERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCC--cceEEEEcCC------CCCCeeEEEEEcCCHH
Confidence            59999999999999999999999987665433 3334566665432  2233333321      1457889999998875


Q ss_pred             ---HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835          105 ---KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       105 ---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                         +++++|+++|+++...+...+.+...+++|+||+|++|||.+...
T Consensus        72 ~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          72 DILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             HHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence               788999999999887665555444445899999999999998764

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=9.2e-16  Score=112.07  Aligned_cols=117  Identities=24%  Similarity=0.335  Sum_probs=82.7

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCc--cccCCCCceEEEEEeCCH
Q 022835           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT--SYDIGTGFGHFAIATEDV  103 (291)
Q Consensus        26 hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~i~~~v~di  103 (291)
                      ||.|.|.|++++.+||+++|||++..+..... ......+....+ ....+.+.......  ......+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS-PETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC-CeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            89999999999999999999999987654222 222233332211 13344444332221  112345678999999999


Q ss_pred             HHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835          104 YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      ++++++|+++|+++..++...+++  ..++++||+|++|||++
T Consensus        79 ~~~~~~l~~~g~~~~~~~~~~~~~--~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEELKARGVEFSEEPREMPYG--TVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHhCCCEEeeccccCCCc--eEEEEECCCCCEEEEeC
Confidence            999999999999998877444443  34899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.69  E-value=1.3e-15  Score=110.64  Aligned_cols=114  Identities=24%  Similarity=0.233  Sum_probs=81.8

Q ss_pred             eEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCCH
Q 022835           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDV  103 (291)
Q Consensus        24 i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~di  103 (291)
                      +.|+.|.|+|++++.+||+++||+++..... +...  .+++..++ .  ..+.+.......  .......|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~--~~~~~~~~-~--~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGD--YAVFSTGG-G--AVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCc--eEEEEeCC-c--cEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            4799999999999999999999999865442 1222  23444332 1  112222111111  1234567899999999


Q ss_pred             HHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835          104 YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      ++++++|+++|+++..++...+++.. .++++||+|+.|+|++
T Consensus        73 ~~~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARVEAAGGKVLVPPTDIPGVGR-FAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHCCCEEEeCCcccCCcEE-EEEEECCCCCEEEeEC
Confidence            99999999999998888877775554 5999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.69  E-value=1.6e-15  Score=111.51  Aligned_cols=115  Identities=20%  Similarity=0.284  Sum_probs=82.0

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      +.+.+|+|+.|.|+|++++.+||+++|||++..+..  .    ..++..++......+.+...       ...++.|++|
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~--~----~~~l~~~~~~~~~~~~l~~~-------~~~~~~h~af   68 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG--Q----SVYLRAWGDYEHHSLKLTES-------PEAGLGHIAW   68 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC--C----eEEEEeccCCCccEEEEeeC-------CCCceEEEEE
Confidence            458899999999999999999999999999876532  1    24454322212233333322       1347889999


Q ss_pred             EeC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           99 ATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+   ++++++++++++|+++...+.....+ . .+||+||+||.+|+....
T Consensus        69 ~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~-~-~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          69 RASSPEALERRVAALEASGLGIGWIEGDPGHG-K-AYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             EcCCHHHHHHHHHHHHHcCCccccccCCCCCc-c-eEEEECCCCCEEEEEEec
Confidence            996   58899999999999864332222223 2 489999999999998754

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=9.8e-16  Score=112.98  Aligned_cols=118  Identities=30%  Similarity=0.508  Sum_probs=83.7

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCC---ccccCCCCceEEE
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV---TSYDIGTGFGHFA   97 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~i~   97 (291)
                      +++|+|+.|.|+|++++.+||+++|||+........  .  ..++..++  .  .+.+......   .....+.+..|++
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~--~~~~~~~~--~--~~~l~~~~~~~~~~~~~~~~~~~hi~   72 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--G--RKALRFGS--Q--KINLHPVGGEFEPAAGSPGPGSDDLC   72 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC--C--ceEEEeCC--E--EEEEecCCCccCcCccCCCCCCceEE
Confidence            468999999999999999999999999987653321  1  23344332  2  2333322111   1222456789999


Q ss_pred             EEeCC-HHHHHHHHHHcCCeeecCCccCCC--CceEEEEEECCCCCEEEEEE
Q 022835           98 IATED-VYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~d-i~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dp~G~~iel~~  146 (291)
                      |.+++ +++++++|+++|+++...+....+  +....++|+||+|+++|+.+
T Consensus        73 ~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          73 LITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             EEecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            99974 999999999999998776654332  22234899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=2.3e-15  Score=110.77  Aligned_cols=117  Identities=22%  Similarity=0.283  Sum_probs=84.3

Q ss_pred             EEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCc--cccCCCCceEEEEEeCCHH
Q 022835           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT--SYDIGTGFGHFAIATEDVY  104 (291)
Q Consensus        27 v~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~i~~~v~di~  104 (291)
                      -.|.|+|++++.+||+++||+++......+.+......+.+++  ..+.+.........  ....+.+..+++|.|+|++
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d   80 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGD--GGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECC--EEEEEecCCCcccccccccCCCceEEEEEEECCHH
Confidence            4688999999999999999999987654334433334455442  22333221111111  0123346679999999999


Q ss_pred             HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835          105 KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       105 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      +++++++++|+++..++...++|.+. ++++||+||+|+|.+
T Consensus        81 ~~~~~l~~~G~~v~~~~~~~~~g~~~-~~~~DPdG~~~~l~~  121 (122)
T cd08355          81 AHYERARAAGAEILREPTDTPYGSRE-FTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHHCCCEEeeCccccCCCcEE-EEEECCCCCEEEEec
Confidence            99999999999999888888888665 889999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.69  E-value=9e-16  Score=114.39  Aligned_cols=114  Identities=23%  Similarity=0.386  Sum_probs=80.5

Q ss_pred             eEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeC--
Q 022835           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE--  101 (291)
Q Consensus        24 i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~--  101 (291)
                      |+||.|.|+|++++.+||+++|||++.....    .  ..++..+  +.  .+.+.............++.|+||.|+  
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~----~--~~~~~~~--~~--~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE----K--TAYFTIG--GT--WLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC----c--cceEeeC--ce--EEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            6899999999999999999999999864321    1  2334443  22  233332222111122346789999997  


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ++++++++|+++|+.+..++....++.+. +||+||+||+|||.+..
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~~~~~-~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVRDRKS-IYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccCcceE-EEEECCCCCEEEEecCc
Confidence            49999999999999976554444344444 89999999999999876

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.69  E-value=2.3e-15  Score=112.23  Aligned_cols=120  Identities=20%  Similarity=0.253  Sum_probs=81.7

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCc-eEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK-YSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      |+.+|+||.|.|+|++++.+||+++||++...+....... ....++..+  .  ..+.+......    ...++.|+||
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~--~--~~i~l~~~~~~----~~~~~~Hiaf   72 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIG--G--LWIAIMEGDSL----QERTYNHIAF   72 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcC--C--eEEEEecCCCC----CCCCceEEEE
Confidence            4789999999999999999999999999876553221100 001122222  1  12333322111    1236789999


Q ss_pred             EeC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           99 ATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~--di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+  ++++++++|+++|+.+..+. ....+....+||+||+||.+||....
T Consensus        73 ~v~~~~ld~~~~~l~~~gv~~~~~~-~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          73 KISDSDVDEYTERIKALGVEMKPPR-PRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             EcCHHHHHHHHHHHHHCCCEEecCC-ccccCCceEEEEECCCCCEEEEecCC
Confidence            997  79999999999999876432 33333334599999999999998754

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.68  E-value=9.2e-16  Score=113.26  Aligned_cols=114  Identities=13%  Similarity=0.184  Sum_probs=82.4

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      ++.+|.||.|.|+|++++.+||+++|||++..+..      ...|+..++.  +..+.+....        ++..|++|.
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~i~l~~~~--------~~~~~iaf~   66 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDAR--DHTLVYIEGD--------PAEQASGFE   66 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCc--cEEEEEEeCC--------CceEEEEEE
Confidence            58899999999999999999999999999864421      1356655432  2223333211        355789999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCccCC--CCceEEEEEECCCCCEEEEEEcCC
Q 022835          100 TED---VYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       100 v~d---i~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      |++   +++++++++++|+++...+....  .+...++||+|||||.||+.....
T Consensus        67 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~~  121 (124)
T cd08361          67 LRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRPS  121 (124)
T ss_pred             ECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEeee
Confidence            975   99999999999998766443211  222334789999999999987653

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.68  E-value=5.1e-16  Score=119.12  Aligned_cols=117  Identities=16%  Similarity=0.122  Sum_probs=81.2

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc-cccCcceeeEEEEec
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTD  231 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~f~v~  231 (291)
                      +++|++|.|+|++++.+||+++|||++..+..   +  .+.+...+. ..+..+.+........ .....++.|++|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            47899999999999999999999999876543   1  222222211 1245566644322111 112347889999999


Q ss_pred             c---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          232 D---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      |   ++++.+++    +++|+++.. +...+  ..+++||+||||++|||+.+.
T Consensus        75 d~~dvd~~~~~L----~~~Gv~~~~-~~~~~--~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          75 DDEELEAWKERL----EALGLPVSG-IVDRF--YFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CHHHHHHHHHHH----HHCCCCccc-ccccc--cEEEEEEECCCCcEEEEEECC
Confidence            8   66666666    999998643 33333  357899999999999999876

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=2e-15  Score=111.53  Aligned_cols=117  Identities=23%  Similarity=0.330  Sum_probs=81.2

Q ss_pred             eEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeee---c---CCC--ccccCCCCceE
Q 022835           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY---N---YGV--TSYDIGTGFGH   95 (291)
Q Consensus        24 i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~---~---~~~--~~~~~~~~~~~   95 (291)
                      +.|+.|.|+|++++.+||+++|||+......  ...+  ..+..+  ...+.+....   .   ...  .......+..+
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDY--GELETG--ETTLAFASHDLAESNLKGGFVKADPAQPPAGFE   74 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcE--EEecCC--cEEEEEEcccccccccccCccCCccccCCCcEE
Confidence            4799999999999999999999999865422  2112  112211  1122121111   0   000  11112234568


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835           96 FAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        96 i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      ++|.|+|+++++++++++|+++..++...++|... ++++||+||.++|+++
T Consensus        75 ~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~~~~~~~  125 (125)
T cd07264          75 IAFVTDDVAAAFARAVEAGAVLVSEPKEKPWGQTV-AYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEcCCHHHHHHHHHHcCCEeccCCccCCCCcEE-EEEECCCCCEEEEecC
Confidence            99999999999999999999998888888888764 8899999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.68  E-value=1.1e-15  Score=115.29  Aligned_cols=116  Identities=24%  Similarity=0.306  Sum_probs=83.1

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++||+++..+..      ...++..+    +..+.+......+....+.+..|++|.++
T Consensus         3 ~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~----g~~l~l~~~~~~~~~~~~~~~~hiaf~v~   72 (139)
T PRK04101          3 KGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLN----GLWIALNEEKDIPRNEIHQSYTHIAFSIE   72 (139)
T ss_pred             CcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecC----CeEEEeeccCCCCCccCCCCeeEEEEEec
Confidence            468999999999999999999999999875421      12233321    23344432211111122346789999997


Q ss_pred             --chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          232 --DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 --d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                        |++++++++    +++|+++...|...+. +++.+||+|||||+|||.+..
T Consensus        73 ~~dv~~~~~~l----~~~G~~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         73 EEDFDHWYQRL----KENDVNILPGRERDER-DKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             HHHHHHHHHHH----HHCCceEcCCccccCC-CceEEEEECCCCCEEEEEeCC
Confidence              888888888    9999998877766554 468999999999999997653

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.68  E-value=1e-15  Score=115.91  Aligned_cols=118  Identities=17%  Similarity=0.292  Sum_probs=83.8

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .++.|+.|.|.|++++++||+++|||++..+..  +   ...++..+..  ...+.+...       ..++..|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~--~~~~~l~~~-------~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSD--HHSIAIARG-------PHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCC--cceEEEccC-------CCCceEEEEEECC
Confidence            478999999999999999999999999865421  1   1233443322  233444321       1247889999999


Q ss_pred             chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhh
Q 022835          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                      |++++.+.+ ++++++|+++...|.....+..+++||+||+||+|||++....
T Consensus        69 d~~~l~~~~-~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~~  120 (144)
T cd07239          69 SIDEVMRGI-GRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELEQ  120 (144)
T ss_pred             CHHHHHHHH-HHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCceE
Confidence            977765322 4449999999877765443345778999999999999987554

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=9.7e-16  Score=111.95  Aligned_cols=117  Identities=23%  Similarity=0.325  Sum_probs=83.7

Q ss_pred             eEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc--cccCcceeeEEEEecch
Q 022835          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKGNAYAQVAISTDDV  233 (291)
Q Consensus       156 hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~h~~f~v~d~  233 (291)
                      |+.|.|.|++++.+||+++|||++..+....+ +..++.+...+. ....+.+........  ...+.+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS-PETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC-CeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            78999999999999999999999887654222 233444442221 133444433222111  12334678999999999


Q ss_pred             HHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      +++.+++    +++|+++..+|...++  ++.+|++||+|++|||++
T Consensus        79 ~~~~~~l----~~~g~~~~~~~~~~~~--~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEEL----KARGVEFSEEPREMPY--GTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHH----HhCCCEEeeccccCCC--ceEEEEECCCCCEEEEeC
Confidence            9999999    9999999988744433  589999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.68  E-value=1.5e-15  Score=113.32  Aligned_cols=118  Identities=25%  Similarity=0.296  Sum_probs=84.8

Q ss_pred             eeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchH
Q 022835          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       155 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~  234 (291)
                      +|+.|.|+|++++++||+++||+++......+ +.....++..++.  ...+.+....      ..++..|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~------~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDED--HHDLALFPGP------ERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCC--cceEEEEcCC------CCCCeeEEEEEcCCHH
Confidence            58999999999999999999999987654322 2223334443221  2334443311      1458899999999864


Q ss_pred             ---HHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhH
Q 022835          235 ---KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       235 ---~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~  285 (291)
                         ++.+++    +++|+++..+|...+.+..+++||+||||++|||++..+..
T Consensus        72 ~~~~~~~~l----~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~~~  121 (131)
T cd08343          72 DILRAADRL----AANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMYRI  121 (131)
T ss_pred             HHHHHHHHH----HHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCccc
Confidence               444555    99999998888766654568899999999999999887654

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.67  E-value=3.8e-15  Score=115.00  Aligned_cols=118  Identities=21%  Similarity=0.306  Sum_probs=80.1

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeC
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~  101 (291)
                      ++|+||.|.|+|++++.+||+++|||++......+.......++..++.  ...+.+...       .+.++.|+||.|+
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~--~~~i~l~~~-------~~~~~~Hiaf~v~   72 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGG--VHDTALTGG-------NGPRLHHVAFWVP   72 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCC--cceEEEecC-------CCCceeEEEEEcC
Confidence            6899999999999999999999999998654433233333445543221  122222221       2347889999997


Q ss_pred             C---HHHHHHHHHHcCCee--ecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          102 D---VYKLVENIRAKGGNV--TREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d---i~~~~~~l~~~G~~~--~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |   +++++++|+++|+..  ...|.....+...++||+||+||.|||++..
T Consensus        73 ~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          73 EPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            5   778889999999863  2223222212233489999999999998755

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.67  E-value=2e-15  Score=110.99  Aligned_cols=116  Identities=25%  Similarity=0.306  Sum_probs=81.7

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      +++++.|+.|.|+|++++.+||+++|||++.....   .   ..++..........+.+...       ...+..|++|.
T Consensus         1 ~~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~-------~~~~~~hi~~~   67 (121)
T cd07266           1 NILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD---D---RIYLRGLEEFIHHSLVLTKA-------PVAGLGHIAFR   67 (121)
T ss_pred             CcceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC---C---eEEEEecCCCceEEEEEeeC-------CCCceeEEEEE
Confidence            36899999999999999999999999999865421   1   23343211112222333221       12468899999


Q ss_pred             e---CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          100 T---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v---~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |   +++++++++++++|+++...|.....+....+|+.||+|++||++...
T Consensus        68 v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~~  119 (121)
T cd07266          68 VRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAEM  119 (121)
T ss_pred             CCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEecc
Confidence            8   579999999999999987654333333323489999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.67  E-value=1.5e-15  Score=111.69  Aligned_cols=113  Identities=19%  Similarity=0.171  Sum_probs=77.0

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++||+++..+..    .  ..++...+......+.+..       ...++..|++|.|
T Consensus         4 i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~----~--~~~l~~~~~~~~~~~~l~~-------~~~~~~~h~af~v   70 (121)
T cd09013           4 IAHLAHVELLTPKPEESLWFFTDVLGLEETGREG----Q--SVYLRAWGDYEHHSLKLTE-------SPEAGLGHIAWRA   70 (121)
T ss_pred             ccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC----C--eEEEEeccCCCccEEEEee-------CCCCceEEEEEEc
Confidence            4578999999999999999999999999876532    1  1223221211233344422       1134789999999


Q ss_pred             cc---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          231 DD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      +|   ++++.+++    +++|+++...+....  .+..+||+|||||+||++...
T Consensus        71 ~~~~~v~~~~~~l----~~~G~~~~~~~~~~~--~~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          71 SSPEALERRVAAL----EASGLGIGWIEGDPG--HGKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             CCHHHHHHHHHHH----HHcCCccccccCCCC--CcceEEEECCCCCEEEEEEec
Confidence            86   44555555    999998754333222  246789999999999998643

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.67  E-value=2.8e-15  Score=110.78  Aligned_cols=120  Identities=22%  Similarity=0.296  Sum_probs=80.7

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCC-ceEEEEEecCCCCcceEEEeeecCCCcc--ccCCCCceEEEEE
Q 022835           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYNYGVTS--YDIGTGFGHFAIA   99 (291)
Q Consensus        23 ~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~i~~~   99 (291)
                      +|+||.|.|.|++++.+||+++|||+...+....+. .....++..........+.+........  .....+..|+||.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            578999999999999999999999998776543221 1122333322111223344443322111  1223467899999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEE
Q 022835          100 TE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       100 v~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      |+   ++++++++++++|+++..++..  ++. ..++|+||+|++|||+
T Consensus        81 v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~-~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERLRAAGVPVSGVVDH--FGE-RSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHHHHcCCcccceEee--cce-EEEEEECCCCCEEEeC
Confidence            97   5799999999999997654332  333 3489999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.67  E-value=1.2e-15  Score=113.68  Aligned_cols=115  Identities=23%  Similarity=0.257  Sum_probs=79.3

Q ss_pred             ceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecc-
Q 022835          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD-  232 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d-  232 (291)
                      ++|+.|.|+|++++.+||+++||+++....   +. ..  .+..+    +..+.+....+.+......++.|++|.|++ 
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~---~~-~~--~~~~~----~~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLG---EK-TA--YFTIG----GTWLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccC---Cc-cc--eEeeC----ceEEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            589999999999999999999999976431   11 11  12221    234444332221111123467899999985 


Q ss_pred             -hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          233 -VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       233 -~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                       ++++.+++    +++|+++..+|..... +.+.+||+|||||+|||.+...
T Consensus        71 dld~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~f~DPdG~~iEl~~~~~  117 (131)
T cd08363          71 EFDAFYTRL----KEAGVNILPGRKRDVR-DRKSIYFTDPDGHKLEVHTGTL  117 (131)
T ss_pred             HHHHHHHHH----HHcCCcccCCCccccC-cceEEEEECCCCCEEEEecCcH
Confidence             77777777    9999998765544333 3588999999999999988764

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.67  E-value=2.3e-15  Score=116.76  Aligned_cols=121  Identities=20%  Similarity=0.192  Sum_probs=83.0

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      ..+++|+.|.|+|++++.+||+++|||++........+.....++...+  ....+.+.....    ....+++|++|.|
T Consensus         4 i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~~----~~~~~~~hiaf~v   77 (166)
T cd09014           4 VRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSN--KVHDVAYTRDPA----GARGRLHHLAYAL   77 (166)
T ss_pred             cceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCC--CceeEEEecCCC----CCCCCceEEEEEC
Confidence            3478999999999999999999999999876643332222223343322  122333322111    1223679999999


Q ss_pred             cchH---HHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          231 DDVY---KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~d~~---~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      +|.+   ++.+++    ++.|+++...|..+......++|++|||||+|||++.
T Consensus        78 ~~~~~l~~~~~~l----~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          78 DTREDVLRAADIF----LENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             CCHHHHHHHHHHH----HHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            9744   444555    9999998877776554344579999999999999987

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>PRK06724 hypothetical protein; Provisional

Probab=99.67  E-value=3.8e-15  Score=110.18  Aligned_cols=113  Identities=19%  Similarity=0.250  Sum_probs=77.7

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhcc---CCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECF---GMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~l---G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   95 (291)
                      .+..+|+||.|.|+|++++.+||+++|   |++........            .+...+  .+......  .....+..|
T Consensus         3 ~~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~~~------------~g~~~l--~l~~~~~~--~~~~~g~~h   66 (128)
T PRK06724          3 TLRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVAYS------------TGESEI--YFKEVDEE--IVRTLGPRH   66 (128)
T ss_pred             ccCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEeee------------CCCeeE--EEecCCcc--ccCCCCcee
Confidence            367899999999999999999999966   66653211111            111111  11111100  112346789


Q ss_pred             EEEEe---CCHHHHHHHHHHcCCeeecCCccCC---CCceEEEEEECCCCCEEEEEEcC
Q 022835           96 FAIAT---EDVYKLVENIRAKGGNVTREPGPLK---GGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v---~di~~~~~~l~~~G~~~~~~~~~~~---~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +||.|   +++++++++|+++|+++..+|...+   +|. ..++|+||||+.|||...+
T Consensus        67 ~af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~-~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         67 ICYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGY-YTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             EEEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCE-EEEEEECCCCCEEEEEeCC
Confidence            99998   7899999999999999877765543   333 3488999999999998764

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=6.4e-15  Score=108.83  Aligned_cols=117  Identities=26%  Similarity=0.398  Sum_probs=84.2

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCC-ccccCCCCceEEEEEe
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TSYDIGTGFGHFAIAT  100 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~i~~~v  100 (291)
                      ++|+||.|.|+|++++.+||+++|||++.....      ..+++..++  ....+.+...... .......+..|++|.|
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v   72 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILL   72 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEEC
Confidence            589999999999999999999999999976522      135555433  2333444443322 1223445788999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835          101 E---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       101 ~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .   ++++++++|+++|+++..+. ..+.+  ..+||+||+||++||....+
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~~-~~~~~--~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          73 PSRADLAAALRRLIELGIPLVGAS-DHLVS--EALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             CCHHHHHHHHHHHHHcCCceeccc-cccce--eEEEEECCCCCEEEEEEecC
Confidence            6   58999999999999875432 22332  34899999999999987764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.66  E-value=4e-16  Score=115.48  Aligned_cols=120  Identities=23%  Similarity=0.248  Sum_probs=78.3

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecC--CCcceeEEEecccccccceeEeeccccCcccccc---CcceeeEE
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDK--PEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK---GNAYAQVA  227 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~---~~~~~h~~  227 (291)
                      +++|+++.|.|++++.+||+++||+++......  .........+..+.  ....+.............   ..+..|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGE--GHIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTS--SCEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccc--cceeeeeeccccccccccccccccceeEE
Confidence            478999999999999999999999999987651  22223334444322  222222222111111111   01345666


Q ss_pred             EEecc---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEE
Q 022835          228 ISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       228 f~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~  278 (291)
                      |.+.+   ++++.++|    ++.|+++..+|.........++||+||+|++|||
T Consensus        79 ~~~~~~~dl~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERL----KAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHH----HHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHH----hhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            66665   55555555    9999999999887766555667899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.66  E-value=5.5e-15  Score=108.98  Aligned_cols=112  Identities=19%  Similarity=0.310  Sum_probs=80.5

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      |..++.|+.|.|+|++++.+||+++|||+.....    +.  ..++..++ .  ..+.+....      ...+..|++|.
T Consensus         1 ~~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~--~~~~~~~~-~--~~l~~~~~~------~~~~~~h~a~~   65 (123)
T cd08351           1 MTVTLNHTIVPARDREASAEFYAEILGLPWAKPF----GP--FAVVKLDN-G--VSLDFAQPD------GEIPPQHYAFL   65 (123)
T ss_pred             CcceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CC--EEEEEcCC-C--cEEEEecCC------CCCCcceEEEE
Confidence            3578999999999999999999999999986522    11  12233222 2  234333321      11245789988


Q ss_pred             eC--CHHHHHHHHHHcCCeeecCCccC-------CCCceEEEEEECCCCCEEEEEEc
Q 022835          100 TE--DVYKLVENIRAKGGNVTREPGPL-------KGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       100 v~--di~~~~~~l~~~G~~~~~~~~~~-------~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      ++  |+++++++|+++|+++...|...       .+|.+ .++|+||+||.|||++.
T Consensus        66 v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~-~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          66 VSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGR-GVYFLDPDGHLLEIITR  121 (123)
T ss_pred             eCHHHHHHHHHHHHHcCCceecCCcccccccccCCCCee-EEEEECCCCCEEEEEec
Confidence            86  69999999999999987665443       34444 49999999999999986

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.66  E-value=4.8e-15  Score=112.16  Aligned_cols=114  Identities=20%  Similarity=0.407  Sum_probs=82.8

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeC
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~  101 (291)
                      .+++||.|.|+|++++.+||+++|||++.....  .   ...|+..++...  .+.+...       ...++.|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~~~--~~~l~~~-------~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSDHH--SIAIARG-------PHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCCcc--eEEEccC-------CCCceEEEEEECC
Confidence            489999999999999999999999999864422  1   235665543322  2333221       1246889999999


Q ss_pred             CHHHHH---HHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835          102 DVYKLV---ENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       102 di~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      |++++.   ++|+++|+++...+.....+...++||+||+|+.+||++...
T Consensus        69 d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          69 SIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             CHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence            887765   899999999876554333333345899999999999998864

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.66  E-value=5.2e-15  Score=113.52  Aligned_cols=117  Identities=18%  Similarity=0.193  Sum_probs=82.2

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCcc-ccCCCCceEEEEEeC
Q 022835           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS-YDIGTGFGHFAIATE  101 (291)
Q Consensus        23 ~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~i~~~v~  101 (291)
                      +|+||.|.|+|++++.+||+++|||++..+..   .  ...+...+. ..+..+.+........ .....++.|+||.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            57999999999999999999999999876543   1  233333221 2234455544322211 122346889999998


Q ss_pred             C---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          102 D---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |   +++++++|+++|+.+.. +....  ....+||+||+|+.|||+...
T Consensus        75 d~~dvd~~~~~L~~~Gv~~~~-~~~~~--~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          75 DDEELEAWKERLEALGLPVSG-IVDRF--YFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CHHHHHHHHHHHHHCCCCccc-ccccc--cEEEEEEECCCCcEEEEEECC
Confidence            8   89999999999997543 22222  234589999999999999876

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=1.6e-15  Score=111.35  Aligned_cols=113  Identities=19%  Similarity=0.278  Sum_probs=79.7

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeecc----ccCccccccCcceeeEEE
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTY----NYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~----~~~~~~~~~~~~~~h~~f  228 (291)
                      ++.++.|.|.|++++.+||+++||+++.....  .  . .. +..     +..+.+..    .........+.+..|++|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~--~-~~-~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~   70 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E--N-VT-FEG-----GFALQEGYSWLEGISKADIIEKSNNFELYF   70 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c--e-EE-Eec-----cceeccchhhhccCCcccccccCCceEEEE
Confidence            57889999999999999999999999764321  1  1 11 110     11111100    000111122345689999


Q ss_pred             EecchHHHHHHHHHHHHHhCC-eeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          229 STDDVYKSAEVVNLVTQELGG-KITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       229 ~v~d~~~~~~~l~~~~~~~G~-~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      .|+|++++++++    +++|+ +++.+|...++ +.+.+||+|||||+|||.+.
T Consensus        71 ~v~dvd~~~~~l----~~~g~~~~~~~~~~~~~-g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          71 EEEDFDAFLDKL----KRYDNIEYVHPIKEHPW-GQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             EehhhHHHHHHH----HhcCCcEEecCcccCCC-ccEEEEEECCCCCEEEEecc
Confidence            999999999999    99986 78888887776 46899999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.66  E-value=5e-15  Score=108.03  Aligned_cols=112  Identities=26%  Similarity=0.437  Sum_probs=84.9

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeC
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~  101 (291)
                      ++++|+.|.|+|++++.+||+++|||++.....      ...++..+. ...+.+.+....       ..+..|++|.|.
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~-------~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSE-DDHHSLVLTEGD-------EPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCC-CCcEEEEEEeCC-------CCCceeEEEEcC
Confidence            579999999999999999999999999876542      135555442 223334343321       246789999996


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          102 ---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 ---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                         ++++++++++++|+++...+...+++... +++.||+|+++|++...
T Consensus        67 ~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~-~~~~DP~G~~ie~~~~~  115 (117)
T cd07240          67 SEEDLEALAAHLEAAGVAPEEASDPEPGVGRG-LRFQDPDGHLLELFVEA  115 (117)
T ss_pred             CHHHHHHHHHHHHHcCCceEEcCccCCCCceE-EEEECCCCCEEEEEEcc
Confidence               68999999999999988776555554444 89999999999998764

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=1.7e-15  Score=109.60  Aligned_cols=113  Identities=26%  Similarity=0.338  Sum_probs=80.2

Q ss_pred             eEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCcc-ccCCCCceEEEEEeCC
Q 022835           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS-YDIGTGFGHFAIATED  102 (291)
Q Consensus        24 i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~i~~~v~d  102 (291)
                      |+|+.|.|+|++++.+||+++||+++..+...+   ....++..++.   ..+.+........ ...+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~---~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGDG---PQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCCC---cEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            589999999999999999999999986543322   12345554432   1233332221111 1233467899999999


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEE
Q 022835          103 VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus       103 i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel  144 (291)
                      +++++++++++|+++..++.. .++.. .+++.||+|+++||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~-~~~~~-~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVP-GDGVR-QLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCC-CCCcc-EEEEECCCCCEEeC
Confidence            999999999999998876654 33444 38999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=5e-15  Score=108.97  Aligned_cols=117  Identities=20%  Similarity=0.182  Sum_probs=82.4

Q ss_pred             eEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc----cccCcceeeEEEEec
Q 022835          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE----YTKGNAYAQVAISTD  231 (291)
Q Consensus       156 hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~h~~f~v~  231 (291)
                      ...|.|+|++++.+||+++||+++.......++......+..++    ..+.+........    ....++..|++|.|+
T Consensus         2 ~p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~   77 (122)
T cd08355           2 WPTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGD----GGVMVGSVRDDYRASSARAGGAGTQGVYVVVD   77 (122)
T ss_pred             eEEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECC----EEEEEecCCCcccccccccCCCceEEEEEEEC
Confidence            35689999999999999999999887653333332222333221    2233322111111    112346789999999


Q ss_pred             chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      |++++.+++    +++|+++..+|...++ +.+.++++|||||+|+|.++
T Consensus        78 d~d~~~~~l----~~~G~~v~~~~~~~~~-g~~~~~~~DPdG~~~~l~~~  122 (122)
T cd08355          78 DVDAHYERA----RAAGAEILREPTDTPY-GSREFTARDPEGNLWTFGTY  122 (122)
T ss_pred             CHHHHHHHH----HHCCCEEeeCccccCC-CcEEEEEECCCCCEEEEecC
Confidence            999999999    9999999988887775 46889999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=5e-15  Score=108.43  Aligned_cols=111  Identities=22%  Similarity=0.255  Sum_probs=79.5

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCC--c---cccCCCCceEEEEEe
Q 022835           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV--T---SYDIGTGFGHFAIAT  100 (291)
Q Consensus        26 hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~--~---~~~~~~~~~~i~~~v  100 (291)
                      +..|.|+|++++.+||+++|||++.....    .  ...+..++.  .+.+.+......  .   ....+.+ .|++|.|
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~v   74 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD----W--YVSLRSPDG--GVELAFMLPGHETVPAAQYQFQGQG-LILNFEV   74 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC----c--EEEEecCCC--ceEEEEccCCCCCCcchhcccCCce-EEEEEEE
Confidence            67899999999999999999999875421    1  233333222  233333322111  1   1112333 4899999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835          101 EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       101 ~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      +|+++++++++++|+++..++...++|.+. ++++||+|++|||+|
T Consensus        75 ~did~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DP~G~~ie~~~  119 (119)
T cd08359          75 DDVDAEYERLKAEGLPIVLPLRDEPWGQRH-FIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CCHHHHHHHHHhcCCCeeeccccCCCcceE-EEEECCCCCEEEEEC
Confidence            999999999999999988888777777554 889999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=7e-15  Score=108.05  Aligned_cols=115  Identities=23%  Similarity=0.237  Sum_probs=84.6

Q ss_pred             EEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCC--ccccCCCCceEEEEEeCCHH
Q 022835           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV--TSYDIGTGFGHFAIATEDVY  104 (291)
Q Consensus        27 v~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~i~~~v~di~  104 (291)
                      ..|.|+|++++.+||+++||+++......+.+......+..++  .  .+.+......  .....+.+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~--~--~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGD--S--VLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECC--E--EEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            4688999999999999999999987755444444444455443  2  2333321111  11123446779999999999


Q ss_pred             HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835          105 KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       105 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      ++++++.+.|+++..++...++|.+. ++++||+|++|+|.+
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DP~G~~~~l~~  121 (122)
T cd07246          81 ATFARAVAAGATSVMPPADQFWGDRY-GGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHHHCCCeEecCcccccccceE-EEEECCCCCEEEEec
Confidence            99999999999998888777777654 899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=3.2e-15  Score=110.22  Aligned_cols=118  Identities=22%  Similarity=0.327  Sum_probs=82.8

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCc---cccccCcceeeEEE
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV---TEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~h~~f  228 (291)
                      .++.|+.|.|+|++++++||+++||++...+....  .+..  +..++    ..+.+......   .....+.+..|++|
T Consensus         2 ~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~~~~--~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~hi~~   73 (125)
T cd07253           2 KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--GRKA--LRFGS----QKINLHPVGGEFEPAAGSPGPGSDDLCL   73 (125)
T ss_pred             cccceEEEEecCHHHHHHHHHHHhCceeecccccC--CceE--EEeCC----EEEEEecCCCccCcCccCCCCCCceEEE
Confidence            46899999999999999999999999987653211  1222  22211    33444322111   11123457899999


Q ss_pred             Eecc-hHHHHHHHHHHHHHhCCeeccCCccCCC--CCceEEEEECCCCceEEEecc
Q 022835          229 STDD-VYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       229 ~v~d-~~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      .+++ ++++.+++    .++|+++...|....+  ..++.+||+||||++||+++.
T Consensus        74 ~~~~~~~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          74 ITEPPIDELVAHL----EAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             EecccHHHHHHHH----HHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            9985 88888888    9999999887765432  235789999999999999873

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK06724 hypothetical protein; Provisional

Probab=99.65  E-value=2.4e-15  Score=111.30  Aligned_cols=111  Identities=19%  Similarity=0.218  Sum_probs=74.4

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhh---CCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEE
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKAL---GMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f  228 (291)
                      .+++|+.|.|+|++++.+||+++|   |+++........+...+++...              ..  ......+..|++|
T Consensus         6 ~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~~~~g~~~l~l~~~--------------~~--~~~~~~g~~h~af   69 (128)
T PRK06724          6 AGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVAYSTGESEIYFKEV--------------DE--EIVRTLGPRHICY   69 (128)
T ss_pred             cccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEeeeCCCeeEEEecC--------------Cc--cccCCCCceeEEE
Confidence            469999999999999999999966   6665322111111111211110              00  0011346789999


Q ss_pred             Ee---cchHHHHHHHHHHHHHhCCeeccCCccCCC--CCceEEEEECCCCceEEEecch
Q 022835          229 ST---DDVYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       229 ~v---~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      .|   ++++++.+++    +++|+++..+|...+.  .+.+.+||+|||||.|||+..+
T Consensus        70 ~v~~~~dvd~~~~~l----~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         70 QAINRKVVDEVAEFL----SSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             ecCChHHHHHHHHHH----HHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            98   5677777777    9999999888865442  3347889999999999997653

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.65  E-value=4.8e-15  Score=109.84  Aligned_cols=118  Identities=28%  Similarity=0.487  Sum_probs=83.6

Q ss_pred             eEEEEEEeCCHHHHHHHHHhccCCEEEEEeccC-CCceEEEEEecCCCCcceEEEeeecCC-Ccc-----ccCCCCceEE
Q 022835           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-EEKYSNAFLGFGPEQSHFVVELTYNYG-VTS-----YDIGTGFGHF   96 (291)
Q Consensus        24 i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~l~~~~~~~-~~~-----~~~~~~~~~i   96 (291)
                      |+||.|.|+|++++.+||+++|||+.......+ ......+++..+  .  ..+.+..+.. ...     ...+.+..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~--~--~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG--N--VQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC--C--EEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999997654432 233445666542  2  3333433221 111     1246789999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECC-C--CCEEEEEE
Q 022835           97 AIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDP-D--GYIFELIQ  146 (291)
Q Consensus        97 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp-~--G~~iel~~  146 (291)
                      +|.|+|+++++++++++|+++..++.....+... +++.|| +  |++|||++
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~-~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKR-VAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCE-EEEEecCCCceEEEEecC
Confidence            9999999999999999999988877633444444 455555 4  99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.65  E-value=4.9e-15  Score=108.74  Aligned_cols=113  Identities=17%  Similarity=0.232  Sum_probs=80.7

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeC
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~  101 (291)
                      .++.||.|.|+|++++.+||+++|||++..+..  .   ...++..++  .++.+.+....       ..+..|++|.++
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~---~~~~~~~~~--~~~~~~l~~~~-------~~~~~~~~f~v~   66 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPE--D---GALYLRMDD--RAWRIAVHPGE-------ADDLAYAGWEVA   66 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCC--C---CeEEEEccC--CceEEEEEeCC-------CCceeEEEEEEC
Confidence            378999999999999999999999998854321  1   134555432  23444443321       236779999996


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCcc--CCCCceEEEEEECCCCCEEEEEEcC
Q 022835          102 ---DVYKLVENIRAKGGNVTREPGP--LKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 ---di~~~~~~l~~~G~~~~~~~~~--~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                         |+++++++|+++|+++...+..  ...+...+++|+|||||.|||+...
T Consensus        67 ~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          67 DEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             CHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence               5889999999999998754421  1222233589999999999998765

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=1.2e-14  Score=107.91  Aligned_cols=117  Identities=21%  Similarity=0.331  Sum_probs=82.6

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhcc---CCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCcc--c-cCCCCceEE
Q 022835           23 RFLHAVYRVGDLDRTIKFYTECF---GMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS--Y-DIGTGFGHF   96 (291)
Q Consensus        23 ~i~hv~i~v~d~~~~~~FY~~~l---G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~--~-~~~~~~~~i   96 (291)
                      +|+||.|.|+|++++.+||+++|   ||++.....  ..   ..|... .+  ...+.+.......+  . ..+.++.|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~~---~~~~~~-~~--~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--DG---RSWRAG-DG--GTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--cC---ceEEec-CC--ceEEEEEecccCCCcccccCCcCeeEE
Confidence            58999999999999999999999   999876542  11   123322 12  23344443322211  1 234578899


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeeecCCccC--CCCceEEEEEECCCCCEEEEEEc
Q 022835           97 AIATE---DVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        97 ~~~v~---di~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      ||.|+   |+++++++|+++|+.+...+...  ..+....+|++||+|+++||+.+
T Consensus        73 a~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          73 AFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            99996   58999999999999988876542  22233458999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.65  E-value=1.1e-14  Score=105.74  Aligned_cols=111  Identities=22%  Similarity=0.313  Sum_probs=80.4

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEe
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v  100 (291)
                      +++++||.|.|+|++++.+||++ |||+...+..  .    ..|+..++. ....+.+...       ...++.|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~--~----~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD--D----ELYYRGYGT-DPFVYVARKG-------EKARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC--C----eEEEecCCC-ccEEEEcccC-------CcCcccEEEEEE
Confidence            57899999999999999999999 9999865432  1    245543222 2232222111       124678999999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          101 EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +|.+++.+.+++.|......+. .+++.. .++|+||+||.|||+...
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~-~~~~~~-~~~~~DPdG~~iEl~~~~  111 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLE-APGGGK-RVTLTDPDGFPVELVYGQ  111 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCC-CCCCce-EEEEECCCCCEEEEEecc
Confidence            9999999999999998765432 445444 489999999999998653

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.65  E-value=4.5e-15  Score=110.63  Aligned_cols=117  Identities=16%  Similarity=0.195  Sum_probs=78.1

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCc--ceeEEEecccccccceeEeeccccCccccccCcceeeEEEE
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~  229 (291)
                      .+++|+.|.|+|++++.+||+++||+++..+......  ....++. .+    +..+.+.....    ...++.+|++|.
T Consensus         3 ~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~----~~~i~l~~~~~----~~~~~~~Hiaf~   73 (131)
T cd08364           3 EGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFL-IG----GLWIAIMEGDS----LQERTYNHIAFK   73 (131)
T ss_pred             ccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEE-cC----CeEEEEecCCC----CCCCCceEEEEE
Confidence            4689999999999999999999999987654321110  0011111 11    23455542211    112368999999


Q ss_pred             ec--chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          230 TD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       230 v~--d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      |+  +++++.++|    +++|+++..++.. ..+.++.+||+|||||.|||....
T Consensus        74 v~~~~ld~~~~~l----~~~gv~~~~~~~~-~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          74 ISDSDVDEYTERI----KALGVEMKPPRPR-VQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             cCHHHHHHHHHHH----HHCCCEEecCCcc-ccCCceEEEEECCCCCEEEEecCC
Confidence            98  566666666    9999987644332 222468999999999999998653

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.65  E-value=2e-15  Score=110.90  Aligned_cols=114  Identities=25%  Similarity=0.210  Sum_probs=78.5

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++||+++.....    ..  +++..........+.+..       ...++..|++|.|.
T Consensus         3 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~hi~~~v~   69 (121)
T cd07266           3 LRLGHVELRVTDLEKSREFYVDVLGLVETEEDD----DR--IYLRGLEEFIHHSLVLTK-------APVAGLGHIAFRVR   69 (121)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC----Ce--EEEEecCCCceEEEEEee-------CCCCceeEEEEECC
Confidence            478999999999999999999999999875421    11  223211111123333322       11247899999995


Q ss_pred             ---chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          232 ---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 ---d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                         |++++.+++    +++|+++...|.....+..+++|+.|||||+||++...
T Consensus        70 ~~~dv~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~~  119 (121)
T cd07266          70 SEEDLDKAEAFF----QELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAEM  119 (121)
T ss_pred             CHHHHHHHHHHH----HHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEecc
Confidence               556666666    99999987765443333357899999999999998764

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=5.8e-15  Score=109.55  Aligned_cols=117  Identities=25%  Similarity=0.275  Sum_probs=82.3

Q ss_pred             CceeEeeeeCCchhcHHHHHHhh---CCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc---cccCcceeeE
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKAL---GMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE---YTKGNAYAQV  226 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~h~  226 (291)
                      +++|+.|.|.|++++.+||+++|   ||++..+..  + ...+...     ..+..+.+.......+   ...+.++.|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~-~~~~~~~-----~~~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D-GRSWRAG-----DGGTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c-CceEEec-----CCceEEEEEecccCCCcccccCCcCeeEE
Confidence            47899999999999999999999   999876542  1 1122211     1234555544322211   1234578899


Q ss_pred             EEEecc---hHHHHHHHHHHHHHhCCeeccCCccC--CCCCceEEEEECCCCceEEEecc
Q 022835          227 AISTDD---VYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       227 ~f~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~--~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      +|.|+|   ++++.+++    +++|+++...+...  ...+.+++|++||||++|||+.+
T Consensus        73 a~~v~~~~d~~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          73 AFRAPSREAVDELYARL----AKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHH----HHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            999975   66666666    99999998877753  22346889999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.64  E-value=8.9e-15  Score=110.16  Aligned_cols=114  Identities=19%  Similarity=0.251  Sum_probs=82.4

Q ss_pred             EEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCCH-
Q 022835           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDV-  103 (291)
Q Consensus        25 ~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~di-  103 (291)
                      .||.|.|+|++++.+||+++|||++..+..  .   ..+|+.......+..+.+...       ...++.|+||.|+|+ 
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~--~---~~~~l~~~~~~~~h~~~~~~~-------~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIE--D---RIVFMRCHPNPFHHTFAVGPA-------SSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeC--C---EEEEEEcCCCCCcceeeeccC-------CCCceEEEEEECCCHH
Confidence            499999999999999999999999876532  1   346665332222233322211       235899999999764 


Q ss_pred             --HHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC
Q 022835          104 --YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       104 --~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                        ++++++|+++|+++...|...+.+....+||+||+|+.|||......
T Consensus        69 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~  117 (141)
T cd07258          69 DIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGMEE  117 (141)
T ss_pred             HHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcce
Confidence              57799999999998766655443444458999999999999887643

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.64  E-value=3.6e-15  Score=110.13  Aligned_cols=120  Identities=18%  Similarity=0.209  Sum_probs=78.9

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCc-ceeEEEecccccccceeEeeccccCccc--cccCcceeeEEEE
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-KYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~h~~f~  229 (291)
                      +++|+.|.|.|++++.+||+++|||++.......+. .....++.......+..+++........  .....+..|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            378999999999999999999999998766442221 1122223221111234455543322111  1122367899999


Q ss_pred             ecc---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEe
Q 022835          230 TDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       230 v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~  279 (291)
                      |+|   ++++.+++    +++|+++...+.. .  +.+.+||+||+|++|||+
T Consensus        81 v~~~~~~~~~~~~~----~~~g~~~~~~~~~-~--~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERL----RAAGVPVSGVVDH-F--GERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHH----HHcCCcccceEee-c--ceEEEEEECCCCCEEEeC
Confidence            996   45555555    9999998764433 2  368899999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.64  E-value=1.1e-14  Score=106.69  Aligned_cols=113  Identities=25%  Similarity=0.361  Sum_probs=82.0

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEe
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v  100 (291)
                      +.+|+|+.|.|+|++++++||+++|||+......    .  ..++..++ .....+.+...       ...+..|++|.|
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~v   66 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----G--IVYLRATG-SEHHILRLRRS-------DRNRLDVVSFSV   66 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----C--EEEEECCC-CccEEEEeccC-------CCCCCceEEEEe
Confidence            4689999999999999999999999999864422    1  24454322 22233333221       123567999999


Q ss_pred             ---CCHHHHHHHHHHcCCeeecCCcc--CCCCceEEEEEECCCCCEEEEEEcC
Q 022835          101 ---EDVYKLVENIRAKGGNVTREPGP--LKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ---~di~~~~~~l~~~G~~~~~~~~~--~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                         +++++++++|+++|+++..++..  .+++.. .++|+||+||.+||+...
T Consensus        67 ~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          67 ASRADVDALARQVAARGGTVLSEPGATDDPGGGY-GFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CCHHHHHHHHHHHHHcCCceecCCcccCCCCCce-EEEEECCCCCEEEEEecc
Confidence               57899999999999998766532  344444 489999999999998765

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.64  E-value=4.5e-15  Score=109.97  Aligned_cols=118  Identities=24%  Similarity=0.357  Sum_probs=84.5

Q ss_pred             ceeEeeeeCCchhcHHHHHHhhCCeeeeeecCC-CcceeEEEecccccccceeEeeccccCcc-c-----cccCcceeeE
Q 022835          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-EYKYTLAMLGYAEEDQTTVLELTYNYGVT-E-----YTKGNAYAQV  226 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~-----~~~~~~~~h~  226 (291)
                      ++|+.|.|+|++++.+||+++|||++....... +.....+++..+    +..+++....... .     ...+.+..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999987665432 233445555532    3445554432211 1     1235688999


Q ss_pred             EEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCC---CceEEEec
Q 022835          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD---GWKTVLVD  280 (291)
Q Consensus       227 ~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPd---G~~ie~~~  280 (291)
                      +|.|+|++++++++    +++|+++..+|...+.+ ++.+++.||+   |++|||++
T Consensus        77 ~f~v~d~~~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARL----KAQGVRLLQEGPRIGAG-GKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHH----HHCCCeeeccCCCccCC-CCEEEEEecCCCceEEEEecC
Confidence            99999999999999    99999998887754443 3555555555   99999985

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=5.9e-15  Score=109.00  Aligned_cols=115  Identities=22%  Similarity=0.299  Sum_probs=79.1

Q ss_pred             ceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeecccc--------C--ccccccCcce
Q 022835          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY--------G--VTEYTKGNAY  223 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~--------~--~~~~~~~~~~  223 (291)
                      +.|+.|.|+|++++.+||+++|||++.....  ...+..  +..+    ...+.+....        .  .......++.
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDYGE--LETG----ETTLAFASHDLAESNLKGGFVKADPAQPPAG   72 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcEEE--ecCC----cEEEEEEcccccccccccCccCCccccCCCc
Confidence            4789999999999999999999999764322  111211  1110    1111111000        0  0011112344


Q ss_pred             eeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       224 ~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      .|++|.|+|++++.+++    +++|++++.+|...++ +.+.++++|||||+|||+++
T Consensus        73 ~~~~~~v~di~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          73 FEIAFVTDDVAAAFARA----VEAGAVLVSEPKEKPW-GQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEEEcCCHHHHHHHH----HHcCCEeccCCccCCC-CcEEEEEECCCCCEEEEecC
Confidence            79999999999999999    9999999988887776 45788999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=2.9e-15  Score=108.34  Aligned_cols=113  Identities=24%  Similarity=0.147  Sum_probs=79.8

Q ss_pred             ceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc-cccCcceeeEEEEecc
Q 022835          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTDD  232 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~f~v~d  232 (291)
                      ++|+.|.|+|++++.+||+++||+++..+..... ..  .++..++   ...+.+........ ...+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-~~--~~~~~~~---~~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLF-PG--AWLYAGD---GPQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCC-Cc--eEEEeCC---CcEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            5799999999999999999999999775532221 11  2232222   12344433222111 1123467899999999


Q ss_pred             hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEE
Q 022835          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~  278 (291)
                      ++++++++    +++|+++..++...  .+.+.+||+||+|++|||
T Consensus        75 ~~~~~~~l----~~~g~~~~~~~~~~--~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARL----KAAGVPYTESDVPG--DGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHH----HHcCCCcccccCCC--CCccEEEEECCCCCEEeC
Confidence            99999999    99999998877652  235789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.63  E-value=5.3e-15  Score=109.04  Aligned_cols=112  Identities=16%  Similarity=0.218  Sum_probs=79.9

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++||+++....    +.+....+.  +   +..+.+...      ....+..|++|.|+
T Consensus         3 ~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~~~~~~~--~---~~~l~~~~~------~~~~~~~h~a~~v~   67 (123)
T cd08351           3 VTLNHTIVPARDREASAEFYAEILGLPWAKPF----GPFAVVKLD--N---GVSLDFAQP------DGEIPPQHYAFLVS   67 (123)
T ss_pred             ceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCEEEEEcC--C---CcEEEEecC------CCCCCcceEEEEeC
Confidence            36799999999999999999999999976521    112222222  1   233444321      11235689999886


Q ss_pred             --chHHHHHHHHHHHHHhCCeeccCCccC------CCCCceEEEEECCCCceEEEecch
Q 022835          232 --DVYKSAEVVNLVTQELGGKITRQPGPI------PGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 --d~~~~~~~l~~~~~~~G~~~~~~p~~~------~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                        |++++.+++    +++|+++..+|...      ...+++++||+|||||+|||++++
T Consensus        68 ~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  122 (123)
T cd08351          68 EEEFDRIFARI----RERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITRP  122 (123)
T ss_pred             HHHHHHHHHHH----HHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEecc
Confidence              578888888    99999987776543      123569999999999999999873

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.63  E-value=3.9e-15  Score=109.27  Aligned_cols=112  Identities=15%  Similarity=0.166  Sum_probs=78.2

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecc
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d  232 (291)
                      ++.|+.|.|+|++++.+||+++|||++..+..   ..  ..++..++  .+..+.+...       ..++..|++|.|++
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~---~~--~~~~~~~~--~~~~~~l~~~-------~~~~~~~~~f~v~~   67 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPE---DG--ALYLRMDD--RAWRIAVHPG-------EADDLAYAGWEVAD   67 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCC---CC--eEEEEccC--CceEEEEEeC-------CCCceeEEEEEECC
Confidence            58899999999999999999999999765421   11  22333222  2344444321       12467899999976


Q ss_pred             ---hHHHHHHHHHHHHHhCCeeccCCccC--CCCCceEEEEECCCCceEEEecch
Q 022835          233 ---VYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       233 ---~~~~~~~l~~~~~~~G~~~~~~p~~~--~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                         +++.+++|    +++|+++...|...  ..+.++++||+|||||+||++...
T Consensus        68 ~~dl~~~~~~l----~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          68 EAALDALAARL----RAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             HHHHHHHHHHH----HHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence               66666666    99999988765321  222357899999999999998653

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=9.3e-15  Score=107.95  Aligned_cols=116  Identities=22%  Similarity=0.313  Sum_probs=80.3

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCc-cccccCcceeeEEEEec
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV-TEYTKGNAYAQVAISTD  231 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~~~~h~~f~v~  231 (291)
                      ++.|+.|.|+|++++.+||+++|||++....   +   ..+.+..++  ....+.+...... .......+..|++|.|+
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~---~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v~   73 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLERT---D---STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILLP   73 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEcC---C---CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEECC
Confidence            6899999999999999999999999987652   1   123344222  2344555433221 11223347889999998


Q ss_pred             c---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          232 D---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      +   ++++.+++    +++|+++.. +..++.  .+.+||+|||||+|||....+
T Consensus        74 ~~~~v~~~~~~l----~~~g~~~~~-~~~~~~--~~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          74 SRADLAAALRRL----IELGIPLVG-ASDHLV--SEALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             CHHHHHHHHHHH----HHcCCceec-cccccc--eeEEEEECCCCCEEEEEEecC
Confidence            6   55555555    999998754 333333  478999999999999998765

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.62  E-value=1e-14  Score=104.87  Aligned_cols=108  Identities=24%  Similarity=0.338  Sum_probs=75.5

Q ss_pred             EEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCCHHHHHH
Q 022835           29 YRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVE  108 (291)
Q Consensus        29 i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~di~~~~~  108 (291)
                      |.|+|++++.+||+++|||++.....    .+  ..+..+.....-...+....  .......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DY--VDFSLGFRFHDGVIEFLQFP--DPPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SE--EEEEETEEEEEEEEEEEEEE--SSSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----Ce--EEEEeccchhhhhHHHccCC--ccccCCCceeEEEEEEcCHHHHHH
Confidence            68999999999999999999987433    11  22322211000011222111  122234578899999999999999


Q ss_pred             HHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEE
Q 022835          109 NIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       109 ~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      +++++|+++..+|...++|... +++.||+||+|||+
T Consensus        73 ~l~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RLKELGAEIVTEPRDDPWGQRS-FYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHTTSEEEEEEEEETTSEEE-EEEE-TTS-EEEEE
T ss_pred             HHHHCCCeEeeCCEEcCCCeEE-EEEECCCCCEEEeC
Confidence            9999999998888888777554 89999999999986

...

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.62  E-value=4.1e-15  Score=109.79  Aligned_cols=111  Identities=18%  Similarity=0.222  Sum_probs=77.8

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++|||++..+..    .  ..++..+.  .+..+.+...        .++..|++|.|+
T Consensus         5 ~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~----~--~~~l~~~~--~~~~i~l~~~--------~~~~~~iaf~v~   68 (124)
T cd08361           5 QDIAYVRLGTRDLAGATRFATDILGLQVAERTA----K--ATYFRSDA--RDHTLVYIEG--------DPAEQASGFELR   68 (124)
T ss_pred             EEeeEEEEeeCCHHHHHHHHHhccCceeccCCC----C--eEEEEcCC--ccEEEEEEeC--------CCceEEEEEEEC
Confidence            468999999999999999999999999865421    1  22344322  2333434221        135689999998


Q ss_pred             c---hHHHHHHHHHHHHHhCCeeccCCccCC--CCCceEEEEECCCCceEEEecch
Q 022835          232 D---VYKSAEVVNLVTQELGGKITRQPGPIP--GLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 d---~~~~~~~l~~~~~~~G~~~~~~p~~~~--~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      |   ++++.+++    +++|+++..++....  ....+++||+|||||+||++..+
T Consensus        69 ~~~dv~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          69 DDDALESAATEL----EQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             CHHHHHHHHHHH----HHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            7   66666666    999999877654211  22357789999999999998654

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.62  E-value=3.7e-14  Score=106.10  Aligned_cols=120  Identities=25%  Similarity=0.410  Sum_probs=82.5

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCC
Q 022835           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED  102 (291)
Q Consensus        23 ~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d  102 (291)
                      +|+||.|.|+|++++.+||+++|||++......  .  ...++..+. .....+.+.............+..|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--G--GLVFLSRDP-DEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--C--cEEEEEecC-CCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            589999999999999999999999998755331  1  234554431 12233434333222111234578899999987


Q ss_pred             HH---HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC
Q 022835          103 VY---KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       103 i~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      ++   +++++|.++|+++...+. . ++.+ .++++||+||++||+...+.
T Consensus        76 ~~~v~~~~~~l~~~G~~~~~~~~-~-~~~~-~~~~~DP~G~~ie~~~~~~~  123 (134)
T cd08348          76 LDDLRDLYERLRAAGITPVWPVD-H-GNAW-SIYFRDPDGNRLELFVDTPW  123 (134)
T ss_pred             HHHHHHHHHHHHHCCCCccccCC-C-Ccee-EEEEECCCCCEEEEEEcCCC
Confidence            55   688999999998776432 2 2233 48999999999999987753

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=2e-14  Score=105.55  Aligned_cols=116  Identities=20%  Similarity=0.226  Sum_probs=83.0

Q ss_pred             EeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCcc--ccccCcceeeEEEEecchH
Q 022835          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT--EYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~~~~~h~~f~v~d~~  234 (291)
                      ..|.|.|++++.+||+++||+++.......++......+..++    ..+.+.......  ....+.+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGD----SVLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECC----EEEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            4589999999999999999999887654333333333333222    234443221110  1112346789999999999


Q ss_pred             HHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          235 KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       235 ~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      ++.+++    .++|+++..+|...++ +.+.++++||||++|+|.+.
T Consensus        81 ~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~~~l~~~  122 (122)
T cd07246          81 ATFARA----VAAGATSVMPPADQFW-GDRYGGVRDPFGHRWWIATH  122 (122)
T ss_pred             HHHHHH----HHCCCeEecCcccccc-cceEEEEECCCCCEEEEecC
Confidence            999999    9999999988876655 46899999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.62  E-value=1.7e-14  Score=107.97  Aligned_cols=122  Identities=20%  Similarity=0.187  Sum_probs=79.6

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecc
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d  232 (291)
                      ++.|+.|.|+|++++.+||+++||+++......  .  ...++..+. .....+.+.............+..|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--G--GLVFLSRDP-DEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--C--cEEEEEecC-CCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            478999999999999999999999998755321  1  223333221 12334444332221111223478899999998


Q ss_pred             hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      +++.. .+.+++.++|+++...+. .+  .++.+|++||+||+|||+...+
T Consensus        76 ~~~v~-~~~~~l~~~G~~~~~~~~-~~--~~~~~~~~DP~G~~ie~~~~~~  122 (134)
T cd08348          76 LDDLR-DLYERLRAAGITPVWPVD-HG--NAWSIYFRDPDGNRLELFVDTP  122 (134)
T ss_pred             HHHHH-HHHHHHHHCCCCccccCC-CC--ceeEEEEECCCCCEEEEEEcCC
Confidence            55422 222334999998876543 22  2578999999999999997654

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.60  E-value=4.2e-14  Score=120.67  Aligned_cols=120  Identities=18%  Similarity=0.273  Sum_probs=83.5

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCce-EEEEEecCCCCcceEEEeeecCCCccccCCCC-ceEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY-SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTG-FGHF   96 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~i   96 (291)
                      +.+++|+||.|.|+|++++.+||+++|||++......+.+.. ...|+..+... + .+.+...       ++.+ +.|+
T Consensus       141 ~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~-------~~~g~~~Hi  211 (303)
T TIGR03211       141 VGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNKA-H-DIAFVGD-------PEPGKLHHV  211 (303)
T ss_pred             cCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCCC-c-ccceecC-------CCCCceEEE
Confidence            457899999999999999999999999999866543333322 34455433211 1 1111111       1234 8899


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835           97 AIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        97 ~~~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      ||.|+|   +++++++|+++|+++..+|.....+...++||+||+|+++|+...
T Consensus       212 af~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  265 (303)
T TIGR03211       212 SFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFGG  265 (303)
T ss_pred             EEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEecC
Confidence            999986   556788999999998766654443333459999999999999843

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=2.4e-14  Score=104.79  Aligned_cols=113  Identities=19%  Similarity=0.175  Sum_probs=78.7

Q ss_pred             eeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCcc----ccccCcceeeEEEEe
Q 022835          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT----EYTKGNAYAQVAIST  230 (291)
Q Consensus       155 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~----~~~~~~~~~h~~f~v  230 (291)
                      .+..|.|+|++++.+||+++|||++....    ..+  ..+..++  ....+.+.......    .........|++|.|
T Consensus         3 ~~~~l~v~D~~~s~~FY~~~lG~~~~~~~----~~~--~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~v   74 (119)
T cd08359           3 LYPVIVTDDLAETADFYVRHFGFTVVFDS----DWY--VSLRSPD--GGVELAFMLPGHETVPAAQYQFQGQGLILNFEV   74 (119)
T ss_pred             ceeEEEECCHHHHHHHHHHhhCcEEEecc----CcE--EEEecCC--CceEEEEccCCCCCCcchhcccCCceEEEEEEE
Confidence            36789999999999999999999977541    112  2222211  12333332211110    011112335999999


Q ss_pred             cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      +|++++.+++    .++|+++..+|...++ +.+.++++||||++|||+|
T Consensus        75 ~did~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          75 DDVDAEYERL----KAEGLPIVLPLRDEPW-GQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CCHHHHHHHH----HhcCCCeeeccccCCC-cceEEEEECCCCCEEEEEC
Confidence            9999999999    9999998888877665 4688999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.60  E-value=2.5e-14  Score=102.86  Aligned_cols=120  Identities=27%  Similarity=0.335  Sum_probs=90.7

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      +..+.|..|.+.|++++.+||.++|||+..+.....+..+..+.... ....+ .+.-  ..   ....++..+++.|.|
T Consensus         7 ~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y~~f~~~~-~~~gG-~l~~--~~---~~~p~~~~~~iy~~v   79 (127)
T COG3324           7 KGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADG-AGAGG-GLMA--RP---GSPPGGGGWVIYFAV   79 (127)
T ss_pred             CCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCceEEEEECCC-ccccc-eecc--CC---cCCCCCCCEEEEEec
Confidence            56789999999999999999999999998877555444444443332 11122 2211  11   111225678999999


Q ss_pred             cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      +|++++++++    .++|++++.++...|+ .++.+.|.||.||+|.|.+..
T Consensus        80 ~did~~l~rv----~~~GG~V~~p~~~~p~-~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          80 DDIDATLERV----VAAGGKVLRPKTEFPG-GGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             CChHHHHHHH----HhcCCeEEecccccCC-ceEEEEEECCCCCEEEEeecC
Confidence            9999999999    9999999999998885 479999999999999998753

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.60  E-value=2.1e-14  Score=104.73  Aligned_cols=111  Identities=23%  Similarity=0.317  Sum_probs=79.9

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecc
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d  232 (291)
                      ++.|+.|.|.|++++.+||+++|||++.....    ..  .++..+.. ....+.+...       ...+..|++|.|.+
T Consensus         2 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~----~~--~~~~~~~~-~~~~~~~~~~-------~~~~~~h~~~~v~~   67 (117)
T cd07240           2 RIAYAELEVPDLERALEFYTDVLGLTVLDRDA----GS--VYLRCSED-DHHSLVLTEG-------DEPGVDALGFEVAS   67 (117)
T ss_pred             ceeEEEEecCCHHHHHHHHHhccCcEEEeecC----Ce--EEEecCCC-CcEEEEEEeC-------CCCCceeEEEEcCC
Confidence            68999999999999999999999999876531    12  23332211 2233433221       12477999999985


Q ss_pred             ---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          233 ---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       233 ---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                         ++++.+++    +++|+++...|...++ +++.+||+||+||+||++...
T Consensus        68 ~~~v~~~~~~l----~~~g~~~~~~~~~~~~-~~~~~~~~DP~G~~ie~~~~~  115 (117)
T cd07240          68 EEDLEALAAHL----EAAGVAPEEASDPEPG-VGRGLRFQDPDGHLLELFVEA  115 (117)
T ss_pred             HHHHHHHHHHH----HHcCCceEEcCccCCC-CceEEEEECCCCCEEEEEEcc
Confidence               55555555    9999999887764444 458899999999999998653

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=4.8e-14  Score=103.57  Aligned_cols=114  Identities=28%  Similarity=0.465  Sum_probs=79.5

Q ss_pred             eEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCc------cccCCCCceEEE
Q 022835           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT------SYDIGTGFGHFA   97 (291)
Q Consensus        24 i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~i~   97 (291)
                      |.||.|.|+|++++.+||+++|||++...   +.+.  ..++..++. .  .+.+.......      ......+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~---~~~~--~~~l~~~~~-~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK---EDRR--LAFFWVGGR-G--MLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec---CCCc--eEEEEcCCC-c--EEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            46899999999999999999999998754   1222  345555443 2  22222211110      111234778999


Q ss_pred             EEe--CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835           98 IAT--EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        98 ~~v--~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      |.+  +|++++++++.++|+++..++. ..++... ++|+||+|+++||++.
T Consensus        73 ~~v~~~dl~~~~~~l~~~g~~~~~~~~-~~~~~~~-~~~~DP~G~~ie~~~~  122 (122)
T cd08354          73 FAIPAEELAEWEAHLEAKGVAIESEVQ-WPRGGRS-LYFRDPDGNLLELATP  122 (122)
T ss_pred             EEcCHHHHHHHHHHHHhcCCceecccc-CCCCeeE-EEEECCCCCEEEEecC
Confidence            998  5899999999999998876554 3344444 8999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=7.2e-14  Score=101.16  Aligned_cols=108  Identities=20%  Similarity=0.300  Sum_probs=78.0

Q ss_pred             EEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCCHHHH
Q 022835           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKL  106 (291)
Q Consensus        27 v~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~di~~~  106 (291)
                      ..|.|+|++++.+||+++|||+....    .+ . ..++..++ .....+.+.....     .+....|++|.|+|++++
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~----~~-~-~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~~   71 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMD----HG-W-IATFASPQ-NMTVQVSLATEGG-----TATVVPDLSIEVDDVDAA   71 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEc----CC-c-eEEEeecC-CCCcEEEEecCCC-----CCCCCCEEEEEeCCHHHH
Confidence            46889999999999999999998643    11 1 23333222 1123333332211     122456899999999999


Q ss_pred             HHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835          107 VENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       107 ~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      +++|+++|+++..++...++|.+. +++.||+||.++|+++
T Consensus        72 ~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          72 LARAVAAGFAIVYGPTDEPWGVRR-FFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHhcCCeEecCCccCCCceEE-EEEECCCCCEEEEEEc
Confidence            999999999988877777776554 8999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.59  E-value=3.4e-14  Score=102.99  Aligned_cols=109  Identities=23%  Similarity=0.413  Sum_probs=75.4

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEe--CCH
Q 022835           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT--EDV  103 (291)
Q Consensus        26 hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v--~di  103 (291)
                      ||.|.|+|++++.+||+++|||++..+..  .    ..++..+  +  ..+.+.......  ..+.+..|++|.|  +++
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~--~----~~~~~~~--~--~~l~~~~~~~~~--~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS--K----EAYFELA--G--LWICLMEEDSLQ--GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC--c----eeEEEec--C--eEEEeccCCCcC--CCCCCccEEEEEcCHHHH
Confidence            89999999999999999999999865432  1    2333332  1  223332221111  1234678999999  579


Q ss_pred             HHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835          104 YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      ++++++++++|+++.........+.. .++++||+|+++||+..
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQGEGR-SIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccCCCce-EEEEECCCCCEEEEEeC
Confidence            99999999999997654332222333 48999999999999865

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=5.4e-14  Score=103.57  Aligned_cols=114  Identities=25%  Similarity=0.322  Sum_probs=77.0

Q ss_pred             eEEEEEEeCCHHHHHHHHHhc---cCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEe
Q 022835           24 FLHAVYRVGDLDRTIKFYTEC---FGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        24 i~hv~i~v~d~~~~~~FY~~~---lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v  100 (291)
                      +.||.|.|+|++++.+||+++   ||++...+.  .+ . . .++..+.+...+.  +........ ....+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~--~~-~-~-~~~~~~~~~~~~~--l~~~~~~~~-~~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED--GP-G-A-VGYGKGGGGPDFW--VTKPFDGEP-ATAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec--CC-c-e-eEeccCCCCceEE--EeccccCCC-CCCCCceEEEEEC
Confidence            579999999999999999998   699886543  11 1 1 2232221222333  332221111 1222457999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCccCCC--CceEEEEEECCCCCEEEEE
Q 022835          101 ED---VYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       101 ~d---i~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dp~G~~iel~  145 (291)
                      ++   ++++++++.++|+.+...|...++  .....+||+||+||.|||+
T Consensus        73 ~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            86   788999999999998877665553  2333489999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.59  E-value=3.3e-14  Score=103.15  Aligned_cols=109  Identities=17%  Similarity=0.273  Sum_probs=76.7

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .++.|+.|.|+|++++.+||++ |||++..+..  +   .. ++...+. ....+.+ ..      ...++..|++|.|+
T Consensus         2 ~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~--~---~~-~~~~~~~-~~~~~~~-~~------~~~~~~~~~af~v~   66 (113)
T cd07267           2 TDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD--D---EL-YYRGYGT-DPFVYVA-RK------GEKARFVGAAFEAA   66 (113)
T ss_pred             cEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC--C---eE-EEecCCC-ccEEEEc-cc------CCcCcccEEEEEEC
Confidence            4689999999999999999999 9999865521  1   12 2332211 1222211 11      11247889999999


Q ss_pred             chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      |.++..+.+    +.+|+.....+. .++ +++++||+|||||.|||+..
T Consensus        67 ~~~~~~~~~----~~~g~~~~~~~~-~~~-~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          67 SRADLEKAA----ALPGASVIDDLE-APG-GGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CHHHHHHHH----HcCCCeeecCCC-CCC-CceEEEEECCCCCEEEEEec
Confidence            988888888    889998765443 333 35789999999999999754

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.59  E-value=2.2e-14  Score=103.98  Aligned_cols=109  Identities=23%  Similarity=0.349  Sum_probs=73.9

Q ss_pred             eEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec--ch
Q 022835          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DV  233 (291)
Q Consensus       156 hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~--d~  233 (291)
                      |+.+.|+|++++.+||+++||+++..+..  +  ...+.++      +..+.+.......  ..+.+..|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~--~--~~~~~~~------~~~l~~~~~~~~~--~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS--K--EAYFELA------GLWICLMEEDSLQ--GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC--c--eeEEEec------CeEEEeccCCCcC--CCCCCccEEEEEcCHHHH
Confidence            78999999999999999999999865431  1  1111111      2334443221111  12346789999995  56


Q ss_pred             HHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      +++.+++    +++|+++...+...+. .++.+|++||||++|||+..
T Consensus        69 ~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERL----KALGVEMKPERPRVQG-EGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHH----HHcCCccCCCccccCC-CceEEEEECCCCCEEEEEeC
Confidence            6777777    9999998754333222 35889999999999999853

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.59  E-value=1.5e-14  Score=103.92  Aligned_cols=108  Identities=26%  Similarity=0.330  Sum_probs=75.4

Q ss_pred             eeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHHHHH
Q 022835          159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE  238 (291)
Q Consensus       159 l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~~~~  238 (291)
                      |.|+|++++.+||+++|||++.....    .+..+..+  .........+.....  ......+..|++|.|+|++++.+
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DYVDFSLG--FRFHDGVIEFLQFPD--PPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SEEEEEET--EEEEEEEEEEEEEES--SSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----CeEEEEec--cchhhhhHHHccCCc--cccCCCceeEEEEEEcCHHHHHH
Confidence            67999999999999999999887322    12222222  100011122222111  11234578999999999999999


Q ss_pred             HHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEe
Q 022835          239 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       239 ~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~  279 (291)
                      ++    +++|+++..+|...++ +.+.+++.|||||+|||+
T Consensus        73 ~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RL----KELGAEIVTEPRDDPW-GQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HH----HHTTSEEEEEEEEETT-SEEEEEEE-TTS-EEEEE
T ss_pred             HH----HHCCCeEeeCCEEcCC-CeEEEEEECCCCCEEEeC
Confidence            99    9999999888888666 468999999999999986

...

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.59  E-value=2.5e-14  Score=104.82  Aligned_cols=113  Identities=26%  Similarity=0.321  Sum_probs=79.0

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .++.|+.|.|+|++++++||+++|||++.....    ++.  ++...+ .....+.+..       ...++..|++|.|+
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~~--~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~v~   67 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GIV--YLRATG-SEHHILRLRR-------SDRNRLDVVSFSVA   67 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CEE--EEECCC-CccEEEEecc-------CCCCCCceEEEEeC
Confidence            368999999999999999999999999764421    222  233222 1233344322       11236789999995


Q ss_pred             ---chHHHHHHHHHHHHHhCCeeccCCccCC-CCCceEEEEECCCCceEEEecch
Q 022835          232 ---DVYKSAEVVNLVTQELGGKITRQPGPIP-GLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 ---d~~~~~~~l~~~~~~~G~~~~~~p~~~~-~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                         +++++.+++    +++|+++..+|.... ..+++.+||+||+||+|||+...
T Consensus        68 ~~~~l~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          68 SRADVDALARQV----AARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CHHHHHHHHHHH----HHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEecc
Confidence               566666666    999999887765322 22467899999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=3.6e-14  Score=102.75  Aligned_cols=109  Identities=20%  Similarity=0.224  Sum_probs=78.3

Q ss_pred             eEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHH
Q 022835          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~  235 (291)
                      ...|.|+|++++.+||+++|||+....    .+  ....+...+ ..+..+.+.....     .+....|++|.|+|+++
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~----~~--~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~   70 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMD----HG--WIATFASPQ-NMTVQVSLATEGG-----TATVVPDLSIEVDDVDA   70 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEc----CC--ceEEEeecC-CCCcEEEEecCCC-----CCCCCCEEEEEeCCHHH
Confidence            356899999999999999999997532    11  122232212 1233344432111     12345799999999999


Q ss_pred             HHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          236 SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      +.+++    +++|+++..+|...++ +.+.+|++||+||+|||+++
T Consensus        71 ~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          71 ALARA----VAAGFAIVYGPTDEPW-GVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHH----HhcCCeEecCCccCCC-ceEEEEEECCCCCEEEEEEc
Confidence            99999    9999999888776665 45789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.59  E-value=9.1e-14  Score=100.44  Aligned_cols=109  Identities=28%  Similarity=0.398  Sum_probs=78.3

Q ss_pred             EEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCCHHHHH
Q 022835           28 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLV  107 (291)
Q Consensus        28 ~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~di~~~~  107 (291)
                      .|.|+|++++.+||+++|||++.....  ...  ..++..+  .  ..+.+......... ...+..|++|.++|+++++
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~~--~~~~~~~--~--~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EPG--YAFLSRG--G--AQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CCc--EEEEEeC--C--EEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHHH
Confidence            689999999999999999999876543  122  2344322  2  23333332221111 3345668999999999999


Q ss_pred             HHHHHcCCe-eecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835          108 ENIRAKGGN-VTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       108 ~~l~~~G~~-~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      ++++++|+. +..++...++|... ++++||+|+.|+|+|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~g~~~-~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPWGMRE-FAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCcccEE-EEEECCCCCEEEecC
Confidence            999999998 56666666666554 889999999999975

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.58  E-value=4.5e-14  Score=103.73  Aligned_cols=109  Identities=28%  Similarity=0.468  Sum_probs=78.0

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEe--
Q 022835           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT--  100 (291)
Q Consensus        23 ~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v--  100 (291)
                      +|.||.|.|+|++++.+||+++|||++.....  .    ..++..+  ...+.+......     ....+..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~----~~~~~~~--~~~~~l~~~~~~-----~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K----GAYLEAG--DLWLCLSVDANV-----GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C----ceEEecC--CEEEEEecCCCC-----CCCCCeeeEEEEeCH
Confidence            57999999999999999999999999865432  1    2344433  222223221111     1234678999988  


Q ss_pred             CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          101 EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +|+++++++++++|+++..++..  .+  ..+||+||+||.+||.+..
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~--~~--~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTS--EG--DSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCC--Cc--cEEEEECCCCCEEEEEeCC
Confidence            57999999999999987654332  22  2489999999999999765

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.58  E-value=5.4e-14  Score=103.43  Aligned_cols=113  Identities=21%  Similarity=0.229  Sum_probs=76.7

Q ss_pred             eEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCC-----CccccCCCCceEEEE
Q 022835           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG-----VTSYDIGTGFGHFAI   98 (291)
Q Consensus        24 i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~i~~   98 (291)
                      ++||.|.|+|++++++||+. |||++......  .  ..+.+..++ +..+.  +.....     ......+.+..+++|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~--~--~~~~~~~~~-~~~l~--l~~~~~~~~~~~~~~~~~~~~~~l~~   72 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD--E--PHVEAVLPG-GVRLA--WDTVESIRSFTPGWTPTGGHRIALAF   72 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC--C--CcEEEEeCC-CEEEE--EEcccceeeecCCCCCCCCCcEEEEE
Confidence            57999999999999999976 99997543221  1  112233321 22222  211100     000112234567888


Q ss_pred             EeC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEE
Q 022835           99 ATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus        99 ~v~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      .+.   |+++++++|+++|+++..++...++|.+. ++|+||+||+|||+
T Consensus        73 ~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~iel~  121 (122)
T cd07235          73 LCETPAEVDALYAELVGAGYPGHKEPWDAPWGQRY-AIVKDPDGNLVDLF  121 (122)
T ss_pred             EcCCHHHHHHHHHHHHHCCCCcCCCCccCCCCCEE-EEEECCCCCEEEEe
Confidence            764   89999999999999988888888887664 88999999999986

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.58  E-value=4.1e-14  Score=102.28  Aligned_cols=109  Identities=25%  Similarity=0.266  Sum_probs=78.2

Q ss_pred             eeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHHHH
Q 022835          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~~~  237 (291)
                      .|.|+|++++.+||+++|||++.....  ..  ....+..+    +..+.+......... ...+..|++|.|+|++++.
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~--~~~~~~~~----~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EP--GYAFLSRG----GAQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CC--cEEEEEeC----CEEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHHH
Confidence            589999999999999999999876542  12  22333321    234444333222111 2346679999999999999


Q ss_pred             HHHHHHHHHhCCe-eccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          238 EVVNLVTQELGGK-ITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       238 ~~l~~~~~~~G~~-~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      +++    +++|++ +..++...++ +.+.++++||+|+.|||+|
T Consensus        74 ~~l----~~~G~~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AEL----KAKGADLIVYPPEDQPW-GMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHH----HHcCCcceecCccCCCc-ccEEEEEECCCCCEEEecC
Confidence            999    999998 5666665554 3588999999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=4e-14  Score=102.80  Aligned_cols=109  Identities=26%  Similarity=0.270  Sum_probs=75.2

Q ss_pred             EeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc-cccCcceeeEEEEecc---
Q 022835          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTDD---  232 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~f~v~d---  232 (291)
                      +.|.|.|++++++||+++||+++....    ..+..+...  +   +..+.+........ .....+..|++|.|+|   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~----~~~~~~~~~--~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS----PTFALFVLG--S---GVKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC----CceEEEEeC--C---CcEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            578999999999999999999976532    123222221  1   23344433222111 1123467899999987   


Q ss_pred             hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      ++++++++    .++|+++..+|...++  ++.++|+|||||+||++.
T Consensus        73 ~~~~~~~~----~~~g~~v~~~~~~~~~--g~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          73 VDALYAEW----QAKGVKIIQEPTEMDF--GYTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HHHHHHHH----HHCCCeEecCccccCC--ccEEEEECCCCCEEEeeC
Confidence            55666666    9999999988877766  367899999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=5.9e-14  Score=103.39  Aligned_cols=114  Identities=24%  Similarity=0.232  Sum_probs=75.3

Q ss_pred             ceeEeeeeCCchhcHHHHHHh---hCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          154 LCQVMLRVGDLGRSIKFYEKA---LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~---lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      +.|+.|.|+|++++.+||+++   ||+++..+.  .+ . . +.+...+  ....+.+.......+. ...+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~--~~-~-~-~~~~~~~--~~~~~~l~~~~~~~~~-~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED--GP-G-A-VGYGKGG--GGPDFWVTKPFDGEPA-TAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec--CC-c-e-eEeccCC--CCceEEEeccccCCCC-CCCCceEEEEEC
Confidence            579999999999999999998   689876442  11 1 2 2233221  1233444332211111 122457999999


Q ss_pred             cc---hHHHHHHHHHHHHHhCCeeccCCccCCC--CCceEEEEECCCCceEEEe
Q 022835          231 DD---VYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       231 ~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~ie~~  279 (291)
                      +|   ++++.+++    .++|+.+..+|...++  .+.+.+||+|||||+|||+
T Consensus        73 ~~~~~v~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAA----LAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHH----HHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            98   44444555    9999998888776553  2345789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=4.8e-14  Score=103.60  Aligned_cols=114  Identities=21%  Similarity=0.256  Sum_probs=76.6

Q ss_pred             ceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCcc------ccccCcceeeEE
Q 022835          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT------EYTKGNAYAQVA  227 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~------~~~~~~~~~h~~  227 (291)
                      +.++.|.|.|++++.+||+++|||++..+   .++.+  .++..++.   ..+.+.......      ......+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~---~~~~~--~~l~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK---EDRRL--AFFWVGGR---GMLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec---CCCce--EEEEcCCC---cEEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            46899999999999999999999998764   12222  23332221   223332211110      111234778999


Q ss_pred             EEec--chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          228 ISTD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       228 f~v~--d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      |.|+  |++++++++    .++|+++...+. .. .+++.+||+||||++||++++
T Consensus        73 ~~v~~~dl~~~~~~l----~~~g~~~~~~~~-~~-~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          73 FAIPAEELAEWEAHL----EAKGVAIESEVQ-WP-RGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             EEcCHHHHHHHHHHH----HhcCCceecccc-CC-CCeeEEEEECCCCCEEEEecC
Confidence            9995  677777777    999998876554 22 246889999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.57  E-value=5.8e-14  Score=103.18  Aligned_cols=110  Identities=29%  Similarity=0.340  Sum_probs=75.9

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe--
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST--  230 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v--  230 (291)
                      ++.|+.|.|+|++++.+||+++||+++.....  +  .  .++..++    ..+.+......   ...++..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~--~--~~~~~~~----~~~~l~~~~~~---~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K--G--AYLEAGD----LWLCLSVDANV---GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C--c--eEEecCC----EEEEEecCCCC---CCCCCeeeEEEEeCH
Confidence            47899999999999999999999999765432  1  1  1222211    22222211111   1234678999998  


Q ss_pred             cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      +|++++++++    +++|+++..++.. +   ++.+||+|||||+|||+...-
T Consensus        68 ~dl~~~~~~l----~~~G~~~~~~~~~-~---~~~~~f~DPdG~~ie~~~~~~  112 (121)
T cd07244          68 EDFASLKEKL----RQAGVKEWKENTS-E---GDSFYFLDPDGHKLELHVGSL  112 (121)
T ss_pred             HHHHHHHHHH----HHcCCcccCCCCC-C---ccEEEEECCCCCEEEEEeCCH
Confidence            4677777777    9999998665433 2   368999999999999987643

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.57  E-value=1.1e-13  Score=100.20  Aligned_cols=108  Identities=19%  Similarity=0.310  Sum_probs=73.5

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEE--EEE
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF--AIA   99 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i--~~~   99 (291)
                      ++|+||.|.|+|++++.+||+ .|||++..+.   +.   ..+...+.  ....+.+....       ..++.|+  ++.
T Consensus         1 ~~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~---~~---~~~~~~~~--~~~~~~~~~~~-------~~~~~~~~~~~~   64 (112)
T cd08344           1 HSIDHFALEVPDLEVARRFYE-AFGLDVREEG---DG---LELRTAGN--DHRWARLLEGA-------RKRLAYLSFGIF   64 (112)
T ss_pred             CceeEEEEecCCHHHHHHHHH-HhCCcEEeec---Cc---eEEEecCC--CceEEEeecCC-------CCceeeEEEEeE
Confidence            479999999999999999998 5999986542   11   22222222  22223332221       1234444  455


Q ss_pred             eCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          100 TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ++|+++++++|+++|+++...+  .+++.. .+||.||+||.|||....
T Consensus        65 ~~d~~~~~~~l~~~Gi~~~~~~--~~~~~~-~~~~~DP~Gn~iel~~~~  110 (112)
T cd08344          65 EDDFAAFARHLEAAGVALAAAP--PGADPD-GVWFRDPDGNLLQVKVAE  110 (112)
T ss_pred             hhhHHHHHHHHHHcCCceecCC--CcCCCC-EEEEECCCCCEEEEecCC
Confidence            6899999999999999987654  333333 389999999999998654

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.57  E-value=1.4e-13  Score=117.02  Aligned_cols=121  Identities=24%  Similarity=0.353  Sum_probs=84.3

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      ..+++|+||+|.|+|++++.+||+++|||++......+.+.....|+..+.. . ..+.+...       .+.+++|+||
T Consensus       132 ~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~-------~~~~~~Hiaf  202 (294)
T TIGR02295       132 VSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGG-V-HDIALTNG-------NGPRLHHIAY  202 (294)
T ss_pred             ccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCC-c-CceEeecC-------CCCceeeEEE
Confidence            4578999999999999999999999999998765443333333455533221 1 12222211       2357899999


Q ss_pred             EeCC---HHHHHHHHHHcCCe--eecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           99 ATED---VYKLVENIRAKGGN--VTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---i~~~~~~l~~~G~~--~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+|   +++++++|+++|++  +...|.....+...++|++||+|++|||....
T Consensus       203 ~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       203 WVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             EcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence            9988   55678999999987  44444333333334589999999999998754

The enzyme from Bacillus brevis contains manganese.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=7.4e-14  Score=103.03  Aligned_cols=113  Identities=26%  Similarity=0.359  Sum_probs=73.1

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCC---ccc--cCCCCceEEE--E
Q 022835           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV---TSY--DIGTGFGHFA--I   98 (291)
Q Consensus        26 hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~---~~~--~~~~~~~~i~--~   98 (291)
                      ||.|.|+|++++++||+++|||++.....    .  ...+..+  +..+.+.+......   ...  ....+..|++  +
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----T--WVDFDFF--GHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----C--ccccccc--CcEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            99999999999999999999999864321    1  1222222  22333333221100   000  1112345665  5


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCccCCC---CceEEEEEECCCCCEEEEEE
Q 022835           99 ATEDVYKLVENIRAKGGNVTREPGPLKG---GTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        99 ~v~di~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~~dp~G~~iel~~  146 (291)
                      .++|+++++++|+++|+++..+|.....   +....++++|||||.|||..
T Consensus        74 ~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            6689999999999999998876654321   22234899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.56  E-value=1.6e-13  Score=98.45  Aligned_cols=112  Identities=31%  Similarity=0.448  Sum_probs=81.1

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCCHHH
Q 022835           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYK  105 (291)
Q Consensus        26 hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~di~~  105 (291)
                      |+.|.|+|++++.+||+++||++.......  ......++..+    ...+.+...........+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            889999999999999999999998776542  11233444432    233444443322211345578899999999999


Q ss_pred             HHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEE
Q 022835          106 LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus       106 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel  144 (291)
                      ++++|.++|+.+..++....++.. .+++.||+|+.|+|
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEPWGGR-VAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCCCCcE-EEEEECCCCcEEeC
Confidence            999999999998877653334444 48999999999985

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=5.6e-14  Score=103.70  Aligned_cols=112  Identities=23%  Similarity=0.242  Sum_probs=73.4

Q ss_pred             ceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccC-----cccc--ccCcceeeE
Q 022835          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG-----VTEY--TKGNAYAQV  226 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~-----~~~~--~~~~~~~h~  226 (291)
                      +.+++|.|+|++++++||++ |||++.......+  ...+..+  +   ...+.+.....     ....  ..+.+..|+
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~--~~~~~~~--~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l   72 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK--AACMVIS--D---NIFVMLLTEDFFQTFTPKPIADTKKSTEVLI   72 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC--eEEEEEC--C---ceEEEEEcHHHHhhccCCCcccCCCCCeEEE
Confidence            36899999999999999976 9999764322222  1122121  1   22333322110     0000  123356799


Q ss_pred             EEEecc---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEe
Q 022835          227 AISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       227 ~f~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~  279 (291)
                      +|.|++   ++++.+++    +++|+++..+|...++  .+.+||+|||||+|||+
T Consensus        73 ~f~v~~~~~vd~~~~~l----~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~  122 (124)
T cd09012          73 SLSADSREEVDELVEKA----LAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVL  122 (124)
T ss_pred             EEeCCCHHHHHHHHHHH----HHCCCcccCCcccCCc--eEEEEEECCCCCEEEEE
Confidence            999985   55666666    9999999888776654  46789999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.56  E-value=1.4e-13  Score=100.95  Aligned_cols=108  Identities=23%  Similarity=0.238  Sum_probs=75.3

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCCHHH
Q 022835           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYK  105 (291)
Q Consensus        26 hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~di~~  105 (291)
                      ...|.|+|++++++||++ |||++..+...   .  ..++..+  +  ..+.+......   .+.....+++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~---~--~~~~~~~--~--~~l~l~~~~~~---~~~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA---G--YMILRRG--D--LELHFFAHPDL---DPATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC---C--EEEEEcC--C--EEEEEEecCcC---CCCCCcceEEEEeCCHHH
Confidence            457899999999999999 99998755331   1  2334333  2  23344332211   112234578999999999


Q ss_pred             HHHHHHHcCCeee-------cCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835          106 LVENIRAKGGNVT-------REPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       106 ~~~~l~~~G~~~~-------~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      ++++|+++|+++.       .++...++|.+. ++|+||+||+|+|++.
T Consensus        72 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~-~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEFRAAGLPETGSGIPRITPPEDQPWGMRE-FALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHHhCccccccCCCcccCCcCCCCceeE-EEEECCCCCEEEeecC
Confidence            9999999999742       344445566654 8999999999999875

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=8e-14  Score=102.87  Aligned_cols=113  Identities=21%  Similarity=0.224  Sum_probs=76.8

Q ss_pred             eEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCC-----Cccc--cCCCCceEE
Q 022835           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG-----VTSY--DIGTGFGHF   96 (291)
Q Consensus        24 i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-----~~~~--~~~~~~~~i   96 (291)
                      +.+|.|.|+|++++++||++ |||+.......+.    ..++..++ .  ..+.+.....     ..+.  ..+.+..|+
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~----~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l   72 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK----AACMVISD-N--IFVMLLTEDFFQTFTPKPIADTKKSTEVLI   72 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC----eEEEEECC-c--eEEEEEcHHHHhhccCCCcccCCCCCeEEE
Confidence            46899999999999999987 9999764322221    12232332 2  2233322110     0000  123356799


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835           97 AIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        97 ~~~v~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      +|.|+   ++++++++++++|+++..+|...+++ + .+||+|||||+|||+.
T Consensus        73 ~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~-~-~~~~~DPdG~~ie~~~  123 (124)
T cd09012          73 SLSADSREEVDELVEKALAAGGKEFREPQDHGFM-Y-GRSFADLDGHLWEVLW  123 (124)
T ss_pred             EEeCCCHHHHHHHHHHHHHCCCcccCCcccCCce-E-EEEEECCCCCEEEEEE
Confidence            99997   58899999999999998887776653 3 3799999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.55  E-value=8.5e-14  Score=102.07  Aligned_cols=112  Identities=21%  Similarity=0.252  Sum_probs=76.0

Q ss_pred             eeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecc--
Q 022835          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD--  232 (291)
Q Consensus       155 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d--  232 (291)
                      .|+.|.|+|++++.+||+++||++...+..   + +..+...  .  ....+.+......    ..++..|++|.|+|  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~---~-~~~~~~~--~--~~~~~~~~~~~~~----~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD---D-YAKFLLE--D--PRLNFVLNERPGA----PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC---C-eeEEEec--C--CceEEEEecCCCC----CCCCeeEEEEEeCCHH
Confidence            689999999999999999999998765421   1 2222222  1  1222333221111    11478999999998  


Q ss_pred             -hHHHHHHHHHHHHHhCCeeccCCccCC-CCCceEEEEECCCCceEEEecch
Q 022835          233 -VYKSAEVVNLVTQELGGKITRQPGPIP-GLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       233 -~~~~~~~l~~~~~~~G~~~~~~p~~~~-~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                       +++..+++    .++|+++...|.... +...+++|++||+||+|||+++.
T Consensus        71 dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARA----EAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHH----HHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             45555555    999999887665432 22357899999999999999754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.55  E-value=2.1e-13  Score=99.97  Aligned_cols=112  Identities=26%  Similarity=0.449  Sum_probs=77.4

Q ss_pred             EEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCC--
Q 022835           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED--  102 (291)
Q Consensus        25 ~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d--  102 (291)
                      .|+.|.|+|++++.+||+++||++......  .  . ..|. .++.  .+.+.+......    ...+..|++|.|++  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~--~--~-~~~~-~~~~--~~~~~~~~~~~~----~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD--D--Y-AKFL-LEDP--RLNFVLNERPGA----PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC--C--e-eEEE-ecCC--ceEEEEecCCCC----CCCCeeEEEEEeCCHH
Confidence            599999999999999999999998764421  1  1 2222 2222  233333222111    11477899999987  


Q ss_pred             -HHHHHHHHHHcCCeeecCCccCCC-CceEEEEEECCCCCEEEEEEcC
Q 022835          103 -VYKLVENIRAKGGNVTREPGPLKG-GTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       103 -i~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~~dp~G~~iel~~~~  148 (291)
                       ++++++++.++|+++...+....+ +....++++||+||.|||++..
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             788999999999998766543322 2223488999999999999754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.54  E-value=2.1e-13  Score=115.39  Aligned_cols=120  Identities=21%  Similarity=0.347  Sum_probs=83.4

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCC--C-ceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE--E-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~--~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i   96 (291)
                      ...+|+||.|.|+|++++.+||+++|||++......+.  + .+..+|+..++...  .+.+...      ....+++|+
T Consensus       139 ~~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~--~~~l~~~------~~~~~~~Hi  210 (286)
T TIGR03213       139 GDQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHH--SLAFAAG------PSEKRLNHL  210 (286)
T ss_pred             CCccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcc--eEEEecC------CCCCceEEE
Confidence            36799999999999999999999999999866532211  1 12345665443222  2222211      123578999


Q ss_pred             EEEeCCHHH---HHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           97 AIATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~di~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ||.|+|+++   ++++|+++|+ ....+...+.+...++|++||+|+++|+....
T Consensus       211 af~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~~  264 (286)
T TIGR03213       211 MLEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWGA  264 (286)
T ss_pred             EEEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecCc
Confidence            999988776   8999999999 44444333333445689999999999998743

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.54  E-value=1.2e-13  Score=100.08  Aligned_cols=107  Identities=21%  Similarity=0.224  Sum_probs=72.4

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceee--EEEEe
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQ--VAIST  230 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h--~~f~v  230 (291)
                      ++.|+.|.|+|++++.+||+ +|||++..+.   +  .. .+...+.  ....+.+...       ...+..|  +.|.+
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~---~--~~-~~~~~~~--~~~~~~~~~~-------~~~~~~~~~~~~~~   65 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEG---D--GL-ELRTAGN--DHRWARLLEG-------ARKRLAYLSFGIFE   65 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeec---C--ce-EEEecCC--CceEEEeecC-------CCCceeeEEEEeEh
Confidence            68999999999999999997 6999986542   1  11 1222111  2233333221       1123344  55566


Q ss_pred             cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      +|++++++++    +++|+++..++..  + +.+.+||+||+||+|||....
T Consensus        66 ~d~~~~~~~l----~~~Gi~~~~~~~~--~-~~~~~~~~DP~Gn~iel~~~~  110 (112)
T cd08344          66 DDFAAFARHL----EAAGVALAAAPPG--A-DPDGVWFRDPDGNLLQVKVAE  110 (112)
T ss_pred             hhHHHHHHHH----HHcCCceecCCCc--C-CCCEEEEECCCCCEEEEecCC
Confidence            8899999999    9999998776522  2 246799999999999998643

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=2.4e-13  Score=98.73  Aligned_cols=108  Identities=24%  Similarity=0.334  Sum_probs=77.4

Q ss_pred             EEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccc-cCCCCceEEEEEeCC---
Q 022835           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY-DIGTGFGHFAIATED---  102 (291)
Q Consensus        27 v~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~i~~~v~d---  102 (291)
                      +.|.|+|++++.+||+++||+++....    ..+  ..+..++ +  ..+.+......... ....+..|++|.|++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~----~~~--~~~~~~~-~--~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS----PTF--ALFVLGS-G--VKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC----Cce--EEEEeCC-C--cEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            678999999999999999999976431    122  2233222 2  23334433222111 234467899999975   


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEE
Q 022835          103 VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       103 i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      ++++++++.++|+++..++...++|+  .++|+||+||+|||+
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g~--~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFGY--TFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCcc--EEEEECCCCCEEEee
Confidence            88999999999999998888877774  378999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.54  E-value=1.1e-13  Score=99.26  Aligned_cols=112  Identities=29%  Similarity=0.371  Sum_probs=81.5

Q ss_pred             eEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHH
Q 022835          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~  235 (291)
                      |+.+.|+|++++.+||+++||+++........  .....+..+    +..+.+....+......+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~--~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGG--AEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCC--EEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            78999999999999999999999877653211  233444422    355656543322111234578999999999999


Q ss_pred             HHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEE
Q 022835          236 SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~  278 (291)
                      +.+++    .++|+.+..++... ..+.+.+|+.||+|+.|||
T Consensus        75 ~~~~l----~~~g~~~~~~~~~~-~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERL----KAAGVEVLGEPREE-PWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHH----HHcCCcccCCCcCC-CCCcEEEEEECCCCcEEeC
Confidence            99999    99999988876522 2246899999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.54  E-value=1.1e-13  Score=101.75  Aligned_cols=113  Identities=19%  Similarity=0.173  Sum_probs=73.8

Q ss_pred             ceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeecccc-----CccccccCcceeeEEE
Q 022835          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY-----GVTEYTKGNAYAQVAI  228 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~-----~~~~~~~~~~~~h~~f  228 (291)
                      ++|++|.|.|++++++||+. |||++......  ..+  ..+..++   +..+.+....     .......+.+..|++|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~--~~~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~   72 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD--EPH--VEAVLPG---GVRLAWDTVESIRSFTPGWTPTGGHRIALAF   72 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC--CCc--EEEEeCC---CEEEEEEcccceeeecCCCCCCCCCcEEEEE
Confidence            57999999999999999975 99987543211  111  1122111   1222221110     0000012234578888


Q ss_pred             Eec---chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEe
Q 022835          229 STD---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       229 ~v~---d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~  279 (291)
                      .+.   |++++.+++    +++|+++..+|...++ +.+.++|+|||||.|||+
T Consensus        73 ~~~~~~dvd~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          73 LCETPAEVDALYAEL----VGAGYPGHKEPWDAPW-GQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             EcCCHHHHHHHHHHH----HHCCCCcCCCCccCCC-CCEEEEEECCCCCEEEEe
Confidence            875   688888888    9999999888877665 458899999999999996

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.53  E-value=1.6e-13  Score=100.58  Aligned_cols=108  Identities=19%  Similarity=0.155  Sum_probs=74.7

Q ss_pred             eEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHH
Q 022835          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~  235 (291)
                      ...|.|.|++++++||++ |||++..+...   .  ++.+..+    +..+.+......   .......|++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~---~--~~~~~~~----~~~l~l~~~~~~---~~~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA---G--YMILRRG----DLELHFFAHPDL---DPATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC---C--EEEEEcC----CEEEEEEecCcC---CCCCCcceEEEEeCCHHH
Confidence            467899999999999999 99998754321   2  2333322    234444332111   111234689999999999


Q ss_pred             HHHHHHHHHHHhCCeec-------cCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          236 SAEVVNLVTQELGGKIT-------RQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~-------~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      +++++    +++|+++.       .+|...++ +.+.++|+|||||+|||.+.
T Consensus        72 ~~~~l----~~~G~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEF----RAAGLPETGSGIPRITPPEDQPW-GMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHH----HHhCccccccCCCcccCCcCCCC-ceeEEEEECCCCCEEEeecC
Confidence            99999    99999753       23333334 46889999999999999874

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.53  E-value=1.1e-13  Score=102.20  Aligned_cols=114  Identities=18%  Similarity=0.206  Sum_probs=72.5

Q ss_pred             eeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCcc---c--cccCcceeeEE--
Q 022835          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT---E--YTKGNAYAQVA--  227 (291)
Q Consensus       155 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~--~~~~~~~~h~~--  227 (291)
                      .|+.|.|+|++++++||+++||+++.....    .+  ..+...+  ....+.+.......   .  .....+..|++  
T Consensus         1 ~Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~   72 (125)
T cd08357           1 FHLAIPVRDLEAARAFYGDVLGCKEGRSSE----TW--VDFDFFG--HQLVAHLSPNFNADASDNAVDGHPVPVPHFGLI   72 (125)
T ss_pred             CeEEEEeCCHHHHHHHHHHhcCCEEeeccC----Cc--ccccccC--cEEEEEeccCCCcccccCCCCCCccCCceEEEE
Confidence            389999999999999999999999754321    11  1121111  11122221111000   0  01112445654  


Q ss_pred             EEecchHHHHHHHHHHHHHhCCeeccCCccCC---CCCceEEEEECCCCceEEEec
Q 022835          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIP---GLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~---~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      |.++|++++.++|    +++|+++..+|....   .++.+.+||+|||||+|||..
T Consensus        73 ~~~~dv~~~~~~l----~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          73 LSEEEFDALAERL----EAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             EeHHHHHHHHHHH----HHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            5668898888888    999999987776421   123588999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.52  E-value=1.7e-13  Score=98.65  Aligned_cols=95  Identities=25%  Similarity=0.304  Sum_probs=75.9

Q ss_pred             EEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccc--cCCCCceEEEEEeCC
Q 022835           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY--DIGTGFGHFAIATED  102 (291)
Q Consensus        25 ~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~i~~~v~d  102 (291)
                      +||+|.|+|++++.+||+++||++.......+..+.+..++..+++.  ..+++..+.....+  ..+.|++|+||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~--~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGP--VQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTET--EEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCc--EEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            69999999999999999999999987776666777777887766432  55676665443322  277899999999999


Q ss_pred             HHHHHHHHHHcCCeeecCC
Q 022835          103 VYKLVENIRAKGGNVTREP  121 (291)
Q Consensus       103 i~~~~~~l~~~G~~~~~~~  121 (291)
                      ++++.++|+++|+++...+
T Consensus        79 ~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHHHHTTECEEECE
T ss_pred             HHHHHHHHHHCCCEEcccC
Confidence            9999999999999977653

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.51  E-value=1.5e-12  Score=93.72  Aligned_cols=122  Identities=25%  Similarity=0.281  Sum_probs=86.8

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      .+...+.|..|.|+|++++.+||+++|||+........+  .....+..+.....=.+..     .....++.....+.|
T Consensus         5 ~~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~--~~y~~f~~~~~~~gG~l~~-----~~~~~p~~~~~~iy~   77 (127)
T COG3324           5 GEKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGE--MRYAVFPADGAGAGGGLMA-----RPGSPPGGGGWVIYF   77 (127)
T ss_pred             ccCCccEEEeeecCCHHHHHHHHHHhhCceecccccCCC--ceEEEEECCCccccceecc-----CCcCCCCCCCEEEEE
Confidence            456778999999999999999999999999976543322  2233332222111101110     111122234557788


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           99 ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+|++++.+|++++|.+++.++.+.+++.+. +.+.||+||+|.|++..
T Consensus        78 ~v~did~~l~rv~~~GG~V~~p~~~~p~~G~~-a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          78 AVDDIDATLERVVAAGGKVLRPKTEFPGGGRI-AHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             ecCChHHHHHHHHhcCCeEEecccccCCceEE-EEEECCCCCEEEEeecC
Confidence            89999999999999999999999999965554 88999999999999764

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.48  E-value=8.3e-13  Score=96.77  Aligned_cols=110  Identities=25%  Similarity=0.350  Sum_probs=75.7

Q ss_pred             EEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCC------CccccCCCCceEEEEEe
Q 022835           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG------VTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        27 v~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~i~~~v  100 (291)
                      |.|.|+|++++.+||+++|||++..+.   ..  ...++..+  .  ..+.+.....      ......+.+..++++.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~--~~~~~~~~--~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---ND--GVAFFQLG--G--LVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CC--ceEEEEcC--C--eEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            689999999999999999999986541   11  12444432  2  2333332111      11111223444566654


Q ss_pred             ---CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835          101 ---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       101 ---~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                         +|++++++++++.|+++..++...++|... ++++||+||+|||..
T Consensus        73 ~~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARAAAAGATIVKPPQDVFWGGYS-GYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHHHhCCCEEecCCccCCCCceE-EEEECCCCCEEEEee
Confidence               689999999999999998877777776554 899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.46  E-value=1e-12  Score=96.26  Aligned_cols=110  Identities=25%  Similarity=0.247  Sum_probs=73.5

Q ss_pred             EeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccC------ccccccCcceeeEEEEe
Q 022835          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG------VTEYTKGNAYAQVAIST  230 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~------~~~~~~~~~~~h~~f~v  230 (291)
                      |.|.|.|++++.+||+++|||++..+.   ...+  .++..+    +..+.+.....      ......+.+..|++|.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~~~--~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---NDGV--AFFQLG----GLVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CCce--EEEEcC----CeEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            679999999999999999999986551   1112  223321    23344432111      00011222345566665


Q ss_pred             ---cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          231 ---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       231 ---~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                         +|++++++++    +++|+++..+|...++ +++.+|++||+||+|||..
T Consensus        73 ~~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARA----AAAGATIVKPPQDVFW-GGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHH----HhCCCEEecCCccCCC-CceEEEEECCCCCEEEEee
Confidence               5677777777    9999999887776654 4688999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.46  E-value=1.2e-12  Score=94.81  Aligned_cols=104  Identities=20%  Similarity=0.289  Sum_probs=71.9

Q ss_pred             EEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCCHHHH
Q 022835           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKL  106 (291)
Q Consensus        27 v~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~di~~~  106 (291)
                      ..|.|+|++++.+||++ |||++.....    .  ..++..+  +..+.+  ......    ...+..+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~--~~~l~~~--~~~l~l--~~~~~~----~~~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND----N--LAYFRLG--NCAFYL--QDYYVK----DWAENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC----C--EEEEEcC--CEEEEe--ecCCCc----ccccCCEEEEEECCHHHH
Confidence            46789999999999998 9999976531    1  3555543  223322  221111    112235789999999999


Q ss_pred             HHHHHHcCCeee-----cCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835          107 VENIRAKGGNVT-----REPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       107 ~~~l~~~G~~~~-----~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      +++|+++|+++.     .++...++|.+. ++|+|||||+|+|.+
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~g~r~-f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPWWGRE-FFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCCCcEE-EEEECCCccEEEeeC
Confidence            999999998742     234455666655 899999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.45  E-value=1.4e-12  Score=94.59  Aligned_cols=105  Identities=20%  Similarity=0.210  Sum_probs=71.7

Q ss_pred             eEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHH
Q 022835          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~  235 (291)
                      ...|.|.|++++.+||++ |||++....   + .  ..++..+    +..+.+......    ...+..+++|.|+|+++
T Consensus         4 ~~~l~v~Dl~~s~~FY~~-LGf~~~~~~---~-~--~~~l~~~----~~~l~l~~~~~~----~~~~~~~~~~~v~did~   68 (113)
T cd08356           4 RPFIPAKDFAESKQFYQA-LGFELEWEN---D-N--LAYFRLG----NCAFYLQDYYVK----DWAENSMLHLEVDDLEA   68 (113)
T ss_pred             eeccccccHHHHHHHHHH-hCCeeEecC---C-C--EEEEEcC----CEEEEeecCCCc----ccccCCEEEEEECCHHH
Confidence            356889999999999987 999987653   1 1  2334432    223333221111    11234689999999999


Q ss_pred             HHHHHHHHHHHhCCeecc-----CCccCCCCCceEEEEECCCCceEEEec
Q 022835          236 SAEVVNLVTQELGGKITR-----QPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~-----~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      +.+++    +++|+++..     +|...++ +.+.++|+|||||+|+|.+
T Consensus        69 ~~~~l----~~~G~~~~~~~~~~~~~~~~~-g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          69 YYEHI----KALGLPKKFPGVKLPPITQPW-WGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHH----HHcCCcccccceecCccccCC-CcEEEEEECCCccEEEeeC
Confidence            99999    999987542     3333333 4699999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.44  E-value=5.8e-13  Score=95.90  Aligned_cols=96  Identities=18%  Similarity=0.206  Sum_probs=74.5

Q ss_pred             eeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc--cccCcceeeEEEEecc
Q 022835          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKGNAYAQVAISTDD  232 (291)
Q Consensus       155 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~h~~f~v~d  232 (291)
                      +|+++.|+|++++.+||+++||+++.........+....++..++.  ...++|..+.+..+  ...+.|++|++|.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~--~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDG--PVQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTE--TEEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCC--cEEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            6999999999999999999999998776555555556666654331  26788877654432  2367799999999999


Q ss_pred             hHHHHHHHHHHHHHhCCeeccCCc
Q 022835          233 VYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      ++++.+++    +++|++++..+.
T Consensus        79 ~d~~~~~l----~~~G~~~~~~~~   98 (109)
T PF13669_consen   79 LDAAIARL----EAQGFRVLDEGP   98 (109)
T ss_dssp             HHHHHHHH----HHTTECEEECEE
T ss_pred             HHHHHHHH----HHCCCEEcccCc
Confidence            99999999    999999887643

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.42  E-value=6.2e-13  Score=103.43  Aligned_cols=120  Identities=41%  Similarity=0.719  Sum_probs=101.6

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCC-----------cceeEEEecccccccceeEeeccccCcccccc
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-----------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK  219 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~  219 (291)
                      ..+.-|+.+.|.|.+++++||+++||+++.+.....+           ++++-.+++.++++++..++|++++....|..
T Consensus        15 ~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~Yel   94 (299)
T KOG2943|consen   15 TRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYEL   94 (299)
T ss_pred             chheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccceec
Confidence            4678999999999999999999999999988755443           67777888988999999999999999988999


Q ss_pred             CcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       220 ~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      |+++-|+++.++|+-..++.+    +..|.+         +.+.-.+++.||||+.|++.+..+
T Consensus        95 Gndfg~i~I~s~dv~~~ve~v----~~p~~~---------~~g~~~~~v~dPdGykF~l~~~~p  145 (299)
T KOG2943|consen   95 GNDFGGITIASDDVFSKVEKV----NAPGGK---------GSGCGIAFVKDPDGYKFYLIDRGP  145 (299)
T ss_pred             cCCcccEEEeHHHHHHHHHHh----cCcCCc---------ccceEEEEEECCCCcEEEEeccCC
Confidence            999999999999988888888    655541         123567889999999999997544

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.41  E-value=1.9e-12  Score=94.53  Aligned_cols=142  Identities=32%  Similarity=0.469  Sum_probs=83.1

Q ss_pred             CCCCcccccccccCCCCCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCC-----------
Q 022835            2 AEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE-----------   70 (291)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~-----------   70 (291)
                      +.++.+.........+ +....+.|..+.|.|+.++..||++++|+.+......++..+..++++....           
T Consensus         2 ~s~~~~~~l~~~~~~~-~~t~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~   80 (170)
T KOG2944|consen    2 ASDANALGLFSRADSS-TPTYLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVS   80 (170)
T ss_pred             CccccchhhhcccCCC-CchhhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCc
Confidence            3333444333333333 2345556777777777777777777777766554443332222222221000           


Q ss_pred             ----CcceEEEeeecCCC-----cccc----CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCce-EEEEEEC
Q 022835           71 ----QSHFVVELTYNYGV-----TSYD----IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTT-HIAFVKD  136 (291)
Q Consensus        71 ----~~~~~l~~~~~~~~-----~~~~----~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~~d  136 (291)
                          ...-.+++..+.+.     ..+.    .+.|.+||||.|+|+.+++.+|++.|+++...+.   +|.. ..+++.|
T Consensus        81 v~~~~~~~~~ELthn~Gtes~~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~---dGk~K~iaF~~d  157 (170)
T KOG2944|consen   81 VFVFSRNAKLELTHNWGTESPPDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLK---DGKMKPIAFLHD  157 (170)
T ss_pred             eEEecccCceeeecCCCCCCCcchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCC---CccccceeEEEC
Confidence                00112445544322     1121    1248999999999999999999999999654332   3332 4588999


Q ss_pred             CCCCEEEEEEc
Q 022835          137 PDGYIFELIQR  147 (291)
Q Consensus       137 p~G~~iel~~~  147 (291)
                      |||+.|||...
T Consensus       158 pDgywiei~~~  168 (170)
T KOG2944|consen  158 PDGYWIEIELE  168 (170)
T ss_pred             CCCCeEEEeec
Confidence            99999999764

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.35  E-value=1.1e-11  Score=99.28  Aligned_cols=121  Identities=21%  Similarity=0.226  Sum_probs=86.0

Q ss_pred             CCCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc-cccCcceeeEEE
Q 022835          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAI  228 (291)
Q Consensus       150 ~~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~f  228 (291)
                      .+..+..+.|.|+|++++..||++++|+++..+..      ....++.++   ...+.|....+... .+...|..|++|
T Consensus         7 ~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg---~~LL~L~q~~~a~~~~~~~aGLyH~Af   77 (265)
T COG2514           7 TPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGG---TPLLTLEQFPDARRPPPRAAGLYHTAF   77 (265)
T ss_pred             CCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCC---EEEEEEEeCCCCCCCCccccceeeeee
Confidence            35578889999999999999999999999887643      223344333   24555554333222 345679999999


Q ss_pred             EecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          229 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      .+++-.+..+.+ ..+.+.|+.+. +...+..  .-.+||.||+||-||++.+++
T Consensus        78 LlP~r~~L~~~l-~hl~~~~~~l~-Ga~DH~v--SEAlYl~DPEGNGIEiYaDrp  128 (265)
T COG2514          78 LLPTREDLARVL-NHLAEEGIPLV-GASDHLV--SEALYLEDPEGNGIEIYADRP  128 (265)
T ss_pred             ecCCHHHHHHHH-HHHHhcCCccc-ccCcchh--heeeeecCCCCCeEEEEecCC
Confidence            999744444444 33388888875 4555544  477999999999999999864

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.34  E-value=1.1e-11  Score=90.49  Aligned_cols=119  Identities=24%  Similarity=0.335  Sum_probs=78.3

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc-----cc----cCcce
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-----YT----KGNAY  223 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----~~----~~~~~  223 (291)
                      ++.+..+.+++.-+...||...||++..+..+.+......+.+.     ....++|+.+....+     +.    .+.|.
T Consensus        42 r~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~-----~~~~~ELthn~Gtes~~~~~~~ngN~~prGf  116 (170)
T KOG2944|consen   42 RVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFS-----RNAKLELTHNWGTESPPDQAYLNGNKEPRGF  116 (170)
T ss_pred             hhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEec-----ccCceeeecCCCCCCCcchhhcCCCCCCCcc
Confidence            45666666666666667776667766555544332222222222     134567765543222     22    22389


Q ss_pred             eeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       224 ~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      +||+|.|+|+.++.+++    +++|+++...|..-.  ...++++.||||++|||..+.
T Consensus       117 gHIci~V~di~sac~~l----kekGV~f~Kk~~dGk--~K~iaF~~dpDgywiei~~~s  169 (170)
T KOG2944|consen  117 GHICIEVDDINSACERL----KEKGVRFKKKLKDGK--MKPIAFLHDPDGYWIEIELES  169 (170)
T ss_pred             ceEEEEeCCHHHHHHHH----HHhCceeeecCCCcc--ccceeEEECCCCCeEEEeecC
Confidence            99999999999999999    999999766555422  247899999999999997653

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.32  E-value=2.2e-11  Score=96.46  Aligned_cols=100  Identities=24%  Similarity=0.388  Sum_probs=73.4

Q ss_pred             cceeEEEEEEeC--CHHHHHHHHHhccCCEEEEEeccCC--CceEEEEEecCCCCcceEEEeeecCC--C-c---c---c
Q 022835           21 KRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPE--EKYSNAFLGFGPEQSHFVVELTYNYG--V-T---S---Y   87 (291)
Q Consensus        21 ~~~i~hv~i~v~--d~~~~~~FY~~~lG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~l~~~~~~~--~-~---~---~   87 (291)
                      +.+|+||++.|+  |++++.+||+++|||+.......++  .+.....+..++  ..+.+++..+..  . .   .   .
T Consensus         1 ~~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~--g~i~l~L~~~~~~~~~s~~~~fl~~   78 (191)
T cd07250           1 LTRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPD--GKIRIPLNEPASGKRKSQIQEFLEY   78 (191)
T ss_pred             CceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCC--CcEEEEEecCCCCCCccHHHHHHHH
Confidence            368999999999  9999999999999999887655433  334444554332  334455544322  1 1   1   1


Q ss_pred             cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCc
Q 022835           88 DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPG  122 (291)
Q Consensus        88 ~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~  122 (291)
                      ..|.|+.|+||.|+|+++++++|+++|+++..+|.
T Consensus        79 ~~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~  113 (191)
T cd07250          79 YGGAGVQHIALATDDIFATVAALRARGVEFLPIPD  113 (191)
T ss_pred             hCCCceeEEEEECCCHHHHHHHHHHcCCeeccCch
Confidence            24789999999999999999999999999887654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.25  E-value=1.3e-10  Score=80.04  Aligned_cols=119  Identities=28%  Similarity=0.324  Sum_probs=78.2

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCcc-c-c--CCCCceEE-
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS-Y-D--IGTGFGHF-   96 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~-~--~~~~~~~i-   96 (291)
                      +.+-|++|.|+|++++++||.++||++.-...+        .|+.+.=.+..++..+........ . .  ++--.-|+ 
T Consensus         3 ~~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd--------~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfG   74 (138)
T COG3565           3 PVPFHLAIPVNDLDETRRFYGEVLGCKEGRSTD--------TWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFG   74 (138)
T ss_pred             ccceEEeeeccccHHHHhhhhhhcccccccccc--------eEEEeeecccEEEEEecCCcccccCcccCCCCCCCccce
Confidence            456799999999999999999999998743322        222221123344444443332211 1 1  12123344 


Q ss_pred             -EEEeCCHHHHHHHHHHcCCeeecCCccCCCC---ceEEEEEECCCCCEEEEEEcC
Q 022835           97 -AIATEDVYKLVENIRAKGGNVTREPGPLKGG---TTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 -~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g---~~~~~~~~dp~G~~iel~~~~  148 (291)
                       .+.++|.-++.+||+++|+....+|..+..|   ....+++.||.||.+|+-.-.
T Consensus        75 vVl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR  130 (138)
T COG3565          75 VVLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFR  130 (138)
T ss_pred             EEEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeeccc
Confidence             4667899999999999999988887655432   223478999999999986543

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.21  E-value=8.4e-11  Score=93.12  Aligned_cols=99  Identities=19%  Similarity=0.321  Sum_probs=73.7

Q ss_pred             CCceeEeeeeC--CchhcHHHHHHhhCCeeeeeecCCC--cceeEEEecccccccceeEeeccccCc--cc-------cc
Q 022835          152 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPE--YKYTLAMLGYAEEDQTTVLELTYNYGV--TE-------YT  218 (291)
Q Consensus       152 ~~~~hv~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~-------~~  218 (291)
                      .+++|+++.|+  |++++.+||+++|||++.......+  .+.....+..+  .....++|..+.+.  .+       ..
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~--~g~i~l~L~~~~~~~~~s~~~~fl~~~   79 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASP--DGKIRIPLNEPASGKRKSQIQEFLEYY   79 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECC--CCcEEEEEecCCCCCCccHHHHHHHHh
Confidence            36899999999  9999999999999999887654332  22333344422  23566777654331  11       22


Q ss_pred             cCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCc
Q 022835          219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       219 ~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      .|+|++|++|.|+|++++++++    +++|++++..|.
T Consensus        80 ~G~Gv~HIAf~vdDI~~~~~~L----~~~Gv~~l~~P~  113 (191)
T cd07250          80 GGAGVQHIALATDDIFATVAAL----RARGVEFLPIPD  113 (191)
T ss_pred             CCCceeEEEEECCCHHHHHHHH----HHcCCeeccCch
Confidence            4679999999999999999999    999999998875

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.14  E-value=8.2e-10  Score=76.13  Aligned_cols=119  Identities=19%  Similarity=0.198  Sum_probs=76.4

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc--cc----cCcceeeE
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE--YT----KGNAYAQV  226 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~----~~~~~~h~  226 (291)
                      .+.|..+.|+|++++++||.++||++..+..+.      ++-+..  ..+...+-+....+...  ..    ......-+
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd~------wvdfDf--yGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGv   75 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRSTDT------WVDFDF--YGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGV   75 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhcccccccccce------EEEeee--cccEEEEEecCCcccccCcccCCCCCCCccceE
Confidence            467999999999999999999999997765331      111110  00111111111110000  00    11233457


Q ss_pred             EEEecchHHHHHHHHHHHHHhCCeeccCCccC---CCCCceEEEEECCCCceEEEecchh
Q 022835          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGPI---PGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       227 ~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~---~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      .|.++|.-+..+++    +++|+.+..+|.-+   .-+.++.+++.||+||.+|+-...+
T Consensus        76 Vl~~edW~alaerl----ea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR~  131 (138)
T COG3565          76 VLPVEDWFALAERL----EAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFRD  131 (138)
T ss_pred             EEEHHHHHHHHHHH----HHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecccc
Confidence            78888888888888    99999988887742   1124788999999999999965544

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.13  E-value=5.2e-10  Score=97.32  Aligned_cols=104  Identities=21%  Similarity=0.349  Sum_probs=74.0

Q ss_pred             CCCCcceeEEEEEEeC--CHHHHHHHHHhccCCEEEEEeccCC--CceEEEEEecCCCCcceEEEeeecC---CCc----
Q 022835           17 PKKDKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPE--EKYSNAFLGFGPEQSHFVVELTYNY---GVT----   85 (291)
Q Consensus        17 ~~~~~~~i~hv~i~v~--d~~~~~~FY~~~lG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~l~~~~~~---~~~----   85 (291)
                      +.+.+.+|+||++.|+  |+++++.||+++|||+.......+.  .......+...+  ....+++..+.   ...    
T Consensus       152 ~~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~--g~~~i~L~ep~~~~~~s~i~~  229 (353)
T TIGR01263       152 PGVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPD--GKVKIPLNEPASGKDKSQIEE  229 (353)
T ss_pred             CCCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCC--CcEEEEEeccCCCCCCCHHHH
Confidence            3456899999999999  9999999999999999887654322  222222333222  23445555431   111    


Q ss_pred             --cccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCc
Q 022835           86 --SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPG  122 (291)
Q Consensus        86 --~~~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~  122 (291)
                        ....|.|+.||||.|+|+++++++|+++|+++..+|.
T Consensus       230 fl~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P~  268 (353)
T TIGR01263       230 FLEFYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTPD  268 (353)
T ss_pred             HHHHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCCH
Confidence              1224789999999999999999999999999887653

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.12  E-value=7.1e-09  Score=76.12  Aligned_cols=117  Identities=21%  Similarity=0.225  Sum_probs=85.9

Q ss_pred             EEEeC-CHHHHHHHHHhccCCEEEEEeccCC----------CceEEEEEecCCCCcceEEEeeecCCCccccC-CCCceE
Q 022835           28 VYRVG-DLDRTIKFYTECFGMKLLRKRDVPE----------EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI-GTGFGH   95 (291)
Q Consensus        28 ~i~v~-d~~~~~~FY~~~lG~~~~~~~~~~~----------~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~   95 (291)
                      .|..+ |.++|++||+++||.+...+...++          +....+-+.+++  .  .+.+........... +.....
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g--~--~im~sd~~~~~~~~~~~~~s~~   80 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGG--S--TIMLSDAFPDMGATEGGGTSLS   80 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECC--E--EEEEecCCCccCcccCCCeeEE
Confidence            46778 9999999999999999998877666          455556666652  1  222222211111112 223456


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           96 FAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        96 i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      +.+.++|++++++++.+.|+++..+++..+||.+. ..++||.|+.|-|.....
T Consensus        81 l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~-G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          81 LDLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRY-GQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             EEEEehHHHHHHHHHHhcCCeEEecchhcCcccce-EEEECCCCCEEEEecCcc
Confidence            67778889999999999999999999999998875 789999999999877653

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.11  E-value=5.4e-09  Score=77.41  Aligned_cols=110  Identities=16%  Similarity=0.192  Sum_probs=73.7

Q ss_pred             EEEe-CCHHHHHHHHHhccCCEEEEEecc----------CCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEE
Q 022835           28 VYRV-GDLDRTIKFYTECFGMKLLRKRDV----------PEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        28 ~i~v-~d~~~~~~FY~~~lG~~~~~~~~~----------~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i   96 (291)
                      .|.+ .|.++|++||+++||+++......          ..+......+.+++  ..  +.+......... .+.+..++
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g--~~--l~~~d~~~~~~~-~~~~~~~l   78 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGG--QR--LMASDGGPGFPF-TFGNGISL   78 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECC--EE--EEEEcCCCCCCC-CCCCCEEE
Confidence            4666 899999999999999999876532          11233344455443  22  222222111111 12234578


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEE
Q 022835           97 AIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus        97 ~~~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel  144 (291)
                      ++.|+|   +++++++|.+.| ++..++...++|.+. ..++||+|+.|+|
T Consensus        79 ~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~-~~v~Dp~G~~W~i  127 (128)
T cd06588          79 SVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLF-GWVTDRFGVSWQI  127 (128)
T ss_pred             EEECCCHHHHHHHHHHHhcCC-eEeccchhcCccccc-EEEECCCCCEEEe
Confidence            888876   778889987666 888888888888765 8899999999987

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=99.07  E-value=3.7e-09  Score=82.75  Aligned_cols=147  Identities=24%  Similarity=0.322  Sum_probs=83.1

Q ss_pred             eEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecC---CC----ccc-----cCCC
Q 022835           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY---GV----TSY-----DIGT   91 (291)
Q Consensus        24 i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~---~~----~~~-----~~~~   91 (291)
                      |+||.+.|+|++++.++|++.|||++......+..+..-..+.++++    .||+....   ..    ..+     ..+.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~----YlEli~i~~~~~~~~~~~~~~~~~~~~~~   76 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDG----YLELIAIDPEAPAPDRGRWFGLDRLAGGE   76 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSS----EEEEEEES-HHHSTGGGT-TTTHHHHT--
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCc----eEEEEEeCCcccccccccceechhhcCCC
Confidence            68999999999999999977899999988887775666666666553    23333211   11    101     1467


Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCc--eEEEEEECC----CCCEEEEEEcCC-C---------CCCce
Q 022835           92 GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGT--THIAFVKDP----DGYIFELIQRGP-T---------PEPLC  155 (291)
Q Consensus        92 ~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~--~~~~~~~dp----~G~~iel~~~~~-~---------~~~~~  155 (291)
                      |+..+|+.++|+++..++|++.|+.... +....++.  ...+++.++    .+..-.+++-.+ .         ..++.
T Consensus        77 g~~~~~l~t~d~~~~~~~l~~~G~~~~~-r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~~~~~~~~~h~ng~~~i~  155 (175)
T PF13468_consen   77 GLYGWALRTDDIEAVAARLRAAGLDAGS-RVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWETPHPEWARHPNGALGIT  155 (175)
T ss_dssp             EEEEEEEE-S-HHHHHHHHHTTT-EEEE-EEEEEE-EEEEEEEEEE-SS---SS---EEEEESS-CCHHTTT--TTEEEE
T ss_pred             CeEEEEEecCCHHHHHHHHHhcCCCCCC-cCcCCCCcceEEEEEeCCcccccCCCCcEEEEeCCCCcccccCCCccceEE
Confidence            8999999999999999999999986211 11111121  223445553    245555663322 1         23589


Q ss_pred             eEeeeeCCchhcHHHHHHhh
Q 022835          156 QVMLRVGDLGRSIKFYEKAL  175 (291)
Q Consensus       156 hv~l~v~d~~~~~~fy~~~l  175 (291)
                      ++.+.++|++++.++|.++|
T Consensus       156 ~v~i~~~d~~~~~~~~~~l~  175 (175)
T PF13468_consen  156 RVVIAVPDPDAAAARYARLL  175 (175)
T ss_dssp             EEEEEETTHHHHHHHHHHH-
T ss_pred             EEEEEeCCHHHHHHHHHhhC
Confidence            99999999999999998865

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.03  E-value=3.7e-09  Score=74.32  Aligned_cols=115  Identities=23%  Similarity=0.242  Sum_probs=73.5

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccc------cCccccccCcceeeE
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYN------YGVTEYTKGNAYAQV  226 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~------~~~~~~~~~~~~~h~  226 (291)
                      +..+|+|.|.|++++.+||.. |||+..+...+..  .......  +  +-..+-|...      ...........-..+
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~--a~~mi~~--~--ni~vMLL~~~~fq~F~~~~i~dt~~s~evli   75 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED--AACMIIS--D--NIFVMLLEEARFQTFTKRQIADTTKSREVLI   75 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCccccc--ceeEEEe--c--cEEEEEeccHHhhhhcccccccccCCceEEE
Confidence            467899999999999999977 9999876543222  1222222  1  1122222110      011112233466789


Q ss_pred             EEEecc---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          227 AISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       227 ~f~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      +|.+.+   +++.+++.    .++|+....+|......  +-.-|.|||||.||++=
T Consensus        76 ~ls~~s~eevd~~v~ka----~eaGGk~~~~~~d~gfM--Yg~~fqDpDGh~wE~l~  126 (133)
T COG3607          76 SLSAGSREEVDELVDKA----LEAGGKPANEPQDEGFM--YGRSFQDPDGHVWEFLW  126 (133)
T ss_pred             EeccCcHHHHHHHHHHH----HHcCCCCCCCccccccc--cceeeeCCCCCeEEEEE
Confidence            999986   55555555    99999998777765542  33568999999999964

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.03  E-value=7.7e-09  Score=76.60  Aligned_cols=114  Identities=14%  Similarity=0.032  Sum_probs=69.9

Q ss_pred             eeee-CCchhcHHHHHHhhCCeeeeeecCC----------CcceeEEEecccccccceeEeeccccCccccccCcceeeE
Q 022835          158 MLRV-GDLGRSIKFYEKALGMKLLRTVDKP----------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV  226 (291)
Q Consensus       158 ~l~v-~d~~~~~~fy~~~lG~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~  226 (291)
                      -|.+ .|.+++.+||+++||+++.......          ++...-..+..+    +..+-+......... .+....++
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~l~~~d~~~~~~~-~~~~~~~l   78 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIG----GQRLMASDGGPGFPF-TFGNGISL   78 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEEC----CEEEEEEcCCCCCCC-CCCCCEEE
Confidence            3556 8999999999999999988765321          111122222221    222322221111111 12345689


Q ss_pred             EEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEe
Q 022835          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       227 ~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~  279 (291)
                      ++.|+|.++ ++++++++.+.| +++.+|...++ +.+.++++||+|+.|+|.
T Consensus        79 ~i~~~~~e~-v~~~~~~l~~~g-~~~~~~~~~~~-g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          79 SVECDSEEE-ADRLFEALSEGG-TVLMPLQKTFW-SPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEECCCHHH-HHHHHHHHhcCC-eEeccchhcCc-ccccEEEECCCCCEEEeC
Confidence            999998333 344444446554 88888887776 468899999999999984

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.96  E-value=3.9e-09  Score=78.01  Aligned_cols=122  Identities=23%  Similarity=0.386  Sum_probs=73.9

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCce---EEEEEecCCCCcceEEEe--------eecCCCc-cccC
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY---SNAFLGFGPEQSHFVVEL--------TYNYGVT-SYDI   89 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~l~~--------~~~~~~~-~~~~   89 (291)
                      +++.||.|.|+|++++.+||+++||++............   ...+..............        ....... ....
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            478999999999999999999999999987655333211   111111110000110000        0000000 0011


Q ss_pred             C-CCceEEEEEeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835           90 G-TGFGHFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        90 ~-~~~~~i~~~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      + .+..|+++.+.+   .......+...|..+..... ..++.  .+|++||||+++|+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~--~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRGGV--HVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCcce--EEEEECCCCcEEEeeC
Confidence            1 346789999988   66777777788888655433 33333  4899999999999864

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.95  E-value=9.2e-09  Score=72.35  Aligned_cols=117  Identities=19%  Similarity=0.286  Sum_probs=74.3

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccc-------cCCCCce
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY-------DIGTGFG   94 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~-------~~~~~~~   94 (291)
                      .+...|.|.|.|++++.+||+. |||+.-.....+.   ...++ +++ .  +.+.|.....-+.+       .....-.
T Consensus         2 ~~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~---a~~mi-~~~-n--i~vMLL~~~~fq~F~~~~i~dt~~s~ev   73 (133)
T COG3607           2 TQMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED---AACMI-ISD-N--IFVMLLEEARFQTFTKRQIADTTKSREV   73 (133)
T ss_pred             ceEEEEecchhhHHHHHHHHHH-hCcccCCCccccc---ceeEE-Eec-c--EEEEEeccHHhhhhcccccccccCCceE
Confidence            4567899999999999999999 9999854422211   12222 221 1  22222221111111       1223445


Q ss_pred             EEEEEeC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           95 HFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        95 ~i~~~v~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      -+|+.+.   +++++.+++.++|.+...++..... .+ ...|.|||||.||+..-.
T Consensus        74 li~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~gf-MY-g~~fqDpDGh~wE~l~m~  128 (133)
T COG3607          74 LISLSAGSREEVDELVDKALEAGGKPANEPQDEGF-MY-GRSFQDPDGHVWEFLWMD  128 (133)
T ss_pred             EEEeccCcHHHHHHHHHHHHHcCCCCCCCcccccc-cc-ceeeeCCCCCeEEEEEeC
Confidence            6778774   5889999999999998766554432 22 367899999999998654

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.95  E-value=6.2e-09  Score=76.84  Aligned_cols=123  Identities=15%  Similarity=0.227  Sum_probs=83.2

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccc--cCCCCceEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY--DIGTGFGHF   96 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~i   96 (291)
                      +.+.++.||++.|++.+++..+++. |||+.+.+....    .+..++  ++...+++...+......+  .+|++++.+
T Consensus         5 ~g~~G~dFvEFa~~~~~~l~~~~~~-lGF~~~a~hrsk----~v~l~r--QG~I~~vln~ep~s~a~~~~~~HG~sv~ai   77 (139)
T PF14696_consen    5 LGLDGFDFVEFAVPDAQALAQLFTA-LGFQPVARHRSK----DVTLYR--QGDINFVLNSEPDSFAAEFAAQHGPSVCAI   77 (139)
T ss_dssp             T-EEEEEEEEEE-SSTTSCHHHHCC-CCEEEECCECCC----SEEEEE--ETTEEEEEEEESTSCHHHHHHHHSSEEEEE
T ss_pred             CCCCCeEEEEEecCCHHHHHHHHHH-hCcceEEecCCc----ceEEEE--eCCEEEEEeCCCcchHHHHHHhcCCEEEEE
Confidence            6799999999999998888888865 999998764321    123333  4567777765443333333  378999999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC
Q 022835           97 AIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        97 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      +|+|+|.+++++++.+.|++....+.. + +.....-++.++|.++.|++....
T Consensus        78 afrV~Da~~A~~rA~~~GA~~~~~~~~-~-~e~~~paI~g~G~sl~yfVdr~~~  129 (139)
T PF14696_consen   78 AFRVDDAAAAYERAVALGAEPVQEPTG-P-GELNIPAIRGIGGSLHYFVDRYGD  129 (139)
T ss_dssp             EEEES-HHHHHHHHHHTT--EEEEEEE-T-T-BEEEEEE-CCC-EEEEEE--SS
T ss_pred             EEEeCCHHHHHHHHHHcCCcCcccCCC-C-CcEeeeeEEccCCCEEEEEecCCC
Confidence            999999999999999999997765422 2 233346789999999999988643

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.91  E-value=6.3e-09  Score=76.87  Aligned_cols=121  Identities=24%  Similarity=0.287  Sum_probs=72.2

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcc---eeEEEecccccccc--eeE------eeccccCcc-ccccC
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK---YTLAMLGYAEEDQT--TVL------ELTYNYGVT-EYTKG  220 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~l------~l~~~~~~~-~~~~~  220 (291)
                      ++.|+.+.|+|++++.+||+++||+++..+.......   ..............  ...      ......... ....+
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPGG   81 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecCc
Confidence            5789999999999999999999999998765432221   11122221100000  000      000000000 01111


Q ss_pred             -cceeeEEEEecc---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          221 -NAYAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       221 -~~~~h~~f~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                       .+..|++|.+.+   ........    ...|..+...+. ..+  +..+|++||||++||+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~~~~~~~~-~~~--~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          82 DLGLGHLAFEVDDEAFGDAALAFL----DPDGVRIELGEP-GRG--GVHVYFRDPDGILIELAT  138 (138)
T ss_pred             hhccCceeEecccccccceEEEee----CCCCCEEEeecC-CCc--ceEEEEECCCCcEEEeeC
Confidence             246899999998   45555555    777887665444 222  238999999999999974

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.91  E-value=5.2e-09  Score=90.74  Aligned_cols=101  Identities=21%  Similarity=0.335  Sum_probs=73.5

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCC-----CceEEEEEecCCCCcceEEEeeecCC----C---cc
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----EKYSNAFLGFGPEQSHFVVELTYNYG----V---TS   86 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~l~~~~~~~----~---~~   86 (291)
                      ..+.+|+||++.|++++++..||+++|||+.......+.     .+.....+..+++  ...+++..+..    .   ..
T Consensus       176 ~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g--~v~ipLnEP~~~~~~~SqI~e  253 (398)
T PLN02875        176 YGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNE--MVLLPLNEPTFGTKRKSQIQT  253 (398)
T ss_pred             CCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCC--cEEEEeccCCCCCCCcChHHH
Confidence            347899999999999999999999999998876544322     1234555543332  34455544321    1   12


Q ss_pred             c---cCCCCceEEEEEeCCHHHHHHHHHHc----CCeeecCC
Q 022835           87 Y---DIGTGFGHFAIATEDVYKLVENIRAK----GGNVTREP  121 (291)
Q Consensus        87 ~---~~~~~~~~i~~~v~di~~~~~~l~~~----G~~~~~~~  121 (291)
                      +   ..|.|++||||.|+||.++.++|+++    |++++..|
T Consensus       254 FL~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        254 YLEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             HHHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence            2   35789999999999999999999999    99987644

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.90  E-value=5.7e-08  Score=71.38  Aligned_cols=115  Identities=17%  Similarity=0.163  Sum_probs=76.7

Q ss_pred             eeeC-CchhcHHHHHHhhCCeeeeeecCCC----------cceeEEEecccccccceeEeeccccCccccccCc-ceeeE
Q 022835          159 LRVG-DLGRSIKFYEKALGMKLLRTVDKPE----------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGN-AYAQV  226 (291)
Q Consensus       159 l~v~-d~~~~~~fy~~~lG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~-~~~h~  226 (291)
                      |... |.+++.+||+++||.+...+...++          +...=+.+..+    +..|-+....+......++ .-.-+
T Consensus         6 l~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~----g~~im~sd~~~~~~~~~~~~~s~~l   81 (136)
T COG2764           6 LFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG----GSTIMLSDAFPDMGATEGGGTSLSL   81 (136)
T ss_pred             EEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC----CEEEEEecCCCccCcccCCCeeEEE
Confidence            5566 9999999999999999888766554          22111122211    1222222221111112222 33467


Q ss_pred             EEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       227 ~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      .+.++|++...+++    .+.|+++..++....+ +.++..++||.|+.|-|....
T Consensus        82 ~~~~~d~da~f~~a----~~aGa~v~mpl~~~fw-G~r~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          82 DLYVEDVDAVFERA----AAAGATVVMPLEDTFW-GDRYGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             EEEehHHHHHHHHH----HhcCCeEEecchhcCc-ccceEEEECCCCCEEEEecCc
Confidence            77777877777777    9999999999888877 578999999999999997764

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.76  E-value=6.7e-07  Score=62.79  Aligned_cols=114  Identities=24%  Similarity=0.319  Sum_probs=65.3

Q ss_pred             EEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCCHH
Q 022835           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVY  104 (291)
Q Consensus        25 ~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~di~  104 (291)
                      .+-.|.|+|-+...+||+++|||++..+..      .+++++..+....++|+-++............+..+.+.|++..
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~   75 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPK   75 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHH
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHH
Confidence            466899999999999999999999988755      35677654444456666555544444445567899999999987


Q ss_pred             HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          105 KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       105 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +. +.|.++|.++... .....| +. +-..+|+|.++.+....
T Consensus        76 EI-e~LLar~~~~~~l-~kg~~g-yA-fe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   76 EI-EALLARGAQYDRL-YKGKNG-YA-FEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             HH-HHHHHC-S--SEE-EE-SSS-EE-EEEE-TT--EEEEE--S
T ss_pred             HH-HHHHhccccccee-EEcCCc-eE-EEEECCCCCEEEEEEcC
Confidence            74 4555666553221 122222 22 45679999999877554

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.66  E-value=2.2e-07  Score=78.02  Aligned_cols=107  Identities=23%  Similarity=0.240  Sum_probs=69.4

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .+..||+|.|.|++++++||+++|++..  .   .++. ... ++  +  ....+-+... +    ........+++.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~--F---sde~-a~c-m~--d--tI~vMllt~~-D----~~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC--W---DGDK-LFL-LG--K--TSLYLQQTKA-E----KKNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC--C---CCCc-ccc-cc--C--cEEEEEecCC-C----CCCcceEEEEeccC
Confidence            5688999999999999999999988874  1   1111 111 11  1  1222222221 1    11235578999999


Q ss_pred             chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEe
Q 022835          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~  279 (291)
                      + .+.+.++-.+..++|+....+|..+..    .--|.|||||.||++
T Consensus       310 S-re~VD~lv~~A~aaGG~~~~~~~D~Gf----~rsf~D~DGH~WEi~  352 (357)
T PRK01037        310 C-EHDFVRFLRRWEMLGGELGEQADGHFP----LRLVFDLDGHIWVVS  352 (357)
T ss_pred             C-HHHHHHHHHHHHHcCCCCCCCcccccC----cceeECCCCCEEEEE
Confidence            7 444444444449999977666666544    346899999999997

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.61  E-value=4.4e-07  Score=76.26  Aligned_cols=107  Identities=22%  Similarity=0.337  Sum_probs=71.4

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEe
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v  100 (291)
                      -.+.-||+|.|.|++++.+||+.+|++.. ..    ++..  +.+  +  ...+.+-+.+. ..    ....-.-+|+.+
T Consensus       245 ~~~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fs----de~a--~cm--~--dtI~vMllt~~-D~----~~~~evLl~Ls~  308 (357)
T PRK01037        245 SPKTFSVVLEVQDLRRAKKFYSKMFGLEC-WD----GDKL--FLL--G--KTSLYLQQTKA-EK----KNRGTTTLSLEL  308 (357)
T ss_pred             CCceEEEEeeeCCHHHHHHHHHHHhCCCC-CC----CCcc--ccc--c--CcEEEEEecCC-CC----CCcceEEEEecc
Confidence            35677999999999999999999877763 22    2211  222  2  22222222222 11    122345678888


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835          101 E---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       101 ~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      +   +++++.+++.++|.+...+++....+    .-|.|||||.||++..
T Consensus       309 ~Sre~VD~lv~~A~aaGG~~~~~~~D~Gf~----rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        309 ECEHDFVRFLRRWEMLGGELGEQADGHFPL----RLVFDLDGHIWVVSCV  354 (357)
T ss_pred             CCHHHHHHHHHHHHHcCCCCCCCcccccCc----ceeECCCCCEEEEEEE
Confidence            5   58899999999999766666655552    4589999999999864

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.52  E-value=3e-06  Score=59.58  Aligned_cols=115  Identities=27%  Similarity=0.381  Sum_probs=65.2

Q ss_pred             eeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc-cccC-cceeeEEEEecc
Q 022835          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKG-NAYAQVAISTDD  232 (291)
Q Consensus       155 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~-~~~~h~~f~v~d  232 (291)
                      .+..+.|.|-+...+||+++|||++.....      .+++++...  ....+.+-..+.... ...| --+.++.+.|++
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~--~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~   73 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQ--KEERLVLEESPSMRTRAVEGPKKLNRIVIKVPN   73 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT----EEEEEEE--TTT-B--SSS-SEEEEEEEESS
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCC--CceEEEEecCCccccccccCcceeeEEEEEcCC
Confidence            456799999999999999999999876532      344455222  234444443332221 1223 368899999999


Q ss_pred             hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhH
Q 022835          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~  285 (291)
                       .+.++.|    .++|.++..-   ..+..++.+-..+|+|.+|.|....+..
T Consensus        74 -~~EIe~L----Lar~~~~~~l---~kg~~gyAfe~vSPEgd~~llhaEdd~~  118 (125)
T PF14506_consen   74 -PKEIEAL----LARGAQYDRL---YKGKNGYAFEAVSPEGDRFLLHAEDDIS  118 (125)
T ss_dssp             -HHHHHHH----HHC-S--SEE---EE-SSSEEEEEE-TT--EEEEE--S-GG
T ss_pred             -HHHHHHH----Hhccccccee---EEcCCceEEEEECCCCCEEEEEEcCCHh
Confidence             7777777    7777663321   1122356666789999999999887764

>PRK10148 hypothetical protein; Provisional

Probab=98.51  E-value=1.9e-05  Score=59.71  Aligned_cols=117  Identities=16%  Similarity=0.152  Sum_probs=76.5

Q ss_pred             EEEEeC-CHHHHHHHHHhccCCEEEEEec---c-----------------CCCceEEEEEecCCCCcceEEEeeecCCCc
Q 022835           27 AVYRVG-DLDRTIKFYTECFGMKLLRKRD---V-----------------PEEKYSNAFLGFGPEQSHFVVELTYNYGVT   85 (291)
Q Consensus        27 v~i~v~-d~~~~~~FY~~~lG~~~~~~~~---~-----------------~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~   85 (291)
                      .-|..+ |.++|.+||+++||.++.....   .                 +++....+-+.+++  .  .+.+.......
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g--~--~lm~sD~~~~~   80 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAG--S--DIMMSDAIPSG   80 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECC--E--EEEEECCCCCc
Confidence            345554 8999999999999998865431   1                 12344455566643  1  22222211001


Q ss_pred             cccCCCCceEEEEEeCCHHH---HHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCCC
Q 022835           86 SYDIGTGFGHFAIATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus        86 ~~~~~~~~~~i~~~v~di~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~  151 (291)
                       ...+ ...++++.++|.++   ++++| +.|.++..++...+||.+. ..++||.|+.|.|...+..|
T Consensus        81 -~~~~-~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~~-g~v~D~fGi~W~l~~~~~~~  145 (147)
T PRK10148         81 -KAHY-SGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHGF-GKVTDKFGVPWMINVVKQQP  145 (147)
T ss_pred             -CCCC-CeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhcc-EEEECCCCCEEEEEecCCCC
Confidence             1112 24577888888776   55555 6999999999999998765 78999999999998765433

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.41  E-value=1.1e-06  Score=73.25  Aligned_cols=102  Identities=21%  Similarity=0.308  Sum_probs=73.8

Q ss_pred             CCcceeEEEEEEeC--CHHHHHHHHHhccCCEEEEEeccCCC--ceEEEEEecCCCCcceEEEeeecC--CC--ccc---
Q 022835           19 KDKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNY--GV--TSY---   87 (291)
Q Consensus        19 ~~~~~i~hv~i~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~l~~~~~~--~~--~~~---   87 (291)
                      ..+..|+|++..|.  +++.+..||+++|+|+.....+.++.  +.....+....+.  +-|.+....  ..  ..+   
T Consensus       163 ~g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~--vrlplN~s~~~~sqi~efl~~  240 (363)
T COG3185         163 VGLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGK--VRLPLNESADDKSQIGEFLRE  240 (363)
T ss_pred             cCceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCc--EEeecccCCCchhHHHHHHHH
Confidence            44689999998876  99999999999999999887666543  3333333322222  444443322  22  112   


Q ss_pred             cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCc
Q 022835           88 DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPG  122 (291)
Q Consensus        88 ~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~  122 (291)
                      ..|.|+.||||.++||-++.++|+++|+.+...|.
T Consensus       241 y~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~  275 (363)
T COG3185         241 YRGEGIQHIAFGTDDIYATVAALRERGVKFLPIPE  275 (363)
T ss_pred             hCCCcceEEEecccHHHHHHHHHHHcCCccCCCch
Confidence            37889999999999999999999999999887654

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.22  E-value=2.9e-06  Score=69.50  Aligned_cols=123  Identities=15%  Similarity=0.163  Sum_probs=77.7

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcc--eeEEEecccccccceeEeeccc--cCccc-----cccCcc
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK--YTLAMLGYAEEDQTTVLELTYN--YGVTE-----YTKGNA  222 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~--~~~~~-----~~~~~~  222 (291)
                      .+++||.+.|.|...+.+||+..|||++.......-+.  +.-..++.+    ...+.+...  .+...     ...|.+
T Consensus        16 l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g----~~vFv~~s~~~p~~~~~G~~l~~Hgdg   91 (381)
T KOG0638|consen   16 LRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQG----KIVFVFNSAYNPDNSEYGDHLVKHGDG   91 (381)
T ss_pred             eeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcC----CEEEEEecCCCCCchhhhhhhhhcccc
Confidence            46999999999999999999999999987643211110  111111110    111111111  11111     125667


Q ss_pred             eeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCC--CCCceEEEEECCCCceEEEecch
Q 022835          223 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIP--GLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       223 ~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~--~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      +--+||.|+|++++.+.+    .++|+.+..+|-...  .+..+++.+..+.-.-.-+++++
T Consensus        92 vkdvafeVeD~da~~~~~----va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~  149 (381)
T KOG0638|consen   92 VKDVAFEVEDADAIFQEA----VANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERK  149 (381)
T ss_pred             hhceEEEecchHHHHHHH----HHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhc
Confidence            889999999999999999    999999999887632  22357777776654444444433

>PRK10148 hypothetical protein; Provisional

Probab=98.21  E-value=4.8e-05  Score=57.48  Aligned_cols=114  Identities=16%  Similarity=0.084  Sum_probs=69.4

Q ss_pred             eee-CCchhcHHHHHHhhCCeeeeeecCC--------------------CcceeEEEecccccccceeEeeccccCcccc
Q 022835          159 LRV-GDLGRSIKFYEKALGMKLLRTVDKP--------------------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEY  217 (291)
Q Consensus       159 l~v-~d~~~~~~fy~~~lG~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~  217 (291)
                      |.. .|-+++.+||+++||.++.......                    ++..--+.+..+    +..+-+.....  ..
T Consensus         7 L~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~----g~~lm~sD~~~--~~   80 (147)
T PRK10148          7 LSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIA----GSDIMMSDAIP--SG   80 (147)
T ss_pred             EEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEEC----CEEEEEECCCC--Cc
Confidence            444 4899999999999998876543110                    111111222221    12222211111  01


Q ss_pred             ccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       218 ~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      .......++++.++|.++ ++++...| +.|+++..++....+ +.++..++||.|+.|.|...
T Consensus        81 ~~~~~~~~l~l~~~d~ee-~~~~~~aL-a~gg~v~mpl~~~~w-g~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         81 KAHYSGFTLVLDTQDVEE-GKRWFDNL-AANGKIEMAWQETFW-AHGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             CCCCCeEEEEEECCCHHH-HHHHHHHh-hCCCEEEecchhcch-hhccEEEECCCCCEEEEEec
Confidence            111124678888889554 34554454 689999999888877 46889999999999999765

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=97.90  E-value=0.00023  Score=52.76  Aligned_cols=117  Identities=19%  Similarity=0.188  Sum_probs=76.1

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc----cccCcceeeEE
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE----YTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~h~~  227 (291)
                      ..+++|.+.+++.+++..+++ .|||+..-+....+  ..++.-+      ...+.++...+...    ...|+++--++
T Consensus         8 ~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk~--v~l~rQG------~I~~vln~ep~s~a~~~~~~HG~sv~aia   78 (139)
T PF14696_consen    8 DGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSKD--VTLYRQG------DINFVLNSEPDSFAAEFAAQHGPSVCAIA   78 (139)
T ss_dssp             EEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCCS--EEEEEET------TEEEEEEEESTSCHHHHHHHHSSEEEEEE
T ss_pred             CCeEEEEEecCCHHHHHHHHH-HhCcceEEecCCcc--eEEEEeC------CEEEEEeCCCcchHHHHHHhcCCEEEEEE
Confidence            357899999999888888885 59999887653322  2333212      34444443222111    23678999999


Q ss_pred             EEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       228 f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      |.|+|..++.++.    .++|++.+..|....  ......++-++|.++-|+++.+
T Consensus        79 frV~Da~~A~~rA----~~~GA~~~~~~~~~~--e~~~paI~g~G~sl~yfVdr~~  128 (139)
T PF14696_consen   79 FRVDDAAAAYERA----VALGAEPVQEPTGPG--ELNIPAIRGIGGSLHYFVDRYG  128 (139)
T ss_dssp             EEES-HHHHHHHH----HHTT--EEEEEEETT---BEEEEEE-CCC-EEEEEE--S
T ss_pred             EEeCCHHHHHHHH----HHcCCcCcccCCCCC--cEeeeeEEccCCCEEEEEecCC
Confidence            9999999999999    999999887764322  2567788999999999998754

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=97.76  E-value=0.00012  Score=57.28  Aligned_cols=87  Identities=23%  Similarity=0.317  Sum_probs=50.4

Q ss_pred             ceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcc--eeEEEecccccccceeEeeccccCccc------------ccc
Q 022835          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK--YTLAMLGYAEEDQTTVLELTYNYGVTE------------YTK  219 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~~~~~------------~~~  219 (291)
                      ++|+.+.|+|++++.++|++.|||++.........+  -.++.++  +   + .||+....+...            ...
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~--~---~-YlEli~i~~~~~~~~~~~~~~~~~~~~   74 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFG--D---G-YLELIAIDPEAPAPDRGRWFGLDRLAG   74 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-S--S---S-EEEEEEES-HHHSTGGGT-TTTHHHHT
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeC--C---c-eEEEEEeCCcccccccccceechhhcC
Confidence            689999999999999999888999998776544423  2444444  2   3 777765321111            013


Q ss_pred             CcceeeEEEEecchHHHHHHHHHHHHHhCCe
Q 022835          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGK  250 (291)
Q Consensus       220 ~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~  250 (291)
                      +.|..+++|.++|+++..+++    ++.|++
T Consensus        75 ~~g~~~~~l~t~d~~~~~~~l----~~~G~~  101 (175)
T PF13468_consen   75 GEGLYGWALRTDDIEAVAARL----RAAGLD  101 (175)
T ss_dssp             --EEEEEEEE-S-HHHHHHHH----HTTT-E
T ss_pred             CCCeEEEEEecCCHHHHHHHH----HhcCCC
Confidence            568899999999999999999    899975

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=96.21  E-value=0.013  Score=40.55  Aligned_cols=92  Identities=17%  Similarity=0.209  Sum_probs=41.2

Q ss_pred             ceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec--
Q 022835          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--  231 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~--  231 (291)
                      +..+.|+|+| +++..||+++||-...         ..+.+...    .+..+.+..       ..-=++..+-|.|+  
T Consensus         6 ~e~i~LNV~d-~~~~~fy~~~f~~~~~---------~~l~f~ea----~G~DL~~~~-------~~twDLe~Lkf~V~~~   64 (101)
T PF14507_consen    6 FESIELNVPD-AKSQSFYQSIFGGQLP---------FFLTFQEA----QGPDLTIEN-------NETWDLEMLKFQVPKD   64 (101)
T ss_dssp             E-EEEEEE-T--T---S--H---HHHT---------TTEEEEE-------CCGSS-T-------TSBSSEEEEEEEES-S
T ss_pred             EEEEEEeCCC-hhHHHHHHhccccCCC---------ceEEEeec----cCCccccCC-------CcEEeeEEEEEEecCc
Confidence            4568899999 8899999998873321         12222221    122221110       00116678899998  


Q ss_pred             -chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEE
Q 022835          232 -DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       232 -d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~  278 (291)
                       |+.+..+++    ++  ..+.-++      ..+++.++||+|..|++
T Consensus        65 ~Dl~~L~~~l----e~--~~~fidK------k~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   65 FDLAALKSHL----EE--QEFFIDK------KEKFLVTSDPSQIELWF  100 (101)
T ss_dssp             --HHHHHHHT----TT--S-EE--T------T-SEEEEE-TTS-EEEE
T ss_pred             ccHHHHHHHh----cc--cceEecC------CceEEEEECCcceEEEe
Confidence             455555555    55  3333222      24789999999999886

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.14  E-value=0.17  Score=36.49  Aligned_cols=104  Identities=19%  Similarity=0.187  Sum_probs=54.8

Q ss_pred             eEeeeeCCchhcHHHHHHhhCCeeeeee-cCCC------cceeEEEecccccccceeEeeccccCccccccCcceeeEEE
Q 022835          156 QVMLRVGDLGRSIKFYEKALGMKLLRTV-DKPE------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       156 hv~l~v~d~~~~~~fy~~~lG~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f  228 (291)
                      ++.+. .+-++|.+||.++||-...... ..++      +..--+.+...    +..+-.....  .....+ ....+++
T Consensus         6 yL~F~-g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~----g~~lm~~D~~--~~~~~~-~~~sl~i   77 (116)
T PF06983_consen    6 YLWFN-GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIG----GQKLMASDGG--PDFPFG-NNISLCI   77 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEET----TEEEEEEEES--TS-----TTEEEEE
T ss_pred             EEEeC-CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEEC----CeEEEEECCC--CCCCCC-CcEEEEE
Confidence            34444 7899999999999995333221 1111      11111112211    1222111111  112222 3377888


Q ss_pred             EecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEe
Q 022835          229 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       229 ~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~  279 (291)
                      .++| .+.++++..+|.+.|-         +.  ..+..+.|.-|..|.|+
T Consensus        78 ~~~~-~ee~~~~f~~Ls~gG~---------~~--~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   78 ECDD-EEEIDRIFDKLSEGGQ---------WF--SRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             EESS-HHHHHHHHHHHHTTTE---------TC--CEEEEEE-TTS-EEEEE
T ss_pred             EcCC-HHHHHHHHHHHHcCCC---------cc--ceeEEEEeCCCCEEEeC
Confidence            8898 6677777777665553         22  37889999999999985

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.08  E-value=0.33  Score=34.94  Aligned_cols=96  Identities=20%  Similarity=0.386  Sum_probs=51.9

Q ss_pred             CCHHHHHHHHHhccCCEEEE-EeccCC------CceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCC--
Q 022835           32 GDLDRTIKFYTECFGMKLLR-KRDVPE------EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED--  102 (291)
Q Consensus        32 ~d~~~~~~FY~~~lG~~~~~-~~~~~~------~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d--  102 (291)
                      .+.++|.+||+++||-..+. ....++      +....+.+.+++  ..  +......  ..+..+++ ..+++.++|  
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g--~~--lm~~D~~--~~~~~~~~-~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGG--QK--LMASDGG--PDFPFGNN-ISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETT--EE--EEEEEES--TS----TT-EEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECC--eE--EEEECCC--CCCCCCCc-EEEEEEcCCHH
Confidence            68999999999999953332 222222      233344454432  11  2222222  22223333 577888877  


Q ss_pred             -HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEE
Q 022835          103 -VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       103 -i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                       ++.++++|.+.|-         +++  .+..+.|.-|..|.|+
T Consensus        84 e~~~~f~~Ls~gG~---------~~~--~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ---------WFS--RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE---------TCC--EEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC---------ccc--eeEEEEeCCCCEEEeC
Confidence             4566777777663         333  3477999999999875

>PF15067 FAM124: FAM124 family

Probab=95.69  E-value=0.14  Score=40.98  Aligned_cols=105  Identities=16%  Similarity=0.170  Sum_probs=60.7

Q ss_pred             eeEEEEEEeC--CHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeec-CCCccccCCCCceEEEEE
Q 022835           23 RFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN-YGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        23 ~i~hv~i~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~i~~~   99 (291)
                      -+--+.|+|+  |.+.+++||+-+|+-+.....    .++..+-+ +.+.+..+-+.+..- .+..+.  .....-+.|.
T Consensus       128 EilRftly~~~~N~~d~vr~Yelil~~~~~~~k----~~FC~F~l-ys~~~~~iQlsLK~lp~~~~p~--p~esavLqF~  200 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMVRFYELILQREPTQQK----EDFCFFTL-YSQPGLDIQLSLKQLPPGMSPE--PTESAVLQFR  200 (236)
T ss_pred             cEEEEEEEecCCCHHHHHHHHHHHhccCcceee----CCcEEEEE-ecCCCeEEEEEeccCCCCCCcc--cccceEEEEE
Confidence            4667889999  999999999999998875432    22222222 233333333333221 122111  1233467899


Q ss_pred             eCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEE
Q 022835          100 TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus       100 v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel  144 (291)
                      |.|+.++...|-. .+.        +-+..+ +-..|||||.|-|
T Consensus       201 V~~igqLvpLLPn-pc~--------PIS~~r-WqT~D~DGNkILL  235 (236)
T PF15067_consen  201 VEDIGQLVPLLPN-PCS--------PISETR-WQTEDYDGNKILL  235 (236)
T ss_pred             ecchhhhcccCCC-Ccc--------cccCCc-ceeeCCCCCEecc
Confidence            9999887655432 221        112222 5679999999853

>PF15067 FAM124: FAM124 family

Probab=95.03  E-value=0.59  Score=37.52  Aligned_cols=107  Identities=13%  Similarity=0.105  Sum_probs=64.4

Q ss_pred             CCCceeEeeeeC--CchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc-cccCcceeeEE
Q 022835          151 PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVA  227 (291)
Q Consensus       151 ~~~~~hv~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~  227 (291)
                      ...+.-+++.|.  |.+.+.+||+-+|+-++...-  .+  +-++.+-. .  .+..+++....-+.. .+.+....-+-
T Consensus       126 G~EilRftly~~~~N~~d~vr~Yelil~~~~~~~k--~~--FC~F~lys-~--~~~~iQlsLK~lp~~~~p~p~esavLq  198 (236)
T PF15067_consen  126 GKEILRFTLYCSFDNYEDMVRFYELILQREPTQQK--ED--FCFFTLYS-Q--PGLDIQLSLKQLPPGMSPEPTESAVLQ  198 (236)
T ss_pred             cccEEEEEEEecCCCHHHHHHHHHHHhccCcceee--CC--cEEEEEec-C--CCeEEEEEeccCCCCCCcccccceEEE
Confidence            345778899999  999999999999998875432  22  22222211 1  144555544322111 12333557899


Q ss_pred             EEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEE
Q 022835          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       228 f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~  278 (291)
                      |.|.|+-+.+..|     -+.+..+   +      ..-+-..|||||.|-+
T Consensus       199 F~V~~igqLvpLL-----Pnpc~PI---S------~~rWqT~D~DGNkILL  235 (236)
T PF15067_consen  199 FRVEDIGQLVPLL-----PNPCSPI---S------ETRWQTEDYDGNKILL  235 (236)
T ss_pred             EEecchhhhcccC-----CCCcccc---c------CCcceeeCCCCCEecc
Confidence            9999987777766     2222111   1      1225679999999853

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=93.33  E-value=0.41  Score=33.21  Aligned_cols=92  Identities=16%  Similarity=0.229  Sum_probs=37.9

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCcccc-CCCCceEEEEEeC
Q 022835           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYD-IGTGFGHFAIATE  101 (291)
Q Consensus        23 ~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~i~~~v~  101 (291)
                      .+..+.|.|+| +++.+||+++||-..      +   ..+.+.. +++           +...-.. ..=++..+-|.|+
T Consensus         5 ~~e~i~LNV~d-~~~~~fy~~~f~~~~------~---~~l~f~e-a~G-----------~DL~~~~~~twDLe~Lkf~V~   62 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQSFYQSIFGGQL------P---FFLTFQE-AQG-----------PDLTIENNETWDLEMLKFQVP   62 (101)
T ss_dssp             EE-EEEEEE-T--T---S--H---HHH------T---TTEEEEE---------------CCGSS-TTSBSSEEEEEEEES
T ss_pred             EEEEEEEeCCC-hhHHHHHHhccccCC------C---ceEEEee-ccC-----------CccccCCCcEEeeEEEEEEec
Confidence            35678999999 889999999886211      0   0111111 000           0000000 0114555677887


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEE
Q 022835          102 ---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus       102 ---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel  144 (291)
                         |+.++.+++.+.+  +-.+     . ..+++.+.||.+..+-|
T Consensus        63 ~~~Dl~~L~~~le~~~--~fid-----K-k~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   63 KDFDLAALKSHLEEQE--FFID-----K-KEKFLVTSDPSQIELWF  100 (101)
T ss_dssp             -S--HHHHHHHTTTS---EE-------T-T-SEEEEE-TTS-EEEE
T ss_pred             CcccHHHHHHHhcccc--eEec-----C-CceEEEEECCcceEEEe
Confidence               5778888888743  2221     1 22347789999876644

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=80.04  E-value=3.1  Score=27.81  Aligned_cols=48  Identities=10%  Similarity=-0.028  Sum_probs=33.9

Q ss_pred             chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhH
Q 022835          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~  285 (291)
                      +..++.+.+    ++.|+++..-.....  +++.++..|.||+.+|+.-++.-.
T Consensus        30 ~~~~~~~~l----~~~G~~v~~ve~~~~--g~yev~~~~~dG~~~ev~vD~~tG   77 (83)
T PF13670_consen   30 SIEQAVAKL----EAQGYQVREVEFDDD--GCYEVEARDKDGKKVEVYVDPATG   77 (83)
T ss_pred             CHHHHHHHH----HhcCCceEEEEEcCC--CEEEEEEEECCCCEEEEEEcCCCC
Confidence            457788888    999996544322122  357888999999999997665433

This is family M4 in the peptidase classification.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	291
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		4e-39
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		2e-30
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		7e-32
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		3e-22
3zi1_A	330	Crystal Structure Of Human Glyoxalase Domain-contai		2e-24
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		6e-12
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		2e-11
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		1e-11
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		6e-11
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		1e-11
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		3e-11
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		3e-11
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		1e-10
3bqx_A	150	High Resolution Crystal Structure Of A Glyoxalase-R		5e-04

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  158 bits (399), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 92/124 (74%)
Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61
Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121
Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  129 bits (324), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/130 (49%), Positives = 86/130 (66%), Gaps = 4/130 (3%)
Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 213
           L   MLRVGDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62
Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
           V +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I    DPDG
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDG 118
Query: 274 WKTVLVDNED 283
           +K  L++ +D
Sbjct: 119 YKIELIEEKD 128

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score =  134 bits (337), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 69/125 (55%), Positives = 84/125 (67%), Gaps = 5/125 (4%)
Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           RR LH + RVGDLDR+IKFYTE  GMK+LRK DVPE+KY+  FLG+GPE S  V+ELTYN
Sbjct: 7   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 66
Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
           YGVTSY     +GH AI  EDV +LV ++R         P   +  +  +AFV DPDGY 
Sbjct: 67  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHD-----VPIDYEDESGFMAFVVDPDGYY 121
Query: 142 FELIQ 146
            EL+ 
Sbjct: 122 IELLN 126

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/140 (41%), Positives = 80/140 (57%), Gaps = 13/140 (9%)
Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 213
           +   M+RVGDL RSIKFY + LGMK+LR  D PE KYTL  LGY  E  +TVLELTYNYG
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68
Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTK--ITSFVDP 271
           VT Y    AY  +AI  +DV           +EL   + +   PI   +    +   VDP
Sbjct: 69  VTSYKHDEAYGHIAIGVEDV-----------KELVADMRKHDVPIDYEDESGFMAFVVDP 117
Query: 272 DGWKTVLVDNEDFLKELQSE 291
           DG+   L++ +  +++ +++
Sbjct: 118 DGYYIELLNEKTMMEKAEAD 137

>pdb|3ZI1|A Chain A, Crystal Structure Of Human Glyoxalase Domain-containing Protein 4 (glod4) Length = 330

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 131/286 (45%), Gaps = 51/286 (17%)
Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPE 70
           RR LH V++VG+  +T +FY +  GMK+LR  +  E            K+S   +GFGPE
Sbjct: 26  RRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 85
Query: 71  QSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTH 130
             HFV ELTYNYGV  Y +G  F    +A+    + V N R       +   PL      
Sbjct: 86  DDHFVAELTYNYGVGDYKLGNDFMGITLASS---QAVSNAR-------KLEWPLTEVAEG 135
Query: 131 IAFVKDPDGYIFELIQRG-PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK 189
           +   + P GY F L  R  P  +P+ +V L V DL +S+ ++   LGMK+    ++ +  
Sbjct: 136 VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQR- 194
Query: 190 YTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST--------DDVYKSAE--- 238
              A+LGYA  D    LEL    G  ++    A+ ++A S         +D+ K      
Sbjct: 195 ---ALLGYA--DNQCKLELQGVKGGVDHAA--AFGRIAFSCPQKELPDLEDLMKRENQKI 247
Query: 239 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF 284
           +  LV+ +  GK T Q          +    DPDG +   V +E F
Sbjct: 248 LTPLVSLDTPGKATVQ----------VVILADPDGHEICFVGDEAF 283

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 32/158 (20%)
Query: 17  PKKDKRRFL--HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF------- 67
           P    + FL    + R+ D  +++ FYT   G+ LL+K D P  K+S  FL +       
Sbjct: 23  PDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIP 82
Query: 68  --GPEQSHF------VVELTYNYG-----VTSYDIGT----GFGHFAIATEDVYKLVENI 110
               E++ +       +ELT+N+G       SY  G     GFGH  IA  DVY   +  
Sbjct: 83  KDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 142
Query: 111 RAKGGNVTREP--GPLKGGTTHIAFVKDPDGYIFELIQ 146
              G    ++P  G +KG    +AF++DPDGY  E++ 
Sbjct: 143 EELGVKFVKKPDDGKMKG----LAFIQDPDGYWIEILN 176

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 48/194 (24%)
Query: 120 EPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           EP P   G T     +   DPD    + +        L Q MLR+ D  +S+ FY + LG
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54
Query: 177 MKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE----- 216
           + LL+ +D P  K++L  L Y +++               +   LELT+N+G  +     
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS 114
Query: 217 YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GPIPGLNTKITSFV- 269
           Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     +F+ 
Sbjct: 115 YHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL-----AFIQ 165
Query: 270 DPDG-WKTVLVDNE 282
           DPDG W  +L  N+
Sbjct: 166 DPDGYWIEILNPNK 179

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 30/147 (20%)
Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS------------- 72
             + RV D  +++ FYT   GM L++K D P  K+S  FL +  +               
Sbjct: 33  QTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWAL 92
Query: 73  --HFVVELTYNYG-----VTSYDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP 121
                +ELT+N+G       SY  G     GFGH  IA  DVY   +     G    ++P
Sbjct: 93  SRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKP 152
Query: 122 --GPLKGGTTHIAFVKDPDGYIFELIQ 146
             G +KG    +AF++DPDGY  E++ 
Sbjct: 153 DDGKMKG----LAFIQDPDGYWIEILN 175

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 48/194 (24%)
Query: 120 EPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           EP P  GG T    ++   D D    + +        L Q MLRV D  +S+ FY + LG
Sbjct: 2   EPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQQTMLRVKDPKKSLDFYTRVLG 53
Query: 177 MKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE----- 216
           M L++  D P  K++L  L Y +++               +   LELT+N+G  +     
Sbjct: 54  MTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQS 113
Query: 217 YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GPIPGLNTKITSFV- 269
           Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     +F+ 
Sbjct: 114 YHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL-----AFIQ 164
Query: 270 DPDG-WKTVLVDNE 282
           DPDG W  +L  N+
Sbjct: 165 DPDGYWIEILNPNK 178

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 30/147 (20%)
Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS------------- 72
             + RV D  +++ FYT   GM L++K D P  K+S  FL +  +               
Sbjct: 37  QTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWAL 96
Query: 73  --HFVVELTYNYG-----VTSYDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP 121
                +ELT+N+G       SY  G     GFGH  IA  DVY   +     G    ++P
Sbjct: 97  SRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKP 156
Query: 122 --GPLKGGTTHIAFVKDPDGYIFELIQ 146
             G +KG    +AF++DPDGY  E++ 
Sbjct: 157 DDGKMKG----LAFIQDPDGYWIEILN 179

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 48/199 (24%)
Query: 115 GNVTREPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFY 171
           G+   EP P  GG T    ++   D D    + +        L Q MLRV D  +S+ FY
Sbjct: 1   GSHMAEPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQQTMLRVKDPKKSLDFY 52
Query: 172 EKALGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE 216
            + LGM L++  D P  K++L  L Y +++               +   LELT+N+G  +
Sbjct: 53  TRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTED 112
Query: 217 -----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GPIPGLNTKI 265
                Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL    
Sbjct: 113 DETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL---- 164
Query: 266 TSFV-DPDG-WKTVLVDNE 282
            +F+ DPDG W  +L  N+
Sbjct: 165 -AFIQDPDGYWIEILNPNK 182

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 30/145 (20%)
Query: 28  VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS--------------- 72
           + RV D  +++ FYT   GM L++K D P  K+S  FL +  +                 
Sbjct: 35  MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSR 94
Query: 73  HFVVELTYNYG-----VTSYDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP-- 121
              +ELT+N+G       SY  G     GFGH  IA  DVY   +     G    ++P  
Sbjct: 95  KATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDD 154
Query: 122 GPLKGGTTHIAFVKDPDGYIFELIQ 146
           G +KG    +AF++DPDGY  +++ 
Sbjct: 155 GKMKG----LAFIQDPDGYWIQILN 175

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 48/194 (24%)
Query: 120 EPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           EP P  GG T    ++   D D    + +        L + MLRV D  +S+ FY + LG
Sbjct: 2   EPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQETMLRVKDPKKSLDFYTRVLG 53
Query: 177 MKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE----- 216
           M L++  D P  K++L  L Y +++               +   LELT+N+G  +     
Sbjct: 54  MTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQS 113
Query: 217 YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GPIPGLNTKITSFV- 269
           Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     +F+ 
Sbjct: 114 YHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL-----AFIQ 164
Query: 270 DPDG-WKTVLVDNE 282
           DPDG W  +L  N+
Sbjct: 165 DPDGYWIQILNPNK 178

>pdb|3BQX|A Chain A, High Resolution Crystal Structure Of A Glyoxalase-Related Enzyme From Fulvimarina Pelagi Length = 150

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 31  VGDLDRTIKFYTECFGMKLLRKRDVPEEKY--SNAFLGFGPEQSHFVVELTYNYG--VTS 86
           +GDL+ + +FY E FG   + +   PE  +   N F+      +  V  L  + G  VTS
Sbjct: 13  IGDLEASARFYGEGFGWAPVFRN--PEIIFYQXNGFV----LATWLVQNLQEDVGVAVTS 66
Query: 87  YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP-GPLKGGTTHIAFVKDPDGYIFEL 144
                   H   A  +V  L E + A GG + R    P  GG     +V DPDG+I+E+
Sbjct: 67  RPGSXALAHNVRAETEVAPLXERLVAAGGQLLRPADAPPHGGLR--GYVADPDGHIWEI 123

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	291
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	3e-62
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	3e-37
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	4e-61
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	7e-39
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	3e-45
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	3e-32
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	2e-39
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	5e-21
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	3e-36
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	5e-20
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	3e-34
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	1e-16
2p25_A	126	Glyoxalase family protein; structural genomics, MC	4e-33
2p25_A	126	Glyoxalase family protein; structural genomics, MC	1e-15
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	7e-33
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	6e-12
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	6e-07
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	6e-31
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	3e-17
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	4e-29
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	1e-17
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	1e-26
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	2e-11
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-26
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-13
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	5e-25
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	1e-11
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	9e-24
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-11
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	9e-23
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	2e-10
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	6e-20
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	2e-06
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	2e-19
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	5e-15
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	3e-19
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	3e-06
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	7e-19
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	4e-17
3huh_A	152	Virulence protein STM3117; structural genomics, ny	6e-18
3huh_A	152	Virulence protein STM3117; structural genomics, ny	6e-06
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	2e-17
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	8e-05
3ghj_A	141	Putative integron gene cassette protein; integron	7e-17
3ghj_A	141	Putative integron gene cassette protein; integron	5e-05
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	9e-17
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	6e-07
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	4e-16
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	6e-04
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	6e-16
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	2e-05
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	8e-16
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	4e-06
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-15
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-05
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	7e-15
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	6e-07
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	1e-14
1nki_A	135	Probable fosfomycin resistance protein; potassium	1e-14
1nki_A	135	Probable fosfomycin resistance protein; potassium	4e-04
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	1e-14
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	2e-09
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	3e-14
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	2e-06
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-14
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-07
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	6e-14
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	7e-14
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	6e-05
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	8e-14
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	6e-09
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	1e-13
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	1e-04
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	1e-13
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	6e-05
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	3e-13
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	8e-04
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	4e-13
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	5e-13
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	7e-06
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	8e-13
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	9e-13
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	2e-12
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	5e-12
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	4e-08
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	1e-11
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	7e-05
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-11
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-04
2i7r_A	118	Conserved domain protein; structural genomics cons	2e-11
2i7r_A	118	Conserved domain protein; structural genomics cons	1e-06
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	4e-11
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	6e-04
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	8e-11
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	8e-06
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	9e-11
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	2e-10
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	5e-10
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-09
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-07
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	5e-09
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	4e-04
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	2e-08
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	2e-04
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	3e-08
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	4e-08
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	4e-08
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	2e-04
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	6e-08
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	8e-08
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	1e-07
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	2e-07
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	6e-07
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	1e-06
1xy7_A	166	Unknown protein; structural genomics, protein stru	3e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-06
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	8e-06
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	2e-04
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	3e-04

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  192 bits (490), Expect = 3e-62
 Identities = 72/143 (50%), Positives = 87/143 (60%), Gaps = 5/143 (3%)

Query: 21  KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
            RR LH + RVGDLDR+IKFYTE  GMK+LRK DVPE+KY+  FLG+GPE S  V+ELTY
Sbjct: 6   SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTY 65

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
           NYGVTSY     +GH AI  EDV +LV ++R     +  E       +  +AFV DPDGY
Sbjct: 66  NYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYED-----ESGFMAFVVDPDGY 120

Query: 141 IFELIQRGPTPEPLCQVMLRVGD 163
             EL+      E     M   G 
Sbjct: 121 YIELLNEKTMMEKAEADMKEQGT 143

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  128 bits (323), Expect = 3e-37
 Identities = 55/136 (40%), Positives = 77/136 (56%), Gaps = 9/136 (6%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
             M+RVGDL RSIKFY + LGMK+LR  D PE KYTL  LGY  E  +TVLELTYNYGVT
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVT 70

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWK 275
            Y    AY  +AI  +DV +    +    ++    I  +          +   VDPDG+ 
Sbjct: 71  SYKHDEAYGHIAIGVEDVKELVADM----RKHDVPIDYEDES-----GFMAFVVDPDGYY 121

Query: 276 TVLVDNEDFLKELQSE 291
             L++ +  +++ +++
Sbjct: 122 IELLNEKTMMEKAEAD 137

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  189 bits (482), Expect = 4e-61
 Identities = 74/132 (56%), Positives = 93/132 (70%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQRGPTPEPL 154
           ELI+       L
Sbjct: 122 ELIEEKDAGRGL 133

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  132 bits (334), Expect = 7e-39
 Identities = 64/133 (48%), Positives = 87/133 (65%), Gaps = 4/133 (3%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
             MLRVGDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV 
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVD 64

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWK 275
           +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I    DPDG+K
Sbjct: 65  KYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYK 120

Query: 276 TVLVDNEDFLKEL 288
             L++ +D  + L
Sbjct: 121 IELIEEKDAGRGL 133

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  150 bits (379), Expect = 3e-45
 Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 34/186 (18%)

Query: 1   MAEASPAAA---NAELLEW-----PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRK 52
           MAE  PA++   +           P          + R+ D  +++ FYT   G+ LL+K
Sbjct: 1   MAEPQPASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQK 60

Query: 53  RDVPEEKYSNAFLGFGPE---------------QSHFVVELTYNYGV-----TSYDIG-- 90
            D P  K+S  FL +  +                    +ELT+N+G       SY  G  
Sbjct: 61  LDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNS 120

Query: 91  --TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG 148
              GFGH  IA  DVY   +     G    ++P    G    +AF++DPDGY  E++   
Sbjct: 121 DPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDD--GKMKGLAFIQDPDGYWIEILNPN 178

Query: 149 PTPEPL 154
                +
Sbjct: 179 KIATII 184

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  116 bits (292), Expect = 3e-32
 Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 43/195 (22%)

Query: 120 EPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           EP P   G T     +   DPD    + +        L Q MLR+ D  +S+ FY + LG
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54

Query: 177 MKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE----- 216
           + LL+ +D P  K++L  L Y +++               +   LELT+N+G  +     
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS 114

Query: 217 YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DP 271
           Y  GN+    +  + I+  DVY + +      +ELG K  ++P        K  +F+ DP
Sbjct: 115 YHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGK---MKGLAFIQDP 167

Query: 272 DGWKTVLVDNEDFLK 286
           DG+   +++      
Sbjct: 168 DGYWIEILNPNKIAT 182

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score =  134 bits (339), Expect = 2e-39
 Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 6/137 (4%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           +  H    V  +   + FY     +KLL   D+P +    AFL  G  +   +  L+   
Sbjct: 8   KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEES 67

Query: 83  GVTSY--DIGTGFGHFAIATEDVYKLVENIRAKGGNV-TREPGPLKGGTTHIAFV--KDP 137
            +  +    G G  H AI  + + + ++ ++  G  +   EP P   G   +AF+  +  
Sbjct: 68  PIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQ-VAFLHPRSA 126

Query: 138 DGYIFELIQRGPTPEPL 154
            G ++E  ++    E L
Sbjct: 127 RGVLYEFCEKKEQAENL 143

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 86.4 bits (214), Expect = 5e-21
 Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 7/118 (5%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
            + + V  +   + FY  +L +KLL   D P     +A L   E     +  L+    + 
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIA 70

Query: 216 EYTK--GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDP 271
           ++ +  G     +AI    + +  + V    +E G ++     P+PG      +F+ P
Sbjct: 71  KFIQKRGEGIHHIAIGVKSIEERIQEV----KENGVQMI-NDEPVPGARGAQVAFLHP 123

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score =  125 bits (316), Expect = 3e-36
 Identities = 28/131 (21%), Positives = 50/131 (38%), Gaps = 7/131 (5%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  H    V DL++   FY    G ++     +PE   S  F+  G  +   +  L  +
Sbjct: 4   GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLD 63

Query: 82  YGVTSY---DIGTGFGHFAIATEDVYKLVENIRAKGGNV-TREPGPLKGGTTHIAFV--K 135
             +  +   +   G  H  I  +++   V +++ K     + E      G   + F+  K
Sbjct: 64  SPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKP-VIFLHPK 122

Query: 136 DPDGYIFELIQ 146
           D  G + EL Q
Sbjct: 123 DCGGVLVELEQ 133

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 82.9 bits (205), Expect = 5e-20
 Identities = 20/124 (16%), Positives = 45/124 (36%), Gaps = 11/124 (8%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
            V + V DL ++  FY+  LG ++   V  PE+  ++  +         +  L  +  + 
Sbjct: 8   HVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIA 67

Query: 216 EY---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV--- 269
            +    K      + I  D++  +   +    ++   +   +     G + K   F+   
Sbjct: 68  GFLQKNKAGGMHHICIEVDNINAAVMDL----KKKKIRSLSEE-VKIGAHGKPVIFLHPK 122

Query: 270 DPDG 273
           D  G
Sbjct: 123 DCGG 126

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  120 bits (302), Expect = 3e-34
 Identities = 30/133 (22%), Positives = 47/133 (35%), Gaps = 10/133 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHF----VVE 77
           +   H    V D D++ +FY    G +++R+   P+       L  G  +       + +
Sbjct: 4   KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTD 63

Query: 78  LTYNYGVTSYDI---GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGT-THIAF 133
             Y              G  H A   EDV    + + A G  +  E       T   +AF
Sbjct: 64  SNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALG--IRVEEVRYDDYTGKKMAF 121

Query: 134 VKDPDGYIFELIQ 146
             DPDG   EL +
Sbjct: 122 FFDPDGLPLELHE 134

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 74.0 bits (182), Expect = 1e-16
 Identities = 26/124 (20%), Positives = 43/124 (34%), Gaps = 12/124 (9%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGY----AEEDQTTVLELTYNY 212
           V L V D  +S +FY   LG +++R   +P+       L       E     + +  Y  
Sbjct: 9   VALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCA 68

Query: 213 GVTEYTKGNAYAQ---VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV 269
                +          +A   +DV  S + +      LG ++            K+  F 
Sbjct: 69  PPERISWPREACGLRHLAFYVEDVEASRQEL----IALGIRVEE-VRYDDYTGKKMAFFF 123

Query: 270 DPDG 273
           DPDG
Sbjct: 124 DPDG 127

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  117 bits (294), Expect = 4e-33
 Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 4/126 (3%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +   H      +   T  FY E  G ++LR+   PE+      L  G ++          
Sbjct: 4   KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEI-FISDQF 62

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGT-THIAFVKDPDGY 140
               SY    G  H A   E + +++  +  +G  +  EP  +   T   + F  DPDG 
Sbjct: 63  PARPSYPEALGLRHLAFKVEHIEEVIAFLNEQG--IETEPLRVDDFTGKKMTFFFDPDGL 120

Query: 141 IFELIQ 146
             EL +
Sbjct: 121 PLELHE 126

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 70.9 bits (174), Expect = 1e-15
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 8/118 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V +   +   +  FY + LG ++LR   +PE       L      +  +           
Sbjct: 9   VAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLG-SQELEIFISDQFPARPS 67

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPDG 273
           Y +      +A   + + +    +     E G  I  +P  +     K  +F  DPDG
Sbjct: 68  YPEALGLRHLAFKVEHIEEVIAFL----NEQG--IETEPLRVDDFTGKKMTFFFDPDG 119

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score =  121 bits (304), Expect = 7e-33
 Identities = 53/255 (20%), Positives = 77/255 (30%), Gaps = 36/255 (14%)

Query: 31  VGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGVTSYD 88
             D     KFYT  FG        VP     YS A L         V  +          
Sbjct: 40  TTDQSAAKKFYTSLFGWGY-DDNPVPGGGGVYSMATLNGEA-----VAAIAPMPPGAPEG 93

Query: 89  IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG 148
           +   +  + IA +DV  +V+ +   GG V      + G    ++F+ DP G    L Q  
Sbjct: 94  MPPIWNTY-IAVDDVDAVVDKVVPGGGQVMMPAFDI-GDAGRMSFITDPTGAAVGLWQAN 151

Query: 149 P--------TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE 200
                        L    L       ++ FYE  +G+            Y +   G AE 
Sbjct: 152 RHIGATLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEV 211

Query: 201 DQTTVLELTYNYGVTEYTKGN--AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPI 258
                       G  E        +  V  + DD   +A          GG++  +P  I
Sbjct: 212 -----------GGCMEPPMPGVPNHWHVYFAVDDADATAAKA----AAAGGQVIAEPADI 256

Query: 259 PGLNTKITSFVDPDG 273
           P    +     DP G
Sbjct: 257 PS-VGRFAVLSDPQG 270

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 63.4 bits (154), Expect = 6e-12
 Identities = 23/136 (16%), Positives = 37/136 (27%), Gaps = 14/136 (10%)

Query: 16  WPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFV 75
               +    +         D  + FY    G+          + Y     G         
Sbjct: 157 TLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEV----- 211

Query: 76  VELTYNYGVTSYDIGTGFGHFAI--ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF 133
                  G     +     H+ +  A +D         A GG V  EP  +       A 
Sbjct: 212 ------GGCMEPPMPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSV-GRFAV 264

Query: 134 VKDPDGYIFELIQRGP 149
           + DP G IF +++  P
Sbjct: 265 LSDPQGAIFSVLKAAP 280

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 48.8 bits (116), Expect = 6e-07
 Identities = 21/115 (18%), Positives = 34/115 (29%), Gaps = 10/115 (8%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYT 218
           L+  D   + KFY    G         P      +M   A  +   V  +          
Sbjct: 38  LQTTDQSAAKKFYTSLFGWG-YDDNPVPGGGGVYSM---ATLNGEAVAAIAPMPPGAPEG 93

Query: 219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
               +    I+ DDV    + V       GG++      I     +++   DP G
Sbjct: 94  MPPIWN-TYIAVDDVDAVVDKV----VPGGGQVMMPAFDIGDA-GRMSFITDPTG 142

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score =  111 bits (280), Expect = 6e-31
 Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 14/133 (10%)

Query: 23  RFLHAVYR--VGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
           + L  + R  V DL+  ++FY E     +  + ++P+     A +      +        
Sbjct: 4   KILQILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIA-------- 55

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
             G                 + + K    +   G  + R P  +  G      V+  DG 
Sbjct: 56  --GSEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRN--MTVRHSDGS 111

Query: 141 IFELIQRGPTPEP 153
           + E ++       
Sbjct: 112 VIEYVEHSKIEAE 124

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 76.0 bits (187), Expect = 3e-17
 Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 16/124 (12%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
             L V DL  +++FYE+ L   +    + P+    LA +        T+L +    G  E
Sbjct: 10  SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS-------TILLI---AGSEE 59

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKT 276
             K     Q     D + K    +    +E G +I R P  +P    +  +    DG   
Sbjct: 60  ALKPFRNTQATFLVDSLDKFKTFL----EENGAEIIRGPSKVPT--GRNMTVRHSDGSVI 113

Query: 277 VLVD 280
             V+
Sbjct: 114 EYVE 117

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score =  106 bits (267), Expect = 4e-29
 Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 10/131 (7%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           +  H  Y V ++D  +K +     ++          K    F+  G  +    VEL    
Sbjct: 7   KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYR----VELVAPD 62

Query: 83  GVTS-----YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG-GTTHIAFVKD 136
           G  S        G+   H     ED+ K +E +   G  + ++           +AF+  
Sbjct: 63  GEDSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 137 PDGYIFELIQR 147
            D  + EL+++
Sbjct: 123 TDIGLIELLEK 133

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 76.7 bits (189), Expect = 1e-17
 Identities = 17/123 (13%), Positives = 45/123 (36%), Gaps = 14/123 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           +   V ++  ++K +++   ++    V     K  +  +          +EL    G   
Sbjct: 11  IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGG----YRVELVAPDGEDS 66

Query: 217 -----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-D 270
                  KG+    +    +D+ KS E +     ++G  + ++    P ++ +  +F+  
Sbjct: 67  PINKTIKKGSTPYHICYEVEDIQKSIEEM----SQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 271 PDG 273
            D 
Sbjct: 123 TDI 125

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score =  101 bits (252), Expect = 1e-26
 Identities = 25/138 (18%), Positives = 38/138 (27%), Gaps = 8/138 (5%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--------KYSNAFLGFGPEQSH 73
           R+  H    V D+  +  FY    G+  L   +VP          K +N     G     
Sbjct: 18  RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDL 77

Query: 74  FVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF 133
           F                T   H A   +               +    GP+   T    +
Sbjct: 78  FGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVY 137

Query: 134 VKDPDGYIFELIQRGPTP 151
             DPDG++ E+       
Sbjct: 138 FYDPDGFMIEIRCDPEAE 155

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 60.3 bits (146), Expect = 2e-11
 Identities = 23/125 (18%), Positives = 32/125 (25%), Gaps = 12/125 (9%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPE--------YKYTLAMLGYAEEDQTTVLEL 208
           + L V D+  S  FY   LG+  L   + P          K    +              
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE 82

Query: 209 TYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSF 268
                            +A   D       V  +   E    I    GP+     +   F
Sbjct: 83  LSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVI--GENKIAIA--HGPVTRPTGRGVYF 138

Query: 269 VDPDG 273
            DPDG
Sbjct: 139 YDPDG 143

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score =  100 bits (251), Expect = 1e-26
 Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 5/127 (3%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R       V D  +   FYT   G  +     V  +++        P+ +  ++E + + 
Sbjct: 26  RIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHA 85

Query: 83  GVTSYD---IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
            VT +    +  G    + A +D+    E + A G   T+EP  +       A + D  G
Sbjct: 86  AVTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVV--TAILDDTCG 143

Query: 140 YIFELIQ 146
            + +L+Q
Sbjct: 144 NLIQLMQ 150

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 65.9 bits (160), Expect = 2e-13
 Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 9/123 (7%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 213
           +    + V D  ++  FY   LG  +   V     ++   +   A +    +LE + +  
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 214 VTEYTKGNAYAQV---AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVD 270
           VT + +      +   + + DD+    E +      LG + T++P  +           D
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERL----SALGVRFTQEPTDMGP--VVTAILDD 140

Query: 271 PDG 273
             G
Sbjct: 141 TCG 143

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 95.8 bits (238), Expect = 5e-25
 Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 9/128 (7%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           +  H      +L++  +FY   FG       +   + +++ FL F        +E+    
Sbjct: 3   KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFE---DGARLEIMSRT 59

Query: 83  GVTS--YDIGTGFGHFAIA---TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDP 137
            VT        G+ H AI+    E V +L E +R  G  +  EP    G   + + V DP
Sbjct: 60  DVTGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGYYESVVLDP 118

Query: 138 DGYIFELI 145
           +G   E+ 
Sbjct: 119 EGNRIEIT 126

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 60.0 bits (145), Expect = 1e-11
 Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 9/120 (7%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V L   +L +  +FY    G       +     +    L + +      LE+     VT 
Sbjct: 7   VALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDG---ARLEIMSRTDVTG 63

Query: 217 YTKGNA--YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV-DPDG 273
            T G    +A +AIST       E+   + ++ G  I     P    +    S V DP+G
Sbjct: 64  KTTGENLGWAHIAISTGTKEAVDELTEKL-RQDGFAIAG--EPRMTGDGYYESVVLDPEG 120

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 93.2 bits (231), Expect = 9e-24
 Identities = 21/133 (15%), Positives = 47/133 (35%), Gaps = 16/133 (12%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHF----VVELTY 80
           +       D++ +  F+ +  G ++  +R  P+E++   +L                  +
Sbjct: 7   VVPELYCFDINVSQSFFVDVLGFEVKYER--PDEEF--VYLTLDGVDVMLEGIAGKSRKW 62

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGP---LKGGTTHIA----F 133
             G   + +G+G  +F     D+  L + +     +           + G +        
Sbjct: 63  LSGDLEFPLGSGV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFM 121

Query: 134 VKDPDGYIFELIQ 146
           V+ PDGY+F   Q
Sbjct: 122 VQTPDGYLFRFCQ 134

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 60.0 bits (145), Expect = 2e-11
 Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 8/121 (6%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE--DQTTVLELTYNYGVT 215
            L   D+  S  F+   LG ++    ++P+ ++    L   +   +        +  G  
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKY--ERPDEEFVYLTLDGVDVMLEGIAGKSRKWLSGDL 67

Query: 216 EYTKGNAYAQVAISTDDVYKS-AEVVNLVTQELGGKITRQPGPIPGLNTKITSF--VDPD 272
           E+  G+          D+      V       +   +  +             F    PD
Sbjct: 68  EFPLGSGVN-FQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPD 126

Query: 273 G 273
           G
Sbjct: 127 G 127

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 90.7 bits (225), Expect = 9e-23
 Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 22/144 (15%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDV-----------PEEKYSNAFLGFGPE 70
            R  +    V  LD  I F+ E  G+ L  + +V             +    A +     
Sbjct: 10  LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTP-- 66

Query: 71  QSHFVVELTYNYGVTSYDI-------GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGP 123
             H  +EL+      +            G+       ED+ ++V  +   G  +  E   
Sbjct: 67  DGHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQ 126

Query: 124 LKGGTTHIAFVKDPDGYIFELIQR 147
               +  + +++  +G +  L + 
Sbjct: 127 -YENSYRLCYIRGVEGILIGLAEE 149

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 56.8 bits (137), Expect = 2e-10
 Identities = 18/135 (13%), Positives = 43/135 (31%), Gaps = 26/135 (19%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDK-----------PEYKYTLAMLGYAEEDQTTV 205
           V + V  L  +I F+E  +G+ L    +                  +AM+     D  + 
Sbjct: 15  VSIVVESLDNAISFFE-EIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVT--PDGHSR 71

Query: 206 LELTYNYGVTEYTKGNA-------YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPI 258
           +EL+                    Y +V  + +D+ +    +     + G ++  +    
Sbjct: 72  IELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQY 127

Query: 259 PGLNTKITSFVDPDG 273
              + ++      +G
Sbjct: 128 EN-SYRLCYIRGVEG 141

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 83.7 bits (207), Expect = 6e-20
 Identities = 22/134 (16%), Positives = 37/134 (27%), Gaps = 14/134 (10%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVE---- 77
              +       DLD    FY + FG++++ K           F   G +           
Sbjct: 7   SAIMETALYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESS 61

Query: 78  LTYNYGVTSYDIGTGFGHFAI---ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFV 134
                         G GHF        +V +      A    V        G  +   ++
Sbjct: 62  RADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYS--VYI 119

Query: 135 KDPDGYIFELIQRG 148
           +DP G   E+ +  
Sbjct: 120 RDPAGNSVEVGEGK 133

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 16/122 (13%), Positives = 30/122 (24%), Gaps = 14/122 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYT-----LAMLGYAEEDQTTVLELTYN 211
             L   DL  +  FY    G++++  +      +      L +    E  +         
Sbjct: 12  TALYADDLDAAEAFYRDVFGLEMVLKLPGQLVFFKCGRQMLLLFDPQESSRADANNPIPR 71

Query: 212 YGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDP 271
           +G                 DD  +  E      + L   +           +      DP
Sbjct: 72  HG------AVGQGHFCFYADDKAEVDEWKTRF-EALEIPVE--HYHRWPNGSYSVYIRDP 122

Query: 272 DG 273
            G
Sbjct: 123 AG 124

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 81.5 bits (201), Expect = 2e-19
 Identities = 26/118 (22%), Positives = 41/118 (34%), Gaps = 5/118 (4%)

Query: 31  VGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIG 90
             D DR   FY + FG  +    ++P+  YS    G   E          N G+      
Sbjct: 33  FDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEV 89

Query: 91  TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG 148
           T      +  E +   +E I + GG       P+ G     A+  D +G +  L +  
Sbjct: 90  TTPV-VTVDVESIESALERIESLGGKTVTGRTPV-GNMGFAAYFTDSEGNVVGLWETA 145

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 69.9 bits (171), Expect = 5e-15
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 9/124 (7%)

Query: 150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELT 209
               +    +   D  R+  FY  A G  +    + P+  Y++   G   E         
Sbjct: 22  MTGRIVHFEIPFDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGY 78

Query: 210 YNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV 269
            N G+ +  +      V +  + +  + E +    + LGGK      P+  +      F 
Sbjct: 79  INGGMMQRGEVTT-PVVTVDVESIESALERI----ESLGGKTVTGRTPVGNM-GFAAYFT 132

Query: 270 DPDG 273
           D +G
Sbjct: 133 DSEG 136

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 80.6 bits (199), Expect = 3e-19
 Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 12/123 (9%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV 84
           +     VG  +    FY E  GM+ + K +   +K    +   G ++ H  VE  +N   
Sbjct: 14  VQVAAPVGCEEEARAFYGETIGMEEIPKPEEL-KKRGGCWFKCGNQEIHIGVEQNFNPA- 71

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
                     H A     + +  + +  +G  V  +            +V DP G   E 
Sbjct: 72  -------KRAHPAFYVLKIDEFKQELIKQGIEVIDDH-ARPDV--IRFYVSDPFGNRIEF 121

Query: 145 IQR 147
           ++ 
Sbjct: 122 MEN 124

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 44.4 bits (105), Expect = 3e-06
 Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 16/118 (13%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
           QV   VG    +  FY + +GM+ +   ++ + +         +E     + +    GV 
Sbjct: 15  QVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQE-----IHI----GVE 65

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
           +       A  A     + +  + +     + G ++       P          DP G
Sbjct: 66  QNFNPAKRAHPAFYVLKIDEFKQEL----IKQGIEVIDDH-ARPD--VIRFYVSDPFG 116

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 80.0 bits (197), Expect = 7e-19
 Identities = 23/123 (18%), Positives = 39/123 (31%), Gaps = 12/123 (9%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
             G LD  I+FY E   +K + +       Y     G      H   E T   G ++  +
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHNG-YDGVMFGLPHADYHL--EFTQYEGGSTAPV 74

Query: 90  GTGFGHFAIA---TEDVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFEL 144
                          ++  +   ++  G        P    GG T    ++DPDG+    
Sbjct: 75  PHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVT----IEDPDGWRIVF 130

Query: 145 IQR 147
           +  
Sbjct: 131 MNS 133

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 75.3 bits (185), Expect = 4e-17
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 6/123 (4%)

Query: 160 RVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK 219
             G L   I+FYE+ L +K +    +    Y   M G         LE T   G +    
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGL--PHADYHLEFTQYEGGSTAPV 74

Query: 220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV 279
            +  + +     +  + A + + + + +G +        P  +    +  DPDGW+ V +
Sbjct: 75  PHPDSLLVFYVPNAVELAAITSKL-KHMGYQEVESEN--PYWSNGGVTIEDPDGWRIVFM 131

Query: 280 DNE 282
           +++
Sbjct: 132 NSK 134

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 78.1 bits (192), Expect = 6e-18
 Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 8/127 (6%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  H V  V D+  TI+FY E  G   +  +       +   L FG ++ +   +    
Sbjct: 22  DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEF 75

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIA--FVKDPDG 139
               S           I +  +  +V  I   G ++   P    G T  I   +++DPDG
Sbjct: 76  EPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

Query: 140 YIFELIQ 146
            + E+ Q
Sbjct: 136 NLIEISQ 142

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 44.6 bits (105), Expect = 6e-06
 Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 12/119 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           ++L V D+  +I+FYE+ LG   +       +K     L +  +      +         
Sbjct: 27  LVLTVSDISTTIRFYEEVLGFSAVT------FKQNRKALIFGAQKINLHQQEMEFEPKAS 80

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITS--FVDPDG 273
                +     I++  +      +     + G  I   P    G   +I S    DPDG
Sbjct: 81  RPTPGSADLCFITSTPINDVVSEI----LQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 74.6 bits (184), Expect = 7e-17
 Identities = 22/128 (17%), Positives = 49/128 (38%), Gaps = 19/128 (14%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +       +V +L+++ +FYTE  G +          +++  ++  G      + E   N
Sbjct: 27  KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLD--SARRWNFLWVS-GRAGMVVLQEEKEN 83

Query: 82  YGVTSYDIGTGFGHFA--IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIA--FVKDP 137
           +            HF+  +   ++  L + + +KG +V    GP+          +  DP
Sbjct: 84  WQQQ---------HFSFRVEKSEIEPLKKALESKGVSVH---GPVNQEWMQAVSLYFADP 131

Query: 138 DGYIFELI 145
           +G+  E  
Sbjct: 132 NGHALEFT 139

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 41.5 bits (98), Expect = 5e-05
 Identities = 8/34 (23%), Positives = 17/34 (50%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKY 190
           V ++V +L +S +FY + LG +         + +
Sbjct: 32  VAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNF 65

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 74.5 bits (183), Expect = 9e-17
 Identities = 23/120 (19%), Positives = 40/120 (33%), Gaps = 8/120 (6%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-EKYSNAFLGFGPEQSHFVVELTYNYGV 84
           H  + V DL+R  +     F  + +   D  +       F   G       + +    G 
Sbjct: 7   HMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAIMQGE 60

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
              +       F I   D  +  E +   G ++      ++G    I F  D D ++FEL
Sbjct: 61  KLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYF-YDDDNHMFEL 119

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 47.2 bits (112), Expect = 6e-07
 Identities = 18/117 (15%), Positives = 36/117 (30%), Gaps = 10/117 (8%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           +   V DL R  +  E     + +        +++L+   +        + +    G   
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREV--YASDTEQFSLSREKFFLIGD---IWVAIMQGEKL 62

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
             +   +    I   D  + AE V     +LG  +      + G   +   F D D 
Sbjct: 63  AERSYNHIAFKIDDADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDN 114

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 72.9 bits (179), Expect = 4e-16
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 11/124 (8%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +   H    V DL +++ F+ E  G+ L  + +      + A+L  G        +    
Sbjct: 3   QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQ 56

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
             V   +       F +A ED   L + +   G  + ++            +  DPDG+ 
Sbjct: 57  -YVPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQN----KSEGASFYFLDPDGHK 111

Query: 142 FELI 145
            EL 
Sbjct: 112 LELH 115

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 38.2 bits (89), Expect = 6e-04
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVD 184
           + L V DL +S+ F+ + LG+ L    +
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWN 35

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 72.2 bits (177), Expect = 6e-16
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 12/130 (9%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
              H    V  L+ +I F+    G                    +   +++ V   T + 
Sbjct: 20  MLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKHGKTYLVFVQTEDR 74

Query: 83  GVTSY--DIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREP-GPLKGGTTH-IAFVK 135
             T       TG  H A      E V +L + ++ +G  +  E   P  GG  H   F +
Sbjct: 75  FQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCE 134

Query: 136 DPDGYIFELI 145
           DP+    E++
Sbjct: 135 DPNRIKVEIV 144

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 23/119 (19%), Positives = 35/119 (29%), Gaps = 6/119 (5%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V + V  L  SI F++  LG              +            T           +
Sbjct: 24  VEINVDHLEESIAFWDWLLGELGYEDYQSWSRGKSYKHGKTYLVFVQTEDRFQTPTFHRK 83

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP-GPIPGLNTKITSFV-DPDG 273
            T  N  A  A S + V +  + +    +E G  I  +   P  G       F  DP+ 
Sbjct: 84  RTGLNHLAFHAASREKVDELTQKL----KERGDPILYEDRHPFAGGPNHYAVFCEDPNR 138

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 70.9 bits (174), Expect = 8e-16
 Identities = 25/125 (20%), Positives = 39/125 (31%), Gaps = 19/125 (15%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
              H    V D+    +F  + FG+     R        NAF         F++ L    
Sbjct: 3   GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-------NAFAVMRDN-DGFILTLMKGK 54

Query: 83  GVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
            V          H        E V K+ + ++  G     EP       T   +V+ P G
Sbjct: 55  EVQ----YPKTFHVGFPQESEEQVDKINQRLKEDG--FLVEPPKHAHAYT--FYVEAPGG 106

Query: 140 YIFEL 144
           +  E+
Sbjct: 107 FTIEV 111

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 44.3 bits (105), Expect = 4e-06
 Identities = 21/119 (17%), Positives = 37/119 (31%), Gaps = 17/119 (14%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           + L V D+  + +F EK  G+    T                 ++   +L L     V +
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNA--------FAVMRDNDGFILTLMKGKEV-Q 57

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWK 275
           Y K         S + V K  + +    +E G  +     P    +        P G+ 
Sbjct: 58  YPKTFHVGFPQESEEQVDKINQRL----KEDGFLV----EPPKHAHAYTFYVEAPGGFT 108

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 69.3 bits (170), Expect = 5e-15
 Identities = 25/127 (19%), Positives = 39/127 (30%), Gaps = 8/127 (6%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DLD + ++YTE    K L +     +  S A        S  + E        
Sbjct: 8   HVSLTVRDLDISCRWYTEILDWKELVRGR--GDTTSFAHGVLPGGLSIVLREHDGGGTDL 65

Query: 86  SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
             +   G  H + +     D+  L E +   G   T      +     I   +D D    
Sbjct: 66  FDETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFT---PTQELPFGWILAFRDADNIAL 122

Query: 143 ELIQRGP 149
           E +    
Sbjct: 123 EAMLGRE 129

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 8/118 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V L V DL  S ++Y + L  K L         +   +L       + VL      G   
Sbjct: 9   VSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP---GGLSIVLREHDGGGTDL 65

Query: 217 YTKGNAYAQ-VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
           + +       ++ S + +     +   +  + G   T            I +F D D 
Sbjct: 66  FDETRPGLDHLSFSVESMTDLDVLEERL-AKAGAAFT---PTQELPFGWILAFRDADN 119

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 72.6 bits (178), Expect = 7e-15
 Identities = 40/278 (14%), Positives = 78/278 (28%), Gaps = 54/278 (19%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H   RV D+ + ++ Y E  G+       +  +     +L    E   F + L       
Sbjct: 10  HVQLRVLDMSKALEHYVELLGLIE-----MDRDDQGRVYLKAWTEVDKFSLVLR------ 58

Query: 86  SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
                 G           + + +L  ++ A G  V + P             + P G+ F
Sbjct: 59  -EADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHF 117

Query: 143 ELI----------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           EL                        +G         ++   +L  +   + K LG  L 
Sbjct: 118 ELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVLGFYLA 177

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI---STDDVYKSA 237
             V           L        ++    ++     + +      V+    + +D+ ++A
Sbjct: 178 EQVLDENGTRVAQFL--------SLSTKAHDVAFIHHPEKGRLHHVSFHLETWEDLLRAA 229

Query: 238 EVVNLVTQELGGKITRQPGP-IPGLNTKITSFVDPDGW 274
           +++          I   P          I  F DP G 
Sbjct: 230 DLI----SMTDTSIDIGPTRHGLTHGKTIY-FFDPSGN 262

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 48.7 bits (116), Expect = 6e-07
 Identities = 23/128 (17%), Positives = 40/128 (31%), Gaps = 15/128 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            RF HA+    +L  T   +T+  G  L  +           FL    +         ++
Sbjct: 149 VRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--------AHD 200

Query: 82  YGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPG--PLKGGTTHIAFVKD 136
                +       H +      ED+ +  + I     ++   P    L  G T   +  D
Sbjct: 201 VAFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTI--YFFD 258

Query: 137 PDGYIFEL 144
           P G   E+
Sbjct: 259 PSGNRNEV 266

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 68.8 bits (168), Expect = 1e-14
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 10/126 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
               H V  V D+  T  FY +  GMK +              L FG ++ +   +L   
Sbjct: 9   SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAGR------IALEFGHQKINL-HQLGNE 61

Query: 82  YGVTSYDIGTGFGHFA-IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIA--FVKDPD 138
           +   + ++  G      I    +   ++++  +G  +   P    G    I   + +DPD
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 139 GYIFEL 144
           G + E+
Sbjct: 122 GNLIEV 127

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 68.7 bits (168), Expect = 1e-14
 Identities = 28/123 (22%), Positives = 37/123 (30%), Gaps = 14/123 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
               H    V DL  +I FY +  G +L  + D        A+L  G        E  Y 
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQYG 56

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
                Y        F IA  D  +    +RA G                  +  DPDG+ 
Sbjct: 57  GPAADYT----HYAFGIAAADFARFAAQLRAHG----VREWKQNRSEGDSFYFLDPDGHR 108

Query: 142 FEL 144
            E 
Sbjct: 109 LEA 111

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDK 185
           + L V DL  SI FY   LG +L    D+
Sbjct: 8   LTLAVADLPASIAFYRDLLGFRLEARWDQ 36

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 68.4 bits (167), Expect = 1e-14
 Identities = 29/146 (19%), Positives = 50/146 (34%), Gaps = 13/146 (8%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           RF++ +  V D++R+  FY +  G+K+L         +     GF   +   + E  +  
Sbjct: 8   RFVNPIPFVRDINRSKSFYRDRLGLKILED----FGSFVLFETGFAIHEGRSLEETIWRT 63

Query: 83  GVTSYDI-GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
              + +  G           DV    ++I A    +         G        DPDG+ 
Sbjct: 64  SSDAQEAYGRRNMLLYFEHADVDAAFQDI-APHVELIHPLERQAWGQRVF-RFYDPDGHA 121

Query: 142 FELIQRGPTPEPLCQVMLRVGDLGRS 167
            E+       E L Q    +   G S
Sbjct: 122 IEVG------ESLSQSGENLYFQGGS 141

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 54.5 bits (131), Expect = 2e-09
 Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 11/121 (9%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 213
               +  V D+ RS  FY   LG+K+L         + L   G+A  +  ++ E  +   
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKILEDFG----SFVLFETGFAIHEGRSLEETIWRTS 64

Query: 214 V-TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 272
              +   G     +     DV  + + +         ++            ++  F DPD
Sbjct: 65  SDAQEAYGRRNMLLYFEHADVDAAFQDI-----APHVELIHPLERQAW-GQRVFRFYDPD 118

Query: 273 G 273
           G
Sbjct: 119 G 119

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 67.2 bits (164), Expect = 3e-14
 Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DL++T  F    F  + +      ++ +S +   F        + +    G +
Sbjct: 7   HITLIVKDLNKTTAFLQNIFNAEEI--YSSGDKTFSLSKEKF---FLIAGLWICIMEGDS 61

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
             +       F I +E+V +  E I+A G  + +   P   G     +  D D ++FEL
Sbjct: 62  LQERTYNHIAFQIQSEEVDEYTERIKALGVEM-KPERPRVQGEGRSIYFYDFDNHLFEL 119

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 45.2 bits (107), Expect = 2e-06
 Identities = 17/119 (14%), Positives = 37/119 (31%), Gaps = 14/119 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           + L V DL ++  F +     + +      +  ++L+   +        + +     + E
Sbjct: 8   ITLIVKDLNKTTAFLQNIFNAEEIY--SSGDKTFSLSKEKFFLIAGLW-ICIMEGDSLQE 64

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQEL--GGKITRQPGPIPGLNTKITSFVDPDG 273
                 Y  +A          E V+  T+ +   G   +   P      +   F D D 
Sbjct: 65  ----RTYNHIAFQIQS-----EEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDN 114

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 67.3 bits (164), Expect = 4e-14
 Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 12/132 (9%)

Query: 19  KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP---EEKYSNAFLGFGPEQSHFV 75
           K+     +      D+     FY + FG + +     P         + +GF   +++ +
Sbjct: 4   KNMADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYEL 63

Query: 76  VELTYNYGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIA 132
           ++L         +               E V KLV    A G  + + P          A
Sbjct: 64  MQLAQF-----SETSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQ-A 117

Query: 133 FVKDPDGYIFEL 144
            + DP+  +F +
Sbjct: 118 VLLDPERNVFRI 129

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 49.2 bits (117), Expect = 1e-07
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 8/119 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V +   D+     FY++  G + + ++  P ++           +     EL      +E
Sbjct: 12  VNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLAQFSE 71

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQ--ELGGKITRQPGPIPGLNTKITSFVDPDG 273
            +       +    D       V  LV      G  + + P      +      +DP+ 
Sbjct: 72  TSGI--KFLLNFDVDTK---EAVDKLVPVAIAAGATLIKAPYETYY-HWYQAVLLDPER 124

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 66.7 bits (162), Expect = 6e-14
 Identities = 20/132 (15%), Positives = 33/132 (25%), Gaps = 11/132 (8%)

Query: 17  PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVV 76
             ++     H      DLD    FY    G KL R+            +         V 
Sbjct: 3   AMRNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP--------DRITLDFFGDQLVC 54

Query: 77  ELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP---GPLKGGTTHIAF 133
            L+  +          FG      +    L +  + +G     +               F
Sbjct: 55  HLSDRWDREVSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFF 114

Query: 134 VKDPDGYIFELI 145
           + DP   + E  
Sbjct: 115 LIDPSNNLLEFK 126

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 66.6 bits (162), Expect = 7e-14
 Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 10/127 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           RR  H V  V  +  T  FY++  GM+++  ++          L FG +Q   + E+   
Sbjct: 26  RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFG-DQKFNLHEVGKE 78

Query: 82  YGVTSYDIGTGFGHFA-IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIA--FVKDPD 138
           +   +     G      I    + +++++++A    +   P P  G    I   + +DPD
Sbjct: 79  FEPKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPD 138

Query: 139 GYIFELI 145
             + E+ 
Sbjct: 139 RNLIEVS 145

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 41.6 bits (97), Expect = 6e-05
 Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 12/119 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           +++ V  +  +  FY K LGM+++   +          L + ++                
Sbjct: 31  IVMTVKSIKDTTMFYSKILGMEVMTFKEDR------KALCFGDQKFNLHEVGKEFEPKAA 84

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITS--FVDPDG 273
           +    +     I+   + +  + +    +     I   P P  G    I S  F DPD 
Sbjct: 85  HPVPGSLDICLITEVPLEEMIQHL----KACDVPIEEGPVPRTGAKGPIMSIYFRDPDR 139

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 66.6 bits (162), Expect = 8e-14
 Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 9/126 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVEL--- 78
           ++       +GDL+ + +FY E FG   + +           +   G   + ++V+    
Sbjct: 4   QQVAVITLGIGDLEASARFYGEGFGWAPVFRNPEII-----FYQMNGFVLATWLVQNLQE 58

Query: 79  TYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
                VTS        H   A  +V  L+E + A GG + R             +V DPD
Sbjct: 59  DVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADA-PPHGGLRGYVADPD 117

Query: 139 GYIFEL 144
           G+I+E+
Sbjct: 118 GHIWEI 123

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 52.7 bits (126), Expect = 6e-09
 Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 15/121 (12%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK----YTLAMLGYAEEDQTTVLELTYNY 212
           + L +GDL  S +FY +  G   +    +  +     + LA        +   + +T   
Sbjct: 9   ITLGIGDLEASARFYGEGFGWAPVFRNPEIIFYQMNGFVLATWLVQNLQEDVGVAVTSRP 68

Query: 213 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 272
           G        A A    +  +V    E +       GG++ R     P    +     DPD
Sbjct: 69  G------SMALAHNVRAETEVAPLMERL----VAAGGQLLRPADAPPHGGLRGY-VADPD 117

Query: 273 G 273
           G
Sbjct: 118 G 118

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 69.2 bits (169), Expect = 1e-13
 Identities = 39/264 (14%), Positives = 77/264 (29%), Gaps = 34/264 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +    V DL ++ +FY +  G+ +  + +      +  +L    E  H  + L    G  
Sbjct: 20  YMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLR--QGPI 71

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
           +      +     +  +V       +  G    R       G      V+DP G+ +E  
Sbjct: 72  AAVAAFAYR--VKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFF 129

Query: 146 ---------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKY 190
                                  L        D+ R   + E  LG ++   +   +   
Sbjct: 130 YETEHVERLTQRYDLYSAGELVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVT 188

Query: 191 TLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGK 250
             A +   +    T L            + +  A       ++ +  +   +    +  +
Sbjct: 189 YAAWMHRKQTVHDTAL------TGGNGPRMHHVAFATHEKHNIIQICD--KMGALRISDR 240

Query: 251 ITRQPGPIPGLNTKITSFVDPDGW 274
           I R PG     N      +DPDG 
Sbjct: 241 IERGPGRHGVSNAFYLYILDPDGH 264

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 15/128 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  H      D+ R   +  E  G ++       +     A++       H       N
Sbjct: 151 VRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQ-TVHDTALTGGN 208

Query: 82  YGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VKD 136
                   G    H A AT    ++ ++ + + A   +   E GP + G ++  +  + D
Sbjct: 209 --------GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILD 260

Query: 137 PDGYIFEL 144
           PDG+  E+
Sbjct: 261 PDGHRIEI 268

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 65.8 bits (160), Expect = 1e-13
 Identities = 31/137 (22%), Positives = 49/137 (35%), Gaps = 14/137 (10%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFL--GFGPEQSHFVVELTY 80
              H  Y   D D   K+Y E FG   L + + PE+      +       +    V++  
Sbjct: 9   CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMA 68

Query: 81  NYGVTS--------YDIGTGFGHFAIATEDVYKLVENIRAKGGNV-TREPGPLKGGTTHI 131
                S        ++   G  H A   +D+  +   +R +G  +   EP    GG   I
Sbjct: 69  PLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR-I 127

Query: 132 AFV--KDPDGYIFELIQ 146
            F+  K   G + EL Q
Sbjct: 128 NFMHPKSGKGVLIELTQ 144

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 41.2 bits (96), Expect = 6e-05
 Identities = 20/134 (14%), Positives = 43/134 (32%), Gaps = 16/134 (11%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAML--GYAEEDQTTVLELTYNYG 213
            V     D   + K+Y++  G   L   + PE      M+       +  T +++     
Sbjct: 12  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 71

Query: 214 --------VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKI 265
                   + ++        +A   DD+   +       +E G ++     P  G     
Sbjct: 72  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSA----TLRERGVQLL-YDEPKLGTGGNR 126

Query: 266 TSFVDP-DGWKTVL 278
            +F+ P  G   ++
Sbjct: 127 INFMHPKSGKGVLI 140

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 64.0 bits (156), Expect = 3e-13
 Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R + A     +  R   FY +  GM +                   P ++H  V      
Sbjct: 7   RRVVANIATPEPARAQAFYGDILGMPVAMDHGWI------VTHA-SPLEAHAQVSFAREG 59

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           G      GT     +I  ++  ++   I   G  +   P     G     F++DP G + 
Sbjct: 60  GS-----GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLI 113

Query: 143 ELIQRG 148
            ++   
Sbjct: 114 NILSHA 119

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 37.4 bits (87), Expect = 8e-04
 Identities = 19/116 (16%), Positives = 31/116 (26%), Gaps = 17/116 (14%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY 217
            +   +  R+  FY   LGM +    D               E    V          E 
Sbjct: 12  NIATPEPARAQAFYGDILGMPVAM--DHGWI----VTHASPLEAHAQVSFA------REG 59

Query: 218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
             G     ++I  D+  +    +     + G  I   P        ++    DP G
Sbjct: 60  GSGTDVPDLSIEVDNFDEVHARI----LKAGLPIEYGPVTEAWGVQRLF-LRDPFG 110

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 67.6 bits (165), Expect = 4e-13
 Identities = 37/212 (17%), Positives = 62/212 (29%), Gaps = 40/212 (18%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  HA  RV +L+  I FY    G+          +     +     E+ H    +   
Sbjct: 7   LRPGHAQVRVLNLEEGIHFYRNVLGLVE-----TGRDDQGRVYFKCWDERDHSCYIIR-- 59

Query: 82  YGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREP-GPLKGGTTHIAFVKDP 137
                     G   F         + KL  +++A G   TR P G +      + F + P
Sbjct: 60  -----EADTAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF-ELP 113

Query: 138 DGYIFELI----------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKAL 175
            G++ EL                       + G  P  L   +L   ++    K + + L
Sbjct: 114 SGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEVL 173

Query: 176 GMKL-LRTVDKPEYKYTLAMLGYAEEDQTTVL 206
           G  L  R +           L  + +      
Sbjct: 174 GFYLVERVLSPDGDSDMGIWLSCSHKVHDIAF 205

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 67.3 bits (164), Expect = 5e-13
 Identities = 21/178 (11%), Positives = 54/178 (30%), Gaps = 36/178 (20%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
            A         T+ F+T+  GM +  +         + +L    +   + +++T      
Sbjct: 14  RAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKIT--EAPE 65

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
           +            + E + +  +++     + T        G     + + PDG+  +L+
Sbjct: 66  AGMGHAAMR--TSSPEALERRAKSLTDGNVDGTWSEDQFGYG-KTFEY-QSPDGHNLQLL 121

Query: 146 ------------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
                                    +G   + +  + L   D+      +E+ LG + 
Sbjct: 122 WEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTAVKDSFERHLGFRT 179

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 45.8 bits (108), Expect = 7e-06
 Identities = 23/128 (17%), Positives = 33/128 (25%), Gaps = 14/128 (10%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +R  H      D+      +    G +   +R V       A++                
Sbjct: 152 KRIDHLNLMSSDVTAVKDSFERHLGFR-TTERVVDGNVEIGAWMSSNLLGHEVACMRDMT 210

Query: 82  YGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VKD 136
            G           H A      +     VE  R     +   P   K G T   F  V +
Sbjct: 211 GG------HGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPD--KHGITQSQFLYVFE 262

Query: 137 PDGYIFEL 144
           P G   EL
Sbjct: 263 PGGNRIEL 270

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 66.6 bits (162), Expect = 9e-13
 Identities = 45/264 (17%), Positives = 77/264 (29%), Gaps = 34/264 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +A   V DL ++  FY +  G+ +  + +      +  +L    E  H  + LT   G  
Sbjct: 20  YAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLT--KGPV 71

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
           +      F       EDV K     +  G    R       G      V+DP G+ +E  
Sbjct: 72  AALKAMAFR--VRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFF 129

Query: 146 ---------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKY 190
                                  L        D+ R  K+ E  LG ++   +   E   
Sbjct: 130 FETTHVERLHMRYDLYSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTT 188

Query: 191 TLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGK 250
             A +        T              + +  A       ++ +  +   +    +  +
Sbjct: 189 YAAWMHRKGTVHDTA------LTGGNGPRLHHVAFSTHEKHNIIQICD--KMGALRISDR 240

Query: 251 ITRQPGPIPGLNTKITSFVDPDGW 274
           I R PG     N      +DPD  
Sbjct: 241 IERGPGRHGVSNAFYLYILDPDNH 264

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 65.1 bits (158), Expect = 2e-12
 Identities = 31/180 (17%), Positives = 55/180 (30%), Gaps = 32/180 (17%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
                      +LDR + FYT   G + + ++           +  G  Q  F       
Sbjct: 25  TSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQF------- 71

Query: 82  YGVTSYDIGTGFGHFA--IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIA---FVKD 136
               + D    F H A  IA     +    +   G  +T             A   +V+D
Sbjct: 72  --RAAADGTKPFYHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVED 129

Query: 137 PDGYIFELIQRGPTPEP------------LCQVMLRVGDLGRSIKFYEKALGMKLLRTVD 184
           P G I ELI R                  + ++ +   D+ ++    ++A     L  ++
Sbjct: 130 PSGNIIELISRQQAAPVLDKPFSADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQIE 189

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 64.3 bits (156), Expect = 5e-12
 Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 24/181 (13%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY--G 83
           H      + +    FY    G++ + K  V ++  S   L +G +      EL++     
Sbjct: 33  HISMVTKNANENNHFYKNVLGLRRV-KMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPL 91

Query: 84  VTSYDIGTG-FGHFAIATEDVYKLVE-NIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
           V     GT       +       L     R +  +V             + F +D +G  
Sbjct: 92  VGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQF-EDAEGLR 150

Query: 142 FELIQRGPTPEPLCQ------------------VMLRVGDLGRSIKFYEKALGMKLLRTV 183
             L+          +                  V L V  L +      +  G   +   
Sbjct: 151 LVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRN 210

Query: 184 D 184
           D
Sbjct: 211 D 211

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 52.7 bits (126), Expect = 4e-08
 Identities = 23/132 (17%), Positives = 41/132 (31%), Gaps = 12/132 (9%)

Query: 21  KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
            +        V  LD+     TE FG        V        F     E    +V    
Sbjct: 178 IQGMGSVELTVRRLDKMASTLTEIFGYTE-----VSRNDQEAIFQSIKGEAFGEIVVKYL 232

Query: 81  NYGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDP 137
           +        G    H AI      ++    E ++ +G + +   G +        + ++ 
Sbjct: 233 DGPTEKPGRG-SIHHLAIRVKNDAELAYWEEQVKQRGFHSS---GIIDRFYFKSLYFRES 288

Query: 138 DGYIFELIQRGP 149
           +G +FE+   GP
Sbjct: 289 NGILFEIATDGP 300

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 60.2 bits (146), Expect = 1e-11
 Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 4/124 (3%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
              D DR + +    FG +LL ++        +A L  G      +V  T      S   
Sbjct: 9   AYTDPDRAVDWLVRVFGFRLLLRQP-AIGTIRHADLDTG--GGIVMVRRTGEPYTVSCAG 65

Query: 90  GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP 149
           G       +   DV +      A G ++ +       G      V+D +G+++E  +   
Sbjct: 66  GHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWG-LRQYLVRDLEGHLWEFTRHLR 124

Query: 150 TPEP 153
              P
Sbjct: 125 DVPP 128

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 40.9 bits (96), Expect = 7e-05
 Identities = 20/117 (17%), Positives = 33/117 (28%), Gaps = 8/117 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V L   D  R++ +  +  G +LL            A L         ++  T       
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIG-TIRHADLDTG--GGIVMVRRTGEPYTVS 62

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
              G+   QV +   DV +            G  I +     P    +     D +G
Sbjct: 63  CAGGHTCKQVIVWVSDVDEHFMRS----TAAGADIVQPLQDKPW-GLRQYLVRDLEG 114

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 62.6 bits (152), Expect = 2e-11
 Identities = 40/169 (23%), Positives = 66/169 (39%), Gaps = 27/169 (15%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFL-GFGPEQSHFVVELTYNYGV 84
           +  Y V D D    FY + +G++ + +        +NA+    G ++ H VV+L      
Sbjct: 11  YVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADE-HHVVQLR--RAD 61

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIF 142
            +          A +  DV  L  ++ A G  V  EP  L   GG     F   PDG +F
Sbjct: 62  ENRIDVIALA--ADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFF-SPDGLLF 118

Query: 143 EL-----------IQRGPT-PEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           E+           + R    P  +  ++L   +    +KF+   LG K+
Sbjct: 119 EVSSDVAKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKV 167

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 24/129 (18%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE-QSHFVVELTY 80
            +  H V    +    +KF+T+  G K+    D   +     FL          ++    
Sbjct: 140 VKISHIVLHSPNHQDMVKFFTDVLGFKV---SDWLGDFM--CFLRCNSAHHRIAILPGP- 193

Query: 81  NYGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VK 135
                         H A      +D+ +    ++ KG ++   PG  +    +  F    
Sbjct: 194 ----------PCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPG--RHTAGNNTFSYFV 241

Query: 136 DPDGYIFEL 144
            P G++ E 
Sbjct: 242 TPGGFVTEY 250

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 59.0 bits (143), Expect = 2e-11
 Identities = 20/126 (15%), Positives = 35/126 (27%), Gaps = 14/126 (11%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYN 81
                   V ++ +           K     D   +    +  L     Q+H V    + 
Sbjct: 5   NLNQLDIIVSNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLS--QNHLVPLENFQ 62

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
            G+             I  EDV +  + +   G  V   P     GT     V+ P G +
Sbjct: 63  SGII----------IHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLV 111

Query: 142 FELIQR 147
            +  + 
Sbjct: 112 LDFYRM 117

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 45.6 bits (108), Expect = 1e-06
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 18/121 (14%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAE-EDQTTVLELTYNY 212
           L Q+ + V ++ +     E  L  K     D           G+A+    +  L L+ N+
Sbjct: 6   LNQLDIIVSNVPQVCADLEHILDKKADYAND-----------GFAQFTIGSHCLMLSQNH 54

Query: 213 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD 272
            V      +    + I  +DV ++ + +     ELG K+   P       T+      P 
Sbjct: 55  LVPLENFQSG-IIIHIEVEDVDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPA 108

Query: 273 G 273
           G
Sbjct: 109 G 109

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 58.7 bits (142), Expect = 4e-11
 Identities = 24/131 (18%), Positives = 42/131 (32%), Gaps = 8/131 (6%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD----VPEEKYSNAFLGFGPEQSHFVVEL 78
           R       V D+ ++++FY +  G+++  + D              L +       V   
Sbjct: 4   RISLFAVVVEDMAKSLEFYRK-LGVEIPAEADSAPHTEAVLDGGIRLAWDTV--ETVRSY 60

Query: 79  TYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
              +   +             T  V K    +   G     +P     G  + A VKDPD
Sbjct: 61  DPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPD 119

Query: 139 GYIFELIQRGP 149
           G + +L    P
Sbjct: 120 GNVVDLFAPLP 130

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 38.3 bits (89), Expect = 6e-04
 Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 4/118 (3%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
              + V D+ +S++FY   LG+++    D   +     + G       TV  +       
Sbjct: 7   LFAVVVEDMAKSLEFYR-KLGVEIPAEADSAPH-TEAVLDGGIRLAWDTVETVRSYDPEW 64

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
           +   G     +A    D     +    +  + G +   +P        +     DPDG
Sbjct: 65  QAPTGGHRFAIAFEFPDTASVDKKYAEL-VDAGYEGHLKPWNAVW-GQRYAIVKDPDG 120

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 57.7 bits (139), Expect = 8e-11
 Identities = 20/125 (16%), Positives = 31/125 (24%), Gaps = 12/125 (9%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
                      L   + FY    G +    +     +   A              L    
Sbjct: 6   LITSITINTSHLQGMLGFY-RIIGFQFTASKVDKGSEVHRAVHN------GVEFSLYSIQ 58

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGG-NVTREPGPLKGGTTHIAFVKDPDGYI 141
                              D+ K V+ +    G     +P  +  G    A V DPDG+ 
Sbjct: 59  NPQRS--QIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDG--KKAIVLDPDGHS 114

Query: 142 FELIQ 146
            EL +
Sbjct: 115 IELCE 119

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 43.4 bits (102), Expect = 8e-06
 Identities = 18/118 (15%), Positives = 35/118 (29%), Gaps = 14/118 (11%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
            + +    L   + FY   +G +   +      +   A+             L Y+    
Sbjct: 9   SITINTSHLQGMLGFYR-IIGFQFTASKVDKGSEVHRAVHN------GVEFSL-YSIQNP 60

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
           +        Q+     D+    + V  + +  G      P  +P     I   +DPDG
Sbjct: 61  Q-RSQIPSLQLGFQITDL---EKTVQELVKIPGAMCILDPTDMPDGKKAI--VLDPDG 112

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3 Length = 418

 Score = 61.1 bits (147), Expect = 9e-11
 Identities = 39/287 (13%), Positives = 75/287 (26%), Gaps = 51/287 (17%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
             F H      D       ++   G  L  + D+     ++A L        F+    Y 
Sbjct: 30  LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYA 89

Query: 82  YGVTSYDI-----------------GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPL 124
           +G  +                    G      A+   D         A G      P  L
Sbjct: 90  HGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDL 149

Query: 125 KG----------GTTHIAFVKDPDGYI-------FELIQRGPTPEP----LCQVMLRVGD 163
                       G   + +V  PDG         FE +      +        ++  V +
Sbjct: 150 GRGFRLAEVELYGDVVLRYVSYPDGAAGEPFLPGFEGVASPGAADYGLSRFDHIVGNVPE 209

Query: 164 LGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGY-AEEDQTTVLELTYNYGVT------- 215
           L  +  ++    G          +     + L      + +  + L  N  V        
Sbjct: 210 LAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQ 269

Query: 216 -----EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGP 257
                ++  G     +A+++DDV ++   +   +   G +    P  
Sbjct: 270 IQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPPTS 316

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 59.5 bits (144), Expect = 2e-10
 Identities = 26/178 (14%), Positives = 49/178 (27%), Gaps = 40/178 (22%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +  + V D+     F T+  G+      D      +            + + +       
Sbjct: 7   YMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSR--AWRIAVQ------ 52

Query: 86  SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPL---KGGTTHIAFVKDPDG 139
                               + ++ + ++  G  VT     L   +G T  I F  DP G
Sbjct: 53  -QGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFA-DPFG 110

Query: 140 YIFELI------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
              E+                         + L   +  V D  +++ FY   LG +L
Sbjct: 111 LPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFYTDVLGFQL 168

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 56.4 bits (136), Expect = 5e-10
 Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 29/147 (19%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--------------EEKYSNAFLGF 67
           R  +     V D++ +++ Y E FG++  +                   + +   AF   
Sbjct: 18  RNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL 77

Query: 68  GPEQSHFVVELTYNYGVTSY------DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP 121
           GP Q    +EL       S         G G  H A   +D+ + VE +  KG  V ++ 
Sbjct: 78  GPLQ----LELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQK- 132

Query: 122 GPLKGGTTHIAFV--KDPDGYIFELIQ 146
           G  +GG    A++        + EL++
Sbjct: 133 GDFEGG--RYAYIDTLRALKVMIELLE 157

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 57.4 bits (138), Expect = 1e-09
 Identities = 23/178 (12%), Positives = 47/178 (26%), Gaps = 23/178 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRK---RDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           H    VG       FY    G++L+++    D P   +       G   +          
Sbjct: 11  HITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGA 70

Query: 83  GVTSYDIGT-GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
                  G  G   + +    +    + +       T      + G  ++ F  DP G  
Sbjct: 71  RQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYT---KIERFGEQYVEF-DDPHGLH 126

Query: 142 FELIQRGPTPEPLCQ---------------VMLRVGDLGRSIKFYEKALGMKLLRTVD 184
            E+++R                          L      ++    E  +G++ +    
Sbjct: 127 LEIVEREEGEANTWTFGEVTPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG 184

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 50.9 bits (121), Expect = 1e-07
 Identities = 20/136 (14%), Positives = 35/136 (25%), Gaps = 13/136 (9%)

Query: 17  PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVV 76
           P    + F  A       D+T        G++ + K                 +  + + 
Sbjct: 147 PDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDIGNVID 200

Query: 77  ELTYNYGVTSYDIGTGFGHFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAF 133
                 G      GT   H A    D          I + G  VT           +  +
Sbjct: 201 LKLTPIGRGQMGAGT-VHHIAWRANDDEDQLDWQRYIASHGYGVT---PVRDRNYFNAIY 256

Query: 134 VKDPDGYIFELIQRGP 149
            ++    +FE+    P
Sbjct: 257 FREHGEILFEIATDPP 272

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 55.4 bits (133), Expect = 5e-09
 Identities = 24/176 (13%), Positives = 47/176 (26%), Gaps = 29/176 (16%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           R   +      D+    ++  +  GM                +L      +  VV    +
Sbjct: 4   RSLGYLRIEATDMAAWREYGLKVLGMVE-----GKGAPEGALYLRMDDFPARLVVVPGEH 58

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDG 139
             +         G      E + ++   +  +G                  +    DP G
Sbjct: 59  DRL------LEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSG 112

Query: 140 YIFELI-------QRGPTPEP---------LCQVMLRVGDLGRSIKFYEKALGMKL 179
              E+        +R  +P           +  V+L   D   ++ FY   LG +L
Sbjct: 113 NCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRL 168

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 40.3 bits (94), Expect = 4e-04
 Identities = 17/137 (12%), Positives = 38/137 (27%), Gaps = 22/137 (16%)

Query: 21  KRRFLHAVYRVGDLDRTIKFYTECFGMKL--------LRKRDVPEEKYSNAFLGFGPEQS 72
           ++   H V    D    + FY +  G +L               +   +         + 
Sbjct: 140 EQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRH 199

Query: 73  HFVVELTYNYGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTT 129
           H +               +G  H  +     +DV   ++    +   ++   G  +    
Sbjct: 200 HSL-------AFLPMPTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLG--RHVND 250

Query: 130 HIAF--VKDPDGYIFEL 144
            +    +K P G+  E 
Sbjct: 251 LMLSFYMKTPGGFDIEF 267

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 51.0 bits (122), Expect = 2e-08
 Identities = 15/126 (11%), Positives = 31/126 (24%), Gaps = 15/126 (11%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV 84
           +     + D+   +  + +  G +L  +        + A+L         + E       
Sbjct: 9   ITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKIIP 62

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAK----GGNVTREPGPLKGGTTHIAFVKDPDGY 140
                G       I   D+  L   +         +       +  G      V+ PDG 
Sbjct: 63  D----GIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREF-QVRMPDGD 117

Query: 141 IFELIQ 146
                 
Sbjct: 118 WLNFTA 123

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 20/118 (16%), Positives = 33/118 (27%), Gaps = 15/118 (12%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAE-EDQTTVLELTYNYGVTE 216
            L + D+  ++  +   LG +L                 YA  E     L L        
Sbjct: 12  FLHIPDMQEALTLFCDTLGFELKYRHS-----------NYAYLELSGCGLRLLEEPARKI 60

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIP-GLNTKITSFVDPDG 273
              G A   + I   D+      ++   + L          +P G   +      PDG
Sbjct: 61  IPDGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYG--QREFQVRMPDG 116

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 50.3 bits (120), Expect = 3e-08
 Identities = 22/130 (16%), Positives = 36/130 (27%), Gaps = 20/130 (15%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
                  D D T  FY    G  ++ +            L  G     F       +   
Sbjct: 6   TPNLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEF-------FAHP 51

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTT------HIAFVKDPDG 139
             D    +    +  +D+ +     ++ G   T    P             +A + DPDG
Sbjct: 52  GLDPLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDG 111

Query: 140 YIFELIQRGP 149
            +  LIQ   
Sbjct: 112 TLLRLIQNEL 121

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 50.9 bits (121), Expect = 4e-08
 Identities = 19/133 (14%), Positives = 39/133 (29%), Gaps = 15/133 (11%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
             ++ V +  ++ +FY      + +      E   + A            + L     + 
Sbjct: 9   LVLFYVKNPAKSEEFYKNLLDTQPI------ESSPTFAMFVMKTG---LRLGLWAQEEIE 59

Query: 86  -SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
                  G    +      E V ++      K  ++ + P  +  G T      DPD + 
Sbjct: 60  PKAHQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYT--FVGVDPDEHR 117

Query: 142 FELIQRGPTPEPL 154
             +     T E L
Sbjct: 118 LRIFCLKRTAENL 130

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 50.4 bits (120), Expect = 4e-08
 Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 15/129 (11%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
                +  V +   + +FY    G+         E   + +            + L   +
Sbjct: 25  HPDFTILYVDNPPASTQFYKALLGVD------PVESSPTFSLFVLANG---MKLGLWSRH 75

Query: 83  GVT-SYDIGTGFGHFAIA---TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
            V     +  G G  A        V +     +A G  + ++P  ++ G T      DPD
Sbjct: 76  TVEPKASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYT--FTAADPD 133

Query: 139 GYIFELIQR 147
            +   +   
Sbjct: 134 SHRLRVYAF 142

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 23/131 (17%), Positives = 41/131 (31%), Gaps = 14/131 (10%)

Query: 144 LIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQT 203
           L  +G    P    +L V +   S +FY+  LG+        P +               
Sbjct: 17  LYFQGHMTHPD-FTILYVDNPPASTQFYKALLGVD--PVESSPTF-------SLFVLANG 66

Query: 204 TVLELTYNYGVTEYTKGNA-YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLN 262
             L L   + V           ++A   ++  +  E      +  G  + +QP  +    
Sbjct: 67  MKLGLWSRHTVEPKASVTGGGGELAFRVENDAQVDETFAGW-KASGVAMLQQPAKMEFGY 125

Query: 263 TKITSFVDPDG 273
           T   +  DPD 
Sbjct: 126 T--FTAADPDS 134

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A* Length = 393

 Score = 52.2 bits (124), Expect = 6e-08
 Identities = 46/271 (16%), Positives = 86/271 (31%), Gaps = 49/271 (18%)

Query: 17  PKKDKRRFL---HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH 73
            K ++ RFL      + VG+  +   FY    G + L  R +               +  
Sbjct: 2   AKPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIV 61

Query: 74  FVVELTYN-----YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK--G 126
           FV+    N      G      G G    A   ED   +V+  R +G  + REP   +   
Sbjct: 62  FVLSSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKF 121

Query: 127 GTTHIAFVKDPDGYIFELIQRG-----------------PTPEPLCQVMLRV-------- 161
           G    A ++        L+++                  P    L +  L +        
Sbjct: 122 GKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEMIDHIVGNQ 181

Query: 162 --GDLGRSIKFYEKALGMKLLRTVDKPEY--KYTL----AMLGYAEEDQTTVLELTYNYG 213
              ++  + ++Y K L      +VD  +   +Y+      +  Y E  +  + E      
Sbjct: 182 PDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKK 241

Query: 214 VT------EYTKGNAYAQVAISTDDVYKSAE 238
            +      +Y  G     +A+ T+D+  +  
Sbjct: 242 KSQIQEYVDYNGGAGVQHIALKTEDIITAIR 272

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 51.5 bits (123), Expect = 8e-08
 Identities = 24/174 (13%), Positives = 50/174 (28%), Gaps = 32/174 (18%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +  + V D+     F T+  G+               A      +++  +       G  
Sbjct: 7   YLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYR-ADQRAWRIA---VQPGEL 56

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFE 143
                 G          + ++ + +R  G   TR    L  +     +  ++DP G   E
Sbjct: 57  DDLAYAGLE--VDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLE 114

Query: 144 LI------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           +                         + +   +  V D  +++ FY + LG  L
Sbjct: 115 IYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAKAMAFYTEVLGFVL 168

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 48.9 bits (116), Expect = 1e-07
 Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 4/124 (3%)

Query: 28  VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY 87
           VY   D+D+T+K++ E  G          E       +   P +        +       
Sbjct: 26  VYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFK 85

Query: 88  DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI---FEL 144
                     +  E +  L + ++  G +   +      G    + +   DG I   FE 
Sbjct: 86  GEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECS-ITTTDGCILRFFES 144

Query: 145 IQRG 148
           IQ G
Sbjct: 145 IQEG 148

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 50.4 bits (120), Expect = 2e-07
 Identities = 34/279 (12%), Positives = 76/279 (27%), Gaps = 57/279 (20%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +    V +LD    +     GM++     V + +    +L         V+         
Sbjct: 9   YLGLSVSNLDAWRDYAAGIMGMQV-----VDDGEDDRIYLRMDRWHHRIVLH-------- 55

Query: 86  SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGY 140
             D      +         ++ +L E ++  G                  +  + DP G 
Sbjct: 56  -ADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGN 114

Query: 141 IFELI-------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL-- 179
             E+                    +     + L  +++R  D+  + +FY          
Sbjct: 115 PTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGHIIIREDDVEEATRFYRLLGLEGAVE 174

Query: 180 LRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEV 239
            +         T   +   +   +    +          + N         DD+  + ++
Sbjct: 175 YKFALPNGAVGTPVFMHCNDRHHSLAFGVG-----PMDKRINHLMIEYTHLDDLGYAHDL 229

Query: 240 VNLVTQELGGKITRQPG--PIPGLNTKITSF--VDPDGW 274
           V    ++    +T Q G       N +  +F   +P GW
Sbjct: 230 V----RQQKIDVTLQIGKHS----NDEALTFYCANPSGW 260

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 48.8 bits (116), Expect = 6e-07
 Identities = 25/175 (14%), Positives = 50/175 (28%), Gaps = 33/175 (18%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +    V D D    F T+  G+++     + E +    +L         VV     +   
Sbjct: 12  YMGISVKDPDAWKSFATDMLGLQV-----LDEGEKDRFYLRMDYWHHRIVVH----HNGQ 62

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFE 143
                 G+        +   L + +   G  +         +     +   +DP G   E
Sbjct: 63  DDLEYLGWR--VAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTE 120

Query: 144 LI-------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           +                    +     + L   ++R  D+  + KFY   LG + 
Sbjct: 121 IFWGPRIDMSNPFHPGRPLHGKFVTGDQGLGHCIVRQTDVAEAHKFYSL-LGFRG 174

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 21/122 (17%), Positives = 37/122 (30%), Gaps = 12/122 (9%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
             +  V +++R+  FY   F  +       P               + F +       V 
Sbjct: 16  LQLVYVSNVERSTDFYRFIFKKE-------PVFVTPRYVAFPSSGDALFAIWSGGEEPVA 68

Query: 86  SYDIGTGFGHFAIATEDV---YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
                +  G      EDV   +      ++    V +EP     G      + DPDG+I 
Sbjct: 69  EIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG--RTFLISDPDGHII 126

Query: 143 EL 144
            +
Sbjct: 127 RV 128

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A Length = 166

 Score = 45.8 bits (108), Expect = 3e-06
 Identities = 21/136 (15%), Positives = 34/136 (25%), Gaps = 11/136 (8%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSN-------AFLGFGPEQSHFVVEL 78
             +     +   + FY   FG         P+ K          + L             
Sbjct: 29  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS 88

Query: 79  TYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
           +     T+   G+G   F + T+D    V      G                   V DP 
Sbjct: 89  SLPGFSTAKSEGSGV-TFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVEL-GFKGKVTDPF 146

Query: 139 GYIFELIQRG--PTPE 152
           G  +   ++    T E
Sbjct: 147 GVTWIFAEKKTVITDE 162

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 7e-06
 Identities = 48/335 (14%), Positives = 97/335 (28%), Gaps = 83/335 (24%)

Query: 3   EASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTI--KFYTECF-----GMKLLRKRDV 55
            +       + +E   +   +FL +  +      ++  + Y E         ++  K +V
Sbjct: 72  LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV 131

Query: 56  P-EEKYS---NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIR 111
              + Y     A L   P ++  +       GV       G G   +A + V    +   
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLI------DGVL------GSGKTWVALD-VCLSYKVQC 178

Query: 112 AKGGNVTREPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVM----LRVGDL 164
                +                +     P+  + E++Q+      L   +        D 
Sbjct: 179 KMDFKI------------FWLNLKNCNSPET-VLEMLQK------LLYQIDPNWTSRSDH 219

Query: 165 GRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEED-------------QTTVLELTYN 211
             +IK    ++  +L R +    Y+  L +L                      +L  T  
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVL-----LNVQNAKAWNAFNLSCKILLTTRF 274

Query: 212 YGVTEYTKGNAYAQVAIS-TDDVYKSAEVVNLVTQELGGKITRQP------GP--IPGLN 262
             VT++        +++          EV +L+ + L  +    P       P  +  + 
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA 334

Query: 263 TKITSFVD-PDGWKTVLVDN-----EDFLKELQSE 291
             I   +   D WK V  D      E  L  L+  
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 43.4 bits (102), Expect = 8e-06
 Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 8/125 (6%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV 84
              V    D+   ++F+T+  G          E+ +  A +                   
Sbjct: 7   AVPVLTARDVAEAVEFWTDRLGFSR----VFVEDDF--AGVVRDDVTLFISAVQDQVVPD 60

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
            +       G   +  E    +  N R   G    E      G      ++DP G     
Sbjct: 61  NTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGRE--FALRDPAGNCVHF 118

Query: 145 IQRGP 149
           +    
Sbjct: 119 VAEEQ 123

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3 Length = 381

 Score = 41.4 bits (96), Expect = 2e-04
 Identities = 39/263 (14%), Positives = 74/263 (28%), Gaps = 46/263 (17%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +     V+ VG+  +   +Y+  FGM+L+            A        + FV+     
Sbjct: 21  KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK 80

Query: 82  YGVTSYDI--------GTGFGHFAIATEDVYKLVENIRAKGGNVTREP--GPLKGGTTHI 131
                           G G    AI   D           G     EP     + GT  +
Sbjct: 81  PATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVL 140

Query: 132 AFVKDPDGYIFELIQRG--------------PTPEPLCQVMLRV----------GDLGRS 167
           A +         L+ R               P  EP      +           G +   
Sbjct: 141 AAIATYGKTRHTLVDRTGYDGPYLPGYVAAAPIVEPPAHRTFQAIDHCVGNVELGRMNEW 200

Query: 168 IKFYEKALGMKLLRTVDKPEY--KYTL----AMLGYAEEDQTTVLELTYNYGVT------ 215
           + FY K +G   ++     +   +Y+      +     + +  + E       +      
Sbjct: 201 VGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYL 260

Query: 216 EYTKGNAYAQVAISTDDVYKSAE 238
           E+  G     +A++T D+ ++  
Sbjct: 261 EFYGGAGVQHIALNTGDIVETVR 283

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A Length = 424

 Score = 41.1 bits (95), Expect = 3e-04
 Identities = 36/277 (12%), Positives = 74/277 (26%), Gaps = 60/277 (21%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +RF H  +  GD     + ++   GM+   K D+      +A          F+    Y+
Sbjct: 24  KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYS 83

Query: 82  YGVTSYDI-----------------------GTGFGHFAIATEDVYKLVENIRAKGGNVT 118
             +++ +I                       G G    AI  ED         A G   +
Sbjct: 84  PSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPS 143

Query: 119 REPGPLKG----------GTTHIAFVKDPDGYIFELI--------------QRGPTPEPL 154
             P  L            G   + +V        +                        L
Sbjct: 144 SPPIVLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLPGFERVEDASSFPLDYGIRRL 203

Query: 155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK------YTLAMLGYAEEDQTTVLEL 208
              +  V +LG ++ +     G          +         +  +    E     + E 
Sbjct: 204 DHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEP 263

Query: 209 TYNYGVT-------EYTKGNAYAQVAISTDDVYKSAE 238
            +            E+ +G     +A+ ++D++++  
Sbjct: 264 VHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLR 300

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	291
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	100.0
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	100.0
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	100.0
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	100.0
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	100.0
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	100.0
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	100.0
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	100.0
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	100.0
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	100.0
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	100.0
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	100.0
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	100.0
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	100.0
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	100.0
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.97
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.97
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.95
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.94
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.94
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.93
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.86
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.85
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.84
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.84
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.83
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.82
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.82
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.82
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.81
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.81
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.81
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.81
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.8
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.79
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.79
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.79
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.79
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.79
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.79
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.78
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.78
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.78
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.78
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.78
3ghj_A	141	Putative integron gene cassette protein; integron	99.78
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.77
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.77
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.77
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.76
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.76
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.76
2i7r_A	118	Conserved domain protein; structural genomics cons	99.75
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.74
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.74
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.74
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.74
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.73
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.73
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.73
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.73
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.73
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.73
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.72
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.72
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.72
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.72
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.72
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.72
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.72
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.71
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.71
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.71
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.71
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.71
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.71
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.71
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.7
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.7
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.7
3ghj_A	141	Putative integron gene cassette protein; integron	99.7
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.7
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.7
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.7
2i7r_A	118	Conserved domain protein; structural genomics cons	99.7
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.7
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.7
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.7
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.69
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.69
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.69
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.69
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.69
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.69
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.69
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.69
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.68
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.68
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.68
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.67
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.67
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.67
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.67
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.67
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.66
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.66
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.66
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.66
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.65
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.65
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.65
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.65
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.65
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.65
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.65
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.65
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.64
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.64
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.64
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.64
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.64
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.64
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.63
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.63
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.63
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.61
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.61
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.6
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.6
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.6
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.6
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.59
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.59
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.58
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.57
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.56
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.56
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.55
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.54
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.53
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.52
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.52
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.49
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.48
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.47
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.46
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.44
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.43
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.42
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.4
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.36
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.35
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.31
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.26
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.21
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.19
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.18
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.16
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.13
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.12
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.05
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.03
3l20_A	172	Putative uncharacterized protein; hypothetical pro	98.99
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	98.95
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.62
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.23
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	97.92
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.5
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.24
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	93.81
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	90.34
3iuz_A	340	Putative glyoxalase superfamily protein; struct ge	80.33

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=100.00  E-value=6.1e-35  Score=250.31  Aligned_cols=247  Identities=33%  Similarity=0.585  Sum_probs=188.0

Q ss_pred             CCCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccC-----------CCceEEEEEecCCCCcceEEEeeecCCCc
Q 022835           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-----------EEKYSNAFLGFGPEQSHFVVELTYNYGVT   85 (291)
Q Consensus        17 ~~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~l~~~~~~~~~~l~~~~~~~~~   85 (291)
                      .+|.+++|.||.|.|+|++++++||+++|||++..+...+           ++.+..+++.+++......+++.......
T Consensus        21 ~~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~  100 (330)
T 3zi1_A           21 QSMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG  100 (330)
T ss_dssp             GGCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC
T ss_pred             eecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC
Confidence            4466789999999999999999999999999998776654           44667788877765556777777665544


Q ss_pred             cccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC-CCCCceeEeeeeCCc
Q 022835           86 SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP-TPEPLCQVMLRVGDL  164 (291)
Q Consensus        86 ~~~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~-~~~~~~hv~l~v~d~  164 (291)
                      ....+.++.|+||.|+|+   +++++++|+++...+    . .  .+||+||||+.|||++... .+..+.|+.|.|.|+
T Consensus       101 ~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~----~-~--~~~~~DPdG~~iel~~~~~~~~~~i~hv~L~v~Dl  170 (330)
T 3zi1_A          101 DYKLGNDFMGITLASSQA---VSNARKLEWPLTEVA----E-G--VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDL  170 (330)
T ss_dssp             CCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEE----T-T--EEEEECTTSCEEEEESSCCTTSCSEEEEEEEESCH
T ss_pred             ccccCCCeeEEEEECchH---HHHHHHcCCceeccC----C-c--eEEEECCCCCEEEEEecCCCCCCceeEEEEECCCH
Confidence            555667899999999987   678889999987543    1 2  3889999999999999864 457799999999999


Q ss_pred             hhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec--chHHHHHHHHH
Q 022835          165 GRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DVYKSAEVVNL  242 (291)
Q Consensus       165 ~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~--d~~~~~~~l~~  242 (291)
                      +++.+||+++|||++.......+    ..++..++.  ...+++.....  ....+.+..|++|.|+  |++++.+++  
T Consensus       171 ~~a~~FY~~vLG~~~~~~~~~~~----~~~l~~g~~--~~~l~l~~~~~--~~~~~~~~~hiaf~v~~~dld~~~~rl--  240 (330)
T 3zi1_A          171 QKSLNYWCNLLGMKIYENDEEKQ----RALLGYADN--QCKLELQGVKG--GVDHAAAFGRIAFSCPQKELPDLEDLM--  240 (330)
T ss_dssp             HHHHHHHHHTTCCEEEEEETTTT----EEEEESSTT--SCEEEEEECSS--CCCCBTTCCEEEEEECGGGHHHHHHHH--
T ss_pred             HHHHHHHHHhcCCEEEeeccCCc----EEEEEeCCc--eEEEEECCCCC--CCCCCCCCceEEEEEEcccHHHHHHHH--
Confidence            99999999999999887654322    233444332  34455543221  1223457789999996  567777777  


Q ss_pred             HHHHhCCeeccCCccC--CC-CCceEEEEECCCCceEEEecchhhH
Q 022835          243 VTQELGGKITRQPGPI--PG-LNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       243 ~~~~~G~~~~~~p~~~--~~-~~~~~~~~~DPdG~~ie~~~~~~~~  285 (291)
                        +++|+++..+|...  ++ .+.+++||+|||||+|||++..++.
T Consensus       241 --~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~~~~  284 (330)
T 3zi1_A          241 --KRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAFR  284 (330)
T ss_dssp             --HHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHHHHH
T ss_pred             --HHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEecccc
Confidence              99999987776542  21 2358999999999999999987754

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=100.00  E-value=1.2e-33  Score=244.60  Aligned_cols=242  Identities=21%  Similarity=0.214  Sum_probs=181.0

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      ..|++|+||.|.|+|++++.+||+++|||+++.+..      ..+++..+.....+.+.+...       ...++.|++|
T Consensus        13 p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~-------~~~gl~~~a~   79 (365)
T 4ghg_A           13 PDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKG-------PVAALKAMAF   79 (365)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-------SSCEEEEEEE
T ss_pred             CCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccC-------CCCCcceEEE
Confidence            569999999999999999999999999999987633      135565443333333434332       1247889999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC---------------CCCCceeEeee
Q 022835           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP---------------TPEPLCQVMLR  160 (291)
Q Consensus        99 ~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~---------------~~~~~~hv~l~  160 (291)
                      .|.+   ++++.++|+++|+.+...+.....+....++|+||+|+.+||+....               .+.++.|+.+.
T Consensus        80 ~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~rlgHV~L~  159 (365)
T 4ghg_A           80 RVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQV  159 (365)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCTTTCCTTCCCEEEEEEEE
T ss_pred             EeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeeccccccccccccccccCcceeEEEEe
Confidence            9964   78899999999999876544332222234899999999999986542               14569999999


Q ss_pred             eCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHHHHHHH
Q 022835          161 VGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV  240 (291)
Q Consensus       161 v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~~~~~l  240 (291)
                      |+|++++.+||+. |||+++++....++.....++.+...  ++.+.+..       ..+++++|++|.|+|+++..+..
T Consensus       160 v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~--hH~la~~~-------~~~~~lhHvaf~v~d~d~v~~~~  229 (365)
T 4ghg_A          160 TPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGT--VHDTALTG-------GNGPRLHHVAFSTHEKHNIIQIC  229 (365)
T ss_dssp             ESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSS--SCSEEEEE-------SSBSEEEEEEEECSSHHHHHHHH
T ss_pred             ecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCc--ccceeeec-------CCCCceeEEEEecCCHHHHHHHH
Confidence            9999999999965 99999988766666556667776543  33333322       12348999999999977766655


Q ss_pred             HHHHHHhCCe--eccCCccCCCCCceEEEEECCCCceEEEecchhh
Q 022835          241 NLVTQELGGK--ITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       241 ~~~~~~~G~~--~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                       .+++++|+.  +.++|++|..+...++||+||+|++||+.....+
T Consensus       230 -d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g~~  274 (365)
T 4ghg_A          230 -DKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDYY  274 (365)
T ss_dssp             -HHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCC
T ss_pred             -HHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCCcC
Confidence             556888884  5678998877678899999999999999887654

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=100.00  E-value=2.7e-33  Score=240.16  Aligned_cols=249  Identities=12%  Similarity=0.083  Sum_probs=169.7

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCC-CceEEEEEecCCCCcceEEEeeecCCCccccCC-CCceEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIG-TGFGHF   96 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~i   96 (291)
                      +++.+|+||.|.|+|++++.+||+++|||+++.+....+ .+....++....+.....+.+...........+ .++.|+
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hi   83 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVT   83 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEEE
Confidence            568999999999999999999999999999987753322 222223333222222334555543332222223 368899


Q ss_pred             EEEeC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC---------------CCCceeEee
Q 022835           97 AIATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT---------------PEPLCQVML  159 (291)
Q Consensus        97 ~~~v~--di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~---------------~~~~~hv~l  159 (291)
                      ||.|+  |+++++++|+++|+++..  .. .++. ..+||+|||||.+||++..+.               ..+++|+.|
T Consensus        84 af~V~~~dl~~~~~rL~~~Gv~~~~--~~-~~g~-~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~v~~~~~i~gl~Hv~L  159 (335)
T 3oaj_A           84 SYVVPKGAMAFWEKRLEKFNVPYTK--IE-RFGE-QYVEFDDPHGLHLEIVEREEGEANTWTFGEVTPDVAIKGFGGATL  159 (335)
T ss_dssp             EEEECTTCHHHHHHHHHHTTCCCEE--EE-ETTE-EEEEEECTTSCEEEEEECSCSCCCCCCBTTBCTTTSCCEEEEEEE
T ss_pred             EEEecHHHHHHHHHHHHhCcceeee--ec-cCCc-EEEEEECCCCCEEEEEEeCCCCcCCCcCCCCChhhhhccccceEE
Confidence            99999  999999999999998764  22 2333 349999999999999987631               245899999


Q ss_pred             eeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc-cccCcceeeEEEEecchHHHHH
Q 022835          160 RVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTDDVYKSAE  238 (291)
Q Consensus       160 ~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~f~v~d~~~~~~  238 (291)
                      .|+|++++.+||+++|||++..+..    ....  +..++.  +..+.+........ .....+++|++|.|+|.++ +.
T Consensus       160 ~v~Dle~t~~FY~~vLG~~~~~~~~----~~~~--~~~g~~--~~~l~l~~~~~~~~~~~g~g~~~HiAf~v~d~~~-l~  230 (335)
T 3oaj_A          160 LSEQPDKTADLLENIMGLERVGKEG----DFVR--YRSAGD--IGNVIDLKLTPIGRGQMGAGTVHHIAWRANDDED-QL  230 (335)
T ss_dssp             ECSSHHHHHHHHHHTSCCEEEEEET----TEEE--EECSSS--SSCEEEEESSCCCBCBCSBTEEEEEEEEESSHHH-HH
T ss_pred             EECCHHHHHHHHHHHhCCEEeeccC----CEEE--EEeCCC--CcEEEEEeCCCCCcCCCCCcceEEEEEEcCCHHH-HH
Confidence            9999999999999999999887632    1222  222221  33444443222111 1222368999999999333 23


Q ss_pred             HHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          239 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       239 ~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      ++.++|+++|+++..... +.+  .+++||+||+|++|||+.+.+
T Consensus       231 ~~~~~L~~~G~~~~~~~~-r~~--~~siYfrDP~G~~iEl~td~p  272 (335)
T 3oaj_A          231 DWQRYIASHGYGVTPVRD-RNY--FNAIYFREHGEILFEIATDPP  272 (335)
T ss_dssp             HHHHHHHHTTCCCCCCEE-CSS--SEEEEEECTTSCEEEEEESCS
T ss_pred             HHHHHHHHCCCCcccccc-CCc--EEEEEEECCCCcEEEEEeCCC
Confidence            333444999998654333 222  478999999999999998744

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=100.00  E-value=9.7e-34  Score=242.60  Aligned_cols=240  Identities=20%  Similarity=0.231  Sum_probs=177.8

Q ss_pred             CCCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEE
Q 022835           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        17 ~~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i   96 (291)
                      +.++++++.||.|.|+|++++.+||+++|||++..+..   +   ..++...+......+.+...       ...+..|+
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~---~---~~~l~~~~~~~~~~l~l~~~-------~~~~~~~~   77 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE---N---TIYLRSLEEFIHHNLVLRQG-------PIAAVAAF   77 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS---S---EEEEECTTCCSSCSEEEEEC-------SSCEEEEE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC---C---EEEEEecCCCCcEEEEEEEC-------CCCCeeEE
Confidence            45679999999999999999999999999999876532   1   24454322221222333332       12367899


Q ss_pred             EEEe---CCHHHHHHHHHHcCCeeecCCc-cCCCCceEEEEEECCCCCEEEEEEcCCC---------------CCCceeE
Q 022835           97 AIAT---EDVYKLVENIRAKGGNVTREPG-PLKGGTTHIAFVKDPDGYIFELIQRGPT---------------PEPLCQV  157 (291)
Q Consensus        97 ~~~v---~di~~~~~~l~~~G~~~~~~~~-~~~~g~~~~~~~~dp~G~~iel~~~~~~---------------~~~~~hv  157 (291)
                      +|.|   +|+++++++|+++|+++...+. ..+++.. .++|+||+|+.+||++....               +.++.|+
T Consensus        78 ~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~DP~G~~iel~~~~~~~~~~~~~~~~~~~~~~~~l~Hv  156 (323)
T 1f1u_A           78 AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGD-SVRVEDPLGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHF  156 (323)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCS-EEEEECTTSCEEEEECCBCCCCCCTTCGGGCCTTCCCEEEEE
T ss_pred             EEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcce-EEEEECCCCCEEEEEEecccccccccccccCCCCCCceeeeE
Confidence            9999   7899999999999999877665 3344344 38899999999999976422               3458999


Q ss_pred             eeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHH--
Q 022835          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK--  235 (291)
Q Consensus       158 ~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~--  235 (291)
                      .|.|+|++++.+|| ++|||++.......++.....++..+..  ++.+.+...       .+++.+|++|.|+|+++  
T Consensus       157 ~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~--~~~~~~~~~-------~~~~~~Hiaf~v~d~d~v~  226 (323)
T 1f1u_A          157 NQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTGG-------NGPRMHHVAFATHEKHNII  226 (323)
T ss_dssp             EEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEES-------SBSEEEEEEEECSSHHHHH
T ss_pred             EEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCC--cccEEEeCC-------CCCCceEEEEECCCHHHHH
Confidence            99999999999999 9999999876554444334455554332  233444321       12388999999999888  


Q ss_pred             -HHHHHHHHHHHhCC--eeccCCccCCCCCceEEEEECCCCceEEEecchhh
Q 022835          236 -SAEVVNLVTQELGG--KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       236 -~~~~l~~~~~~~G~--~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                       +.++|    +++|+  ++..+|+++..++.+++||+|||||+||++.....
T Consensus       227 ~~~~~l----~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~  274 (323)
T 1f1u_A          227 QICDKM----GALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDYY  274 (323)
T ss_dssp             HHHHHH----HHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCC
T ss_pred             HHHHHH----HHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCCEE
Confidence             66667    99999  88888887765557889999999999999875433

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=100.00  E-value=1.7e-33  Score=239.72  Aligned_cols=244  Identities=16%  Similarity=0.153  Sum_probs=175.0

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEec-CCCCcceEEEeeecCCCccccCCCCceEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF-GPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~   97 (291)
                      +.+++|+||.|.|+|++++.+||+++|||++..+..  ..   ..++.. +... ...+.+...       ...+..|++
T Consensus         4 ~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~---~~~l~~~~~~~-~~~l~l~~~-------~~~~~~h~a   70 (309)
T 3hpy_A            4 TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QG---RVYFKCWDERD-HSCYIIREA-------DTAGIDFFG   70 (309)
T ss_dssp             CSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TS---CEEEECTTCCB-SCSEEEEEC-------SSCEEEEEE
T ss_pred             cccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CC---eEEEEeccCCC-ceEEEEEeC-------CCCceeEEE
Confidence            457899999999999999999999999999976632  11   244443 3222 122333322       123788999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCcc-CCCCceEEEEEECCCCCEEEEEEcCC----------------------CC
Q 022835           98 IATED---VYKLVENIRAKGGNVTREPGP-LKGGTTHIAFVKDPDGYIFELIQRGP----------------------TP  151 (291)
Q Consensus        98 ~~v~d---i~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~~dp~G~~iel~~~~~----------------------~~  151 (291)
                      |.|++   +++++++|+++|+++...+.. ..++.. .+||+||+||.|||++...                      .+
T Consensus        71 ~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~-~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  149 (309)
T 3hpy_A           71 FKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGE-RVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAP  149 (309)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCC-EEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGSSSCC
T ss_pred             EEECCHHHHHHHHHHHHhCCCceeeccCCccCCCee-EEEEECCCCCEEEEEEccceecccccccCCCCCccccCCCccc
Confidence            99986   999999999999998765443 233333 4899999999999997542                      13


Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCC-cceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      .+++|+.|.|+|++++.+||+++|||++........ +.....++..+..  ...+.+...      +.+.+.+|++|.|
T Consensus       150 ~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~Hiaf~v  221 (309)
T 3hpy_A          150 IQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHK--VHDIAFVEY------PEKGKLHHCSFLL  221 (309)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSS--SCSEEEEEC------SSTTEEEEEEEEC
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCC--ceeEEEecC------CCCCceeEEEEEC
Confidence            458999999999999999999999999887654332 2234455554332  223333221      1234689999999


Q ss_pred             cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhH
Q 022835          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~  285 (291)
                      +|+++..+.+ ++++++|+++..+|.+++.++.+++||+|||||+|||+......
T Consensus       222 ~d~~~v~~~~-~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g~~~  275 (309)
T 3hpy_A          222 ESWEQVLRAG-DIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGGYHP  275 (309)
T ss_dssp             SSHHHHHHHH-HHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEECCCC
T ss_pred             CCHHHHHHHH-HHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCCccc
Confidence            9866544333 44499999999888877665678899999999999999875443

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=100.00  E-value=9.8e-34  Score=243.98  Aligned_cols=239  Identities=14%  Similarity=0.144  Sum_probs=176.0

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      ..+++|+||.|.|+|++++.+||+++|||++..+..   .   ..++..........+.+...       ...++.|++|
T Consensus         7 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~---~~~l~~~~~~~~~~l~l~~~-------~~~g~~~~af   73 (339)
T 3lm4_A            7 FDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG---Q---SVYLRGYEDPYPWSLKITEA-------PEAGMGHAAM   73 (339)
T ss_dssp             GSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET---T---EEEEECTTCSSSCSEEEEEC-------SSCEEEEEEE
T ss_pred             CCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC---C---EEEEEecCCCCceEEEEeeC-------CCCCcceEEE
Confidence            468999999999999999999999999999987632   1   24444321212222333322       1346899999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC------------------------CC
Q 022835           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP------------------------TP  151 (291)
Q Consensus        99 ~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~------------------------~~  151 (291)
                      .|+|   +++++++|+++|+++...+. .+++.. .++|+||+|+.|||+....                        .+
T Consensus        74 ~v~~~~dld~~~~~l~~~G~~~~~~~~-~~~~~~-~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  151 (339)
T 3lm4_A           74 RTSSPEALERRAKSLTDGNVDGTWSED-QFGYGK-TFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPV  151 (339)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEECC-STTBCC-EEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSCCCSBSSCC
T ss_pred             EeCCHHHHHHHHHHHHHCCCceeeccC-CCCceE-EEEEECCCCCEEEEEEeeeEcCCCccccccccCcccccCCCCCCc
Confidence            9987   89999999999999876654 333333 4899999999999986521                        23


Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .+++|+.|.|+|++++.+||+++|||++..... .++.....++..+..  ...+.+.....    ....+.+|++|.|+
T Consensus       152 ~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~--~~~l~~~~~~~----~~~~~~~Hiaf~v~  224 (339)
T 3lm4_A          152 KRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLL--GHEVACMRDMT----GGHGKLHHLAFFYG  224 (339)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSS--SCSEEEEECTT----SCCSEEEEEEEECC
T ss_pred             ceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCC--ceEEEEeccCC----CCCCceeEEEEEeC
Confidence            569999999999999999999999999988765 333334555654432  33455543111    22347899999999


Q ss_pred             c---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          232 D---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      |   ++++.++|    +++|+++..+|+++..++.+++||+||+||+|||+...+
T Consensus       225 d~~~v~~~~~~l----~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~  275 (339)
T 3lm4_A          225 TGQHNIDAVEMF----RDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAG  275 (339)
T ss_dssp             CHHHHHHHHHHH----HHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCC
T ss_pred             CHHHHHHHHHHH----HHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCC
Confidence            9   55666666    999999998888766555688999999999999986554

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=5.8e-33  Score=236.38  Aligned_cols=235  Identities=22%  Similarity=0.320  Sum_probs=176.5

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      +.+++|.|+.|.|+|++++.+||+++|||++.....  .    ..++..++......+.+...       ...+..|++|
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~--~----~~~l~~~~~~~~~~l~l~~~-------~~~~~~~~~~   70 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA--N----NAWFKAQGADEHHVVQLRRA-------DENRIDVIAL   70 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS--S----EEEEECTTSCCSCSEEEEEC-------SSCEEEEEEE
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC--C----eEEEEECCCCCCEEEEEEEC-------CCCCeeEEEE
Confidence            568999999999999999999999999999876532  1    24555433101222333332       1346789999


Q ss_pred             Ee---CCHHHHHHHHHHcCCeeecCCcc--CCCCceEEEEEECCCCCEEEEEEcCC------------CCCCceeEeeee
Q 022835           99 AT---EDVYKLVENIRAKGGNVTREPGP--LKGGTTHIAFVKDPDGYIFELIQRGP------------TPEPLCQVMLRV  161 (291)
Q Consensus        99 ~v---~di~~~~~~l~~~G~~~~~~~~~--~~~g~~~~~~~~dp~G~~iel~~~~~------------~~~~~~hv~l~v  161 (291)
                      .|   +|+++++++|+++|+++...+..  .+++... ++|+||+|+.+||++...            .+.++.|+.|.|
T Consensus        71 ~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~-~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~l~hv~l~v  149 (310)
T 3b59_A           71 AADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYG-FRFFSPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHS  149 (310)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEE-EEEECTTSCEEEEEECCCCCCCCCCCTTCCCCCEEEEEEEEE
T ss_pred             EeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceE-EEEECCCCCEEEEEEcccccCCCccCCCCCcCcEeceEEEec
Confidence            98   78999999999999998877665  4444444 789999999999998753            134689999999


Q ss_pred             CCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHHH---HH
Q 022835          162 GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKS---AE  238 (291)
Q Consensus       162 ~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~~---~~  238 (291)
                      +|++++.+||+++|||++..+..  +   ...++..+..  +..+.+...      +  .+.+|++|.|+|+++.   .+
T Consensus       150 ~D~~~a~~FY~~~LG~~~~~~~~--~---~~~fl~~~~~--~~~l~l~~~------~--~g~~hi~f~v~d~d~~~~~~~  214 (310)
T 3b59_A          150 PNHQDMVKFFTDVLGFKVSDWLG--D---FMCFLRCNSA--HHRIAILPG------P--PCLNHVAYDMLSVDDMMRGAH  214 (310)
T ss_dssp             TTHHHHHHHHHHTSCCEEEEEET--T---TEEEEESSSB--SCSEEEEES------S--SEEEEEEEECSSHHHHHHHHH
T ss_pred             CCHHHHHHHHHhCCCCEEEEeeC--C---eEEEEecCCC--cceEEEECC------C--CceEEEEEEcCCHHHHHHHHH
Confidence            99999999999999999887542  1   2234443322  333444321      1  4789999999997776   55


Q ss_pred             HHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhHH
Q 022835          239 VVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       239 ~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~~  286 (291)
                      +|    +++|+++..+|++++.+..+++||+|||||+||+++..+..+
T Consensus       215 ~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~d  258 (310)
T 3b59_A          215 RL----KVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELEEVD  258 (310)
T ss_dssp             HH----HHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCCBCC
T ss_pred             HH----HHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCccEec
Confidence            55    999999998888876555689999999999999999876554

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=100.00  E-value=1.3e-32  Score=234.07  Aligned_cols=241  Identities=18%  Similarity=0.255  Sum_probs=170.4

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      .++++++||.|.|+|++++.+||+++|||++..+...  +   ..++..+.....+.+.+...       ...+..|++|
T Consensus         3 ~~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~--~---~~~l~~~~~~~~~~l~~~~~-------~~~~~~~~~f   70 (307)
T 1mpy_A            3 KGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ--G---RVYLKAWTEVDKFSLVLREA-------DEPGMDFMGF   70 (307)
T ss_dssp             TSEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT--S---CEEEECTTCCBSCSEEEEEC-------SSCEEEEEEE
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC--C---cEEEEecCCCCceEEEEccC-------CCCCcceEEE
Confidence            3589999999999999999999999999999765331  1   14555433222222222221       1236789999


Q ss_pred             Ee---CCHHHHHHHHHHcCCeeecCCc-cCCCCceEEEEEECCCCCEEEEEEcCC----------------------CCC
Q 022835           99 AT---EDVYKLVENIRAKGGNVTREPG-PLKGGTTHIAFVKDPDGYIFELIQRGP----------------------TPE  152 (291)
Q Consensus        99 ~v---~di~~~~~~l~~~G~~~~~~~~-~~~~g~~~~~~~~dp~G~~iel~~~~~----------------------~~~  152 (291)
                      .|   +|+++++++|+++|+++...+. ..+++.. .++|+||+|+.+||++...                      .+.
T Consensus        71 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (307)
T 1mpy_A           71 KVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGR-RVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAV  149 (307)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCC-EEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCCCTTCCC
T ss_pred             EeCCHHHHHHHHHHHHHcCCceecCCcccCCCceE-EEEEECCCCCEEEEEEcchhcccccccccCCcCCcccCCCCCcC
Confidence            99   8999999999999999877654 3333333 3889999999999998531                      123


Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecc
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d  232 (291)
                      ++.|+.|.|+|++++.+||+++|||++.......++.....++.....  +..+.+...      +...+.+|++|.|+|
T Consensus       150 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~------~~~g~~~hi~f~v~d  221 (307)
T 1mpy_A          150 RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--AHDVAFIHH------PEKGRLHHVSFHLET  221 (307)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB--SCSEEEEEC------SSSSEEEEEEEECSC
T ss_pred             ceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCC--ceeEEEecC------CCCCcceEEEEEcCC
Confidence            589999999999999999999999998866432222112223343222  223333221      111237999999995


Q ss_pred             ---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhh
Q 022835          233 ---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       233 ---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                         ++++++++    +++|+++..+|..++.+.++++||+|||||+|||++....
T Consensus       222 ~~dv~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  272 (307)
T 1mpy_A          222 WEDLLRAADLI----SMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDY  272 (307)
T ss_dssp             HHHHHHHHHHH----HHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCB
T ss_pred             HHHHHHHHHHH----HHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEecccc
Confidence               45555666    9999999888777654346789999999999999987543

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=100.00  E-value=8.2e-32  Score=232.07  Aligned_cols=247  Identities=12%  Similarity=0.075  Sum_probs=168.5

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCC-CceEEEEEecCCCCcceEEEeeecCCCcc-ccCCCCceEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-EKYSNAFLGFGPEQSHFVVELTYNYGVTS-YDIGTGFGHFA   97 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~i~   97 (291)
                      ++++|.||.|.|+|++++.+||+++|||++.......+ ......++..+.+.....+.+........ .....+..|++
T Consensus        27 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hia  106 (338)
T 1zsw_A           27 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIG  106 (338)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEE
Confidence            58999999999999999999999999999876542111 11122223222112234454443322211 11234678999


Q ss_pred             EEeC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC------------------CCCcee
Q 022835           98 IATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT------------------PEPLCQ  156 (291)
Q Consensus        98 ~~v~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~------------------~~~~~h  156 (291)
                      |.|+   |+++++++|+++|+.+..++.  .+|. ..++|+||||+.|||++....                  +.++.|
T Consensus       107 f~v~~~~dld~~~~~l~~~G~~~~~~~~--~~G~-~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~~~~~~~~~~~~l~h  183 (338)
T 1zsw_A          107 LLVPSEDSLHYWKERFEKFDVKHSEMTT--YANR-PALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGS  183 (338)
T ss_dssp             EEESCHHHHHHHHHHHHHTTCEECCSEE--ETTE-EEEEEECTTCCEEEEEECTTCCCTTCCCCTTCSSCGGGSCCEEEE
T ss_pred             EEcCCHHHHHHHHHHHHHCCCccccccc--cCCc-EEEEEECCCCCEEEEEEcCCccccccCcCcCCCCCccccCceEEE
Confidence            9998   799999999999999876544  2454 458999999999999987631                  235899


Q ss_pred             EeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec---ch
Q 022835          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD---DV  233 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~---d~  233 (291)
                      +.|.|+|++++.+||+++|||++.....    .+..+....++. ....+.+... .........+.+|++|.|+   |+
T Consensus       184 v~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~g~-~~~~~~~~~~-~~~~~~~~~~~~hiaf~v~~~~dv  257 (338)
T 1zsw_A          184 VELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKGEA-FGEIVVKYLD-GPTEKPGRGSIHHLAIRVKNDAEL  257 (338)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTTCS-TTCEEEEECC-SSBCBCCBTCEEEEEEEESSHHHH
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEeecC----CeEEEEecCCCC-ceEEEEeccC-CCCCCCCCCceEEEEEEeCCHHHH
Confidence            9999999999999999999999876542    122222210111 0122333221 1111112246799999999   57


Q ss_pred             HHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      +++.++|    +++|+++. +|....  +.+.+||+|||||+|||++..
T Consensus       258 ~~~~~~l----~~~G~~~~-~~~~~~--~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          258 AYWEEQV----KQRGFHSS-GIIDRF--YFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             HHHHHHH----HHTTCCCC-CCEECS--SEEEEEEECTTCCEEEEEEEE
T ss_pred             HHHHHHH----HHCCCcee-eeeecC--ceEEEEEECCCCCEEEEEEcC
Confidence            7777777    99999985 554443  368899999999999999865

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=100.00  E-value=2.6e-32  Score=230.60  Aligned_cols=238  Identities=13%  Similarity=0.116  Sum_probs=170.0

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEe
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v  100 (291)
                      +++|+||.|.|+|++++.+||+++|||++..+..  .    ..++..++....+  .+...       ...+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~----~~~l~~~~~~~~l--~~~~~-------~~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG--D----AALYRADQRAWRI--AVQPG-------ELDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSBSCSE--EEEEC-------TTCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC--C----eEEEEcCCceEEE--EEccC-------CCCCccEEEEEE
Confidence            7899999999999999999999999999976532  1    2445544332222  22221       123678999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCcc---CCCCceEEEEEECCCCCEEEEEEcCCC------------------CCCcee
Q 022835          101 E---DVYKLVENIRAKGGNVTREPGP---LKGGTTHIAFVKDPDGYIFELIQRGPT------------------PEPLCQ  156 (291)
Q Consensus       101 ~---di~~~~~~l~~~G~~~~~~~~~---~~~g~~~~~~~~dp~G~~iel~~~~~~------------------~~~~~h  156 (291)
                      +   |+++++++|+++|+++...+..   .+++.. .++|+||+||.+||++....                  +.++.|
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h  145 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMG-LLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGH  145 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSE-EEEEECTTSCEEEEEECCCBCTTSCCCCSSSCCCBCCGGGCSCE
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCceE-EEEEECCCCCEEEEEECccccccCCCCCCCCccccccCCcccce
Confidence            8   8999999999999998766543   123333 48899999999999986521                  135899


Q ss_pred             EeeeeCCchhcHHHHHHhhCCeeeeeecCC--Cc-ceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecch
Q 022835          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKP--EY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~  233 (291)
                      +.|.|+|++++.+||+++|||++.......  ++ .....++..+..  ...+.+...      +...+.+|++|.|+|+
T Consensus       146 v~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~d~  217 (292)
T 1kw3_B          146 FVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAAF------PIPKRIHHFMLQANTI  217 (292)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECC------SCSSSEEEEEEEBSSH
T ss_pred             EEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCC--cceEEEecC------CCCCceEEEEEEcCCH
Confidence            999999999999999999999987653211  11 123334443321  223444321      1135789999999997


Q ss_pred             HHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCc-eEEEecchhh
Q 022835          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGW-KTVLVDNEDF  284 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~-~ie~~~~~~~  284 (291)
                      ++..+.+ .+++ +|+++..+|++++.+..+++||+||||| +|||+.....
T Consensus       218 ~~v~~~~-~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~~~  267 (292)
T 1kw3_B          218 DDVGYAF-DRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGPRT  267 (292)
T ss_dssp             HHHHHHH-HHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECCCB
T ss_pred             HHHHHHH-HHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECCEE
Confidence            6644433 3338 9999998888776544678899999999 9999987643

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.2e-32  Score=227.83  Aligned_cols=242  Identities=19%  Similarity=0.190  Sum_probs=169.9

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCC-ceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      ...+.|+.|.|+|++++++||+++|||++......... .+.  ++..+. .  ....+.......+ .......+++|.
T Consensus        30 ~g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~--~~~~~g-~--~~~~l~~~~~~~~-~~~~~~~~~~~~  103 (282)
T 3oxh_A           30 QGTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYS--MATLNG-E--AVAAIAPMPPGAP-EGMPPIWNTYIA  103 (282)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEE--EEEETT-E--EEEEEEECCSCC----CCCEEEEEEE
T ss_pred             CCCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEE--EEEeCC-e--eeEeeccCCCCCC-CCCCCcEEEEEE
Confidence            45899999999999999999999999998765331110 232  222221 1  1122222111111 122345789999


Q ss_pred             eCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC--------CCCceeEeeeeCCchhcHHHH
Q 022835          100 TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT--------PEPLCQVMLRVGDLGRSIKFY  171 (291)
Q Consensus       100 v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~--------~~~~~hv~l~v~d~~~~~~fy  171 (291)
                      |+|+++++++|+++|+++..++...++.. .+++|+||+||.|+|++....        ++.+.|+.|.|+|++++++||
T Consensus       104 v~d~d~~~~~l~~~G~~~~~~p~~~~~~g-~~~~~~DP~G~~i~l~~~~~~~~~~~~~~~~~~~~~~l~v~D~~~a~~FY  182 (282)
T 3oxh_A          104 VDDVDAVVDKVVPGGGQVMMPAFDIGDAG-RMSFITDPTGAAVGLWQANRHIGATLVNETGTLIWNELLTDKPDLALAFY  182 (282)
T ss_dssp             CSCHHHHHTTTTTTTCEEEEEEEEETTTE-EEEEEECTTCCEEEEEEESSCCSCSBCSSTTSEEEEEEECSCHHHHHHHH
T ss_pred             eCCHHHHHHHHHHCCCEEEECCEecCCCe-EEEEEECCCCCEEEEEEccccCCccccCCCCccEEEEEEcCCHHHHHHHH
Confidence            99999999999999999988777665433 448999999999999998742        467999999999999999999


Q ss_pred             HHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHHHHHHHHHHHHHhCCee
Q 022835          172 EKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI  251 (291)
Q Consensus       172 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~  251 (291)
                      +++|||++.......+..+..+...  +   .....+.. ..   ....++.+|++|.|+|++++++++    +++|+++
T Consensus       183 ~~vlG~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~-~~---~~~~~~~~~~~~~v~dvd~~~~~~----~~~G~~~  249 (282)
T 3oxh_A          183 EAVVGLTHSSMEIAAGQNYRVLKAG--D---AEVGGCME-PP---MPGVPNHWHVYFAVDDADATAAKA----AAAGGQV  249 (282)
T ss_dssp             HHHHCCEEEEC-------CEEEEET--T---EEEEEEEC-CS---STTCCSEEEEEEECSCHHHHHHHH----HHTTCEE
T ss_pred             HHHhCCeeeeccCCCCcceEEEEcC--C---ccEeeecC-CC---CCCCCCeEEEEEEeCCHHHHHHHH----HHcCCEE
Confidence            9999999876431222233333222  2   11112211 11   112336689999999999999999    9999999


Q ss_pred             ccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          252 TRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       252 ~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      ..+|...++ +++++||+|||||+|||++..+
T Consensus       250 ~~~p~~~~~-~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          250 IAEPADIPS-VGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             EEEEEEETT-TEEEEEEECTTSCEEEEEEEC-
T ss_pred             ecCCeEcCC-CeEEEEEECCCCCEEEEEecCC
Confidence            988887765 4689999999999999998754

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=100.00  E-value=3.6e-32  Score=230.55  Aligned_cols=237  Identities=11%  Similarity=0.119  Sum_probs=169.8

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEE-EeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLR-KRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~   97 (291)
                      |++++|+||.|.|+|++++.+||+++|||++.. +.   .+   ..++..++....  +.+...       ...+..|++
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~---~~~~~~~~~~~~--l~l~~~-------~~~~~~~~~   65 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EG---ALYLRMDDFPAR--LVVVPG-------EHDRLLEAG   65 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCC---SS---CEEEESSSSSCS--EEEEEC-------SSCEEEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCC---CC---eEEEEeCCCcEE--EEEecC-------CCCCcceEE
Confidence            357899999999999999999999999999865 32   11   244555433222  333332       134678999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCccC---CCCceEEEEEECCCCCEEEEEEc-CCC---------------CCCce
Q 022835           98 IATED---VYKLVENIRAKGGNVTREPGPL---KGGTTHIAFVKDPDGYIFELIQR-GPT---------------PEPLC  155 (291)
Q Consensus        98 ~~v~d---i~~~~~~l~~~G~~~~~~~~~~---~~g~~~~~~~~dp~G~~iel~~~-~~~---------------~~~~~  155 (291)
                      |.|++   +++++++|+++|+++...+...   +++.. .++|+||+||.+||++. ...               +.++.
T Consensus        66 ~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~l~  144 (300)
T 2zyq_A           66 WECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDE-MIRFADPSGNCLEVFHGTALEHRRVVSPYGHRFVTGEQGMG  144 (300)
T ss_dssp             EECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSE-EEEEECTTCCEEEEEECCCCCCSCCCCTTCCCBCCGGGCSC
T ss_pred             EEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceE-EEEEECCCCCEEEEEEcCCcCCCCCccCCCcccccCCCccC
Confidence            99965   8899999999999987655432   23333 48899999999999997 211               24689


Q ss_pred             eEeeeeCCchhcHHHHHHhhCCeeeeeecCC--------Cc-ceeEEEecccccccceeEeeccccCccccccCcceeeE
Q 022835          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--------EY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV  226 (291)
Q Consensus       156 hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~  226 (291)
                      |+.|.|+|++++.+||+++|||++.......        ++ .....++..+..  ...+.+...      +...+.+|+
T Consensus       145 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~g~~h~  216 (300)
T 2zyq_A          145 HVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPR--HHSLAFLPM------PTSSGIVHL  216 (300)
T ss_dssp             EEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSB--SCSEEEESS------CCSSSEEEE
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCC--ccEEEEecC------CCCCCceEE
Confidence            9999999999999999999999987543221        11 123344443221  233444321      123578999


Q ss_pred             EEEecchHHH---HHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          227 AISTDDVYKS---AEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       227 ~f~v~d~~~~---~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      +|.|+|+++.   +++|    +++|+++..+|.+++.+..+++||+|||||+|||+....
T Consensus       217 af~v~d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~~  272 (300)
T 2zyq_A          217 MVEVEQADDVGLCLDRA----LRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEGR  272 (300)
T ss_dssp             EEEBSSHHHHHHHHHHH----HHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECCC
T ss_pred             EEEeCCHHHHHHHHHHH----HHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCCe
Confidence            9999996554   5666    999999988887766544688999999999999998654

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=100.00  E-value=8e-32  Score=228.12  Aligned_cols=238  Identities=14%  Similarity=0.145  Sum_probs=173.1

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEe
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v  100 (291)
                      +++|+||.|.|+|++++.+||+++|||++..+..  .    ..++..+.....+  .+.+.       ...+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~----~~~~~~~~~~~~l--~~~~~-------~~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD--N----GDLFRIDSRAWRI--AVQQG-------EVDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSBSCSE--EEEEC-------TTCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC--C----eEEEEeCCCcEEE--EEecC-------CCCCccEEEEEe
Confidence            6899999999999999999999999999987542  1    2455544332223  23222       134678999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCcc---CCCCceEEEEEECCCCCEEEEEEcCCC------------------CCCcee
Q 022835          101 E---DVYKLVENIRAKGGNVTREPGP---LKGGTTHIAFVKDPDGYIFELIQRGPT------------------PEPLCQ  156 (291)
Q Consensus       101 ~---di~~~~~~l~~~G~~~~~~~~~---~~~g~~~~~~~~dp~G~~iel~~~~~~------------------~~~~~h  156 (291)
                      +   |+++++++|+++|+++...+..   ..++.. .++|+||+|+.+||++....                  +.++.|
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h  145 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTG-LITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGH  145 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSE-EEEEECTTSCEEEEEECCCBCTTSCCCCSSSCSCBCCGGGCSCE
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCcee-EEEEECCCCCEEEEEECccccccCCccCCCcccccccCccccce
Confidence            8   9999999999999998765542   123333 48999999999999986521                  246999


Q ss_pred             EeeeeCCchhcHHHHHHhhCCeeeeeecCC---CcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecch
Q 022835          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKP---EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~  233 (291)
                      +.|.|+|++++.+||+++|||++.......   +......++..+.  .+..+.+...      +...+.+|++|.|+|+
T Consensus       146 v~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~l~~~------~~~~~~~hiaf~v~d~  217 (297)
T 1lgt_A          146 FVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNE--RHHTLAIAAF------PLPKRIHHFMLEVASL  217 (297)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSS--BSCSEEEECC------CCSSSEEEEEEEBSCH
T ss_pred             EEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCC--CcceEEEEcC------CCCCCceEEEEeCCCH
Confidence            999999999999999999999987653211   1112334444322  1233444321      1235789999999997


Q ss_pred             HHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhh
Q 022835          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                      +++.+.. .+ +++|+++..+|.+++.+..+++||+|||||+|||++....
T Consensus       218 ~~~~~~~-~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~~~  266 (297)
T 1lgt_A          218 DDVGFAF-DR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSART  266 (297)
T ss_dssp             HHHHHHH-HH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECCCB
T ss_pred             HHHHHHH-HH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCCEE
Confidence            7776665 56 8899999988887765445779999999999999987643

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=100.00  E-value=2.9e-32  Score=231.65  Aligned_cols=240  Identities=13%  Similarity=0.148  Sum_probs=169.5

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      |.+++|+||.|.|+|++++.+||+++|||++....  .++   ..++..++....  +.+....       ..+..|++|
T Consensus         2 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~~~---~~~~~~~~~~~~--l~l~~~~-------~~~~~~~~f   67 (305)
T 2wl9_A            2 AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDG--EDD---RIYLRMDRWHHR--IVLHADG-------SDDLAYIGW   67 (305)
T ss_dssp             CCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCS--CTT---EEEEECSSBSCS--EEEECSS-------CCEEEEEEE
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHhccCCEEeecc--CCC---eEEEEeCCCeEE--EEEEECC-------CCCeEEEEE
Confidence            34789999999999999999999999999987511  122   245555443223  3333221       346789999


Q ss_pred             EeC---CHHHHHHHHHHcCCeeecCCccC--CCCceEEEEEECCCCCEEEEEEc-CC------------------CCCCc
Q 022835           99 ATE---DVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQR-GP------------------TPEPL  154 (291)
Q Consensus        99 ~v~---di~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dp~G~~iel~~~-~~------------------~~~~~  154 (291)
                      .|+   |+++++++|+++|+++...+...  ..+....++|+||+||.+||++. ..                  .+.++
T Consensus        68 ~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  147 (305)
T 2wl9_A           68 RVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGL  147 (305)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEEECBCTTSCCCCSSCCSSCBCCTTTCS
T ss_pred             EECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEECCCccCCCCcCCCCCcccceecCCcee
Confidence            996   69999999999999987665432  12334458899999999999976 21                  12379


Q ss_pred             eeEeeeeCCchhcHHHHHHhhCCeeeeeecCC--Cc-ceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--EY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       155 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .|+.|.|+|++++.+|| ++|||++.......  ++ .....++..+..  ...+.+...      ....+.+|++|.|+
T Consensus       148 ~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~  218 (305)
T 2wl9_A          148 GHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDR--HHSLAFGVG------PMDKRINHLMIEYT  218 (305)
T ss_dssp             CEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSS--SCSEEECCS------CCSSSEEEEEEEES
T ss_pred             eeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCC--ceEEEEecC------CCCCCceEEEEEcC
Confidence            99999999999999999 99999986542211  11 122334443222  223333221      12357899999999


Q ss_pred             chH---HHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhH
Q 022835          232 DVY---KSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       232 d~~---~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~  285 (291)
                      |++   ++++++    +++|+++..+|++++.+..+++||+|||||+|||+......
T Consensus       219 d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~~~  271 (305)
T 2wl9_A          219 HLDDLGYAHDLV----RQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGSRPA  271 (305)
T ss_dssp             SHHHHHHHHHHH----HHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECCCCC
T ss_pred             CHHHHHHHHHHH----HHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCCEEe
Confidence            944   444555    99999998888777654467899999999999999876443

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=100.00  E-value=8.3e-32  Score=228.53  Aligned_cols=241  Identities=13%  Similarity=0.077  Sum_probs=168.1

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      +.+++|+||.|.|+|++++.+||+++|||++..+..  ..   ..++..+.....+  .+...       ...+..|++|
T Consensus         5 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~---~~~~~~~~~~~~l--~l~~~-------~~~~~~~~~~   70 (302)
T 2ehz_A            5 AAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--KD---RFYLRMDYWHHRI--VVHHN-------GQDDLEYLGW   70 (302)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--SS---EEEEESSSBSCSE--EEESS-------CCSEEEEEEE
T ss_pred             ccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--Cc---ceEEEeCCCceEE--EEecC-------CCCCeeEEEE
Confidence            568999999999999999999999999999875421  11   2445443322223  33221       1236789999


Q ss_pred             EeC---CHHHHHHHHHHcCCeeecCCccCC--CCceEEEEEECCCCCEEEEEEcCC----C---------------CCCc
Q 022835           99 ATE---DVYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIFELIQRGP----T---------------PEPL  154 (291)
Q Consensus        99 ~v~---di~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~dp~G~~iel~~~~~----~---------------~~~~  154 (291)
                      .|.   |+++++++|+++|+++...+...+  .+....++|+||+||.+||++...    .               +.++
T Consensus        71 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  150 (302)
T 2ehz_A           71 RVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQGL  150 (302)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEECBCTTSCCCCSSCCSSCBCCGGGCS
T ss_pred             EECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECCCccCCCCccCCCCcccceecCCCcc
Confidence            994   699999999999999876654332  123345899999999999997531    1               1278


Q ss_pred             eeEeeeeCCchhcHHHHHHhhCCeeeeeecCC--Cc-ceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--EY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       155 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .|+.|.|+|++++.+|| ++|||++......+  ++ .....++..+..  ...+.+...      +...+.+|++|.|+
T Consensus       151 ~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~  221 (302)
T 2ehz_A          151 GHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNAR--DHSIAFGAM------PAAKRLNHLMLEYT  221 (302)
T ss_dssp             CEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSB--SCSEEECSC------CCSSSEEEEEEEES
T ss_pred             ceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCC--CcEEEEecC------CCCCceeEEEEEcC
Confidence            99999999999999999 99999987543211  21 123344443321  223333221      11347899999999


Q ss_pred             chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      |+++..+.+ .+++++|+++..+|.+++.++.+++||+|||||+|||+....
T Consensus       222 d~~~v~~~~-~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~~  272 (302)
T 2ehz_A          222 HMEDLGYTH-QQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRGA  272 (302)
T ss_dssp             SHHHHHHHH-HHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECCC
T ss_pred             CHHHHHHHH-HHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECce
Confidence            976544322 333999999988887766545678999999999999987643

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.97  E-value=3.5e-29  Score=217.16  Aligned_cols=252  Identities=18%  Similarity=0.225  Sum_probs=177.0

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeec--CCCcc----ccCCCC
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN--YGVTS----YDIGTG   92 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~--~~~~~----~~~~~~   92 (291)
                      +.+++++||.|.|+|++++.+||++.|||+++.+...+.+  ..+.+..|  ...  +.+..+  +....    ..++.+
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g--~~~--l~l~~~~~~~~~~~~~~~~~g~g   74 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQG--QVT--LVLTEPTSDRHPAAAYLQTHGDG   74 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEET--TEE--EEEEEESSTTSHHHHHHHHHSSE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeC--CEE--EEEeCCCCCCCHHHHHHHhcCCe
Confidence            3589999999999999999999999999999876543332  23334433  333  333332  11100    124678


Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC-----------------------
Q 022835           93 FGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP-----------------------  149 (291)
Q Consensus        93 ~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~-----------------------  149 (291)
                      +.|++|.|+|+++++++++++|+++...|.....|......+++|+|..++|+++..                       
T Consensus        75 ~~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~~~~~f~p~~~~~~~~~~~~~~~~  154 (357)
T 2r5v_A           75 VADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDGTSAELPPGFTGSMDVTNHGKGDV  154 (357)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCSSSCCCCTTCEECSCCCCTTCTTC
T ss_pred             EEEEEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecccCCCCCCCCCcccCcccccCCCCC
Confidence            999999999999999999999999887665433344344788999999999998631                       


Q ss_pred             CCCCceeEeeeeC--CchhcHHHHHHhhCCeeeeeec--CCCcceeEEEecccccccceeEeeccccCc--cc-------
Q 022835          150 TPEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVD--KPEYKYTLAMLGYAEEDQTTVLELTYNYGV--TE-------  216 (291)
Q Consensus       150 ~~~~~~hv~l~v~--d~~~~~~fy~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~-------  216 (291)
                      ...+++|+.+.|+  |++++.+||+++|||++.....  ....+....++..+.  ....+++......  ..       
T Consensus       155 ~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~--g~~~l~l~~~~~~~~~~~~~~~~~  232 (357)
T 2r5v_A          155 DLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSAS--GAVTLTLIEPDRNADPGQIDEFLK  232 (357)
T ss_dssp             CCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTT--SCCEEEEEEECTTSBCCHHHHHHH
T ss_pred             CcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCC--CCEEEEEeeecCCCCCchhHHHHH
Confidence            0134899999999  9999999999999999885432  122222334444322  2345666543211  01       


Q ss_pred             cccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCC---C-----C--------CceEEEEECCCCceEEEec
Q 022835          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIP---G-----L--------NTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       217 ~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~---~-----~--------~~~~~~~~DPdG~~ie~~~  280 (291)
                      ...+.+++|++|.|+|+++++++|    +++|++++..|....   +     .        ...++|++||||++|||++
T Consensus       233 ~~~~~g~~Hiaf~v~Di~~~~~~L----~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t  308 (357)
T 2r5v_A          233 DHQGAGVQHIAFNSNDAVRAVKAL----SERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFT  308 (357)
T ss_dssp             HHTSSEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEB
T ss_pred             hcCCCCccEEEEEcCCHHHHHHHH----HHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEc
Confidence            113568999999999999999999    999999888763210   0     0        0137999999999999998


Q ss_pred             ch
Q 022835          281 NE  282 (291)
Q Consensus       281 ~~  282 (291)
                      .+
T Consensus       309 ~~  310 (357)
T 2r5v_A          309 AS  310 (357)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.97  E-value=7.7e-28  Score=209.97  Aligned_cols=255  Identities=17%  Similarity=0.233  Sum_probs=178.6

Q ss_pred             CCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCC--ceEEEEEecCCCCcceEEEeeec--CCCc------cc
Q 022835           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYN--YGVT------SY   87 (291)
Q Consensus        18 ~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~l~~~~~--~~~~------~~   87 (291)
                      .+.+++|+||.|.|+|++++.+||+++|||+++.+...+..  ....+.+..+  .  ..+.+..+  +...      .+
T Consensus        17 ~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g--~--~~l~l~~~~~~~~~~~~~~~~~   92 (381)
T 1t47_A           17 PFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG--S--ARFVLTSVIKPATPWGHFLADH   92 (381)
T ss_dssp             CSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET--T--EEEEEEEESSCCSHHHHHHHHH
T ss_pred             CCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC--C--EEEEEecCCCCCCcchhHHHHH
Confidence            36789999999999999999999999999999876432211  2344445433  2  33444432  1111      11


Q ss_pred             --cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCC--CCceEEEEEECCCCCEEEEEEcC-------C------C
Q 022835           88 --DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIFELIQRG-------P------T  150 (291)
Q Consensus        88 --~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~dp~G~~iel~~~~-------~------~  150 (291)
                        .++.++.|+||.|+|+++++++|+++|+++..+|....  .|....+.+++|+|+.++|++..       +      .
T Consensus        93 ~~~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~~~~~f~p~~~~~~~  172 (381)
T 1t47_A           93 VAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGPYLPGYVAAAP  172 (381)
T ss_dssp             HHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSSSSTTCEECCC
T ss_pred             HHhcCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCCCCCCCCCCCccccc
Confidence              23678999999999999999999999999887765422  22334577899999999999852       0      0


Q ss_pred             ---------CCCceeEeeeeC--CchhcHHHHHHhhCCeeeeeec-----CCCcceeEEEecccccccceeEeecccc--
Q 022835          151 ---------PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVD-----KPEYKYTLAMLGYAEEDQTTVLELTYNY--  212 (291)
Q Consensus       151 ---------~~~~~hv~l~v~--d~~~~~~fy~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~l~~~~--  212 (291)
                               ..+++|+++.|+  |++++.+||+++|||++.....     .........++..+.  ....+++....  
T Consensus       173 ~~~~~~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~--g~v~i~l~~~~~~  250 (381)
T 1t47_A          173 IVEPPAHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT--LKVKFPINEPALA  250 (381)
T ss_dssp             SSCCCSSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT--SCSEEEEEEECCS
T ss_pred             cccCCCCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCC--CcEEEEEecCCcC
Confidence                     134899999999  9999999999999999876632     122223333443222  23456665432  


Q ss_pred             Cccc-------cccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCC--------C--------CceEEEEE
Q 022835          213 GVTE-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPG--------L--------NTKITSFV  269 (291)
Q Consensus       213 ~~~~-------~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~--------~--------~~~~~~~~  269 (291)
                      ...+       ...+.|++|++|.|+|+.+++++|    +++|++++..|...-.        .        ...++|-+
T Consensus       251 ~~~s~~~~~l~~~~g~Gv~HiAf~vdDi~~~~~~L----~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~  326 (381)
T 1t47_A          251 KKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTM----RAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADR  326 (381)
T ss_dssp             SSCCHHHHHHHHHTSCEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEE
T ss_pred             CCccHHHHHHHHhCCCCcceEEEecCCHHHHHHHH----HHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEee
Confidence            1111       124678999999999999999999    9999999887653210        0        01257779


Q ss_pred             CCCCceEEEecch
Q 022835          270 DPDGWKTVLVDNE  282 (291)
Q Consensus       270 DPdG~~ie~~~~~  282 (291)
                      ||+|.+++|++.+
T Consensus       327 d~~g~llqift~~  339 (381)
T 1t47_A          327 DEDGYLLQIFTKP  339 (381)
T ss_dssp             CSSCEEEEEEBCC
T ss_pred             CCCCeEEEEeccC
Confidence            9999999988754

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.95  E-value=2.8e-26  Score=201.74  Aligned_cols=232  Identities=17%  Similarity=0.240  Sum_probs=157.6

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccC--CCceEEEEEecCCCCcceEEEeeecCCC------------
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--EEKYSNAFLGFGPEQSHFVVELTYNYGV------------   84 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~l~~~~~~~~------------   84 (291)
                      +.+++|+||.|.|+|++++.+||++.|||+++.+...+  ...+..++++.  +...+.+.....+..            
T Consensus        21 ~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~--g~~~l~L~~~~~~~~~~~~~~~~~~~p   98 (424)
T 1sqd_A           21 FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTS--GDLRFLFTAPYSPSLSAGEIKPTTTAS   98 (424)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEE--TTEEEEEEEECCGGGTTTCCGGGCCCS
T ss_pred             ccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcC--CCEEEEEecCCCCcccccccccccccc
Confidence            55889999999999999999999999999998775433  22344455543  233333322211110            


Q ss_pred             -c----c------ccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC---
Q 022835           85 -T----S------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT---  150 (291)
Q Consensus        85 -~----~------~~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~---  150 (291)
                       .    .      ..++.|+.|+||.|+|+++++++++++|+++..+|....++ .....+++|+|+.++|+++...   
T Consensus        99 ~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~-~~~~~i~~~Gg~~~~lvd~~g~~~~  177 (424)
T 1sqd_A           99 IPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEA-VTIAEVKLYGDVVLRYVSYKAEDTE  177 (424)
T ss_dssp             STTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTT-EEEEEEEEETTEEEEEEEECCC---
T ss_pred             cccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCc-eEEEEEEcCCCcEEEEEecCCCCCC
Confidence             0    0      12457899999999999999999999999988777554332 2335566777777777654211   


Q ss_pred             ----------------------CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCc-----ceeEEEecccccccc
Q 022835          151 ----------------------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-----KYTLAMLGYAEEDQT  203 (291)
Q Consensus       151 ----------------------~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  203 (291)
                                            ..+++|+++.|+|++++.+||+++|||++..+....+.     +....++..+.  ..
T Consensus       178 ~~~f~p~~~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~--g~  255 (424)
T 1sqd_A          178 KSEFLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASND--EM  255 (424)
T ss_dssp             ---CCTTCEECCTTTCCCCCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTT--SC
T ss_pred             ccccCCCcccccccccCCCcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCC--Cc
Confidence                                  12489999999999999999999999999877643221     22333444222  24


Q ss_pred             eeEeecccc---Cccc----c---ccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCC
Q 022835          204 TVLELTYNY---GVTE----Y---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       204 ~~l~l~~~~---~~~~----~---~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                      ..+.+..+.   ...+    +   ..++|++|+||.|+|+.+++++|++++..+|++++..|
T Consensus       256 ~~l~l~e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          256 VLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             SEEEEEEECCC---CCHHHHHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             EEEEEecccccCCCcchhhhhhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence            556665542   1111    1   35679999999999999999999322222899999876

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.94  E-value=6.6e-26  Score=196.23  Aligned_cols=228  Identities=17%  Similarity=0.248  Sum_probs=165.2

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCc--eEEEEEecCCCCcceEEEeeec--CCC---ccc--cC
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK--YSNAFLGFGPEQSHFVVELTYN--YGV---TSY--DI   89 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~l~~~~~--~~~---~~~--~~   89 (291)
                      ..+++|+||+|.|+|++++.+||++.|||+.+.....+.+.  ...+.+..|  ...  +.+..+  +..   ..+  .+
T Consensus         7 ~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G--~i~--~~L~~p~~p~s~~~a~fl~~h   82 (393)
T 3isq_A            7 GRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG--KIV--FVLSSALNPWNKEMGDHLVKH   82 (393)
T ss_dssp             CEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET--TEE--EEEEEESSTTCHHHHHHHHHH
T ss_pred             CCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC--CEE--EEEecCCCCCchHHHHHHHhc
Confidence            56899999999999999999999999999998765443221  234445433  333  334332  111   111  25


Q ss_pred             CCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCC--CceEEEEEECCCCCEEEEEEcCC-----------C------
Q 022835           90 GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQRGP-----------T------  150 (291)
Q Consensus        90 ~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dp~G~~iel~~~~~-----------~------  150 (291)
                      |.|++|+||.|+|+++++++++++|++++.+|.....  |......+++|+|+.+.|++...           .      
T Consensus        83 G~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y~~~flpg~~~~~~~~~~  162 (393)
T 3isq_A           83 GDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPL  162 (393)
T ss_dssp             CSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSSSCTTCBSCSCCCTT
T ss_pred             CCcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccCcCCCCCCcccccccccc
Confidence            7799999999999999999999999999888765543  33345668999999999988521           0      


Q ss_pred             --------CCCceeEeeeeCC--chhcHHHHHHhhCCeeeeeecC-----CCcceeEEEecccccccceeEeeccccC--
Q 022835          151 --------PEPLCQVMLRVGD--LGRSIKFYEKALGMKLLRTVDK-----PEYKYTLAMLGYAEEDQTTVLELTYNYG--  213 (291)
Q Consensus       151 --------~~~~~hv~l~v~d--~~~~~~fy~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~l~~~~~--  213 (291)
                              ..+++|+++.|+|  ++++.+||+++|||++....+.     ...+....++..+  .....|+|..+..  
T Consensus       163 ~~~~~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~--~g~v~i~L~ep~~~~  240 (393)
T 3isq_A          163 LPKLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANY--EESIKMPINEPAPGK  240 (393)
T ss_dssp             GGGSCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECT--TSSCEEEEEEEECCS
T ss_pred             ccCCCCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECC--CCCEEEEEecCCCCC
Confidence                    0238999999998  9999999999999998776431     1122333344422  2346677765432  


Q ss_pred             ccc-------cccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCc
Q 022835          214 VTE-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       214 ~~~-------~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      ..+       ...|+|++|+||.|+|+.+++++|    +++|++++..|.
T Consensus       241 ~~s~I~~fL~~~~G~Gi~HiA~~~dDi~~~~~~l----~~~Gv~~l~~P~  286 (393)
T 3isq_A          241 KKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHL----RERGLEFLSVPS  286 (393)
T ss_dssp             BCCHHHHHHHHHTSSEEEEEEEEESCHHHHHHHH----HHTTCCBCCCCH
T ss_pred             CCCHHHHHHHHcCCCCcceEEEEcCCHHHHHHHH----HHcCCccCCCCc
Confidence            111       124789999999999999999999    999999998764

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.94  E-value=2.9e-25  Score=194.89  Aligned_cols=227  Identities=16%  Similarity=0.205  Sum_probs=157.9

Q ss_pred             CCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCC--CceEEEEEecCCCCcceEEEeeecCCC-----------
Q 022835           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE--EKYSNAFLGFGPEQSHFVVELTYNYGV-----------   84 (291)
Q Consensus        18 ~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~l~~~~~~~~-----------   84 (291)
                      .+.+++|+||.|.|+|++++.+||++.|||+++.+...+.  .....+++..|  ...+.  +..+...           
T Consensus        26 ~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G--~~~l~--L~~~~~~~~~~~~~p~~~  101 (418)
T 1sp8_A           26 RFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG--SLSFL--FTAPYAHGADAATAALPS  101 (418)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET--TEEEE--EEEECCSSCCGGGCSSTT
T ss_pred             cccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC--CEEEE--EecCCCCccccccccccc
Confidence            3568999999999999999999999999999987754332  23455555543  33333  3332111           


Q ss_pred             ---c---c--ccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC-------
Q 022835           85 ---T---S--YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP-------  149 (291)
Q Consensus        85 ---~---~--~~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~-------  149 (291)
                         .   .  ..++.|++|+||.|+|+++++++++++|+++...|....++ .....+++|+|..++|+++..       
T Consensus       102 ~~~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~-~~~~~i~~~Gg~~~~lvd~~~~~~~~~f  180 (418)
T 1sp8_A          102 FSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRG-FRLAEVELYGDVVLRYVSYPDGAAGEPF  180 (418)
T ss_dssp             CCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETT-EEEEEEEEETTEEEEEEECCTTGGGSSS
T ss_pred             ccchhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCc-eEEEEEecCCCEEEEEEccCCCCCCccc
Confidence               0   0  12457899999999999999999999999988776543222 223455666666666665431       


Q ss_pred             ------------C---CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCc-----ceeEEEecccccccceeEeec
Q 022835          150 ------------T---PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-----KYTLAMLGYAEEDQTTVLELT  209 (291)
Q Consensus       150 ------------~---~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~l~  209 (291)
                                  .   ..+++|+++.|+|++++.+||+++|||++.++....+.     +....++..+.  ....+++.
T Consensus       181 ~p~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~--g~i~l~l~  258 (418)
T 1sp8_A          181 LPGFEGVASPGAADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS--ENVLLPLN  258 (418)
T ss_dssp             STTCEECCCTTCCCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS--SCCEEEEE
T ss_pred             CCCCcccCCCCCCCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCC--CcEEEEEe
Confidence                        0   12489999999999999999999999999877643221     22333444322  24556665


Q ss_pred             cccC---ccc----c---ccCcceeeEEEEecchHHHHHHHHHHHHH----hCCeeccCC
Q 022835          210 YNYG---VTE----Y---TKGNAYAQVAISTDDVYKSAEVVNLVTQE----LGGKITRQP  255 (291)
Q Consensus       210 ~~~~---~~~----~---~~~~~~~h~~f~v~d~~~~~~~l~~~~~~----~G~~~~~~p  255 (291)
                      .+..   ..+    +   ..++|++|+||.|+|+.+++++|    ++    +|++++..|
T Consensus       259 e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L----~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          259 EPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREM----QARSAMGGFEFMAPP  314 (418)
T ss_dssp             EECCCSSSCCHHHHHHHHHTSSEEEEEEEEETTHHHHHHHH----HTSGGGTSCCBCCCC
T ss_pred             ecccccCCCcchhhhhhccCCCCcCEEEEEeCCHHHHHHHH----hhhhccCCeEEccCC
Confidence            5421   111    1   35779999999999999999999    88    799999886

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.93  E-value=3.1e-25  Score=192.08  Aligned_cols=246  Identities=13%  Similarity=0.108  Sum_probs=167.3

Q ss_pred             CCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCc--cc--cCCCCc
Q 022835           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT--SY--DIGTGF   93 (291)
Q Consensus        18 ~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~--~~--~~~~~~   93 (291)
                      .+.+++++||.+.|+|++++.+|| +.|||+++.+....    ..+.+..+  ...+++  ...+...  .+  .++.++
T Consensus         7 ~~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~----~~~l~~~g--~~~l~l--~~~~~~~~~~~~~~~g~gv   77 (357)
T 1cjx_A            7 PMGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK----NVHLYRQG--EINLIL--NNEPNSIASYFAAEHGPSV   77 (357)
T ss_dssp             TTCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS----SEEEEEET--TEEEEE--ECCSSSHHHHHHHHHSSEE
T ss_pred             CcccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe----eEEEEecC--CEEEEE--ECCCCchhhhhhhhcCCeE
Confidence            367999999999999999999999 78999998764321    12334333  333333  3222211  11  256789


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC-----------------------
Q 022835           94 GHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT-----------------------  150 (291)
Q Consensus        94 ~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~-----------------------  150 (291)
                      .++||.|+|+++++++++++|+++...+.. + |......+++|+|..++|+++...                       
T Consensus        78 ~~iaf~V~D~~~~~~~l~~~G~~~~~~~~~-~-g~~~~~~~~~~gg~~~~~vd~~~~~~~~~~~~f~~~~~~~~~~~~~~  155 (357)
T 1cjx_A           78 CGMAFRVKDSQKAYNRALELGAQPIHIDTG-P-MELNLPAIKGIGGAPLYLIDRFGEGSSIYDIDFVYLEGVERNPVGAG  155 (357)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCBCCCCCC-T-TCBCCCEEECGGGCEEEEECCCSSSCCHHHHHEEECTTCCSSCCTTS
T ss_pred             EEEEEEeCCHHHHHHHHHHcCCEEeecCCC-C-CcEEEEeeeCCCCeEEEEECCCCCCCCcCCCCcccCCccccCCCCCC
Confidence            999999999999999999999998765532 1 222235577888888887765311                       


Q ss_pred             CCCceeEeeeeC--CchhcHHHHHHhhCCeeeeeecCCC--cce--eEEEecccccccceeEeeccc-cCccc-------
Q 022835          151 PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPE--YKY--TLAMLGYAEEDQTTVLELTYN-YGVTE-------  216 (291)
Q Consensus       151 ~~~~~hv~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~l~l~~~-~~~~~-------  216 (291)
                      ..+++|+++.|+  |++++.+||+++|||++.......+  .+.  ...+...    ....+++... .....       
T Consensus       156 i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~----g~~~i~L~~~~~~~~~~~~~~~~  231 (357)
T 1cjx_A          156 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD----GMIRIPLNEESSKGAGQIEEFLM  231 (357)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT----SSCEEEEEEECTTCCSHHHHHHH
T ss_pred             eeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCC----CCEEEEEeeecCCCCChHHHhHH
Confidence            124889999999  9999999999999999887643221  111  2222221    2345666543 21111       


Q ss_pred             cccCcceeeEEEEecchHHHHHHHHHHHHHhCCeecc-CCc--------cCCCCCc--------eEEEEEC----CCCce
Q 022835          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR-QPG--------PIPGLNT--------KITSFVD----PDGWK  275 (291)
Q Consensus       217 ~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~-~p~--------~~~~~~~--------~~~~~~D----PdG~~  275 (291)
                      ...+.+++|++|.|+|+++++++|    +++|+++.. .|.        +.+..+.        .++|-+|    |+|++
T Consensus       232 ~~~g~g~~HiAf~v~Di~~~~~~L----~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~l  307 (357)
T 1cjx_A          232 QFNGEGIQHVAFLTDDLVKTWDAL----KKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLL  307 (357)
T ss_dssp             HHTSSBCCEEEEEESCHHHHHHHH----HHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEE
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHH----HHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeE
Confidence            124568999999999999999999    999999988 552        1111111        2477788    88999


Q ss_pred             EEEecch
Q 022835          276 TVLVDNE  282 (291)
Q Consensus       276 ie~~~~~  282 (291)
                      ++|++.+
T Consensus       308 lqift~~  314 (357)
T 1cjx_A          308 LQIFSET  314 (357)
T ss_dssp             EEEEBCC
T ss_pred             EEEeccC
Confidence            9998753

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.86  E-value=1.9e-20  Score=139.19  Aligned_cols=128  Identities=57%  Similarity=1.019  Sum_probs=99.1

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeC
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~  101 (291)
                      ++|+|+.|.|+|++++.+||+++|||++......+.+.+..+++..++......+.+...........+.+..|++|.|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   80 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeC
Confidence            47999999999999999999999999998776555555667777765432234455554332222334567889999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       102 di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      |+++++++|+++|+++..++...++|....++|+||+||.|||++..+
T Consensus        81 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  128 (135)
T 1f9z_A           81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             CHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCC
Confidence            999999999999999988777777776445889999999999999764

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.85  E-value=5.2e-21  Score=146.06  Aligned_cols=127  Identities=18%  Similarity=0.172  Sum_probs=91.0

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCc--cc---cCCCCc
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT--SY---DIGTGF   93 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~--~~---~~~~~~   93 (291)
                      ...|+|.|+.|.|+|+++|++||+++|||++..+...++.  ....+....+.....+.........  +.   ..+.+.
T Consensus        22 ~~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~   99 (155)
T 4g6x_A           22 SNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGAD--RWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGI   99 (155)
T ss_dssp             -CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTC
T ss_pred             cCceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCc--eEEEEeccCCCcceEEEeccCCCccccccccccccCCc
Confidence            3467999999999999999999999999998776554332  2223322222222333222222111  11   134577


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           94 GHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        94 ~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .|++|.|+|+++++++|+++|+++..+|...++|.  .++|+|||||+|||+|..+
T Consensus       100 ~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~--~~~f~DPdGn~iel~q~~~  153 (155)
T 4g6x_A          100 PAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVV--TAILDDTCGNLIQLMQIAY  153 (155)
T ss_dssp             CSEEEEESCHHHHHHHHHHTTCCEEEEEEECSSCE--EEEEECSSSCEEEEEEC--
T ss_pred             eEEEeeechhhhhhhHHhcCCcEEeeCCEEcCCeE--EEEEECCCCCEEEEEEECC
Confidence            89999999999999999999999998888888763  3889999999999999753

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.84  E-value=5e-20  Score=136.40  Aligned_cols=123  Identities=25%  Similarity=0.317  Sum_probs=94.0

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeee-------cCCC---cccc
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY-------NYGV---TSYD   88 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~-------~~~~---~~~~   88 (291)
                      |++++|+||.|.|+|++++.+||+++|||++..+...++.....+++..++  .  .+.+..       ....   ....
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~--~--~l~l~~~~~~~~~~~~~~~~~~~~   76 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGD--I--ELEIFGNKLTDSNYCAPPERISWP   76 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETT--E--EEEEEECCTTSTTCCCCCCCCCSS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCC--e--EEEEEecccccccccCCccccCCC
Confidence            468999999999999999999999999999988766555554456666543  2  333333       1111   1122


Q ss_pred             -CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835           89 -IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        89 -~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                       .+.+..|++|.|+|+++++++|+++|+++...+...++|... ++|+||+|+.|||+|
T Consensus        77 ~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           77 REACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKM-AFFFDPDGLPLELHE  134 (134)
T ss_dssp             SCCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEE-EEEECTTCCEEEEEC
T ss_pred             CCCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceEE-EEEECCCCCEEEEeC
Confidence             455789999999999999999999999988776666666554 899999999999986

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.84  E-value=4.3e-20  Score=137.21  Aligned_cols=128  Identities=50%  Similarity=0.886  Sum_probs=96.0

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecc
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d  232 (291)
                      ++.|+.|.|+|++++.+||+++|||++.......++.+.++++..++...+..+++...........+.+..|++|.|+|
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~d   81 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN   81 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSC
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeCC
Confidence            68999999999999999999999999887654344445566666543222455666543322222344578899999999


Q ss_pred             hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhh
Q 022835          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                      ++++.+++    +++|+++..+|...+++..+++||+|||||+|||++..+.
T Consensus        82 ~~~~~~~l----~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           82 AAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             HHHHHHHH----HHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             HHHHHHHH----HHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            99999999    9999999888776665334789999999999999998754

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.83  E-value=2e-20  Score=142.75  Aligned_cols=125  Identities=17%  Similarity=0.139  Sum_probs=90.9

Q ss_pred             CCCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc-----cccCccee
Q 022835          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-----YTKGNAYA  224 (291)
Q Consensus       150 ~~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----~~~~~~~~  224 (291)
                      ...++.|+.|.|+|+++|++||+++|||++..+.+..+.  .+..+..........+.+........     ...+.+..
T Consensus        23 ~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~  100 (155)
T 4g6x_A           23 NAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGAD--RWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIP  100 (155)
T ss_dssp             CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCC
T ss_pred             CceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCc--eEEEEeccCCCcceEEEeccCCCccccccccccccCCce
Confidence            456899999999999999999999999998766544443  33333322222222232222111111     11234778


Q ss_pred             eEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          225 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       225 h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      |++|.|+|++++++++    +++|+++..+|...++  ++++||+|||||+|||+|..
T Consensus       101 ~l~f~VdDvda~~~~l----~~~Gv~~~~~p~~~~~--g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          101 AASFAVDDIAAEYERL----SALGVRFTQEPTDMGP--VVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             SEEEEESCHHHHHHHH----HHTTCCEEEEEEECSS--CEEEEEECSSSCEEEEEEC-
T ss_pred             EEEeeechhhhhhhHH----hcCCcEEeeCCEEcCC--eEEEEEECCCCCEEEEEEEC
Confidence            9999999999999999    9999999998887766  58899999999999999864

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.83  E-value=2.6e-19  Score=132.57  Aligned_cols=126  Identities=17%  Similarity=0.225  Sum_probs=94.3

Q ss_pred             CCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEE
Q 022835           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        18 ~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~   97 (291)
                      .+++++|+||.|.|+|++++.+||+++|||++......+.+ .....+..+.+  ...+.+.............+..|++
T Consensus         8 ~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~~~   84 (133)
T 4hc5_A            8 SLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPPGA--QTQVALGLPSWYEDGRKPGGYTGIS   84 (133)
T ss_dssp             CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECTTC--SCEEEEECGGGCSSCCCSCEEEEEE
T ss_pred             cccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECCCC--ceEEEEecCcccccccCCCCeEEEE
Confidence            36789999999999999999999999999999876543222 22333433322  3344444432111112234678999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835           98 IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        98 ~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      |.|+|+++++++|+++|+++..++...++|.+ .++|+||+|+.|||++.
T Consensus        85 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           85 LITRDIDEAYKTLTERGVTFTKPPEMMPWGQR-ATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             EEESCHHHHHHHHHHTTCEESSSCEECTTSCE-EEEEECTTCEEEEEEEC
T ss_pred             EEeCCHHHHHHHHHHCCCEeecCCCcCCCCCE-EEEEECCCCCEEEEEeC
Confidence            99999999999999999999988888888764 48999999999999873

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.83  E-value=3.4e-19  Score=134.13  Aligned_cols=125  Identities=55%  Similarity=0.920  Sum_probs=93.7

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      +++++|+||.|.|+|++++.+||+++|||++......+++.+..+++..++......+.+...........+.+..|++|
T Consensus         4 m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f   83 (144)
T 2c21_A            4 MPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAI   83 (144)
T ss_dssp             --CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEE
T ss_pred             CccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEE
Confidence            56899999999999999999999999999998765444445556777765431234455554433222334567899999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           99 ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+|+++++++|+++|+++..+     +|...+++|+||+||.|||++..
T Consensus        84 ~v~d~~~~~~~l~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           84 GVEDVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             EeCCHHHHHHHHHHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcC
Confidence            9999999999999999997764     34444348999999999999864

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.82  E-value=2.1e-19  Score=131.74  Aligned_cols=123  Identities=23%  Similarity=0.338  Sum_probs=89.9

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCC--Cc-cccCCCCceE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG--VT-SYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~--~~-~~~~~~~~~~   95 (291)
                      |++.+++|+.|.|+|++++.+||+++|||++......++......++..++.    .+.+.....  .. ....+.+..|
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~l~l~~~~~~~~~~~~~~~~g~~~   76 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ----ELEIFISDQFPARPSYPEALGLRH   76 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE----EEEEEECTTCCCCCCSSCCSSCCC
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe----EEEEEeccCCCCCCCCCCCccceE
Confidence            4688999999999999999999999999998765433222222344555432    344443211  11 1123457889


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835           96 FAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        96 i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      ++|.|+|+++++++|+++|+++...+...++|.. .++|+||+|+.|||+|
T Consensus        77 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           77 LAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKK-MTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCCCCCEECTTTCCE-EEEEECTTCCEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHcCCccccccccCCCCcE-EEEEECCCCCEEEeeC
Confidence            9999999999999999999998766655556654 4889999999999975

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.82  E-value=2.1e-19  Score=132.06  Aligned_cols=120  Identities=24%  Similarity=0.377  Sum_probs=93.1

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCC--ccccCCCCceEEEEE
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV--TSYDIGTGFGHFAIA   99 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~i~~~   99 (291)
                      ++|+||.|.|+|++++.+||+++|||++......+..++..+++..++ +  ..+.+......  .+...+.+..|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED-G--ARLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS-S--CEEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC-C--cEEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            579999999999999999999999999876644444456677777643 2  34445443322  222245678999999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEE
Q 022835          100 TED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       100 v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      |+|   +++++++|+++|+++..+|...++|.+. ++|+||+||.|||+
T Consensus        79 v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYE-SVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEECTTSCEE-EEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCcccCCCCcEE-EEEECCCCCEEEEe
Confidence            999   8899999999999998877777776554 88999999999996

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.82  E-value=1.8e-19  Score=133.42  Aligned_cols=123  Identities=24%  Similarity=0.372  Sum_probs=90.6

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCC-ccc------cCCCC
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TSY------DIGTG   92 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-~~~------~~~~~   92 (291)
                      |+.+|+||.|.|+|++++.+||+++|||++......+..+...+++..++  ..  +++...... .+.      ..+.+
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~--~~--~~l~~~~~~~~~~~~~~~~~~~~g   77 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGN--TK--MELLHPLGLDSPIAGFLQKNKAGG   77 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSS--SE--EEEEEECSTTCTTHHHHHHCTTCE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCC--EE--EEEEecCCCCchhhhhhhccCCCC
Confidence            68999999999999999999999999999876554444455667777653  22  333322111 111      23557


Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeeecCC-ccCCCCceEEEEE--ECCCCCEEEEEEc
Q 022835           93 FGHFAIATEDVYKLVENIRAKGGNVTREP-GPLKGGTTHIAFV--KDPDGYIFELIQR  147 (291)
Q Consensus        93 ~~~i~~~v~di~~~~~~l~~~G~~~~~~~-~~~~~g~~~~~~~--~dp~G~~iel~~~  147 (291)
                      ..|++|.|+|+++++++|+++|+++..++ ....+|... .++  +||+|+.|||+|.
T Consensus        78 ~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~-~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           78 MHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPV-IFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEE-EEECSCSSCCSCEEEEEC
T ss_pred             ceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceE-EEEecCCCCcEEEEEEcC
Confidence            89999999999999999999999977653 333444433 555  8999999999973

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.81  E-value=4.1e-19  Score=145.68  Aligned_cols=146  Identities=17%  Similarity=0.223  Sum_probs=110.4

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      ..+.+|+||.|.|+|++++.+||+++|||++..+..   +   .+++..++    ..+.+.....     .+.+..|++|
T Consensus        22 ~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~---~---~~~L~~g~----~~l~l~~~~~-----~~~~~~hiaf   86 (252)
T 3pkv_A           22 GHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA---D---AFTIQLGV----SQIQFRAAAD-----GTKPFYHIAI   86 (252)
T ss_dssp             ---CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS---S---EEEEEETT----EEEEEEECCT-----TCCCCCEEEE
T ss_pred             CcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC---C---EEEEEeCC----EEEEEEECCC-----CCCCeeEEEE
Confidence            358899999999999999999999999999876533   1   35565543    2344443221     2346789999


Q ss_pred             EeC--CHHHHHHHHHHcCCeeecC-Ccc----CCCCceEEEEEECCCCCEEEEEEcCCC------------CCCceeEee
Q 022835           99 ATE--DVYKLVENIRAKGGNVTRE-PGP----LKGGTTHIAFVKDPDGYIFELIQRGPT------------PEPLCQVML  159 (291)
Q Consensus        99 ~v~--di~~~~~~l~~~G~~~~~~-~~~----~~~g~~~~~~~~dp~G~~iel~~~~~~------------~~~~~hv~l  159 (291)
                      .|+  ++++++++|+++ +++..+ +..    ..++.. .+||+|||||.+||++....            +.++.||.|
T Consensus        87 ~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~-~~~f~DPdGn~iEl~~~~~~~~~~~~~~~~~~i~glghV~L  164 (252)
T 3pkv_A           87 NIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAY-SCYVEDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEINI  164 (252)
T ss_dssp             EECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEE-EEEEECTTCCEEEEEEESSSSCCCCSCCCGGGCCEEEEEEE
T ss_pred             EecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeE-EEEEECCCCCEEEEEEeCCCCccccCCCCHHHCcEeeeEEE
Confidence            984  699999999999 887652 221    234444 49999999999999987642            346999999


Q ss_pred             eeCCchhcHHHHHHhhCCeeeee
Q 022835          160 RVGDLGRSIKFYEKALGMKLLRT  182 (291)
Q Consensus       160 ~v~d~~~~~~fy~~~lG~~~~~~  182 (291)
                      .|+|++++.+|| ++|||+...+
T Consensus       165 ~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          165 TTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             ECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             EeCCHHHHHHHH-HHcCCCcccC
Confidence            999999999999 9999998765

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.81  E-value=1.5e-18  Score=131.69  Aligned_cols=128  Identities=16%  Similarity=0.231  Sum_probs=93.4

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEecc-----------CCCceEEEEEecCCCCcceEEEeeecCCCc--
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDV-----------PEEKYSNAFLGFGPEQSHFVVELTYNYGVT--   85 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~-----------~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~--   85 (291)
                      +++++|+|+.|.|+|++++.+||++ |||++......           +......+++..+++...+.+.........  
T Consensus         7 ~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~   85 (153)
T 1ss4_A            7 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   85 (153)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             ccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCccc
Confidence            4689999999999999999999999 99999765432           123445667766543233322211111111  


Q ss_pred             ---cccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           86 ---SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        86 ---~~~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                         ....+.|+.|++|.|+|+++++++|+++|+++..++...++|.+ .+||+||+|++|||++..
T Consensus        86 ~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           86 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYR-LCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEE-EEEEECGGGCEEEEEEEC
T ss_pred             ccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceE-EEEEECCCCCEEEEEecc
Confidence               11234567899999999999999999999999887766666644 489999999999999875

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.81  E-value=1.4e-19  Score=134.23  Aligned_cols=123  Identities=21%  Similarity=0.247  Sum_probs=90.7

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEe-ccCCCceEEEEEecCCCCcceEEEeeecCCC-cc---cc-CCCC
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKR-DVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TS---YD-IGTG   92 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-~~---~~-~~~~   92 (291)
                      .|+++|+||+|.|+|++++.+||+ +|||++..+. ..+..+...+++..++    ..+++..+... .+   +. .+.+
T Consensus         3 ~M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~g   77 (133)
T 3hdp_A            3 HMSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGG----YRVELVAPDGEDSPINKTIKKGST   77 (133)
T ss_dssp             CCCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETT----EEEEEEEESSTTCTHHHHTTTSCE
T ss_pred             ccceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCC----EEEEEEecCCCCChHHHHHhcCCc
Confidence            478999999999999999999999 9999986542 2334455667776542    23444433221 11   11 1568


Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeeecCCc--cCCCCceEEEEEECCCCCEEEEEEc
Q 022835           93 FGHFAIATEDVYKLVENIRAKGGNVTREPG--PLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        93 ~~~i~~~v~di~~~~~~l~~~G~~~~~~~~--~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      +.|+||.|+|+++++++|+++|+++...|.  ...+|.. .+|++||||++|||+|.
T Consensus        78 ~~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~-~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           78 PYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRK-VAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEE-EEEEEETTTEEEEEEEC
T ss_pred             eEEEEEEcCCHHHHHHHHHHcCCccccCCeecccCCCce-EEEEECCCceEEEEecC
Confidence            889999999999999999999999876543  2334544 58999999999999984

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.81  E-value=3.2e-19  Score=140.28  Aligned_cols=130  Identities=31%  Similarity=0.555  Sum_probs=100.4

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEeccccccc---------------ceeEeeccccCcc
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQ---------------TTVLELTYNYGVT  215 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~l~~~~~~~  215 (291)
                      ..+++|+.|.|+|++++.+||+++|||++..+....++++.+++++.++...               ...+++.......
T Consensus        32 ~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  111 (187)
T 3vw9_A           32 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTE  111 (187)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTGG
T ss_pred             eeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCCC
Confidence            4579999999999999999999999999988766556667777777543211               2456664332211


Q ss_pred             -----cccc----CcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhHH
Q 022835          216 -----EYTK----GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       216 -----~~~~----~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~~  286 (291)
                           .+..    ..+.+|++|.|+|++++++++    +++|+++...|...++  ++++||+|||||+|||++.+.+.+
T Consensus       112 ~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l----~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~~  185 (187)
T 3vw9_A          112 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKMAT  185 (187)
T ss_dssp             GCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHH----HHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECGGGSGG
T ss_pred             CCCccccccCCCCCCceeEEEEEECCHHHHHHHH----HHCCCeEeeCCccCCc--ceEEEEECCCCCEEEEEEcccccc
Confidence                 1111    237889999999999999999    9999999988876554  457899999999999999987754

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.80  E-value=2.3e-19  Score=137.73  Aligned_cols=127  Identities=22%  Similarity=0.435  Sum_probs=96.3

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCc-c-----ccCCCC
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT-S-----YDIGTG   92 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~-~-----~~~~~~   92 (291)
                      +++++|+||+|.|+|++++++||+++|||++......+..+...+++..++    ..+++....... +     ...+.|
T Consensus         4 ~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~----~~l~l~~~~~~~~~~~~~~~~~~~g   79 (161)
T 3oa4_A            4 EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGE----SKIELLEPLSEESPIAKFIQKRGEG   79 (161)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETT----EEEEEEEESSTTSHHHHHHHHHCSE
T ss_pred             cccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCC----eEEEEEeECCCCChHHHHhhcCCCC
Confidence            357899999999999999999999999999987665555556677776543    234444332211 1     123568


Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeeecC-CccCCCCceEEEEE--ECCCCCEEEEEEcCCC
Q 022835           93 FGHFAIATEDVYKLVENIRAKGGNVTRE-PGPLKGGTTHIAFV--KDPDGYIFELIQRGPT  150 (291)
Q Consensus        93 ~~~i~~~v~di~~~~~~l~~~G~~~~~~-~~~~~~g~~~~~~~--~dp~G~~iel~~~~~~  150 (291)
                      +.|+||.|+|+++++++|+++|+++..+ +....+|.. .+|+  +||+|++|||++..+.
T Consensus        80 ~~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~-~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           80 IHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQ-VAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCE-EEEBCGGGTTTCCEEEEECCCC
T ss_pred             eEEEEEEECCHHHHHHHHHHCCCEecccCcccCCCCcE-EEEEeccCCCeEEEEEEecCCc
Confidence            9999999999999999999999998776 555555544 3566  4999999999998754

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.79  E-value=2.2e-18  Score=129.94  Aligned_cols=130  Identities=23%  Similarity=0.354  Sum_probs=95.8

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCC--CcceEEEeeecCCC-cc-----ccCC
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE--QSHFVVELTYNYGV-TS-----YDIG   90 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~~~~~~~-~~-----~~~~   90 (291)
                      .++.+++||.|.|+|++++.+||+++|||++......+..+...+++..++.  ..+..+++...... .+     ...+
T Consensus         5 ~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~   84 (148)
T 1jc4_A            5 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   84 (148)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCC
Confidence            4689999999999999999999999999999876554444555677776542  11234555443221 11     1233


Q ss_pred             --CCceEEEEEeCCHHHHHHHHHHcCCeee-cCCccCCCCceEEEEE--ECCCCCEEEEEEcCC
Q 022835           91 --TGFGHFAIATEDVYKLVENIRAKGGNVT-REPGPLKGGTTHIAFV--KDPDGYIFELIQRGP  149 (291)
Q Consensus        91 --~~~~~i~~~v~di~~~~~~l~~~G~~~~-~~~~~~~~g~~~~~~~--~dp~G~~iel~~~~~  149 (291)
                        .+..|++|.|+|+++++++|+++|+++. ..+....+|.. .+++  +||+|++|||++...
T Consensus        85 ~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~-~~~~~~~DPdG~~iel~~~~~  147 (148)
T 1jc4_A           85 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR-INFMHPKSGKGVLIELTQYPK  147 (148)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCE-EEEBCGGGGTTSCEEEEECCC
T ss_pred             CCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceE-EEEEeecCCCcEEEEEEecCC
Confidence              6788999999999999999999999987 45555555544 3556  899999999998753

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.79  E-value=3.6e-18  Score=134.28  Aligned_cols=128  Identities=34%  Similarity=0.597  Sum_probs=99.1

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCc---------------ceEEEeeecCC
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS---------------HFVVELTYNYG   83 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~---------------~~~l~~~~~~~   83 (291)
                      ....+|+||.|.|+|++++++||+++|||++..+...+...+..+++..++...               ...+++.....
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  109 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG  109 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETT
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecC
Confidence            456899999999999999999999999999988777667778888887654311               23455533221


Q ss_pred             C-----cccc----CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           84 V-----TSYD----IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        84 ~-----~~~~----~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .     ..+.    ...++.|++|.|+|+++++++|+++|+++...+...+++.  ++||+||+|++|||++..
T Consensus       110 ~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~--~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          110 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG--LAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTT--CEEEECTTCCEEEEECGG
T ss_pred             CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcce--EEEEECCCCCEEEEEEcc
Confidence            1     1111    2237889999999999999999999999988877666654  378999999999999875

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.79  E-value=1.2e-18  Score=132.65  Aligned_cols=128  Identities=19%  Similarity=0.214  Sum_probs=93.5

Q ss_pred             CCCCCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccC--------CCceEEEEEecCCCCcceEEEeeecCCCc-
Q 022835           15 EWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--------EEKYSNAFLGFGPEQSHFVVELTYNYGVT-   85 (291)
Q Consensus        15 ~~~~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~l~~~~~~~~~-   85 (291)
                      ..+.+++++|+||.|.|+|++++.+||+++|||++......+        .+  ...++..+++   ..+.+....... 
T Consensus        11 ~~~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~l~l~~~~~~~~   85 (156)
T 3kol_A           11 VLAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASG--KVANFITPDG---TILDLFGEPELSP   85 (156)
T ss_dssp             CCCTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTT--SEEEEECTTS---CEEEEEECTTCCC
T ss_pred             ccCccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCC--cEEEEEeCCC---CEEEEEecCCCCc
Confidence            344567999999999999999999999999999987532211        11  2355555432   234444332211 


Q ss_pred             ----cccCCCCceEEEEEeC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           86 ----SYDIGTGFGHFAIATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        86 ----~~~~~~~~~~i~~~v~--di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                          +.....+..|++|.|+  |+++++++|+++|+++...+...++|.  .+||+||+||.|||++...
T Consensus        86 ~~~~~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~--~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           86 PDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGR--GVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             SSSSTTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCE--EEEEECTTSCEEEEEECCC
T ss_pred             CCCCCCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCcc--EEEEECCCCCEEEEEecCC
Confidence                1123457899999998  999999999999999887777776664  4899999999999998764

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.79  E-value=2.8e-18  Score=127.73  Aligned_cols=123  Identities=22%  Similarity=0.307  Sum_probs=90.7

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCC--ccc-cCCCCceE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV--TSY-DIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~--~~~-~~~~~~~~   95 (291)
                      |++++|.||.|.|+|++++.+||+++|||++......++..+..+++. +  .  ..+.+......  ... ..+.+..|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~--~--~~l~l~~~~~~~~~~~~~~~~g~~h   75 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G--G--LSIVLREHDGGGTDLFDETRPGLDH   75 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T--S--CEEEEEEETTCSSSCCCTTSSEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C--C--CEEEEEeCCCCcccCCCCCCCCcce
Confidence            468999999999999999999999999999987655333334445554 2  2  23444433221  111 23457889


Q ss_pred             EEEEe---CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           96 FAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        96 i~~~v---~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      ++|.|   +|+++++++|+++|+++.. +...++|  ..++|+||+||+|||++..+
T Consensus        76 ~~f~v~~~~d~~~~~~~l~~~G~~~~~-~~~~~~g--~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           76 LSFSVESMTDLDVLEERLAKAGAAFTP-TQELPFG--WILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHTCCBCC-CEEETTE--EEEEEECTTCCEEEEEEECT
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCcccC-ccccCCc--eEEEEECCCCCEEEEEEcCC
Confidence            99999   8999999999999999764 4444555  34899999999999999764

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.79  E-value=1.2e-18  Score=127.88  Aligned_cols=120  Identities=20%  Similarity=0.251  Sum_probs=90.8

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc--cccCcceeeEEEE
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKGNAYAQVAIS  229 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~h~~f~  229 (291)
                      .++.|+.|.|+|++++.+||+++|||++..+...++.++..+++..++   +..+.+........  ...+.+..|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED---GARLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS---SCEEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC---CcEEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            478999999999999999999999999887654334445555665433   35566654332211  1244578999999


Q ss_pred             ecc---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEe
Q 022835          230 TDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       230 v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~  279 (291)
                      |+|   ++++.+++    +++|+++..+|...+. +.+.+||+|||||+|||+
T Consensus        79 v~d~~~v~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKL----RQDGFAIAGEPRMTGD-GYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHH----HHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHH----HHcCCeEecCcccCCC-CcEEEEEECCCCCEEEEe
Confidence            999   77888888    9999999887776554 357899999999999996

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.79  E-value=2e-18  Score=129.88  Aligned_cols=125  Identities=44%  Similarity=0.702  Sum_probs=91.9

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++|||++..+...+++.+...++..++...+..+.+...........+.+.+|++|.|
T Consensus         6 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v   85 (144)
T 2c21_A            6 SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGV   85 (144)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEE
T ss_pred             cceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEEEe
Confidence            45789999999999999999999999998876543334455556654432123556665543322233445789999999


Q ss_pred             cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhh
Q 022835          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                      +|++++.+++    +++|+++..+     .+...++||+|||||+|||++..+.
T Consensus        86 ~d~~~~~~~l----~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~~~  130 (144)
T 2c21_A           86 EDVKELVADM----RKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEKTM  130 (144)
T ss_dssp             SCHHHHHHHH----HHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHHHH
T ss_pred             CCHHHHHHHH----HHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcCch
Confidence            9999999999    9999998765     2123445999999999999997654

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.78  E-value=1.7e-18  Score=128.03  Aligned_cols=122  Identities=19%  Similarity=0.251  Sum_probs=89.6

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCcccc-------ccCccee
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY-------TKGNAYA  224 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-------~~~~~~~  224 (291)
                      .+++|+.|.|+|++++.+||+++|||++..+...++.+...+++..+    +..+++.........       ..+.+.+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~g~~   79 (134)
T 3rmu_A            4 GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG----NTKMELLHPLGLDSPIAGFLQKNKAGGMH   79 (134)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS----SSEEEEEEECSTTCTTHHHHHHCTTCEEE
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC----CEEEEEEecCCCCchhhhhhhccCCCCce
Confidence            36899999999999999999999999988765443434555666643    234555443221111       2345889


Q ss_pred             eEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEE--ECCCCceEEEecc
Q 022835          225 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSF--VDPDGWKTVLVDN  281 (291)
Q Consensus       225 h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~--~DPdG~~ie~~~~  281 (291)
                      |++|.|+|++++.+++    +++|+++..++......+.++.++  +|||||+|||+|.
T Consensus        80 hi~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           80 HICIEVDNINAAVMDL----KKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEEEESCHHHHHHHH----HHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EEEEEcCCHHHHHHHH----HHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            9999999999999999    999999887755544334456666  8999999999873

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.78  E-value=3.3e-18  Score=126.49  Aligned_cols=120  Identities=23%  Similarity=0.297  Sum_probs=89.8

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeecc-------ccCcc---ccc-cC
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTY-------NYGVT---EYT-KG  220 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~-------~~~~~---~~~-~~  220 (291)
                      .+++|+.|.|+|++++.+||+++|||++..+....+.....+++..+    +..+++..       .....   ..+ .+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~   79 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG----DIELEIFGNKLTDSNYCAPPERISWPREA   79 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET----TEEEEEEECCTTSTTCCCCCCCCCSSSCC
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC----CeEEEEEecccccccccCCccccCCCCCC
Confidence            57899999999999999999999999998765544433334445532    23555544       11111   112 44


Q ss_pred             cceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       221 ~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      .+..|++|.|+|++++.+++    +++|+++...|...++ +.+.+||+|||||.|||+|
T Consensus        80 ~g~~~~~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           80 CGLRHLAFYVEDVEASRQEL----IALGIRVEEVRYDDYT-GKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SEEEEEEEECSCHHHHHHHH----HHHTCCCCCCEECTTS-CCEEEEEECTTCCEEEEEC
T ss_pred             CCeEEEEEEECCHHHHHHHH----HhCCCcccceeccCCC-ceEEEEEECCCCCEEEEeC
Confidence            58899999999999999999    9999998876665443 4689999999999999986

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.78  E-value=4.3e-18  Score=125.93  Aligned_cols=123  Identities=20%  Similarity=0.280  Sum_probs=91.3

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++|||++.......++ ..++.+..++  ....+.+...........+.+..|++|.|
T Consensus        11 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~~v   87 (133)
T 4hc5_A           11 IAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPPG--AQTQVALGLPSWYEDGRKPGGYTGISLIT   87 (133)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECTT--CSCEEEEECGGGCSSCCCSCEEEEEEEEE
T ss_pred             ccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECCC--CceEEEEecCcccccccCCCCeEEEEEEe
Confidence            45799999999999999999999999998876542222 2334444322  23445554432111112234678999999


Q ss_pred             cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      +|++++.+++    +++|+++..+|...++ +.+++||+|||||.|||++.
T Consensus        88 ~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           88 RDIDEAYKTL----TERGVTFTKPPEMMPW-GQRATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             SCHHHHHHHH----HHTTCEESSSCEECTT-SCEEEEEECTTCEEEEEEEC
T ss_pred             CCHHHHHHHH----HHCCCEeecCCCcCCC-CCEEEEEECCCCCEEEEEeC
Confidence            9999999999    9999999988887776 34899999999999999873

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.78  E-value=1.7e-18  Score=132.51  Aligned_cols=129  Identities=22%  Similarity=0.337  Sum_probs=94.4

Q ss_pred             cccCCCCCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccC--------------CCceEEEEEecCCCCcceEEE
Q 022835           12 ELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--------------EEKYSNAFLGFGPEQSHFVVE   77 (291)
Q Consensus        12 ~~~~~~~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~--------------~~~~~~~~l~~~~~~~~~~l~   77 (291)
                      +....++..+++|+||+|.|+|++++++||+++|||++......+              ..+...+++..++    ..++
T Consensus         8 ~~~~~~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~----~~le   83 (159)
T 3gm5_A            8 HSMSKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGP----LQLE   83 (159)
T ss_dssp             -CCCSSCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETT----EEEE
T ss_pred             ccccccccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCC----EEEE
Confidence            334445567999999999999999999999999999976543322              2345667776542    3345


Q ss_pred             eeecCCC-ccc-----cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCC--CCEEEEEEc
Q 022835           78 LTYNYGV-TSY-----DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD--GYIFELIQR  147 (291)
Q Consensus        78 ~~~~~~~-~~~-----~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~--G~~iel~~~  147 (291)
                      +...... ...     ..+.|+.|+||.|+|+++++++|+++|+++...+. . .| ..++||.|||  |++|||+|+
T Consensus        84 L~~~~~~~~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~-~-~g-~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           84 LIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD-F-EG-GRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             EEEECSSSCHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE-E-TT-EEEEEESCHHHHSSEEEEEEE
T ss_pred             EEEECCCCChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccc-c-CC-eeEEEEeccccCcEEEEEEec
Confidence            5443221 111     13678999999999999999999999999876542 2 23 3458999999  999999986

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.78  E-value=6.5e-18  Score=126.68  Aligned_cols=117  Identities=19%  Similarity=0.244  Sum_probs=85.1

Q ss_pred             CCCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEE
Q 022835           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        17 ~~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i   96 (291)
                      ..+++.+|.||.|.|+|++++.+||+++|||++.....  ...  ..++..++.  ...+.+....      ...+..|+
T Consensus        22 ~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~--~~~~~~~~~--~~~l~l~~~~------~~~~~~h~   89 (141)
T 3ghj_A           22 VPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARR--WNFLWVSGR--AGMVVLQEEK------ENWQQQHF   89 (141)
T ss_dssp             ----CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTT--EEEEEETTT--TEEEEEEECC------SSCCCCEE
T ss_pred             CceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCc--EEEEEecCC--CcEEEEeccC------CCCCCceE
Confidence            34678999999999999999999999999999987643  222  344554432  3445555431      12356799


Q ss_pred             EEEeC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835           97 AIATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        97 ~~~v~--di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      +|.|+  |+++++++|+++|+++..+. ...++....+||+||+||.|||+.
T Consensus        90 ~~~v~~~dld~~~~~l~~~G~~~~~~~-~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           90 SFRVEKSEIEPLKKALESKGVSVHGPV-NQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             EEEECGGGHHHHHHHHHHTTCCCEEEE-EEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             EEEEeHHHHHHHHHHHHHCCCeEeCCc-ccCCCCceEEEEECCCCCEEEEEE
Confidence            99987  99999999999999987443 333333345899999999999986

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.77  E-value=8.8e-18  Score=124.21  Aligned_cols=121  Identities=20%  Similarity=0.345  Sum_probs=89.4

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCC---CccccCCCCceE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG---VTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~   95 (291)
                      +++.+|+|+.|.|+|++++.+||+++|||++....   . .  ..++..++  ..  +.+.....   ......+.+..|
T Consensus         6 m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---~-~--~~~~~~~~--~~--~~l~~~~~~~~~~~~~~~~~~~~   75 (133)
T 3ey7_A            6 MKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---A-G--RIALEFGH--QK--INLHQLGNEFEPKAQNVRVGSAD   75 (133)
T ss_dssp             CCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-T--EEEEEETT--EE--EEEEETTSCCSSCCTTCCTTCCE
T ss_pred             eEecccCEEEEEECCHHHHHHHHHHccCceEEEec---C-C--eEEEEcCC--EE--EEEEcCCCCccccCCCCCCCccE
Confidence            45889999999999999999999999999997652   1 1  24455442  22  33332211   111224567899


Q ss_pred             EEEEeCC-HHHHHHHHHHcCCeeecCCccCCCC--ceEEEEEECCCCCEEEEEEcCC
Q 022835           96 FAIATED-VYKLVENIRAKGGNVTREPGPLKGG--TTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        96 i~~~v~d-i~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      ++|.|+| +++++++|+++|+++..++...+++  ....++|+||+||.|||++..+
T Consensus        76 ~~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           76 LCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            9999997 9999999999999988766544432  2245899999999999999764

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.77  E-value=6.5e-18  Score=128.22  Aligned_cols=122  Identities=23%  Similarity=0.347  Sum_probs=88.0

Q ss_pred             CCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCC---CccccCCCCce
Q 022835           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG---VTSYDIGTGFG   94 (291)
Q Consensus        18 ~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~   94 (291)
                      .+++.+|+||.|.|+|++++.+||+++|||++....   + +  ..++..++  .  .+.+.....   ........+..
T Consensus        18 ~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~-~--~~~l~~~~--~--~l~l~~~~~~~~~~~~~~~~g~~   87 (152)
T 3huh_A           18 QMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q-N--RKALIFGA--Q--KINLHQQEMEFEPKASRPTPGSA   87 (152)
T ss_dssp             --CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---T-T--EEEEEETT--E--EEEEEETTBCCSSCCSSCCTTCC
T ss_pred             CcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C-C--eEEEEeCC--e--EEEEeccCCcCCCcCcCCCCCcc
Confidence            367899999999999999999999999999997662   2 1  34555543  2  233333211   11122455788


Q ss_pred             EEEEEeC-CHHHHHHHHHHcCCeeecCCccCCCC--ceEEEEEECCCCCEEEEEEcCC
Q 022835           95 HFAIATE-DVYKLVENIRAKGGNVTREPGPLKGG--TTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        95 ~i~~~v~-di~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      |++|.+. |+++++++|+++|+++..+|...+++  ....++|+||+||+|||++..+
T Consensus        88 hi~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  145 (152)
T 3huh_A           88 DLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVE  145 (152)
T ss_dssp             EEEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC--
T ss_pred             EEEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEeccc
Confidence            9999986 99999999999999987766554433  2345889999999999998874

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.77  E-value=2.2e-18  Score=127.71  Aligned_cols=121  Identities=17%  Similarity=0.156  Sum_probs=88.6

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeee-cCCCcceeEEEecccccccceeEeeccccCcccc-----ccCcceee
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTV-DKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY-----TKGNAYAQ  225 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-----~~~~~~~h  225 (291)
                      .+++|+.|.|+|++++.+||+ +|||++..+. .....+....++..+    +..+++.........     ..+.+++|
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~g~~h   80 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDSPINKTIKKGSTPYH   80 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET----TEEEEEEEESSTTCTHHHHTTTSCEEEE
T ss_pred             eeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC----CEEEEEEecCCCCChHHHHHhcCCceEE
Confidence            579999999999999999999 9999986552 122233445555532    355666543322111     11568899


Q ss_pred             EEEEecchHHHHHHHHHHHHHhCCeeccCCccC-CCCCceEEEEECCCCceEEEecc
Q 022835          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPI-PGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       226 ~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~-~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      ++|.|+|++++.++|    +++|+++..+|... ...+.+++|++|||||+|||+|.
T Consensus        81 iaf~v~di~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           81 ICYEVEDIQKSIEEM----SQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEESCHHHHHHHH----TTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHH----HHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            999999999999999    99999988765432 22246889999999999999973

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.76  E-value=2.4e-17  Score=129.26  Aligned_cols=129  Identities=33%  Similarity=0.588  Sum_probs=94.2

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCC---------------CcceEEEeeecCC
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE---------------QSHFVVELTYNYG   83 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~~l~~~~~~~   83 (291)
                      +.+++++|+.|.|+|++++.+||+++|||++......++..+..+++..++.               .....+++.....
T Consensus        27 ~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~  106 (184)
T 2za0_A           27 TKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWG  106 (184)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCC
Confidence            3478999999999999999999999999999876544444455666654321               0123444543211


Q ss_pred             ----C-cccc----CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           84 ----V-TSYD----IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        84 ----~-~~~~----~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                          . ..+.    ...+..|++|.|+|+++++++|+++|+++..++...+++.  .+||+||+||+|||++...
T Consensus       107 ~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~--~~~~~DPdG~~iel~~~~~  179 (184)
T 2za0_A          107 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG--LAFIQDPDGYWIEILNPNK  179 (184)
T ss_dssp             GGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTT--CEEEECTTCCEEEEECTTT
T ss_pred             CCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCcee--EEEEECCCCCEEEEEecCc
Confidence                1 1111    1247889999999999999999999999888776655543  3789999999999998764

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.76  E-value=9.1e-18  Score=122.86  Aligned_cols=119  Identities=21%  Similarity=0.310  Sum_probs=85.5

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCC-cceeEEEecccccccceeEeeccccCcc---ccccCcceeeEE
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVT---EYTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~h~~  227 (291)
                      .++.|+.|.|+|++++.+||+++||+++.......+ ..+.. ++..++    ..+++.......   ....+.+..|++
T Consensus         4 ~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~-~~~~~~----~~l~l~~~~~~~~~~~~~~~~g~~~~~   78 (126)
T 2p25_A            4 KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKL-DLKLGS----QELEIFISDQFPARPSYPEALGLRHLA   78 (126)
T ss_dssp             SCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEE-EEEETT----EEEEEEECTTCCCCCCSSCCSSCCCEE
T ss_pred             cccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEE-EEecCC----eEEEEEeccCCCCCCCCCCCccceEEE
Confidence            478999999999999999999999999876532222 22222 233222    255554322111   112345788999


Q ss_pred             EEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      |.|+|++++.+++    +++|+++...|...++ +.+.+||+|||||+|||++
T Consensus        79 ~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           79 FKVEHIEEVIAFL----NEQGIETEPLRVDDFT-GKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EECSCHHHHHHHH----HHTTCCCCCCEECTTT-CCEEEEEECTTCCEEEEEC
T ss_pred             EEeCCHHHHHHHH----HHcCCccccccccCCC-CcEEEEEECCCCCEEEeeC
Confidence            9999999999999    9999998766554333 3588999999999999985

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.76  E-value=3.9e-18  Score=130.84  Aligned_cols=124  Identities=19%  Similarity=0.292  Sum_probs=92.6

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc------cccCccee
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE------YTKGNAYA  224 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~~~~  224 (291)
                      +.+++|+.|.|+|++++.+||+++|||++..+....+.+...+++..+    +..+++........      ...+.+++
T Consensus         6 ~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~   81 (161)
T 3oa4_A            6 SNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG----ESKIELLEPLSEESPIAKFIQKRGEGIH   81 (161)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET----TEEEEEEEESSTTSHHHHHHHHHCSEEE
T ss_pred             cCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC----CeEEEEEeECCCCChHHHHhhcCCCCeE
Confidence            457999999999999999999999999988765444444556666542    34566654332211      12356899


Q ss_pred             eEEEEecchHHHHHHHHHHHHHhCCeeccC-CccCCCCCceEEEE--ECCCCceEEEecchh
Q 022835          225 QVAISTDDVYKSAEVVNLVTQELGGKITRQ-PGPIPGLNTKITSF--VDPDGWKTVLVDNED  283 (291)
Q Consensus       225 h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~-p~~~~~~~~~~~~~--~DPdG~~ie~~~~~~  283 (291)
                      |++|.|+|+++++++|    +++|+++..+ |....+ +.+++|+  +||||++|||++..+
T Consensus        82 Hiaf~V~Did~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           82 HIAIGVKSIEERIQEV----KENGVQMINDEPVPGAR-GAQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             EEEEECSCHHHHHHHH----HHTTCCBSCSSCEECGG-GCEEEEBCGGGTTTCCEEEEECCC
T ss_pred             EEEEEECCHHHHHHHH----HHCCCEecccCcccCCC-CcEEEEEeccCCCeEEEEEEecCC
Confidence            9999999999999999    9999999876 443322 3467777  499999999999764

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.75  E-value=1.8e-17  Score=120.18  Aligned_cols=115  Identities=17%  Similarity=0.168  Sum_probs=84.4

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEe
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v  100 (291)
                      ++++.|+.|.|+|++++.+||+++|||++.....    .  .+++..++  ..+.+  ...........+.+ .|++|.|
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~--~~~~~~~~--~~l~l--~~~~~~~~~~~~~~-~~~~~~v   71 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAND----G--FAQFTIGS--HCLML--SQNHLVPLENFQSG-IIIHIEV   71 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----T--EEEEEETT--EEEEE--ESSCSSSCCCCCSC-EEEEEEC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----C--EEEEEeCC--eEEEE--EcCCCCCcccCCCe-EEEEEEE
Confidence            5789999999999999999999999999875422    1  24454442  22322  22111111122334 4899999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835          101 EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       101 ~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      +|+++++++|+++|+++..++...++|.+. ++|+||+||.|||++.
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           72 EDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             SCHHHHHHHHHHHTCCEEEEEEECTTSCEE-EEEECGGGCEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCceecCCccccCccEE-EEEECCCccEEEEEec
Confidence            999999999999999988777777777554 7999999999999875

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.74  E-value=2.4e-17  Score=129.18  Aligned_cols=129  Identities=30%  Similarity=0.564  Sum_probs=94.4

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEeccccc---------------ccceeEeeccccCcc
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE---------------DQTTVLELTYNYGVT  215 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~~  215 (291)
                      ..++.|+.|.|+|++++.+||+++|||++..+....+..+.+++++.++.               ..+..++|.......
T Consensus        29 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~~  108 (184)
T 2za0_A           29 DFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTE  108 (184)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGG
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCCC
Confidence            45799999999999999999999999998876543333455555553220               013456664322110


Q ss_pred             -----ccc----cCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhH
Q 022835          216 -----EYT----KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       216 -----~~~----~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~  285 (291)
                           .+.    ...+..|++|.|+|++++++++    +++|+++..+|...++  .+++||+|||||+|||++...+-
T Consensus       109 ~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l----~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~~~  181 (184)
T 2za0_A          109 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKIA  181 (184)
T ss_dssp             GCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHH----HHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTTGG
T ss_pred             CCcccccccCCCCCCCeeEEEEEeCCHHHHHHHH----HHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCccc
Confidence                 011    1247789999999999999999    9999999887776443  46799999999999999987653

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.74  E-value=2.2e-17  Score=124.39  Aligned_cols=128  Identities=16%  Similarity=0.202  Sum_probs=90.9

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEeccccc--ccceeEeeccccCccc------cccC--
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE--DQTTVLELTYNYGVTE------YTKG--  220 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~l~~~~~~~~------~~~~--  220 (291)
                      ..+++|+.|.|+|++++.+||+++|||++.......+.+....++..++.  .++..+++........      ...+  
T Consensus         7 ~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~   86 (148)
T 1jc4_A            7 FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGR   86 (148)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCCC
Confidence            35799999999999999999999999998876433333344555654331  1124566654332111      1133  


Q ss_pred             cceeeEEEEecchHHHHHHHHHHHHHhCCeecc-CCccCCCCCceEEEE--ECCCCceEEEecchh
Q 022835          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITR-QPGPIPGLNTKITSF--VDPDGWKTVLVDNED  283 (291)
Q Consensus       221 ~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~-~p~~~~~~~~~~~~~--~DPdG~~ie~~~~~~  283 (291)
                      .+.+|++|.|+|++++++++    +++|+++.. .|...++ +.+++|+  +|||||+|||++.+.
T Consensus        87 ~g~~h~~~~v~d~~~~~~~l----~~~G~~~~~~~p~~~~~-g~~~~~~~~~DPdG~~iel~~~~~  147 (148)
T 1jc4_A           87 AGLHHMAWRVDDIDAVSATL----RERGVQLLYDEPKLGTG-GNRINFMHPKSGKGVLIELTQYPK  147 (148)
T ss_dssp             CEEEEEEEECSCHHHHHHHH----HHHTCCBSCSSCEECSS-SCEEEEBCGGGGTTSCEEEEECCC
T ss_pred             CceEEEEEECCCHHHHHHHH----HHCCCeecCcCcccCCC-ceEEEEEeecCCCcEEEEEEecCC
Confidence            57899999999999999999    999999883 4443233 3466777  999999999998753

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.74  E-value=5.7e-17  Score=121.10  Aligned_cols=118  Identities=19%  Similarity=0.315  Sum_probs=84.5

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceE---EEEEecCCCCcceEEEeeecCCCccccCCCCceEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYS---NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i   96 (291)
                      |+++|+|+.|.|+|++++.+||+++|||++......  ..+.   ..++..++    ..+.+......    +..+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~g~----~~l~l~~~~~~----~~~~~~h~   70 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDT--EQFSLSREKFFLIGD----IWVAIMQGEKL----AERSYNHI   70 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG--STTCCSCEEEEEETT----EEEEEEECCCC----SSCCSCEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC--ccccccceEEEEECC----EEEEEEeCCCC----CCCCeeEE
Confidence            478999999999999999999999999998765331  1111   01444332    23444433211    14578899


Q ss_pred             EEEeC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           97 AIATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~--di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +|.|+  |+++++++|+++|+++..++...+++.. .++|+||+||.|||++..
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           71 AFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGR-SIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCBCCCCC-----CC-EEEEECTTSCEEEEECCC
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCcccCCCCeE-EEEEECCCCCEEEEEeCC
Confidence            99998  9999999999999998876655554444 389999999999999864

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.73  E-value=3.7e-17  Score=121.62  Aligned_cols=119  Identities=19%  Similarity=0.201  Sum_probs=88.2

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCc--ccc-ccCcceeeEEEE
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV--TEY-TKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~~-~~~~~~~h~~f~  229 (291)
                      ++.|+.|.|+|++++.+||+++|||++..+....++.+..+++.  +   +..+.|....+.  ... ..+.+..|++|.
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~--~---~~~l~l~~~~~~~~~~~~~~~~g~~h~~f~   79 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP--G---GLSIVLREHDGGGTDLFDETRPGLDHLSFS   79 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT--T---SCEEEEEEETTCSSSCCCTTSSEEEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc--C---CCEEEEEeCCCCcccCCCCCCCCcceEEEE
Confidence            58999999999999999999999999887654333334445454  2   345666543221  111 234578899999


Q ss_pred             e---cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          230 T---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       230 v---~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      |   +|++++.+++    +++|+++. .|...++  ++.+||+|||||+|||++..+
T Consensus        80 v~~~~d~~~~~~~l----~~~G~~~~-~~~~~~~--g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           80 VESMTDLDVLEERL----AKAGAAFT-PTQELPF--GWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             ESSHHHHHHHHHHH----HHHTCCBC-CCEEETT--EEEEEEECTTCCEEEEEEECT
T ss_pred             eCCHHHHHHHHHHH----HHCCCccc-CccccCC--ceEEEEECCCCCEEEEEEcCC
Confidence            9   7888888888    99999986 4444444  389999999999999998765

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.73  E-value=7.1e-17  Score=119.48  Aligned_cols=119  Identities=20%  Similarity=0.287  Sum_probs=86.2

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceE---EEEEecCCCCcceEEEeeecCCCccccCCCCceEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYS---NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i   96 (291)
                      |+++|+|+.|.|+|++++.+||+++|||++.....  ...+.   ..++..+  +  ..+.+......    +..+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~--~--~~l~l~~~~~~----~~~~~~h~   70 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIA--G--LWICIMEGDSL----QERTYNHI   70 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEET--T--EEEEEEECSSC----CCCCSCEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeC--C--EEEEEecCCCC----CCCCeeEE
Confidence            57899999999999999999999999999875432  11111   0134433  2  23444433211    24577899


Q ss_pred             EEEe--CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           97 AIAT--EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        97 ~~~v--~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      +|.|  +|+++++++|+++|+++..++...+++... ++|+||+||.|||++...
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~-~~~~DPdG~~iel~~~~~  124 (133)
T 2p7o_A           71 AFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGRS-IYFYDFDNHLFELHAGTL  124 (133)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCCE-EEEECSSSCEEEEECSSC
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCCccCCCCeeE-EEEECCCCCEEEEEcCCh
Confidence            9999  599999999999999988876655454443 899999999999998763

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.73  E-value=1e-17  Score=128.09  Aligned_cols=120  Identities=16%  Similarity=0.176  Sum_probs=90.7

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCC--------------CcceeEEEecccccccceeEeeccccCccc
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--------------EYKYTLAMLGYAEEDQTTVLELTYNYGVTE  216 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  216 (291)
                      ..+++|++|.|+|++++.+||+++|||++..+....              +.+...+++..+    +..++|....+...
T Consensus        17 ~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g----~~~leL~~~~~~~~   92 (159)
T 3gm5_A           17 MRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG----PLQLELIEPDENPS   92 (159)
T ss_dssp             GGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEET----TEEEEEEEECSSSC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecC----CEEEEEEEECCCCC
Confidence            457999999999999999999999999977654322              133455555532    35677765433221


Q ss_pred             -c-----ccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCC--CceEEEecc
Q 022835          217 -Y-----TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPD--GWKTVLVDN  281 (291)
Q Consensus       217 -~-----~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPd--G~~ie~~~~  281 (291)
                       .     ..+.|++|++|.|+|+++++++|    +++|+++...+. ..  +.+++||+|||  |++|||+++
T Consensus        93 ~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l----~~~G~~~~~~~~-~~--g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           93 TWREFLDKNGEGIHHIAFVVKDMDRKVEEL----YRKGMKVIQKGD-FE--GGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             HHHHHHHHHCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEE-ET--TEEEEEESCHHHHSSEEEEEEE
T ss_pred             hhHHHhhcCCceEEEEEEEcCCHHHHHHHH----HHCCCcEeeccc-cC--CeeEEEEeccccCcEEEEEEec
Confidence             1     13568999999999999999999    999999876643 22  36899999999  999999985

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.73  E-value=1e-16  Score=117.56  Aligned_cols=118  Identities=15%  Similarity=0.195  Sum_probs=86.3

Q ss_pred             CCcceeEEEEEEe--CCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEE
Q 022835           19 KDKRRFLHAVYRV--GDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        19 ~~~~~i~hv~i~v--~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i   96 (291)
                      +++.+|+||.|.|  +|++++.+||+++|||++..+...... ....++..++  .  .+.+......    ...+..|+
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~--~--~l~l~~~~~~----~~~~~~~~   76 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKK-RGGCWFKCGN--Q--EIHIGVEQNF----NPAKRAHP   76 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGG-GCCEEEEETT--E--EEEEEECTTC----CCCSSSCE
T ss_pred             cccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccC-CCceEEEeCC--E--EEEEEecCCC----CCCCceEE
Confidence            5789999999999  899999999999999998754321100 0124555542  2  3334332211    12467899


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           97 AIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +|.|+|+++++++|+++|+++..++. . +|.+ .++|+||+||.|||+++.
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~-~-~g~~-~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           77 AFYVLKIDEFKQELIKQGIEVIDDHA-R-PDVI-RFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EEEETTHHHHHHHHHHTTCCCEEECS-S-TTEE-EEEEECTTSCEEEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHcCCCccCCCC-C-CCee-EEEEECCCCCEEEEEeCC
Confidence            99999999999999999999877662 2 3444 489999999999999864

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.73  E-value=3.1e-17  Score=121.24  Aligned_cols=119  Identities=23%  Similarity=0.255  Sum_probs=87.0

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCc---cccccCcceeeEE
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV---TEYTKGNAYAQVA  227 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~h~~  227 (291)
                      ..++.|+.|.|+|++++.+||+++|||++..+.   + +.  ..+..+    +..+.+......   .......+..|++
T Consensus         8 ~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---~-~~--~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~   77 (133)
T 3ey7_A            8 ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---A-GR--IALEFG----HQKINLHQLGNEFEPKAQNVRVGSADLC   77 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-TE--EEEEET----TEEEEEEETTSCCSSCCTTCCTTCCEEE
T ss_pred             ecccCEEEEEECCHHHHHHHHHHccCceEEEec---C-Ce--EEEEcC----CEEEEEEcCCCCccccCCCCCCCccEEE
Confidence            457899999999999999999999999988652   1 12  223322    233444332111   1112345789999


Q ss_pred             EEecc-hHHHHHHHHHHHHHhCCeeccCCccCCCC--CceEEEEECCCCceEEEecchh
Q 022835          228 ISTDD-VYKSAEVVNLVTQELGGKITRQPGPIPGL--NTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       228 f~v~d-~~~~~~~l~~~~~~~G~~~~~~p~~~~~~--~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      |.|+| ++++.+++    +++|+++..+|...++.  ..+.+||+|||||+|||++..+
T Consensus        78 ~~v~dd~~~~~~~l----~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           78 FITDTVLSDAMKHV----EDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EECSSCHHHHHHHH----HHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEeCcHHHHHHHHH----HHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            99997 99999999    99999998877654432  2378999999999999999754

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.73  E-value=2.4e-17  Score=125.27  Aligned_cols=122  Identities=21%  Similarity=0.219  Sum_probs=88.7

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecC--------CCcceeEEEecccccccceeEeeccccCccc-----c
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDK--------PEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-----Y  217 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----~  217 (291)
                      ..+++|+.|.|+|++++.+||+++|||++......        ..+..  .++..++   +..+.+.......+     .
T Consensus        17 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~   91 (156)
T 3kol_A           17 LRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKV--ANFITPD---GTILDLFGEPELSPPDPNPE   91 (156)
T ss_dssp             SCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSE--EEEECTT---SCEEEEEECTTCCCSSSSTT
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcE--EEEEeCC---CCEEEEEecCCCCcCCCCCC
Confidence            45899999999999999999999999998763221        11222  3333322   24455544322111     1


Q ss_pred             ccCcceeeEEEEec--chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          218 TKGNAYAQVAISTD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       218 ~~~~~~~h~~f~v~--d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      ....+..|++|.|+  |++++++++    +++|+++..+|...++  ++.+||+|||||+|||++.+.
T Consensus        92 ~~~~~~~h~~~~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           92 KTFTRAYHLAFDIDPQLFDRAVTVI----GENKIAIAHGPVTRPT--GRGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             CCCSSCCEEEEECCGGGHHHHHHHH----HHTTCCEEEEEEEC-C--CEEEEEECTTSCEEEEEECCC
T ss_pred             CCCCceEEEEEEecHHHHHHHHHHH----HHCCCccccCceecCC--ccEEEEECCCCCEEEEEecCC
Confidence            23457899999998  999999999    9999999887776655  469999999999999998764

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.72  E-value=4.7e-17  Score=122.95  Aligned_cols=120  Identities=12%  Similarity=0.081  Sum_probs=84.6

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCcc-ccCCCCceEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS-YDIGTGFGHFAI   98 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~i~~   98 (291)
                      |+++|.||.|.|+|++++.+||+++|||++.....    .  .+++..++ +  ..+.+.......+ .....+..|++|
T Consensus         3 m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~--~~~~~~~~-g--~~l~l~~~~~~~~~~~~~~~~~~l~f   73 (148)
T 3rhe_A            3 MLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----T--FAMFVMKT-G--LRLGLWAQEEIEPKAHQTGGGMELSF   73 (148)
T ss_dssp             ----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----S--EEEEECTT-S--CEEEEEEGGGCSSCCC----CEEEEE
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----C--EEEEEcCC-C--cEEEEecCCcCCccccCCCCeEEEEE
Confidence            57899999999999999999999999999876532    1  34454422 2  2344433222111 122345689999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC
Q 022835           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        99 ~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      .|+|   +++++++|+++|+++..++...++|  ..++|+||+||+|||++..+.
T Consensus        74 ~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~  126 (148)
T 3rhe_A           74 QVNSNEMVDEIHRQWSDKEISIIQPPTQMDFG--YTFVGVDPDEHRLRIFCLKRT  126 (148)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCCEEEEEEEC--
T ss_pred             EcCCHHHHHHHHHHHHhCCCEEEeCCeecCCC--cEEEEECCCCCEEEEEEcChh
Confidence            9987   9999999999999998888877776  348999999999999998754

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.72  E-value=1e-16  Score=118.65  Aligned_cols=116  Identities=17%  Similarity=0.133  Sum_probs=86.8

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      .+.++.||.|.|+|++++.+||+++|||++.....    .+  +.+..++ +  ..+.+....... .....+..|++|.
T Consensus        10 ~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~-~--~~l~l~~~~~~~-~~~~~~~~~~~~~   79 (132)
T 3sk2_A           10 PTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RY--VAFPSSG-D--ALFAIWSGGEEP-VAEIPRFSEIGIM   79 (132)
T ss_dssp             CCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SE--EEEECST-T--CEEEEESSSCCC-CTTSCCCEEEEEE
T ss_pred             CcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CE--EEEEcCC-C--cEEEEEeCCCCC-cCCCCCcceEEEE
Confidence            36799999999999999999999999999865432    12  2333222 2  234444332111 1233467899999


Q ss_pred             eCC---HHHHHHHHHH---cCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835          100 TED---VYKLVENIRA---KGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       100 v~d---i~~~~~~l~~---~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      |+|   +++++++|++   +|+++..+|...++| + .++|+|||||+|||.+.
T Consensus        80 v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g-~-~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           80 LPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG-R-TFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             ESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTE-E-EEEEECTTCCEEEEEEC
T ss_pred             eCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCce-E-EEEEECCCCCEEEEEeC
Confidence            986   9999999999   999998888777777 4 48999999999999875

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.72  E-value=4.7e-17  Score=122.34  Aligned_cols=119  Identities=16%  Similarity=0.233  Sum_probs=87.7

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      |.+.++. +.|.|+|++++++||+++|||++..+...++.......+  +.      +.+......  .....+..|++|
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~--~~------~~l~~~~~~--~~~~~~~~hl~f   71 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQI--ST------ILLIAGSEE--ALKPFRNTQATF   71 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEE--TT------EEEEESCHH--HHGGGGGCCEEE
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEe--cc------EEEecCCcc--cCCCCcceEEEE
Confidence            4467777 999999999999999999999987765444444444333  21      222222110  011124589999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC
Q 022835           99 ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        99 ~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      .|+|+++++++|+++|+++..++...++| + .++|+||+||.|||++..+.
T Consensus        72 ~V~d~d~~~~~l~~~G~~v~~~p~~~~~G-~-~~~~~DPdG~~iel~~~~~~  121 (144)
T 3r6a_A           72 LVDSLDKFKTFLEENGAEIIRGPSKVPTG-R-NMTVRHSDGSVIEYVEHSKI  121 (144)
T ss_dssp             EESCHHHHHHHHHHTTCEEEEEEEEETTE-E-EEEEECTTSCEEEEEEECC-
T ss_pred             EeCCHHHHHHHHHHcCCEEecCCccCCCc-e-EEEEECCCCCEEEEEEcCCc
Confidence            99999999999999999998887777776 3 48999999999999998864

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.72  E-value=5.2e-17  Score=117.82  Aligned_cols=115  Identities=19%  Similarity=0.262  Sum_probs=85.5

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      |.+.++ |+.|.|+|++++.+||+++|||++....   +  . ..++..++ ...+.+.+.....     ...+..|++|
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~---~--~-~~~~~~~~-~~~~~l~l~~~~~-----~~~~~~~~~~   70 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMDH---G--W-IVTHASPL-EAHAQVSFAREGG-----SGTDVPDLSI   70 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC---S--S-EEEEEEEE-EEEEEEEEESSSB-----TTBCCCSEEE
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC---C--E-EEEEecCC-CCcEEEEEEcCCC-----CCCceeEEEE
Confidence            457888 9999999999999999999999987641   1  1 22333321 1123344443211     1235679999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835           99 ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      .|+|+++++++|+++|+++..++...++|.+ .++++||+||.|||++.
T Consensus        71 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           71 EVDNFDEVHARILKAGLPIEYGPVTEAWGVQ-RLFLRDPFGKLINILSH  118 (119)
T ss_dssp             EESCHHHHHHHHHHTTCCCSEEEEECTTSCE-EEEEECTTSCEEEEEEC
T ss_pred             EECCHHHHHHHHHHCCCccccCCccCCCccE-EEEEECCCCCEEEEEec
Confidence            9999999999999999998887777777654 48999999999999985

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.72  E-value=8.2e-17  Score=121.96  Aligned_cols=123  Identities=15%  Similarity=0.199  Sum_probs=89.6

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecC-----------CCcceeEEEecccccccceeEeeccc--cCcc---
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDK-----------PEYKYTLAMLGYAEEDQTTVLELTYN--YGVT---  215 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~l~~~--~~~~---  215 (291)
                      .++.|+.|.|+|++++.+||++ |||++..+...           ++.+...+++..++  .+..++|...  ....   
T Consensus        10 ~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--g~~~l~l~~~~~~~~~~~~   86 (153)
T 1ss4_A           10 LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD--GHSRIELSRFLTPPTIADH   86 (153)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT--SSCEEEEEEEEESCCCCBC
T ss_pred             cceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCC--CCcEEEEEEecCCCCcccc
Confidence            4689999999999999999999 99998765321           11223445555432  1244555432  1111   


Q ss_pred             --ccccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          216 --EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       216 --~~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                        ....+.+.+|++|.|+|++++++++    +++|+++..+|...++ +.+++||+||||++|||++..
T Consensus        87 ~~~~~~~~g~~hl~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           87 RTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHH----HHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEEC
T ss_pred             cCCCCCCCceEEEEEEeCCHHHHHHHH----HHCCCeecCCCcccCC-ceEEEEEECCCCCEEEEEecc
Confidence              0123457789999999999999999    9999999888766554 468899999999999999864

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.72  E-value=6.7e-17  Score=119.62  Aligned_cols=115  Identities=12%  Similarity=0.073  Sum_probs=85.3

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++|||++....+    .+..  +...+   +..+.+...... .....++..|++|.|
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~~--~~~~~---~~~l~l~~~~~~-~~~~~~~~~~~~~~v   80 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYVA--FPSSG---DALFAIWSGGEE-PVAEIPRFSEIGIML   80 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEEE--EECST---TCEEEEESSSCC-CCTTSCCCEEEEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEEE--EEcCC---CcEEEEEeCCCC-CcCCCCCcceEEEEe
Confidence            4689999999999999999999999999876532    2222  22111   244555432211 112234678999999


Q ss_pred             cc---hHHHHHHHHHHHHH---hCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          231 DD---VYKSAEVVNLVTQE---LGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~d---~~~~~~~l~~~~~~---~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      +|   ++++.+++    ++   +|+++..+|...++  ++.+||+|||||+|||+++
T Consensus        81 ~~~~dv~~~~~~l----~~~~~~G~~~~~~p~~~~~--g~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           81 PTGEDVDKLFNEW----TKQKSHQIIVIKEPYTDVF--GRTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             SSHHHHHHHHHHH----HHCSSSCCEEEEEEEEETT--EEEEEEECTTCCEEEEEEC
T ss_pred             CCHHHHHHHHHHH----HhhhcCCCEEeeCCcccCc--eEEEEEECCCCCEEEEEeC
Confidence            87   77777777    99   99999988887766  3899999999999999875

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.72  E-value=1.5e-16  Score=117.20  Aligned_cols=120  Identities=16%  Similarity=0.158  Sum_probs=82.0

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      +...|+||.|.|+|++++.+||++ |||++..... +.+.+  .++... ++..  +.+.....  ......+..+++|.
T Consensus         3 ~~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~~--~~~~~~-~~~~--l~l~~~~~--~~~~~~~~~~l~f~   73 (128)
T 3g12_A            3 LSLLITSITINTSHLQGMLGFYRI-IGFQFTASKV-DKGSE--VHRAVH-NGVE--FSLYSIQN--PQRSQIPSLQLGFQ   73 (128)
T ss_dssp             -CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CC--EEEEEE-TTEE--EEEEECCC--CSSCCCCSEEEEEE
T ss_pred             ccceEEEEEEEcCCHHHHHHHHHH-CCCEEecccC-CCCCE--EEEEeC-CCeE--EEEEECCC--CcCCCCCceEEEEE
Confidence            456899999999999999999999 9999865411 11122  333311 1222  33322211  11222345789999


Q ss_pred             eCCHHHHHHHHHHcCCe-eecCCccCCCCceEEEEEECCCCCEEEEEEcCCC
Q 022835          100 TEDVYKLVENIRAKGGN-VTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       100 v~di~~~~~~l~~~G~~-~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      |+|+++++++|+++|++ +..+|...++|..  ++|+|||||+|+|.+.++.
T Consensus        74 v~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~--~~~~DPdGn~iel~~~~~~  123 (128)
T 3g12_A           74 ITDLEKTVQELVKIPGAMCILDPTDMPDGKK--AIVLDPDGHSIELCELEGH  123 (128)
T ss_dssp             ESCHHHHHHHHTTSTTCEEEEEEEECC-CEE--EEEECTTCCEEEEEC----
T ss_pred             eCCHHHHHHHHHHCCCceeccCceeCCCccE--EEEECCCCCEEEEEEeccc
Confidence            99999999999999999 8777777787754  8899999999999988753

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.71  E-value=3.1e-16  Score=117.09  Aligned_cols=122  Identities=17%  Similarity=0.297  Sum_probs=87.2

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      |...+.||.|.|+|++++.+||+++|||++..+... ...+..+++..++.  .+.+++.......+...+.+..|++|.
T Consensus         8 m~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~hi~~~   84 (139)
T 1twu_A            8 FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSLLVFY   84 (139)
T ss_dssp             CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCEEEEE
T ss_pred             CCcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC--ceEEEEeecCCCCCCCCCCCccEEEEE
Confidence            445678899999999999999999999998765432 23345566665432  334555443222223345577899999


Q ss_pred             eCCH---HHHHHHHHHcCCeeecC--CccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          100 TEDV---YKLVENIRAKGGNVTRE--PGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~di---~~~~~~l~~~G~~~~~~--~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |+|+   ++++++|+++|+.+..+  +.....|    .||+||+||+|||++..
T Consensus        85 v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g----~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           85 VPNAVELAAITSKLKHMGYQEVESENPYWSNGG----VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE----EEEECTTCCEEEEESSC
T ss_pred             eCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC----eEEECCCCCEEEEEEcC
Confidence            9999   99999999999998732  2222222    36999999999999864

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.71  E-value=9.2e-17  Score=121.62  Aligned_cols=119  Identities=23%  Similarity=0.312  Sum_probs=88.3

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCC-----CccccCCCCc
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG-----VTSYDIGTGF   93 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~   93 (291)
                      ||+.+|.|+.|.|+|++++.+||+++|||++....    ..  .+++..+  +.  .+.+.....     ..+...+.+.
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~--~~~~~~~--~~--~l~l~~~~~~~~~~~~~~~~~~~~   70 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRN----PE--IIFYQMN--GF--VLATWLVQNLQEDVGVAVTSRPGS   70 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----SS--EEEEECS--SS--EEEEEEHHHHHHHHSSCCCSSCCS
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----CC--EEEEEcC--CE--EEEEEeccccccccCCCCCCCCCe
Confidence            46789999999999999999999999999987653    11  3455543  22  233433211     0011124567


Q ss_pred             eEEEEEe---CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           94 GHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        94 ~~i~~~v---~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|++|.|   +|+++++++|+++|+++..++...++|.+ .++|+||+||.|||++..
T Consensus        71 ~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  127 (150)
T 3bqx_A           71 MALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGL-RGYVADPDGHIWEIAFNP  127 (150)
T ss_dssp             CEEEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSE-EEEEECTTCCEEEEEECT
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCE-EEEEECCCCCEEEEEeCC
Confidence            8999999   89999999999999998887777776654 489999999999999875

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.71  E-value=3.4e-16  Score=116.49  Aligned_cols=119  Identities=18%  Similarity=0.197  Sum_probs=86.3

Q ss_pred             EEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecC-CCccccCCCCce-EEEEEeCC
Q 022835           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY-GVTSYDIGTGFG-HFAIATED  102 (291)
Q Consensus        25 ~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~-~i~~~v~d  102 (291)
                      ..+.|.|+|++++.+||+++|||++......+ +....+.+..++  ..  +.+.... .......+.... |++|.|+|
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~--~~--l~l~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGG--GI--VMVRRTGEPYTVSCAGGHTCKQVIVWVSD   78 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSS--SE--EEEEETTCCSSCEECCCCCCCEEEEEESC
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCC--eE--EEEEecCCCcCccCCCCCcEEEEEEEeCC
Confidence            47899999999999999999999998765443 333344454432  22  3333221 111111222334 99999999


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835          103 VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       103 i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      +++++++|+++|+++..++...++|.+. ++|+||+||.|||++...
T Consensus        79 v~~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           79 VDEHFMRSTAAGADIVQPLQDKPWGLRQ-YLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEETTTEEE-EEEECSSSCEEEEEECC-
T ss_pred             HHHHHHHHHHcCCeeccCccccCCCcEE-EEEECCCCCEEEEEEEcC
Confidence            9999999999999998888887877654 899999999999999864

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.71  E-value=1.2e-16  Score=120.47  Aligned_cols=122  Identities=22%  Similarity=0.351  Sum_probs=85.7

Q ss_pred             CCCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecC-CCccccCCCCceE
Q 022835           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY-GVTSYDIGTGFGH   95 (291)
Q Consensus        17 ~~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~   95 (291)
                      +.+++.+|+||.|.|+|++++.+||+++|||++....   +.   ..++..++  ..+.+...... .........|..|
T Consensus        21 ~~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~---~~~l~~g~--~~l~l~~~~~~~~~~~~~~~~g~~~   92 (147)
T 3zw5_A           21 QSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---ED---RKALCFGD--QKFNLHEVGKEFEPKAAHPVPGSLD   92 (147)
T ss_dssp             HHTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---TT---EEEEEETT--EEEEEEETTSCCSSCCSSCCTTCCE
T ss_pred             cceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---CC---ceEEEECC--cEEEEEEcCCCcCcccCCCCCCCce
Confidence            4467899999999999999999999999999997542   11   23444443  22222221111 1111224457789


Q ss_pred             EEEEeC-CHHHHHHHHHHcCCeeecCCccCCC--CceEEEEEECCCCCEEEEEE
Q 022835           96 FAIATE-DVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        96 i~~~v~-di~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dp~G~~iel~~  146 (291)
                      ++|.+. |+++++++|+++|+++...|....+  |....+||+|||||+|||.+
T Consensus        93 ~~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           93 ICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             EEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             EEEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            999885 9999999999999998765544332  22335899999999999986

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.71  E-value=5.5e-16  Score=115.09  Aligned_cols=113  Identities=23%  Similarity=0.356  Sum_probs=84.9

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      |+++|+||.|.|+|++++.+||+++|||++.....  .    ..++..++  .  .+.+......  .....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~~~~--~--~l~l~~~~~~--~~~~~~~~h~~~~   68 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q----GAYLELGS--L--WLCLSREPQY--GGPAADYTHYAFG   68 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEEETT--E--EEEEEECTTC--CCCCSSSCEEEEE
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C----ceEEecCC--E--EEEEEeCCCC--CCCCCCcceEEEE
Confidence            57899999999999999999999999999876532  2    24455432  2  2344333211  1234567899999


Q ss_pred             eC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          100 TE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~--di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |+  |+++++++|+++|+++..++..  ++ . .++++||+||.|||++..
T Consensus        69 v~~~d~~~~~~~l~~~G~~~~~~~~~--~~-~-~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           69 IAAADFARFAAQLRAHGVREWKQNRS--EG-D-SFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCS--SS-C-EEEEECTTCCEEEEESCC
T ss_pred             ccHHHHHHHHHHHHHCCCceecCCCC--Ce-E-EEEEECCCCCEEEEEECC
Confidence            97  9999999999999998876543  33 3 389999999999999765

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.71  E-value=7.4e-17  Score=122.34  Aligned_cols=119  Identities=18%  Similarity=0.236  Sum_probs=85.7

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCc---cccccCcceeeEE
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV---TEYTKGNAYAQVA  227 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~h~~  227 (291)
                      ..++.|+.|.|.|++++.+||+++|||++..+.   + +..  ++..+    +..+.+......   .......+..|++
T Consensus        21 i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~-~~~--~l~~~----~~~l~l~~~~~~~~~~~~~~~~g~~hi~   90 (152)
T 3huh_A           21 IDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q-NRK--ALIFG----AQKINLHQQEMEFEPKASRPTPGSADLC   90 (152)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---T-TEE--EEEET----TEEEEEEETTBCCSSCCSSCCTTCCEEE
T ss_pred             cceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C-CeE--EEEeC----CeEEEEeccCCcCCCcCcCCCCCccEEE
Confidence            347999999999999999999999999988762   1 122  23322    233444332111   1112345788999


Q ss_pred             EEec-chHHHHHHHHHHHHHhCCeeccCCccCCCCC--ceEEEEECCCCceEEEecchh
Q 022835          228 ISTD-DVYKSAEVVNLVTQELGGKITRQPGPIPGLN--TKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       228 f~v~-d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~--~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      |.+. |++++.+++    +++|+++..+|...++..  .+.+||+|||||+|||++..+
T Consensus        91 f~~~~dl~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  145 (152)
T 3huh_A           91 FITSTPINDVVSEI----LQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVE  145 (152)
T ss_dssp             EEESSCHHHHHHHH----HHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC--
T ss_pred             EEecCCHHHHHHHH----HHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEeccc
Confidence            9997 999999999    999999988776544322  488999999999999998764

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.71  E-value=9.1e-17  Score=118.32  Aligned_cols=117  Identities=15%  Similarity=0.224  Sum_probs=80.0

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecc
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d  232 (291)
                      .+.|+.|.|+|++++.+||++ |||++..... +.+.+..+...  +   +..+.+....+  ......+..|++|.|+|
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~~~~~~~~--~---~~~l~l~~~~~--~~~~~~~~~~l~f~v~d   76 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRI-IGFQFTASKV-DKGSEVHRAVH--N---GVEFSLYSIQN--PQRSQIPSLQLGFQITD   76 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CCEEEEEE--T---TEEEEEEECCC--CSSCCCCSEEEEEEESC
T ss_pred             eEEEEEEEcCCHHHHHHHHHH-CCCEEecccC-CCCCEEEEEeC--C---CeEEEEEECCC--CcCCCCCceEEEEEeCC
Confidence            589999999999999999999 9999876421 11123222211  1   23444422111  11222355789999999


Q ss_pred             hHHHHHHHHHHHHHhCCe-eccCCccCCCCCceEEEEECCCCceEEEecchhh
Q 022835          233 VYKSAEVVNLVTQELGGK-ITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~-~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                      ++++++++    +++|++ +..+|...++ +.+ ++|+|||||+|||.+.++.
T Consensus        77 vd~~~~~l----~~~G~~~~~~~p~~~~~-G~~-~~~~DPdGn~iel~~~~~~  123 (128)
T 3g12_A           77 LEKTVQEL----VKIPGAMCILDPTDMPD-GKK-AIVLDPDGHSIELCELEGH  123 (128)
T ss_dssp             HHHHHHHH----TTSTTCEEEEEEEECC--CEE-EEEECTTCCEEEEEC----
T ss_pred             HHHHHHHH----HHCCCceeccCceeCCC-ccE-EEEECCCCCEEEEEEeccc
Confidence            99999999    999999 8877777665 344 9999999999999998864

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.70  E-value=5.9e-16  Score=115.81  Aligned_cols=115  Identities=22%  Similarity=0.354  Sum_probs=85.4

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCC-CccccCCCCceEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG-VTSYDIGTGFGHFAI   98 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~i~~   98 (291)
                      |+.+|+||.|.|+|++++.+||+++|||++.....  .    ..++..++  .  .+.+..... ........+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~~--~--~l~l~~~~~~~~~~~~~~~~~hi~~   70 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T----GAYLTCGD--L--WVCLSYDEARQYVPPQESDYTHYAF   70 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T----EEEEEETT--E--EEEEEECTTCCCCCGGGSCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C----cEEEEECC--E--EEEEEECCCCCCCCCCCCCceEEEE
Confidence            57899999999999999999999999999976542  1    24455432  2  233433221 111223457889999


Q ss_pred             EeC--CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           99 ATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~--di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+  |+++++++|+++|+++..++..   +.. .++|+||+||.|||++..
T Consensus        71 ~v~~~d~~~~~~~l~~~G~~~~~~~~~---~~~-~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           71 TVAEEDFEPLSQRLEQAGVTIWKQNKS---EGA-SFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             ECCHHHHHHHHHHHHHTTCCEEECCCS---SSE-EEEEECTTCCEEEEEECC
T ss_pred             EeCHHHHHHHHHHHHHCCCeEeccCCC---cee-EEEEECCCCCEEEEEECc
Confidence            996  9999999999999998876542   333 489999999999999875

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.70  E-value=1.3e-16  Score=120.01  Aligned_cols=117  Identities=15%  Similarity=0.193  Sum_probs=87.6

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccc-cCCCCceEEEEE
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY-DIGTGFGHFAIA   99 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~i~~~   99 (291)
                      ++++.||.|.|+|++++.+||+++|||++.....  .    ..++..++ .  ..+.+.......+. ..+.+..|++|.
T Consensus        23 m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~~~~hl~f~   93 (144)
T 2kjz_A           23 MTHPDFTILYVDNPPASTQFYKALLGVDPVESSP--T----FSLFVLAN-G--MKLGLWSRHTVEPKASVTGGGGELAFR   93 (144)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET--T----EEEEECTT-S--CEEEEEETTSCSSCCCCSSSSCEEEEE
T ss_pred             cCceeEEEEEeCCHHHHHHHHHHccCCEeccCCC--C----eEEEEcCC-C--cEEEEEeCCCCCCccCCCCCceEEEEE
Confidence            4599999999999999999999999999876541  1    24454443 2  23444433222221 233578899999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          100 TE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |+   |+++++++|+++|+++..++...++| + .++|+||+|+.|||+++.
T Consensus        94 v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~-~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           94 VENDAQVDETFAGWKASGVAMLQQPAKMEFG-Y-TFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCCCSCCEEETTE-E-EEEECCTTCCEEEEEEEC
T ss_pred             eCCHHHHHHHHHHHHHCCCeEecCceecCCc-e-EEEEECCCCCEEEEEecC
Confidence            97   58999999999999988887777766 3 489999999999999864

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.70  E-value=5e-16  Score=115.22  Aligned_cols=119  Identities=19%  Similarity=0.241  Sum_probs=84.0

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      ..++|+||.|.|+|++++.+||+++|||++.....    .  ...+..+.  ..+.+....... .+  ...+..|++|.
T Consensus         6 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~--~~~~~~~g--~~~~l~~~~~~~-~~--~~~~~~h~~~~   74 (135)
T 3rri_A            6 NPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----D--RITLDFFG--DQLVCHLSDRWD-RE--VSMYPRHFGIT   74 (135)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----T--EEEEEETT--EEEEEEECSCSC-SS--CCSSSCEEEEE
T ss_pred             CCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----C--cEEEEEeC--CEEEEEEcCccc-cc--CCCCCCeEEEE
Confidence            35789999999999999999999999999965532    1  23333322  223333322211 11  23456799998


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCccCC---CCceEEEEEECCCCCEEEEEEcCC
Q 022835          100 TE---DVYKLVENIRAKGGNVTREPGPLK---GGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       100 v~---di~~~~~~l~~~G~~~~~~~~~~~---~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      +.   |+++++++|+++|+++..+|....   .+....+||+||+||.|||.+..+
T Consensus        75 ~~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~  130 (135)
T 3rri_A           75 FRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFD  130 (135)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESS
T ss_pred             EcChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECC
Confidence            85   599999999999999876665431   223345899999999999998753

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.70  E-value=1.7e-16  Score=118.92  Aligned_cols=113  Identities=14%  Similarity=0.230  Sum_probs=84.8

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++|||++..+..  +.....+.++  .  .+..+.+....      ...+..|++|.|
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~--~--~~~~l~l~~~~------~~~~~~h~~~~v   93 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARRWNFLWVS--G--RAGMVVLQEEK------ENWQQQHFSFRV   93 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTTEEEEEET--T--TTEEEEEEECC------SSCCCCEEEEEE
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCcEEEEEec--C--CCcEEEEeccC------CCCCCceEEEEE
Confidence            4579999999999999999999999999887642  2223333333  2  24556665431      123678999999


Q ss_pred             c--chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          231 D--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       231 ~--d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      +  |++++.++|    +++|+++. .|...++++.+.+||+|||||+|||++
T Consensus        94 ~~~dld~~~~~l----~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           94 EKSEIEPLKKAL----ESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             CGGGHHHHHHHH----HHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             eHHHHHHHHHHH----HHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence            7  899999999    99999988 444444434689999999999999985

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.70  E-value=1.9e-16  Score=118.28  Aligned_cols=115  Identities=19%  Similarity=0.259  Sum_probs=82.4

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeE---EEecccccccceeEeeccccCccccccCcceeeEEEE
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTL---AMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~  229 (291)
                      ++.|+.|.|+|++++.+||+++|||++......  ..+..   .++..+    +..+.+......   + ..+..|++|.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~g----~~~l~l~~~~~~---~-~~~~~h~~~~   73 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDT--EQFSLSREKFFLIG----DIWVAIMQGEKL---A-ERSYNHIAFK   73 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG--STTCCSCEEEEEET----TEEEEEEECCCC---S-SCCSCEEEEE
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC--ccccccceEEEEEC----CEEEEEEeCCCC---C-CCCeeEEEEE
Confidence            589999999999999999999999998765321  11110   022221    245555432211   1 3478999999


Q ss_pred             ec--chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          230 TD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       230 v~--d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      |+  |++++.+++    +++|+++..+|...++ +.+.+||+|||||+|||++.+
T Consensus        74 v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           74 IDDADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             CCGGGHHHHHHHH----HHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             cCHHHHHHHHHHH----HHCCCcccCCcccCCC-CeEEEEEECCCCCEEEEEeCC
Confidence            99  999999999    9999999877665543 368899999999999999864

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.70  E-value=9.6e-17  Score=121.26  Aligned_cols=122  Identities=14%  Similarity=0.112  Sum_probs=82.9

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc-cccCcceeeEEEEe
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~f~v  230 (291)
                      .++.|+.|.|+|++++.+||+++|||++....+    .+.  .+..++   +..+.+.......+ .....+..|++|.|
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~~--~~~~~~---g~~l~l~~~~~~~~~~~~~~~~~~l~f~v   75 (148)
T 3rhe_A            5 SDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----TFA--MFVMKT---GLRLGLWAQEEIEPKAHQTGGGMELSFQV   75 (148)
T ss_dssp             --CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----SEE--EEECTT---SCEEEEEEGGGCSSCCC----CEEEEEEC
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----CEE--EEEcCC---CcEEEEecCCcCCccccCCCCeEEEEEEc
Confidence            478999999999999999999999999876531    222  333212   24444432221111 11234678999999


Q ss_pred             cc---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhHHhh
Q 022835          231 DD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKEL  288 (291)
Q Consensus       231 ~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~~~~  288 (291)
                      +|   ++++.+++    +++|+++..+|...++  ++.+||+|||||+|||++..+-..+.
T Consensus        76 ~d~~dvd~~~~~l----~~~G~~i~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~~a~~~  130 (148)
T 3rhe_A           76 NSNEMVDEIHRQW----SDKEISIIQPPTQMDF--GYTFVGVDPDEHRLRIFCLKRTAENL  130 (148)
T ss_dssp             SCHHHHHHHHHHH----HHTTCCEEEEEEEETT--EEEEEEECTTCCEEEEEEEC------
T ss_pred             CCHHHHHHHHHHH----HhCCCEEEeCCeecCC--CcEEEEECCCCCEEEEEEcChhHhhh
Confidence            87   77777777    9999999888887776  38899999999999999987765544

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.70  E-value=9e-17  Score=120.80  Aligned_cols=111  Identities=24%  Similarity=0.308  Sum_probs=84.1

Q ss_pred             EeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHHH
Q 022835          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKS  236 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~~  236 (291)
                      +.|.|+|++++++||+++|||++..+...++.+..+..++      .  +.+.....  ....+.+..|++|.|+|++++
T Consensus        10 i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~------~--~~l~~~~~--~~~~~~~~~hl~f~V~d~d~~   79 (144)
T 3r6a_A           10 SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS------T--ILLIAGSE--EALKPFRNTQATFLVDSLDKF   79 (144)
T ss_dssp             EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET------T--EEEEESCH--HHHGGGGGCCEEEEESCHHHH
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec------c--EEEecCCc--ccCCCCcceEEEEEeCCHHHH
Confidence            8899999999999999999999877654333334444333      1  22322211  111223568999999999999


Q ss_pred             HHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          237 AEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       237 ~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      .+++    +++|+++..+|...++  ++.+||+|||||+|||++..+
T Consensus        80 ~~~l----~~~G~~v~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~  120 (144)
T 3r6a_A           80 KTFL----EENGAEIIRGPSKVPT--GRNMTVRHSDGSVIEYVEHSK  120 (144)
T ss_dssp             HHHH----HHTTCEEEEEEEEETT--EEEEEEECTTSCEEEEEEECC
T ss_pred             HHHH----HHcCCEEecCCccCCC--ceEEEEECCCCCEEEEEEcCC
Confidence            9999    9999999888877766  388999999999999999875

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.70  E-value=1.3e-16  Score=115.54  Aligned_cols=114  Identities=20%  Similarity=0.127  Sum_probs=82.0

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++|||++.....    ++  ..+..++    ..+.+......+....+.+ .|++|.|+
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~--~~~~~~~----~~l~l~~~~~~~~~~~~~~-~~~~~~v~   72 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIGS----HCLMLSQNHLVPLENFQSG-IIIHIEVE   72 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEETT----EEEEEESSCSSSCCCCCSC-EEEEEECS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----CE--EEEEeCC----eEEEEEcCCCCCcccCCCe-EEEEEEEC
Confidence            468999999999999999999999999875321    12  2233222    2232222111111112233 58999999


Q ss_pred             chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      |++++.+++    +++|+++..+|...++ +.+.+||+|||||+|||++.
T Consensus        73 d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           73 DVDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             CHHHHHHHH----HHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHH----HHCCCceecCCccccC-ccEEEEEECCCccEEEEEec
Confidence            999999999    9999999888876665 35889999999999999875

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.70  E-value=8.3e-17  Score=123.26  Aligned_cols=119  Identities=20%  Similarity=0.263  Sum_probs=86.5

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeee--cC-C-----CccccCC
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY--NY-G-----VTSYDIG   90 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~--~~-~-----~~~~~~~   90 (291)
                      +++.+|.||.|.|+|++++.+||+++|||++......     ..+++..++  ..  +.+..  .. .     ..+...+
T Consensus         4 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~--~~--~~l~~~~~~~~~~~~~~~~~~~~   74 (160)
T 3r4q_A            4 KPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGR--QM--LLLFDPQESSRADANNPIPRHGA   74 (160)
T ss_dssp             CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETT--EE--EEEECHHHHTCCCTTCCSCCCEE
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCC--EE--EEEEecCCccCccccCCCCcCCC
Confidence            5689999999999999999999999999999876442     134554432  22  22222  11 0     1111123


Q ss_pred             CCceEEEEEe---CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           91 TGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        91 ~~~~~i~~~v---~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+.|++|.|   +|+++++++|+++|+++..++.. ++|.+ .++|+||+||+|||+++.
T Consensus        75 ~g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~-~~g~~-~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           75 VGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRW-PNGSY-SVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             EEECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEEC-TTSCE-EEEEECTTCCEEEEEEGG
T ss_pred             cceeEEEEEeCCHHHHHHHHHHHHHCCCEEeccccc-cCCcE-EEEEECCCCCEEEEEeCC
Confidence            4678999999   89999999999999998754432 33444 489999999999999976

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.70  E-value=2.2e-16  Score=117.73  Aligned_cols=120  Identities=18%  Similarity=0.151  Sum_probs=87.2

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecC------CCccccCCCCc
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY------GVTSYDIGTGF   93 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~------~~~~~~~~~~~   93 (291)
                      |++++.|+.|.|+|++++.+||++ |||++.....  ...  ...+..+ ++.  .+.+....      .......+.+.
T Consensus         1 M~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~--~~~~~~~-~~~--~l~l~~~~~~~~~~~~~~~~~~~~~   72 (138)
T 2a4x_A            1 MSARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAP--HTEAVLD-GGI--RLAWDTVETVRSYDPEWQAPTGGHR   72 (138)
T ss_dssp             -CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCS--EEEEECT-TSC--EEEEEEHHHHHHHCTTCCCCBSSCS
T ss_pred             CcceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCc--eEEEEcC-CCe--EEEEecCccchhhCcccCCCCCCCe
Confidence            467999999999999999999999 9999864322  111  2333332 222  23333311      01111234578


Q ss_pred             eEEEEEeC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           94 GHFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        94 ~~i~~~v~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|++|.|+   |+++++++|+++|+++..++...++|.+ .++|+||+||.|||++..
T Consensus        73 ~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           73 FAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQR-YAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEE-EEEEECTTCCEEEEEEEC
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcE-EEEEECCCCCEEEEEeCC
Confidence            89999999   9999999999999998887777777644 489999999999999987

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.70  E-value=3.4e-16  Score=116.55  Aligned_cols=121  Identities=16%  Similarity=0.083  Sum_probs=86.8

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc-cccCccee-eEEEEe
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYA-QVAIST  230 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~-h~~f~v  230 (291)
                      ...++.|.|+|++++.+||+++|||++..+.... +....+.+..+    +..+.+........ ...+.... |++|.|
T Consensus         2 ~~~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~v   76 (137)
T 3itw_A            2 SHMVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG----GGIVMVRRTGEPYTVSCAGGHTCKQVIVWV   76 (137)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS----SSEEEEEETTCCSSCEECCCCCCCEEEEEE
T ss_pred             CeEEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC----CeEEEEEecCCCcCccCCCCCcEEEEEEEe
Confidence            3567899999999999999999999988765433 33334444432    23344432211100 11222334 999999


Q ss_pred             cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      +|++++++++    +++|+++..+|...++ +.+.+||+|||||+|||++..+
T Consensus        77 ~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           77 SDVDEHFMRS----TAAGADIVQPLQDKPW-GLRQYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             SCHHHHHHHH----HHTTCEEEEEEEEETT-TEEEEEEECSSSCEEEEEECC-
T ss_pred             CCHHHHHHHH----HHcCCeeccCccccCC-CcEEEEEECCCCCEEEEEEEcC
Confidence            9999999999    9999999888877765 4589999999999999998743

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.69  E-value=2.7e-16  Score=116.34  Aligned_cols=116  Identities=16%  Similarity=0.262  Sum_probs=83.6

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeE---EEecccccccceeEeeccccCccccccCcceeeEEE
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTL---AMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f  228 (291)
                      .++.|+.|.|+|++++.+||+++|||++.....  +..+..   .++..+    +..+.+......    ...+..|++|
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~----~~~l~l~~~~~~----~~~~~~h~~~   72 (133)
T 2p7o_A            3 SGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIA----GLWICIMEGDSL----QERTYNHIAF   72 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEET----TEEEEEEECSSC----CCCCSCEEEE
T ss_pred             ceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeC----CEEEEEecCCCC----CCCCeeEEEE
Confidence            468999999999999999999999999876432  111110   022221    244555432211    1457799999


Q ss_pred             Ee--cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          229 ST--DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       229 ~v--~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      .|  +|++++.+++    +++|+++..+|...++ +++.+||+|||||.|||++..
T Consensus        73 ~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           73 QIQSEEVDEYTERI----KALGVEMKPERPRVQG-EGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             ECCGGGHHHHHHHH----HHHTCCEECCCCCCTT-CCCEEEEECSSSCEEEEECSS
T ss_pred             EcCHHHHHHHHHHH----HHCCCcccCCCccCCC-CeeEEEEECCCCCEEEEEcCC
Confidence            99  4999999999    9999999888776544 358899999999999999875

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.69  E-value=1.8e-16  Score=119.74  Aligned_cols=115  Identities=21%  Similarity=0.305  Sum_probs=84.4

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceE--------EEeeecCCCccccCCC
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFV--------VELTYNYGVTSYDIGT   91 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--------l~~~~~~~~~~~~~~~   91 (291)
                      |..++.|+.|.|+|++++.+||+++|||++...   ++..  ..++..++....+.        ..+....      ...
T Consensus        22 M~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~--~~~~~~~~~~~~l~~~~~~~~~~~l~~~~------~~~   90 (148)
T 2r6u_A           22 MTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMD--YSMVTTGPVGESGMPDEPGYINGGMMQRG------EVT   90 (148)
T ss_dssp             TCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTT--EEEEECSCBCTTSSBCSSSCBCEEEEESS------SSC
T ss_pred             cCCceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCC--EEEEEeCCcceeecccCCcccccceeecC------CCC
Confidence            457999999999999999999999999998763   1222  34455443322111        1111110      113


Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeeecCCccCC-CCceEEEEEECCCCCEEEEEEcC
Q 022835           92 GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK-GGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        92 ~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +. |++|.|+|+++++++|+++|+++..++...+ +|  ..++|+||+|++|||++..
T Consensus        91 g~-~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           91 TP-VVTVDVESIESALERIESLGGKTVTGRTPVGNMG--FAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             SC-EEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTE--EEEEEECTTSCEEEEEEEC
T ss_pred             eE-EEEEEcCCHHHHHHHHHHcCCeEecCCeecCCCE--EEEEEECCCCCEEEEEecC
Confidence            44 9999999999999999999999887776666 44  3489999999999999875

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.69  E-value=2.3e-16  Score=118.55  Aligned_cols=117  Identities=17%  Similarity=0.157  Sum_probs=85.6

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCcccc-ccCcceeeEEEE
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY-TKGNAYAQVAIS  229 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~~~~h~~f~  229 (291)
                      +.++.|+.|.|+|++++.+||+++|||++..+..    .+..  +..++   +..+.+.......+. ..+.+..|++|.
T Consensus        23 m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~--~~~~~---~~~l~l~~~~~~~~~~~~~~~~~hl~f~   93 (144)
T 2kjz_A           23 MTHPDFTILYVDNPPASTQFYKALLGVDPVESSP----TFSL--FVLAN---GMKLGLWSRHTVEPKASVTGGGGELAFR   93 (144)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET----TEEE--EECTT---SCEEEEEETTSCSSCCCCSSSSCEEEEE
T ss_pred             cCceeEEEEEeCCHHHHHHHHHHccCCEeccCCC----CeEE--EEcCC---CcEEEEEeCCCCCCccCCCCCceEEEEE
Confidence            4589999999999999999999999999876541    2322  33222   244555432221111 223578999999


Q ss_pred             ecc---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          230 TDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       230 v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      |+|   ++++.++|    +++|+++..+|...++  ++.+||+|||||.|||++++
T Consensus        94 v~d~~dv~~~~~~l----~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           94 VENDAQVDETFAGW----KASGVAMLQQPAKMEF--GYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             CSSHHHHHHHHHHH----HHTTCCCCSCCEEETT--EEEEEECCTTCCEEEEEEEC
T ss_pred             eCCHHHHHHHHHHH----HHCCCeEecCceecCC--ceEEEEECCCCCEEEEEecC
Confidence            984   67777777    9999999888877665  48899999999999999864

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.69  E-value=8.1e-16  Score=112.50  Aligned_cols=113  Identities=12%  Similarity=0.075  Sum_probs=84.4

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      +.....|+.|.|+|++++.+||+++|||++...    ...  ..++..+  +.  .+.+......    ...+..|++|.
T Consensus         2 ~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~----~~~--~~~~~~~--~~--~l~l~~~~~~----~~~~~~~~~~~   67 (124)
T 1xrk_A            2 AKLTSAVPVLTARDVAEAVEFWTDRLGFSRVFV----EDD--FAGVVRD--DV--TLFISAVQDQ----VVPDNTQAWVW   67 (124)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEE----CSS--EEEEEET--TE--EEEEEECSCT----TTGGGCEEEEE
T ss_pred             CcccceeEEEEcCCHHHHHHHHHHccCceEEec----CCC--EEEEEEC--CE--EEEEEcCCCC----CCCCceEEEEE
Confidence            345678999999999999999999999999765    122  2344433  22  2334332211    11234699999


Q ss_pred             eCCHHHHHHHHHHc------CC--eeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          100 TEDVYKLVENIRAK------GG--NVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~di~~~~~~l~~~------G~--~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |+|+++++++|+++      |+  ++..++...++| + .++++||+||.|||.+..
T Consensus        68 v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~-~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           68 VRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG-R-EFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             EECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTE-E-EEEEECTTCCEEEEEEC-
T ss_pred             ECCHHHHHHHHHHhcccccCCccccccCCceecCCC-C-EEEEECCCCCEEEEEEec
Confidence            99999999999999      99  888888777776 4 489999999999999875

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.69  E-value=2e-16  Score=118.15  Aligned_cols=119  Identities=20%  Similarity=0.335  Sum_probs=83.4

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecc
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d  232 (291)
                      ...|+.+.|+|++++.+||+++|||++..+... ++++..++++.++  ....+++....+..+...+.+..|++|.|+|
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d   87 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPH--ADYHLEFTQYEGGSTAPVPHPDSLLVFYVPN   87 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSS--SSEEEEEEEETTCCCCCCCCTTCEEEEECCC
T ss_pred             ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCC--CceEEEEeecCCCCCCCCCCCccEEEEEeCC
Confidence            467888999999999999999999998765432 2334556666433  2344666543322222334577899999999


Q ss_pred             h---HHHHHHHHHHHHHhCCeecc--CCccCCCCCceEEEEECCCCceEEEecch
Q 022835          233 V---YKSAEVVNLVTQELGGKITR--QPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       233 ~---~~~~~~l~~~~~~~G~~~~~--~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      +   ++++++|    +++|+++..  .|.....  +  .||+|||||+|||++..
T Consensus        88 ~~~l~~~~~~l----~~~G~~~~~~~~~~~~~~--g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           88 AVELAAITSKL----KHMGYQEVESENPYWSNG--G--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             HHHHHHHHHHH----HHTTCCEECCSSHHHHSS--E--EEEECTTCCEEEEESSC
T ss_pred             cchHHHHHHHH----HHcCCcCcCCCCcccCCC--C--eEEECCCCCEEEEEEcC
Confidence            8   7788888    999999873  3222222  2  27999999999999863

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.69  E-value=2.1e-15  Score=119.54  Aligned_cols=209  Identities=12%  Similarity=0.044  Sum_probs=130.2

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEE---EEE
Q 022835           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF---AIA   99 (291)
Q Consensus        23 ~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i---~~~   99 (291)
                      .+.+..|.|+|.+++.+||+++|||++..+..      ..+.++.+..  ...+.+...+.... ..-.|+.|+   ++.
T Consensus        10 ~~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~--~~~L~lEEsp~~~~-~~~~Glkh~a~i~i~   80 (244)
T 3e0r_A           10 VRIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTG--LEKLVLEEAPSMRT-RKVEGRKKLARLIVK   80 (244)
T ss_dssp             EEEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTC--CEEEEEEECCTTTC-BCCCSSCSEEEEEEE
T ss_pred             EEEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCC--cceEEEEeCCCccc-ccccccceeeeEEEE
Confidence            45678999999999999999999999987755      2566665322  22233333222211 223577777   599


Q ss_pred             eCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC----------------------CCCceeE
Q 022835          100 TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT----------------------PEPLCQV  157 (291)
Q Consensus       100 v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~----------------------~~~~~hv  157 (291)
                      |++.+++..-|.. +..+... .....| + .+|+.||+||.||+....+.                      ...+ |+
T Consensus        81 vp~~~el~~lL~~-~~~~~~~-~~gdhg-y-A~yl~dPEGn~ieiyae~d~~~l~~v~~~~~l~~~~~~~gLs~fti-~I  155 (244)
T 3e0r_A           81 VENPLEIEGILSK-TDSIHRL-YKGQNG-Y-AFEIFSPEDDLILIHAEDDIASLVEVGEKPEFQTDLASISLSKFEI-SM  155 (244)
T ss_dssp             ESSHHHHHHHHTT-CSCCSEE-EECSSS-E-EEEEECTTCCEEEEECCSCGGGCEECSSCCCCCCCCSCCCCSSEEE-EE
T ss_pred             cCCHHHHHHHHhc-ccccccc-cccCCc-E-EEEEECCCCCeEEEEEcCCHHHhhcccchhhccccccccCCCCcEE-EE
Confidence            9998887666554 5543211 122223 2 48999999999999875531                      1237 99


Q ss_pred             eeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHHHH
Q 022835          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~~~  237 (291)
                      .|+|+|.+++  ||.+ +|+.           ..+.+....    +..+..       +....-++-.+.|.|+  +..+
T Consensus       156 ~LnV~d~~~s--Fy~~-~~~~-----------~~~~F~~a~----G~dl~~-------~~~~t~gLe~l~~~v~--~~dl  208 (244)
T 3e0r_A          156 ELHLPTDIES--FLES-SEIG-----------ASLDFIPAQ----GQDLTV-------DNTVTWDLSMLKFLVN--ELDI  208 (244)
T ss_dssp             EEEECTTCCC--SCCH-HHHT-----------TTEEEEECC----CTTTTC-------CTTSBSSEEEEEEEES--SCCH
T ss_pred             EEEcCchHHH--Hhhc-cCCc-----------ccEEEEccc----CCCCCC-------CCCCccCceEEEEEeC--HHHH
Confidence            9999999998  9976 4441           122333311    111101       1112237788888884  4444


Q ss_pred             HHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          238 EVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      +.+..++++.|+.+ . .      ...++.+.||+|+.|+|.+
T Consensus       209 ~~l~~~L~~~g~~i-d-k------k~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          209 ASLRQKFESTEYFI-P-K------SEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             HHHHHHTTTSCEEC-C-T------TCCEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHhCCceE-c-c------cCCEEEEECCCCCEEEEEE
Confidence            44444448777632 1 1      2467889999999999975

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.69  E-value=1.9e-16  Score=116.12  Aligned_cols=115  Identities=12%  Similarity=0.145  Sum_probs=83.6

Q ss_pred             CCceeEeeee--CCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEE
Q 022835          152 EPLCQVMLRV--GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       152 ~~~~hv~l~v--~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~  229 (291)
                      .+++|+.|.|  .|++++.+||+++|||++..+....... ...++..+    +..+.+.....    ..+.+..|++|.
T Consensus         9 ~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~-~~~~~~~~----~~~l~l~~~~~----~~~~~~~~~~f~   79 (126)
T 2qqz_A            9 QGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKR-GGCWFKCG----NQEIHIGVEQN----FNPAKRAHPAFY   79 (126)
T ss_dssp             EEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGG-CCEEEEET----TEEEEEEECTT----CCCCSSSCEEEE
T ss_pred             ceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCC-CceEEEeC----CEEEEEEecCC----CCCCCceEEEEE
Confidence            3689999999  8999999999999999987653211000 11223322    23455543211    113477999999


Q ss_pred             ecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          230 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       230 v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      |+|++++++++    +++|+++..+|. .+  +.+.+||+|||||.|||+++.
T Consensus        80 v~d~~~~~~~l----~~~G~~~~~~~~-~~--g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           80 VLKIDEFKQEL----IKQGIEVIDDHA-RP--DVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             ETTHHHHHHHH----HHTTCCCEEECS-ST--TEEEEEEECTTSCEEEEEEEC
T ss_pred             cCCHHHHHHHH----HHcCCCccCCCC-CC--CeeEEEEECCCCCEEEEEeCC
Confidence            99999999999    999999887773 22  368899999999999999864

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.68  E-value=8.5e-16  Score=115.75  Aligned_cols=119  Identities=17%  Similarity=0.334  Sum_probs=86.6

Q ss_pred             CCCcceeEEEEEEeCCHHHHHHHH---HhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCC---Ccccc-CC
Q 022835           18 KKDKRRFLHAVYRVGDLDRTIKFY---TECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG---VTSYD-IG   90 (291)
Q Consensus        18 ~~~~~~i~hv~i~v~d~~~~~~FY---~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~---~~~~~-~~   90 (291)
                      .+++.++.|+.|.|+|++++.+||   +++|||++.....  .+   ..|+. +  .  ..+.+.....   ..+.. ..
T Consensus        15 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~~---~~~~~-g--~--~~l~l~~~~~~~~~~~~~~~~   84 (146)
T 3ct8_A           15 LYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--RG---KSYKH-G--K--TYLVFVQTEDRFQTPTFHRKR   84 (146)
T ss_dssp             TTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--TE---EEEEE-T--T--EEEEEEECCGGGSCSCCCTTS
T ss_pred             cccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--CC---ceEec-C--C--eEEEEEEcCCCcccccccccC
Confidence            357899999999999999999999   9999999976543  11   23444 3  2  2344443321   11111 23


Q ss_pred             CCceEEEEEeC---CHHHHHHHHHHcCCeeec-CCccCCC--CceEEEEEECCCCCEEEEEEc
Q 022835           91 TGFGHFAIATE---DVYKLVENIRAKGGNVTR-EPGPLKG--GTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        91 ~~~~~i~~~v~---di~~~~~~l~~~G~~~~~-~~~~~~~--g~~~~~~~~dp~G~~iel~~~  147 (291)
                      .+..|++|.|+   |+++++++|+++|+.+.. .|...++  +.+ .++|+||+||.|||+++
T Consensus        85 ~g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~-~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           85 TGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHY-AVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             SSCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCC-EEEEECTTCCEEEEECC
T ss_pred             CCceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceE-EEEEECCCCCEEEEEeC
Confidence            56789999998   999999999999999877 3544433  333 48999999999999863

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.68  E-value=2.2e-16  Score=120.91  Aligned_cols=119  Identities=13%  Similarity=0.140  Sum_probs=84.8

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCc--------cccccCcc
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV--------TEYTKGNA  222 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--------~~~~~~~~  222 (291)
                      ..++.|+.|.|+|++++.+||+++|||++..+...     ...++..+    +..+.+......        .+...+.+
T Consensus         6 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g----~~~~~l~~~~~~~~~~~~~~~~~~~~~g   76 (160)
T 3r4q_A            6 PSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCG----RQMLLLFDPQESSRADANNPIPRHGAVG   76 (160)
T ss_dssp             CSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEET----TEEEEEECHHHHTCCCTTCCSCCCEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCC----CEEEEEEecCCccCccccCCCCcCCCcc
Confidence            46899999999999999999999999998876431     12223321    123333221110        01122346


Q ss_pred             eeeEEEEe---cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhh
Q 022835          223 YAQVAIST---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       223 ~~h~~f~v---~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                      ..|++|.|   +|++++.+++    +++|+++..++....  +.+.+||+|||||+|||++++..
T Consensus        77 ~~hi~f~V~~~~dld~~~~~l----~~~G~~~~~~~~~~~--g~~~~~~~DPdG~~iel~~~~~~  135 (160)
T 3r4q_A           77 QGHFCFYADDKAEVDEWKTRF----EALEIPVEHYHRWPN--GSYSVYIRDPAGNSVEVGEGKLW  135 (160)
T ss_dssp             ECEEEEEESSHHHHHHHHHHH----HTTTCCCCEEEECTT--SCEEEEEECTTCCEEEEEEGGGG
T ss_pred             eeEEEEEeCCHHHHHHHHHHH----HHCCCEEeccccccC--CcEEEEEECCCCCEEEEEeCCCC
Confidence            79999999   8888888888    999999875544322  36899999999999999998754

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.68  E-value=4.5e-16  Score=112.83  Aligned_cols=111  Identities=14%  Similarity=0.143  Sum_probs=82.4

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecc
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d  232 (291)
                      .+ |+.|.|+|++++.+||+++|||++....    + .. ..+..++. ....+.+....     ....+..|++|.|+|
T Consensus         8 ~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~-~~-~~~~~~~~-~~~~l~l~~~~-----~~~~~~~~~~~~v~d   74 (119)
T 2pjs_A            8 RV-VANIATPEPARAQAFYGDILGMPVAMDH----G-WI-VTHASPLE-AHAQVSFAREG-----GSGTDVPDLSIEVDN   74 (119)
T ss_dssp             EE-EEEEECSCGGGGHHHHTTTTCCCEEEEC----S-SE-EEEEEEEE-EEEEEEEESSS-----BTTBCCCSEEEEESC
T ss_pred             EE-EEEEEcCCHHHHHHHHHHhcCCEEEecC----C-EE-EEEecCCC-CcEEEEEEcCC-----CCCCceeEEEEEECC
Confidence            46 9999999999999999999999987631    1 12 22332111 12334443321     112456899999999


Q ss_pred             hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      ++++.+++    +++|+++..+|...++ +.+.+||+|||||.|||++.
T Consensus        75 ~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           75 FDEVHARI----LKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             HHHHHHHH----HHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHH----HHCCCccccCCccCCC-ccEEEEEECCCCCEEEEEec
Confidence            99999999    9999999888777665 35899999999999999975

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.67  E-value=1.5e-15  Score=114.43  Aligned_cols=121  Identities=20%  Similarity=0.202  Sum_probs=86.8

Q ss_pred             cCCCCCCceeEeeeeCCchhcHHHH---HHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccC---ccccc-c
Q 022835          147 RGPTPEPLCQVMLRVGDLGRSIKFY---EKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG---VTEYT-K  219 (291)
Q Consensus       147 ~~~~~~~~~hv~l~v~d~~~~~~fy---~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~-~  219 (291)
                      +.....++.|+.|.|+|++++.+||   +++|||++......  +  . .++. +    +..+.+.....   ..+.. .
T Consensus        14 ~~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~--~--~-~~~~-g----~~~l~l~~~~~~~~~~~~~~~   83 (146)
T 3ct8_A           14 NLYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR--G--K-SYKH-G----KTYLVFVQTEDRFQTPTFHRK   83 (146)
T ss_dssp             CTTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT--E--E-EEEE-T----TEEEEEEECCGGGSCSCCCTT
T ss_pred             ccccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC--C--c-eEec-C----CeEEEEEEcCCCccccccccc
Confidence            3445678999999999999999999   99999998765432  1  1 1222 1    24455544321   01111 2


Q ss_pred             CcceeeEEEEec---chHHHHHHHHHHHHHhCCeecc-CCccCCCC-CceEEEEECCCCceEEEecc
Q 022835          220 GNAYAQVAISTD---DVYKSAEVVNLVTQELGGKITR-QPGPIPGL-NTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       220 ~~~~~h~~f~v~---d~~~~~~~l~~~~~~~G~~~~~-~p~~~~~~-~~~~~~~~DPdG~~ie~~~~  281 (291)
                      ..+..|++|.|+   |++++++++    +++|+++.. +|...+++ +.+++||+|||||+|||+++
T Consensus        84 ~~g~~hi~f~v~~~~dv~~~~~~l----~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           84 RTGLNHLAFHAASREKVDELTQKL----KERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             SSSCCEEEEECSCHHHHHHHHHHH----HHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             CCCceEEEEECCCHHHHHHHHHHH----HHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            346799999999   888888888    999999887 45544432 35789999999999999864

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.67  E-value=2.9e-16  Score=118.88  Aligned_cols=117  Identities=20%  Similarity=0.208  Sum_probs=86.5

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCcc-----ccccCcceeeE
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-----EYTKGNAYAQV  226 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-----~~~~~~~~~h~  226 (291)
                      .++.|+.|.|+|++++.+||+++|||++....    ..+  .++..+    +..+.+.......     +...+.+..|+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~l   73 (150)
T 3bqx_A            4 QQVAVITLGIGDLEASARFYGEGFGWAPVFRN----PEI--IFYQMN----GFVLATWLVQNLQEDVGVAVTSRPGSMAL   73 (150)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----SSE--EEEECS----SSEEEEEEHHHHHHHHSSCCCSSCCSCEE
T ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----CCE--EEEEcC----CEEEEEEeccccccccCCCCCCCCCeEEE
Confidence            47899999999999999999999999987653    122  333322    2345554321100     00113567899


Q ss_pred             EEEe---cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          227 AIST---DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       227 ~f~v---~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      +|.|   +|++++.+++    +++|+++..+|...++ +.+.+||+|||||+|||++.+.
T Consensus        74 ~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  128 (150)
T 3bqx_A           74 AHNVRAETEVAPLMERL----VAAGGQLLRPADAPPH-GGLRGYVADPDGHIWEIAFNPV  128 (150)
T ss_dssp             EEECSSGGGHHHHHHHH----HHTTCEEEEEEECCTT-SSEEEEEECTTCCEEEEEECTT
T ss_pred             EEEeCCHHHHHHHHHHH----HHCCCEEecCCcccCC-CCEEEEEECCCCCEEEEEeCCC
Confidence            9999   8888888888    9999999888877665 3589999999999999998754

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.67  E-value=7.1e-16  Score=112.80  Aligned_cols=109  Identities=14%  Similarity=0.089  Sum_probs=82.1

Q ss_pred             ceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecch
Q 022835          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~  233 (291)
                      ..|+.|.|+|++++.+||+++|||++....    .++  ..+..+    +..+.+......    ...+..|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~----~~~--~~~~~~----~~~l~l~~~~~~----~~~~~~~~~~~v~dv   71 (124)
T 1xrk_A            6 SAVPVLTARDVAEAVEFWTDRLGFSRVFVE----DDF--AGVVRD----DVTLFISAVQDQ----VVPDNTQAWVWVRGL   71 (124)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEC----SSE--EEEEET----TEEEEEEECSCT----TTGGGCEEEEEEECH
T ss_pred             ceeEEEEcCCHHHHHHHHHHccCceEEecC----CCE--EEEEEC----CEEEEEEcCCCC----CCCCceEEEEEECCH
Confidence            478999999999999999999999987651    122  233322    234444332211    122447999999999


Q ss_pred             HHHHHHHHHHHHHh------CC--eeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          234 YKSAEVVNLVTQEL------GG--KITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~------G~--~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      +++.+++    +++      |+  ++..+|...++ + +.+||+|||||+|||++..
T Consensus        72 ~~~~~~l----~~~~~~~~~G~~~~~~~~~~~~~~-g-~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           72 DELYAEW----SEVVSTNFRDASGPAMTEIVEQPW-G-REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             HHHHHHH----TTTSBSCTTTCSSCEECCCEEETT-E-EEEEEECTTCCEEEEEEC-
T ss_pred             HHHHHHH----HHhcccccCCccccccCCceecCC-C-CEEEEECCCCCEEEEEEec
Confidence            9999999    999      99  88888887776 3 8999999999999999864

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.67  E-value=3.1e-16  Score=116.94  Aligned_cols=120  Identities=18%  Similarity=0.151  Sum_probs=86.6

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccC-----cc-ccccCcceee
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG-----VT-EYTKGNAYAQ  225 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~-----~~-~~~~~~~~~h  225 (291)
                      .++.|+.|.|+|++++.+||++ |||++..+..  ...+.  .+..++   +..+.+.....     +. ....+.+..|
T Consensus         3 ~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~~~--~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~   74 (138)
T 2a4x_A            3 ARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAPHT--EAVLDG---GIRLAWDTVETVRSYDPEWQAPTGGHRFA   74 (138)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCSEE--EEECTT---SCEEEEEEHHHHHHHCTTCCCCBSSCSEE
T ss_pred             ceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCceE--EEEcCC---CeEEEEecCccchhhCcccCCCCCCCeEE
Confidence            3689999999999999999998 9999876532  12222  232211   23454533110     00 1123357789


Q ss_pred             EEEEec---chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhh
Q 022835          226 VAISTD---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       226 ~~f~v~---d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                      ++|.|+   |++++.+++    +++|+++..+|...++ +.+++||+|||||+|||++..++
T Consensus        75 l~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  131 (138)
T 2a4x_A           75 IAFEFPDTASVDKKYAEL----VDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAPLPL  131 (138)
T ss_dssp             EEEECSSHHHHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEECTTCCEEEEEEECTT
T ss_pred             EEEEeCCHHHHHHHHHHH----HHCCCceeeCCcccCC-CcEEEEEECCCCCEEEEEeCCcc
Confidence            999999   888888888    9999999888777665 35889999999999999998754

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.67  E-value=6.9e-16  Score=115.46  Aligned_cols=118  Identities=17%  Similarity=0.151  Sum_probs=83.4

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeec-----CC-Ccc-ccCCCCce
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN-----YG-VTS-YDIGTGFG   94 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~-----~~-~~~-~~~~~~~~   94 (291)
                      .++.|+.|.|+|++++.+||+++|||++..+..  ...+  .++..+  ...  +.+...     .. ... ...+.+ .
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~--~~~~~~--~~~--l~l~~~~~~~~~~~~~~~~~~~~~-~   77 (141)
T 2rbb_A            7 ADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIR--SPIF--RGLDTG--KSC--IGFNAHEAYELMQLAQFSETSGIK-F   77 (141)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHCCEECGGGC--BTTE--EEEECS--SSE--EEEECTHHHHHTTCGGGCCCBSCC-E
T ss_pred             CcccEEEEEECCHHHHHHHHHHhcCCeeecccC--CCce--EEeecC--CEE--EEEcCccccccccccccCCCCCCe-E
Confidence            399999999999999999999999999864321  1222  334332  222  222211     00 011 112334 4


Q ss_pred             EEEEEeC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           95 HFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        95 ~i~~~v~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      |++|.|+   |+++++++|+++|+++..++...++|.+ .++|+||+||+|||++...
T Consensus        78 ~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           78 LLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWY-QAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEE-EEEEECTTSCEEEEEEEC-
T ss_pred             EEEEEcCCHHHHHHHHHHHHHcCCeEecCccccCCccE-EEEEECCCCCEEEEEEccc
Confidence            9999998   5999999999999998888777777654 4899999999999998764

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.66  E-value=6.5e-16  Score=110.92  Aligned_cols=108  Identities=19%  Similarity=0.185  Sum_probs=79.1

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe-
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST-  230 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v-  230 (291)
                      .++.|+.|.|+|++++.+||+++|||++....   +..  ..++..++   +..+.+......    ..++..|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~~--~~~~~~~~---~~~l~l~~~~~~----~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GNA--FAVMRDND---GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TTT--EEEEECTT---CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccC---CCc--EEEEEcCC---CcEEEEEeCCCC----CCCceeEEEEEcC
Confidence            46899999999999999999999999987642   112  23344322   344555443221    124679999999 


Q ss_pred             --cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEe
Q 022835          231 --DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       231 --~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~  279 (291)
                        +|++++.+++    +++|+++. .|... .  ++.+|++|||||+|||+
T Consensus        70 ~~~d~~~~~~~l----~~~G~~~~-~p~~~-~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRL----KEDGFLVE-PPKHA-H--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHH----HHTTCCCC-CCEEC----CEEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHH----HHCCCEEe-cCcCC-C--cEEEEEECCCCcEEEEe
Confidence              7888888888    99999975 45433 2  58999999999999996

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.66  E-value=5.3e-16  Score=117.17  Aligned_cols=116  Identities=16%  Similarity=0.241  Sum_probs=82.4

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCc---cc---cccCcceee
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV---TE---YTKGNAYAQ  225 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~---~~~~~~~~h  225 (291)
                      .++.|+.|.|+|++++.+||+++|||++...   .+..+.+  +..++.    .+.+......   ..   ...+.+ .|
T Consensus        24 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~~~~--~~~~~~----~~~l~~~~~~~~~~~l~~~~~~~g-~~   93 (148)
T 2r6u_A           24 GRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMDYSM--VTTGPV----GESGMPDEPGYINGGMMQRGEVTT-PV   93 (148)
T ss_dssp             CCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTTEEE--EECSCB----CTTSSBCSSSCBCEEEEESSSSCS-CE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCCEEE--EEeCCc----ceeecccCCcccccceeecCCCCe-EE
Confidence            4799999999999999999999999998763   1222333  332221    1111111100   00   001134 59


Q ss_pred             EEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       226 ~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      ++|.|+|++++++++    +++|+++..+|...++. ++.+||+|||||+|||+++.
T Consensus        94 l~f~v~dld~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           94 VTVDVESIESALERI----ESLGGKTVTGRTPVGNM-GFAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             EEEECSCHHHHHHHH----HHTTCEEEEEEEEETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHH----HHcCCeEecCCeecCCC-EEEEEEECCCCCEEEEEecC
Confidence            999999999999999    99999998887766522 48999999999999999875

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.66  E-value=6.6e-16  Score=116.69  Aligned_cols=116  Identities=22%  Similarity=0.206  Sum_probs=74.9

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccc-------cCccccccCcce
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYN-------YGVTEYTKGNAY  223 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-------~~~~~~~~~~~~  223 (291)
                      ..++.||+|.|+|++++++||++ ||+........+.  .......  .   ...+.+...       ........+.+.
T Consensus         7 ~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~~--~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
T 4gym_A            7 QSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDES--CACMVVS--E---QAFVMLIDRARFADFTSKPIADATATTE   78 (149)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBTT--EEEEEEE--T---TEEEEEEEHHHHGGGCSSCBCCTTTCBS
T ss_pred             CccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCCc--eeEEeec--C---cceEeeeccccccccccccCCCCCCCCe
Confidence            56899999999999999999988 5555443322211  2222222  1   111111100       000011223356


Q ss_pred             eeEEEEecc---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          224 AQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       224 ~h~~f~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      .|++|.|.+   ++++.+++    +++|+.+..+|..+++  ++.+||+|||||+|||+-
T Consensus        79 ~~~a~~v~~~~~vd~~~~~~----~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~  132 (149)
T 4gym_A           79 AIVCVSAIDRDDVDRFADTA----LGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMW  132 (149)
T ss_dssp             CEEEEECSSHHHHHHHHHHH----HHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEE
T ss_pred             eEEEEEeccHHHHHHHHHHH----HhcCceeeccccccCC--EEEEEEEcCCCCEEEEEE
Confidence            799999976   44555555    9999999999887765  588999999999999985

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.66  E-value=3.4e-15  Score=110.72  Aligned_cols=118  Identities=13%  Similarity=0.169  Sum_probs=81.9

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeC
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~  101 (291)
                      ..-.+..|.|+|++++.+||+++|||++.....  .    .+++..++    ..+.+...........+.+..|++|.|+
T Consensus         6 ~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~~l~~~v~   75 (134)
T 3fcd_A            6 IHQITPFLHIPDMQEALTLFCDTLGFELKYRHS--N----YAYLELSG----CGLRLLEEPARKIIPDGIARVAICIDVS   75 (134)
T ss_dssp             CCEEEEEEEESCHHHHHHHHTTTTCCEEEEEET--T----EEEEEETT----EEEEEEECCCC---------EEEEEECS
T ss_pred             hhcceeEEEECCHHHHHHHHHhccCcEEEEeCC--C----eEEEEECC----EEEEEEeCCCCCcCCCCCceEEEEEEeC
Confidence            345567899999999999999999999986633  1    35555432    2344443322211112234479999999


Q ss_pred             CHHHHHHHHHHcC----CeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC
Q 022835          102 DVYKLVENIRAKG----GNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       102 di~~~~~~l~~~G----~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      |+++++++|+++|    +++..++...++|.+. ++|+||+||.|||.+....
T Consensus        76 dv~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~-~~~~DPdG~~iel~~~~~~  127 (134)
T 3fcd_A           76 DIDSLHTKLSPALENLPADQVEPLKNMPYGQRE-FQVRMPDGDWLNFTAPLAE  127 (134)
T ss_dssp             CHHHHHHHHHHHHTTSCGGGEEEEEECTTSEEE-EEEECTTSCEEEEEEECCT
T ss_pred             CHHHHHHHHHhcCCccCCccccCCcccCCCcEE-EEEECCCCCEEEEEEcccc
Confidence            9999999999665    4556667777776554 8999999999999998754

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.65  E-value=1.5e-15  Score=109.05  Aligned_cols=108  Identities=20%  Similarity=0.273  Sum_probs=79.8

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEe-
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT-  100 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v-  100 (291)
                      ++++||.|.|+|++++.+||+++|||++.....   ..  ..++..++ .  ..+.+......    +..+..|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~~--~~~~~~~~-~--~~l~l~~~~~~----~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---NA--FAVMRDND-G--FILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---TT--EEEEECTT-C--CEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---Cc--EEEEEcCC-C--cEEEEEeCCCC----CCCceeEEEEEcC
Confidence            579999999999999999999999999876432   12  35555432 2  33444443221    134678999999 


Q ss_pred             --CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEE
Q 022835          101 --EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       101 --~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                        +|+++++++|+++|+++.. |....  . ..++++||+||.|||+
T Consensus        70 ~~~d~~~~~~~l~~~G~~~~~-p~~~~--~-~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRLKEDGFLVEP-PKHAH--A-YTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCC-CEEC---C-EEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCEEec-CcCCC--c-EEEEEECCCCcEEEEe
Confidence              8899999999999999754 44332  2 4489999999999986

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.65  E-value=1.5e-15  Score=112.54  Aligned_cols=120  Identities=15%  Similarity=0.091  Sum_probs=82.2

Q ss_pred             CCCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEE
Q 022835          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       150 ~~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~  229 (291)
                      .+.+++|+.|.|+|++++.+||+++|||++.....    .  +..+...+    ..+.+........ +...+..|++|.
T Consensus         6 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~--~~~~~~~g----~~~~l~~~~~~~~-~~~~~~~h~~~~   74 (135)
T 3rri_A            6 NPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----D--RITLDFFG----DQLVCHLSDRWDR-EVSMYPRHFGIT   74 (135)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----T--EEEEEETT----EEEEEEECSCSCS-SCCSSSCEEEEE
T ss_pred             CCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----C--cEEEEEeC----CEEEEEEcCcccc-cCCCCCCeEEEE
Confidence            35689999999999999999999999999865432    1  22232111    1133322111101 123356899998


Q ss_pred             ecc---hHHHHHHHHHHHHHhCCeeccCCccCC---CCCceEEEEECCCCceEEEecchhh
Q 022835          230 TDD---VYKSAEVVNLVTQELGGKITRQPGPIP---GLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       230 v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~---~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                      +.+   ++++.+++    +++|+++..+|....   .++.+.+||+|||||+|||++..+-
T Consensus        75 ~~~~~d~~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~~  131 (135)
T 3rri_A           75 FRDKKHFDNLYKLA----KQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFDD  131 (135)
T ss_dssp             CSSHHHHHHHHHHH----HHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESSG
T ss_pred             EcChHhHHHHHHHH----HHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECCh
Confidence            864   77777777    999999887776531   1235789999999999999987643

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.65  E-value=1e-15  Score=113.60  Aligned_cols=120  Identities=16%  Similarity=0.154  Sum_probs=80.3

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecc
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d  232 (291)
                      ...+..|.|+|++++.+||+++|||++..+.+    .+  .++..+    +..+.+.........+.+.+..|++|.|+|
T Consensus         7 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~--~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~l~~~v~d   76 (134)
T 3fcd_A            7 HQITPFLHIPDMQEALTLFCDTLGFELKYRHS----NY--AYLELS----GCGLRLLEEPARKIIPDGIARVAICIDVSD   76 (134)
T ss_dssp             CEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TE--EEEEET----TEEEEEEECCCC---------EEEEEECSC
T ss_pred             hcceeEEEECCHHHHHHHHHhccCcEEEEeCC----Ce--EEEEEC----CEEEEEEeCCCCCcCCCCCceEEEEEEeCC
Confidence            45667899999999999999999999876532    12  333322    244555443322111222345799999999


Q ss_pred             hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      ++++.+++..+-.+.|+++..+|...++ +.+.++|+|||||+|||.+...
T Consensus        77 v~~~~~~l~~~g~~~g~~i~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  126 (134)
T 3fcd_A           77 IDSLHTKLSPALENLPADQVEPLKNMPY-GQREFQVRMPDGDWLNFTAPLA  126 (134)
T ss_dssp             HHHHHHHHHHHHTTSCGGGEEEEEECTT-SEEEEEEECTTSCEEEEEEECC
T ss_pred             HHHHHHHHHhcCCccCCccccCCcccCC-CcEEEEEECCCCCEEEEEEccc
Confidence            9999999922222445566667766665 4589999999999999998754

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.65  E-value=2e-15  Score=110.65  Aligned_cols=114  Identities=20%  Similarity=0.281  Sum_probs=82.8

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecc
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d  232 (291)
                      ...++.|.|+|++++.+||++ |||++...    +..+  ..+..+    +..+.+......   ....+..|++|.|+|
T Consensus         3 ~~~~~~l~v~D~~~a~~FY~~-LG~~~~~~----~~~~--~~~~~~----~~~l~l~~~~~~---~~~~~~~~~~~~v~d   68 (126)
T 1ecs_A            3 DQATPNLPSRDFDSTAAFYER-LGFGIVFR----DAGW--MILQRG----DLMLEFFAHPGL---DPLASWFSCCLRLDD   68 (126)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEE----CSSE--EEEEET----TEEEEEEECTTC---CGGGCCCEEEEEESC
T ss_pred             ccEEEEEEeCCHHHHHHHHHH-CCCEEEec----CCCE--EEEEeC----CEEEEEEeCCCC---CCCCcceEEEEEECC
Confidence            356899999999999999998 99998764    1222  333322    234555432221   112467899999999


Q ss_pred             hHHHHHHHHHHHHHhCCee-------ccCCccCCCCCceEEEEECCCCceEEEecchhhH
Q 022835          233 VYKSAEVVNLVTQELGGKI-------TRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~-------~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~  285 (291)
                      ++++.+++    +++|+++       ..+|...++ +.+.+||+|||||.|||++.....
T Consensus        69 v~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~~  123 (126)
T 1ecs_A           69 LAEFYRQC----KSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNELLA  123 (126)
T ss_dssp             HHHHHHHH----HHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECCC--
T ss_pred             HHHHHHHH----HHCCCccccccCccccCCcccCc-ccEEEEEECCCCCEEEEecchhhc
Confidence            99999999    9999984       566666654 358899999999999999987654

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.65  E-value=6.4e-15  Score=107.94  Aligned_cols=112  Identities=21%  Similarity=0.285  Sum_probs=83.1

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCC
Q 022835           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED  102 (291)
Q Consensus        23 ~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d  102 (291)
                      ...++.|.|+|++++.+||++ |||++...    ...  .+++..+  +.  .+.+......   .+..+..|++|.|+|
T Consensus         3 ~~~~~~l~v~D~~~a~~FY~~-LG~~~~~~----~~~--~~~~~~~--~~--~l~l~~~~~~---~~~~~~~~~~~~v~d   68 (126)
T 1ecs_A            3 DQATPNLPSRDFDSTAAFYER-LGFGIVFR----DAG--WMILQRG--DL--MLEFFAHPGL---DPLASWFSCCLRLDD   68 (126)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEE----CSS--EEEEEET--TE--EEEEEECTTC---CGGGCCCEEEEEESC
T ss_pred             ccEEEEEEeCCHHHHHHHHHH-CCCEEEec----CCC--EEEEEeC--CE--EEEEEeCCCC---CCCCcceEEEEEECC
Confidence            356899999999999999998 99999765    122  2444443  22  2344332221   112456899999999


Q ss_pred             HHHHHHHHHHcCCee-------ecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835          103 VYKLVENIRAKGGNV-------TREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       103 i~~~~~~l~~~G~~~-------~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      +++++++|+++|+++       ..+|...++|.+. ++++||+||.|||++...
T Consensus        69 v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~-~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           69 LAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTM-AALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             HHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEE-EEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHHCCCccccccCccccCCcccCcccEE-EEEECCCCCEEEEecchh
Confidence            999999999999984       6666777777554 899999999999999764

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.65  E-value=2.4e-15  Score=111.59  Aligned_cols=111  Identities=25%  Similarity=0.268  Sum_probs=82.7

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec-
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD-  231 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~-  231 (291)
                      ++.|+.|.|+|++++.+||+++|||++.....  +.    .++..+    +..+.+......  .....+..|++|.|+ 
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~----~~~~~~----~~~l~l~~~~~~--~~~~~~~~h~~~~v~~   71 (135)
T 1nki_A            4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWD--QG----AYLELG----SLWLCLSREPQY--GGPAADYTHYAFGIAA   71 (135)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--TE----EEEEET----TEEEEEEECTTC--CCCCSSSCEEEEEECH
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--Cc----eEEecC----CEEEEEEeCCCC--CCCCCCcceEEEEccH
Confidence            58999999999999999999999999876532  11    123322    234555432211  122347789999997 


Q ss_pred             -chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          232 -DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 -d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                       |++++.+++    +++|+++..+|..    +++.+||+|||||+|||++...
T Consensus        72 ~d~~~~~~~l----~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~~  116 (135)
T 1nki_A           72 ADFARFAAQL----RAHGVREWKQNRS----EGDSFYFLDPDGHRLEAHVGDL  116 (135)
T ss_dssp             HHHHHHHHHH----HHTTCCEEECCCS----SSCEEEEECTTCCEEEEESCCH
T ss_pred             HHHHHHHHHH----HHCCCceecCCCC----CeEEEEEECCCCCEEEEEECCc
Confidence             889998888    9999998876543    3578999999999999998765

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.65  E-value=1.2e-15  Score=114.07  Aligned_cols=118  Identities=14%  Similarity=0.138  Sum_probs=81.3

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccc-----cC--ccccccCcceee
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYN-----YG--VTEYTKGNAYAQ  225 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-----~~--~~~~~~~~~~~h  225 (291)
                      ++.|+.|.|+|++++.+||+++|||++..+...  ..+.  .+..+    +..+.+...     ..  ......+.+ .|
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~~~--~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~   78 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRS--PIFR--GLDTG----KSCIGFNAHEAYELMQLAQFSETSGIK-FL   78 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCB--TTEE--EEECS----SSEEEEECTHHHHHTTCGGGCCCBSCC-EE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCC--CceE--EeecC----CEEEEEcCccccccccccccCCCCCCe-EE
Confidence            789999999999999999999999998654321  1122  22221    122222110     00  000112334 59


Q ss_pred             EEEEec---chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhh
Q 022835          226 VAISTD---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       226 ~~f~v~---d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                      ++|.|+   |++++.+++    +++|+++..+|...++ +.+.+||+|||||+|||++...-
T Consensus        79 ~~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  135 (141)
T 2rbb_A           79 LNFDVDTKEAVDKLVPVA----IAAGATLIKAPYETYY-HWYQAVLLDPERNVFRINNVLEG  135 (141)
T ss_dssp             EEEECSCHHHHHHHHHHH----HHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEEC--
T ss_pred             EEEEcCCHHHHHHHHHHH----HHcCCeEecCccccCC-ccEEEEEECCCCCEEEEEEcccc
Confidence            999999   488888888    9999999888876664 46899999999999999987653

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.64  E-value=2.9e-15  Score=112.05  Aligned_cols=114  Identities=24%  Similarity=0.309  Sum_probs=83.5

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCcc-ccccCcceeeEEEEe
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-EYTKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~~~~h~~f~v  230 (291)
                      .++.|+.|.|+|++++.+||+++|||++.....  .  .  .++..+    +..+.+....... ......+..|++|.|
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~hi~~~v   72 (141)
T 1npb_A            3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T--G--AYLTCG----DLWVCLSYDEARQYVPPQESDYTHYAFTV   72 (141)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T--E--EEEEET----TEEEEEEECTTCCCCCGGGSCSCEEEEEC
T ss_pred             ceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C--c--EEEEEC----CEEEEEEECCCCCCCCCCCCCceEEEEEe
Confidence            468999999999999999999999999876542  1  1  223322    2334554322111 112334789999999


Q ss_pred             c--chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          231 D--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~--d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      +  |++++.+++    +++|+++..+|..    +++.+||+|||||+|||++...
T Consensus        73 ~~~d~~~~~~~l----~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~~  119 (141)
T 1npb_A           73 AEEDFEPLSQRL----EQAGVTIWKQNKS----EGASFYFLDPDGHKLELHVGSL  119 (141)
T ss_dssp             CHHHHHHHHHHH----HHTTCCEEECCCS----SSEEEEEECTTCCEEEEEECCH
T ss_pred             CHHHHHHHHHHH----HHCCCeEeccCCC----ceeEEEEECCCCCEEEEEECch
Confidence            6  889999998    9999998876542    3589999999999999998764

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.64  E-value=1.7e-15  Score=114.41  Aligned_cols=122  Identities=16%  Similarity=0.200  Sum_probs=80.0

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeee---c--CCCccccCCCCce
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY---N--YGVTSYDIGTGFG   94 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~---~--~~~~~~~~~~~~~   94 (291)
                      ...+|.||.|.|+|++++++||++ +|+.......  .... ..+.. +. .....+....   .  ........+.+..
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~--~~~~-~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFT--DESC-ACMVV-SE-QAFVMLIDRARFADFTSKPIADATATTEA   79 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGC--BTTE-EEEEE-ET-TEEEEEEEHHHHGGGCSSCBCCTTTCBSC
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHH-hCCCcceeec--CCce-eEEee-cC-cceEeeeccccccccccccCCCCCCCCee
Confidence            467899999999999999999998 6665543222  2222 12221 11 1111111110   0  0111112334567


Q ss_pred             EEEEEeC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           95 HFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        95 ~i~~~v~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      |++|.|.   ++++++++++++|+.+..+|...+++  ..+||+|||||+|||+...+
T Consensus        80 ~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~--~~~~f~DPDGn~iEi~~~~p  135 (149)
T 4gym_A           80 IVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGFM--YGRSFHDLDGHLWEVMWMSA  135 (149)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSSE--EEEEEECTTCCEEEEEEECT
T ss_pred             EEEEEeccHHHHHHHHHHHHhcCceeeccccccCCE--EEEEEEcCCCCEEEEEEECh
Confidence            9999995   57899999999999999888877664  34899999999999987653

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.64  E-value=1.1e-15  Score=130.61  Aligned_cols=118  Identities=28%  Similarity=0.513  Sum_probs=91.5

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCC-----------CcceeEEEecccccccceeEeeccccCcccccc
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-----------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK  219 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~  219 (291)
                      +.++.|+.|.|+|++++.+||+++|||++..+....           ++++..+++..+.......++|........+..
T Consensus        25 ~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~  104 (330)
T 3zi1_A           25 ARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKL  104 (330)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCCCCCB
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCCcccc
Confidence            458999999999999999999999999987765433           345667777665444456778766544434455


Q ss_pred             CcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       220 ~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      ++++.|++|.|+|+   .+++    +++|+++...|.       .++||+||||+.|||++..
T Consensus       105 ~~g~~hiaf~V~d~---~~~l----~~~G~~~~~~~~-------~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A          105 GNDFMGITLASSQA---VSNA----RKLEWPLTEVAE-------GVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             CSSEEEEEEECHHH---HHHH----HHHTCCCEEEET-------TEEEEECTTSCEEEEESSC
T ss_pred             CCCeeEEEEECchH---HHHH----HHcCCceeccCC-------ceEEEECCCCCEEEEEecC
Confidence            67899999999996   5566    889999876542       3789999999999999975

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.64  E-value=1.2e-15  Score=111.15  Aligned_cols=108  Identities=14%  Similarity=0.079  Sum_probs=80.8

Q ss_pred             ceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecch
Q 022835          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~  233 (291)
                      ..++.|.|+|++++.+||+++|||++...   . .++  ..+..+    +..+.+......   + ..+..|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~---~-~~~--~~~~~~----~~~l~l~~~~~~---~-~~~~~~~~~~v~dv   71 (122)
T 1qto_A            6 GAVPVLTAVDVPANVSFWVDTLGFEKDFG---D-RDF--AGVRRG----DIRLHISRTEHQ---I-VADNTSAWIEVTDP   71 (122)
T ss_dssp             CCCCEEEESSHHHHHHHHHHTTCCEEEEE---C-SSE--EEEEET----TEEEEEEECSCH---H-HHTTCEEEEEESCH
T ss_pred             ceeEEEEcCCHHHHHHHHHhccCcEEeeC---C-CCE--EEEEEC----CEEEEEEcCCCC---C-CCCceEEEEEECCH
Confidence            45789999999999999999999998754   1 122  333322    244555432211   1 12347999999999


Q ss_pred             HHHHHHHHHHHHHh------CC--eeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          234 YKSAEVVNLVTQEL------GG--KITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       234 ~~~~~~l~~~~~~~------G~--~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      +++.+++    +++      |+  ++..+|...++ + +.++|+|||||+|||+++
T Consensus        72 d~~~~~l----~~~~~~~~~G~~~~~~~~~~~~~~-g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           72 DALHEEW----ARAVSTDYADTSGPAMTPVGESPA-G-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHH----TTTSCSCTTCTTSCEECCCEEETT-E-EEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHH----HhhccccccCccccccCCCcCCCC-C-cEEEEECCCCCEEEEecC
Confidence            9999999    999      99  88888777665 3 889999999999999985

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.64  E-value=2e-16  Score=118.29  Aligned_cols=117  Identities=18%  Similarity=0.207  Sum_probs=84.5

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEe-----ee--c-CCCccccCCC
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVEL-----TY--N-YGVTSYDIGT   91 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~-----~~--~-~~~~~~~~~~   91 (291)
                      .++++.|+.|.|+|++++.+||+++|||++.....    .  ...+.  . +  +.+..     ..  + ........+.
T Consensus         5 ~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~----~--~~~~~--~-g--~~l~~~~~~~~~~~~~~~~~~~~~~~   73 (141)
T 2qnt_A            5 QGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG----S--FVLFE--T-G--FAIHEGRSLEETIWRTSSDAQEAYGR   73 (141)
T ss_dssp             CSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS----S--EEEET--T-S--CEEEEHHHHHHHHHSCCC--CCCSCC
T ss_pred             cccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC----C--cEEEe--c-c--ceeccCchhhhhccccCCccccccCC
Confidence            46889999999999999999999999999875431    1  12232  1 1  22221     01  0 1111122345


Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           92 GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        92 ~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      +..|++|.|+|+++++++|++ |+++..++...++|... ++++||+||.|||++..+
T Consensus        74 ~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~~-~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           74 RNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQRV-FRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             SSCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCEE-EEEECTTCCEEEEEECC-
T ss_pred             CceEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCEE-EEEECCCCCEEEEEecch
Confidence            788999999999999999999 99988887777777554 899999999999999764

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.64  E-value=1.5e-15  Score=114.54  Aligned_cols=117  Identities=17%  Similarity=0.192  Sum_probs=81.5

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccC---ccccccCcceeeEE
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG---VTEYTKGNAYAQVA  227 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~~~~~~~h~~  227 (291)
                      ..++.|+.|.|+|++++.+||+++|||++....   +. ...  +..++    ..+.+.....   +......++..|++
T Consensus        25 i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~-~~~--l~~g~----~~l~l~~~~~~~~~~~~~~~~g~~~~~   94 (147)
T 3zw5_A           25 IRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---ED-RKA--LCFGD----QKFNLHEVGKEFEPKAAHPVPGSLDIC   94 (147)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---TT-EEE--EEETT----EEEEEEETTSCCSSCCSSCCTTCCEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---CC-ceE--EEECC----cEEEEEEcCCCcCcccCCCCCCCceEE
Confidence            457999999999999999999999999987542   11 222  22222    2333322111   11112334678899


Q ss_pred             EEec-chHHHHHHHHHHHHHhCCeeccCCccCCCC--CceEEEEECCCCceEEEecc
Q 022835          228 ISTD-DVYKSAEVVNLVTQELGGKITRQPGPIPGL--NTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       228 f~v~-d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~--~~~~~~~~DPdG~~ie~~~~  281 (291)
                      |.+. |++++.++|    +++|+++..+|....+.  ..+.+||+|||||+|||++.
T Consensus        95 ~~~~~dl~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A           95 LITEVPLEEMIQHL----KACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             EECSSCHHHHHHHH----HHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             EEeccCHHHHHHHH----HHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            9886 999999999    99999988666543322  23689999999999999863

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.63  E-value=2.3e-15  Score=109.70  Aligned_cols=109  Identities=15%  Similarity=0.105  Sum_probs=81.0

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCC
Q 022835           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED  102 (291)
Q Consensus        23 ~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d  102 (291)
                      .-.++.|.|+|++++.+||+++|||++...    ..+  ..++..+  +  ..+.+...... +  . .+..|++|.|+|
T Consensus         5 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~----~~~--~~~~~~~--~--~~l~l~~~~~~-~--~-~~~~~~~~~v~d   70 (122)
T 1qto_A            5 LGAVPVLTAVDVPANVSFWVDTLGFEKDFG----DRD--FAGVRRG--D--IRLHISRTEHQ-I--V-ADNTSAWIEVTD   70 (122)
T ss_dssp             CCCCCEEEESSHHHHHHHHHHTTCCEEEEE----CSS--EEEEEET--T--EEEEEEECSCH-H--H-HTTCEEEEEESC
T ss_pred             cceeEEEEcCCHHHHHHHHHhccCcEEeeC----CCC--EEEEEEC--C--EEEEEEcCCCC-C--C-CCceEEEEEECC
Confidence            345799999999999999999999999765    122  2444433  2  23344332211 1  1 123699999999


Q ss_pred             HHHHHHHHHHc------CC--eeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835          103 VYKLVENIRAK------GG--NVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       103 i~~~~~~l~~~------G~--~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      +++++++|+++      |+  .+..++...++| + .++++||+||.|+|+++
T Consensus        71 vd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~-~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           71 PDALHEEWARAVSTDYADTSGPAMTPVGESPAG-R-EFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHHHTTTSCSCTTCTTSCEECCCEEETTE-E-EEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHhhccccccCccccccCCCcCCCCC-c-EEEEECCCCCEEEEecC
Confidence            99999999999      99  887777777776 4 48999999999999985

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.63  E-value=7.8e-15  Score=125.95  Aligned_cols=123  Identities=14%  Similarity=0.109  Sum_probs=92.8

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      +.+.+|+||.|.|+|++++.+||+++|||++..... +++.....|+..++....  +.+.....    ....++.|++|
T Consensus       149 ~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~~~~--l~~~~~~~----~~~~~~~Hiaf  221 (339)
T 3lm4_A          149 IPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLLGHE--VACMRDMT----GGHGKLHHLAF  221 (339)
T ss_dssp             SCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSSSCS--EEEEECTT----SCCSEEEEEEE
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCCceE--EEEeccCC----CCCCceeEEEE
Confidence            468999999999999999999999999999887654 333445677765543222  33333111    12346899999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+|   +++++++|+++|+++...|.....+...++||+||+||+|||+...
T Consensus       222 ~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  274 (339)
T 3lm4_A          222 FYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEA  274 (339)
T ss_dssp             ECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCC
T ss_pred             EeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcC
Confidence            9999   8889999999999988766654444555699999999999998655

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.63  E-value=1.5e-14  Score=122.53  Aligned_cols=122  Identities=16%  Similarity=0.166  Sum_probs=90.7

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCC-CceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~   97 (291)
                      ..+.+|+||.|.|+|++++.+||+++|||++......+. +.....|+..++....+  .+....      ...++.|+|
T Consensus       147 ~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~Hia  218 (309)
T 3hpy_A          147 IAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDI--AFVEYP------EKGKLHHCS  218 (309)
T ss_dssp             SCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSE--EEEECS------STTEEEEEE
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeE--EEecCC------CCCceeEEE
Confidence            568999999999999999999999999999877654333 23456677655433222  222211      123589999


Q ss_pred             EEeCCHH---HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           98 IATEDVY---KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~di~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |.|+|++   +++++|+++|+++...|.....+...++||+||+||+|||....
T Consensus       219 f~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          219 FLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             EECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            9998766   46789999999987766655554455689999999999998874

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.61  E-value=1.3e-15  Score=113.87  Aligned_cols=116  Identities=16%  Similarity=0.197  Sum_probs=82.7

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEe-----eccc---cCccccccCcc
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLE-----LTYN---YGVTEYTKGNA  222 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----l~~~---~~~~~~~~~~~  222 (291)
                      ..++.|+.|.|+|++++.+||+++|||++.....    .+  ..+..     +..+.     +...   ........+.+
T Consensus         6 ~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~--~~~~~-----g~~l~~~~~~~~~~~~~~~~~~~~~~~~   74 (141)
T 2qnt_A            6 GMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG----SF--VLFET-----GFAIHEGRSLEETIWRTSSDAQEAYGRR   74 (141)
T ss_dssp             SCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS----SE--EEETT-----SCEEEEHHHHHHHHHSCCC--CCCSCCS
T ss_pred             ccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC----Cc--EEEec-----cceeccCchhhhhccccCCccccccCCC
Confidence            4578999999999999999999999999875431    12  22221     12221     1110   01111123357


Q ss_pred             eeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          223 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       223 ~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      ..|++|.|+|++++.+++    ++ |+++..+|...++ +.+.+||+|||||+|||++..+
T Consensus        75 ~~~~~~~v~dv~~~~~~l----~~-G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           75 NMLLYFEHADVDAAFQDI----AP-HVELIHPLERQAW-GQRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             SCEEEEEESCHHHHHC-C----GG-GSCEEEEEEECTT-SCEEEEEECTTCCEEEEEECC-
T ss_pred             ceEEEEEeCcHHHHHHHH----Hc-CCccccCCccCCC-CCEEEEEECCCCCEEEEEecch
Confidence            789999999999999999    99 9998888877765 3588999999999999998754

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.61  E-value=8.8e-15  Score=110.35  Aligned_cols=118  Identities=17%  Similarity=0.127  Sum_probs=80.2

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEee-ecCCCcccc-CC-------
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELT-YNYGVTSYD-IG-------   90 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~-~~~~~~~~~-~~-------   90 (291)
                      .+.++.|+.|.|+|++++.+||+++|||++........ .+.  ++  +.   .  +.+. ......... .+       
T Consensus        18 ~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~~--~~--g~---~--l~l~~~~~~~~~~~~~~~~~~~g~   87 (148)
T 3bt3_A           18 YVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDE-GFG--DY--GC---V--FDYPSEVAVAHLTPFRGFHLFKGE   87 (148)
T ss_dssp             CEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTT-SCE--EE--EE---E--ESSCTTTTSCC--CCCSEEEEESC
T ss_pred             ceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCC-Ccc--EE--cc---E--EEEeccCCCcccccccccceeecc
Confidence            47899999999999999999999999999864211112 222  22  21   1  3331 111100000 01       


Q ss_pred             CCceEEEE-EeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           91 TGFGHFAI-ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        91 ~~~~~i~~-~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ....+.+| .|+|+++++++|+++|+++..++...++|.+. ++|+||+||.|||+++.
T Consensus        88 ~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           88 PIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARE-CSITTTDGCILRFFESI  145 (148)
T ss_dssp             CCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEEE-EEEECTTSCEEEEEEEC
T ss_pred             CCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccEE-EEEECCCCCEEEEeeec
Confidence            01112255 89999999999999999988888777776554 89999999999999864

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.60  E-value=2.7e-14  Score=121.74  Aligned_cols=120  Identities=19%  Similarity=0.239  Sum_probs=89.2

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      ..+.+|+|+.|.|+|++++.+|| ++|||++......+.+.....|+..+.....  +.+...       .+.+++|++|
T Consensus       148 ~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~--~~~~~~-------~~~~~~Hiaf  217 (323)
T 1f1u_A          148 GELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHD--TALTGG-------NGPRMHHVAF  217 (323)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCS--EEEEES-------SBSEEEEEEE
T ss_pred             CCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCccc--EEEeCC-------CCCCceEEEE
Confidence            56899999999999999999999 9999998776554444445566665432222  333322       1237899999


Q ss_pred             EeCCHHH---HHHHHHHcCC--eeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           99 ATEDVYK---LVENIRAKGG--NVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~di~~---~~~~l~~~G~--~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+|+++   ++++|+++|+  ++...+.....+...++|++||+||.||+....
T Consensus       218 ~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          218 ATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             ECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            9999998   9999999999  877544333333344589999999999998764

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.60  E-value=2.9e-14  Score=120.66  Aligned_cols=122  Identities=18%  Similarity=0.236  Sum_probs=87.1

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCC-ceEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTG-FGHFA   97 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~i~   97 (291)
                      +.+++|+||.|.|+|++++.+||+++|||++........+.....|+..+.....+  .+...       ...+ ..|+|
T Consensus       146 ~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~-------~~~g~~~hi~  216 (307)
T 1mpy_A          146 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDV--AFIHH-------PEKGRLHHVS  216 (307)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSE--EEEEC-------SSSSEEEEEE
T ss_pred             CCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCceeE--EEecC-------CCCCcceEEE
Confidence            56899999999999999999999999999987654322221222455544322222  22221       1234 78999


Q ss_pred             EEeC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           98 IATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        98 ~~v~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      |.|+   ++++++++|+++|+++..+|...+.+....+||+||+||+|||++...
T Consensus       217 f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  271 (307)
T 1mpy_A          217 FHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  271 (307)
T ss_dssp             EECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             EEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEeccc
Confidence            9998   577788999999999876665544332335899999999999999753

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.60  E-value=2.2e-14  Score=107.74  Aligned_cols=116  Identities=16%  Similarity=0.249  Sum_probs=77.9

Q ss_pred             EEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeec---CC-----CccccCCCCceEE
Q 022835           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN---YG-----VTSYDIGTGFGHF   96 (291)
Q Consensus        25 ~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~---~~-----~~~~~~~~~~~~i   96 (291)
                      ..+.|.|+|++++.+||+++|||++......+  .  .+++..+  +..+  .+...   ..     ......+.++. +
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~--~--~~~l~~g--~~~l--~l~~~~~~~~~~~~~~~~~~~~~g~~-~   77 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPDE--E--FVYLTLD--GVDV--MLEGIAGKSRKWLSGDLEFPLGSGVN-F   77 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGGG--T--EEEEEET--TEEE--EEEEC-----------CCSSTTTTEE-E
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCCC--C--EEEEEcC--CeEE--EEEeccCCCcccccCccccCCCCceE-E
Confidence            45899999999999999999999987533321  2  2445443  2222  23221   01     01112234554 9


Q ss_pred             EEEeCCHHHHHHHHHH-cCCeeecCCcc-------CCCCceEEEEEECCCCCEEEEEEcCCC
Q 022835           97 AIATEDVYKLVENIRA-KGGNVTREPGP-------LKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        97 ~~~v~di~~~~~~l~~-~G~~~~~~~~~-------~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      +|.|+|+++++++|++ +|+++..++..       ..++.. .++|+|||||+|||++....
T Consensus        78 ~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~-~~~~~DPdG~~iel~~~~~~  138 (145)
T 2rk9_A           78 QWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQK-QFMVQTPDGYLFRFCQDIHE  138 (145)
T ss_dssp             EEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEE-EEEEECTTCCEEEEEEC---
T ss_pred             EEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcce-EEEEECCCCCEEEEEEcCCC
Confidence            9999999999999999 99998876654       233333 48899999999999997753

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.60  E-value=8.7e-15  Score=110.38  Aligned_cols=116  Identities=13%  Similarity=0.056  Sum_probs=78.4

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEee-ccccCccccccCcceeeE----
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLEL-TYNYGVTEYTKGNAYAQV----  226 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l-~~~~~~~~~~~~~~~~h~----  226 (291)
                      .++.|+.|.|+|++++.+||+++|||++.......+ ++.+  ++       ..+.+ ................++    
T Consensus        20 ~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~~~--~g-------~~l~l~~~~~~~~~~~~~~~~~~~g~~~   89 (148)
T 3bt3_A           20 VRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDE-GFGD--YG-------CVFDYPSEVAVAHLTPFRGFHLFKGEPI   89 (148)
T ss_dssp             EEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTT-SCEE--EE-------EEESSCTTTTSCC--CCCSEEEEESCCC
T ss_pred             EEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCC-CccE--Ec-------cEEEEeccCCCcccccccccceeeccCC
Confidence            368999999999999999999999999853211111 1222  22       11444 111110000000111122    


Q ss_pred             ----EE-EecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          227 ----AI-STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       227 ----~f-~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                          +| .|+|++++++++    +++|+++..+|...++ +.+.+||+|||||.|||+++.
T Consensus        90 ~~~~~~~~v~dvd~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           90 KGVAGFMMIEGIDALHKYV----KENGWDQISDIYTQPW-GARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             SSEEEEEEEECHHHHHHHH----HHTTCCCBCCCEEETT-TEEEEEEECTTSCEEEEEEEC
T ss_pred             CccEEEEEcCCHHHHHHHH----HHcCCccccCcccCCC-ccEEEEEECCCCCEEEEeeec
Confidence                65 999999999999    9999999888877765 458899999999999999853

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.59  E-value=1.1e-14  Score=109.32  Aligned_cols=117  Identities=15%  Similarity=0.082  Sum_probs=78.3

Q ss_pred             eeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeecccc--C------ccccccCcceeeE
Q 022835          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY--G------VTEYTKGNAYAQV  226 (291)
Q Consensus       155 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~--~------~~~~~~~~~~~h~  226 (291)
                      ..+.|.|+|++++.+||+++|||++......  ..+  .++..+    +..+.+....  +      ....+.+.+.. +
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~--~~~--~~l~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~-~   77 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPD--EEF--VYLTLD----GVDVMLEGIAGKSRKWLSGDLEFPLGSGVN-F   77 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGG--GTE--EEEEET----TEEEEEEEC-----------CCSSTTTTEE-E
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCC--CCE--EEEEcC----CeEEEEEeccCCCcccccCccccCCCCceE-E
Confidence            5688999999999999999999998753221  122  223322    2334443220  0      00112233544 9


Q ss_pred             EEEecchHHHHHHHHHHHHH-hCCeeccCCccC------CCCCceEEEEECCCCceEEEecchhh
Q 022835          227 AISTDDVYKSAEVVNLVTQE-LGGKITRQPGPI------PGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       227 ~f~v~d~~~~~~~l~~~~~~-~G~~~~~~p~~~------~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                      +|.|+|+++++++|    ++ +|+++..+|...      ...+.+.+||+|||||+|||++....
T Consensus        78 ~~~v~dvd~~~~~l----~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~~  138 (145)
T 2rk9_A           78 QWDVIDIEPLYQRV----NESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIHE  138 (145)
T ss_dssp             EEECSCHHHHHHHH----HHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC---
T ss_pred             EEEECCHHHHHHHH----HhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCCC
Confidence            99999999999999    99 999988777642      12235789999999999999987654

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.59  E-value=3.5e-14  Score=119.74  Aligned_cols=122  Identities=16%  Similarity=0.284  Sum_probs=87.6

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCC--------C-ceEEEEEecCCCCcceEEEeeecCCCccccC
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE--------E-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDI   89 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~--------~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~   89 (291)
                      ..+.+|+||.|.|+|++++.+||+++|||++......+.        + .....|+..++....  +.+...      ..
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~--~~~~~~------~~  209 (300)
T 2zyq_A          138 TGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHS--LAFLPM------PT  209 (300)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCS--EEEESS------CC
T ss_pred             cCCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccE--EEEecC------CC
Confidence            357899999999999999999999999999875432221        1 234556655432222  333321      12


Q ss_pred             CCCceEEEEEeCCHHH---HHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           90 GTGFGHFAIATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        90 ~~~~~~i~~~v~di~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ..+..|++|.|+|+++   ++++|+++|+++..+|...+.+...++||+||+||+|||++..
T Consensus       210 ~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          210 SSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             SSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             CCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            3468899999998665   5999999999988766554444344589999999999999865

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.58  E-value=2.2e-14  Score=122.64  Aligned_cols=124  Identities=15%  Similarity=0.220  Sum_probs=87.5

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCC--CcceeEEEecccccccceeEeeccccCccc-cccCcceeeEE
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--EYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVA  227 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~  227 (291)
                      ..+++|+++.|+|++++.+||+++|||++..+....  .+.+.++ +.......+..+.+........ .....++.|++
T Consensus         6 i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~-~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hia   84 (335)
T 3oaj_A            6 TMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLY-FGNEGGKPGTIITFFPWAGARQGVIGDGQVGVTS   84 (335)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEE-EESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             CCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEE-EecCCCCCCcEEEEEECCCCCCCCCCCCceEEEE
Confidence            468999999999999999999999999998775332  2223333 3321111234555543322211 12234789999


Q ss_pred             EEec--chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          228 ISTD--DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       228 f~v~--d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      |.|+  |++++.++|    +++|+++..  ...  .+.+.+||+|||||+|||++..+
T Consensus        85 f~V~~~dl~~~~~rL----~~~Gv~~~~--~~~--~g~~~~~f~DPdGn~iEl~~~~~  134 (335)
T 3oaj_A           85 YVVPKGAMAFWEKRL----EKFNVPYTK--IER--FGEQYVEFDDPHGLHLEIVEREE  134 (335)
T ss_dssp             EEECTTCHHHHHHHH----HHTTCCCEE--EEE--TTEEEEEEECTTSCEEEEEECSC
T ss_pred             EEecHHHHHHHHHHH----HhCcceeee--ecc--CCcEEEEEECCCCCEEEEEEeCC
Confidence            9999  888888888    999998874  222  24689999999999999999764

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.57  E-value=5.5e-14  Score=118.09  Aligned_cols=121  Identities=20%  Similarity=0.252  Sum_probs=86.8

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccC--CC-ceEEEEEecCCCCcceEEEeeecCCCccccCCCCceE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--EE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   95 (291)
                      +.+++|+||.|.|+|++++.+||+++|||++......+  .+ .....|+..+.....  +.+....      ...+..|
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~h  209 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHT--IALAAFP------IPKRIHH  209 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCS--EEEECCS------CSSSEEE
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcce--EEEecCC------CCCceEE
Confidence            45789999999999999999999999999987543221  11 223456655432222  2232211      1347899


Q ss_pred             EEEEeCCHHH---HHHHHHHcCCeeecCCccCCCCceEEEEEECCCCC-EEEEEEcC
Q 022835           96 FAIATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY-IFELIQRG  148 (291)
Q Consensus        96 i~~~v~di~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~-~iel~~~~  148 (291)
                      ++|.|+|+++   ++++|+ +|+++..+|...+.+...++||+||+|| +|||++..
T Consensus       210 iaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          210 FMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             EEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            9999998664   678999 9999887766555554455899999999 99999865

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.56  E-value=8.8e-14  Score=117.92  Aligned_cols=116  Identities=17%  Similarity=0.312  Sum_probs=88.2

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      ..+.+|+||.|.|+|++++.+||+++|||++.....  .   ...|+..+.....  +.+...       + .|+.|++|
T Consensus       137 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~---~~~fl~~~~~~~~--l~l~~~-------~-~g~~hi~f  201 (310)
T 3b59_A          137 GVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG--D---FMCFLRCNSAHHR--IAILPG-------P-PCLNHVAY  201 (310)
T ss_dssp             CCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET--T---TEEEEESSSBSCS--EEEEES-------S-SEEEEEEE
T ss_pred             CcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC--C---eEEEEecCCCcce--EEEECC-------C-CceEEEEE
Confidence            468999999999999999999999999999876532  1   2456655432222  333322       1 46899999


Q ss_pred             EeCCHHHH---HHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           99 ATEDVYKL---VENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        99 ~v~di~~~---~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .|+|++++   +++|+++|+++...+.....+...++||+||+|+.||+.+...
T Consensus       202 ~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  255 (310)
T 3b59_A          202 DMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELE  255 (310)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             EcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCcc
Confidence            99997776   9999999999877665544444445899999999999998763

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.56  E-value=1.7e-14  Score=120.69  Aligned_cols=122  Identities=19%  Similarity=0.121  Sum_probs=86.6

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCc-ceeEEEecccccccceeEeeccccCccccccCcceeeEEEE
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~  229 (291)
                      ++.+.|+.|.|+|++++++||+++|||++.......+. .+..+...  +   .....+....+.. .......++++|.
T Consensus        30 ~g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~--g---~~~~~l~~~~~~~-~~~~~~~~~~~~~  103 (282)
T 3oxh_A           30 QGTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYSMATLN--G---EAVAAIAPMPPGA-PEGMPPIWNTYIA  103 (282)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEEEEEET--T---EEEEEEEECCSCC----CCCEEEEEEE
T ss_pred             CCCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEEEEEeC--C---eeeEeeccCCCCC-CCCCCCcEEEEEE
Confidence            56899999999999999999999999998765332111 34433322  2   1222222211111 1123456899999


Q ss_pred             ecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          230 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       230 v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      |+|++++++++    +++|+++..+|...+. .+++++|+||+||.|||++...
T Consensus       104 v~d~d~~~~~l----~~~G~~~~~~p~~~~~-~g~~~~~~DP~G~~i~l~~~~~  152 (282)
T 3oxh_A          104 VDDVDAVVDKV----VPGGGQVMMPAFDIGD-AGRMSFITDPTGAAVGLWQANR  152 (282)
T ss_dssp             CSCHHHHHTTT----TTTTCEEEEEEEEETT-TEEEEEEECTTCCEEEEEEESS
T ss_pred             eCCHHHHHHHH----HHCCCEEEECCEecCC-CeEEEEEECCCCCEEEEEEccc
Confidence            99999999999    9999999888877654 3589999999999999998765

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.55  E-value=8.5e-14  Score=117.24  Aligned_cols=120  Identities=18%  Similarity=0.267  Sum_probs=87.7

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEecc---CCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDV---PEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i   96 (291)
                      .+.+|.|+.|.|+|++++.+||+++|||++......   ++......|+..+.....  +.+...+      ...+..|+
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~l~~~~------~~~~~~hi  210 (297)
T 1lgt_A          139 GEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHT--LAIAAFP------LPKRIHHF  210 (297)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCS--EEEECCC------CSSSEEEE
T ss_pred             CccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcce--EEEEcCC------CCCCceEE
Confidence            578999999999999999999999999998754221   111123456654432222  3333211      13578899


Q ss_pred             EEEeCCHHHHH---HHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           97 AIATEDVYKLV---ENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~di~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +|.|+|++++.   ++ +++|+++..+|...+++...++||+||+||+|||++..
T Consensus       211 af~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          211 MLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             EEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             EEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            99999988766   88 99999988777666655555589999999999999865

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.54  E-value=5.4e-14  Score=118.95  Aligned_cols=121  Identities=13%  Similarity=0.239  Sum_probs=85.9

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccC--CC-ceEEEEEecCCCCcceEEEeeecCCCccccCCCCceE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--EE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   95 (291)
                      ..+.+|+||.|.|+|++++.+|| ++|||++......+  .+ .....|+..+.....  +.+...      ....+..|
T Consensus       142 ~~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~h  212 (305)
T 2wl9_A          142 TEGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHS--LAFGVG------PMDKRINH  212 (305)
T ss_dssp             CTTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCS--EEECCS------CCSSSEEE
T ss_pred             cCCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceE--EEEecC------CCCCCceE
Confidence            35789999999999999999999 99999986432211  11 223455654432222  222211      11247899


Q ss_pred             EEEEeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           96 FAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ++|.|+|   +++++++|+++|+++...+.....+...++||+||+||+|||+...
T Consensus       213 iaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          213 LMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            9999988   6678899999999988766555544444589999999999999865

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.53  E-value=6.4e-14  Score=121.04  Aligned_cols=118  Identities=21%  Similarity=0.158  Sum_probs=82.2

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .++.||.|.|+|++++++||+++|||++..+..   +  .. .+...+......+.+..       ...+++.|++|.|.
T Consensus        16 ~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~---~--~~-~lr~~~~~~~~~l~l~~-------~~~~gl~~~a~~v~   82 (365)
T 4ghg_A           16 LRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE---N--QI-YLRSFEEFIHHNLVLTK-------GPVAALKAMAFRVR   82 (365)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS---S--EE-EEECTTCCSSCSEEEEE-------CSSCEEEEEEEEES
T ss_pred             CEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC---C--EE-EEEeCCCCcceEEEecc-------CCCCCcceEEEEeC
Confidence            478999999999999999999999999887632   1  22 23322222233344432       12348899999998


Q ss_pred             chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      + .+.++++.++|+++|+++...+.....+.++.+||+|||||.|||+...+
T Consensus        83 s-~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~  133 (365)
T 4ghg_A           83 T-PEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETT  133 (365)
T ss_dssp             S-HHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             C-HHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEee
Confidence            7 34444444555999999877655432224678999999999999986543

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.52  E-value=1e-13  Score=117.04  Aligned_cols=120  Identities=13%  Similarity=0.216  Sum_probs=84.7

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccC--CC-ceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--EE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i   96 (291)
                      ..++|+||.|.|+|++++.+|| ++|||++......+  .+ .....|+..+....  .+.+...      ....+..|+
T Consensus       146 ~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~hi  216 (302)
T 2ehz_A          146 GDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDH--SIAFGAM------PAAKRLNHL  216 (302)
T ss_dssp             GGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSC--SEEECSC------CCSSSEEEE
T ss_pred             CCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCc--EEEEecC------CCCCceeEE
Confidence            4679999999999999999999 99999986432211  21 23445665443221  1222221      112467899


Q ss_pred             EEEeCCHH---HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           97 AIATEDVY---KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~di~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +|.|+|++   +++++|+++|+++..+|...+.+...++||+||+||.|||+...
T Consensus       217 af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          217 MLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence            99998876   46779999999988766655544444589999999999999864

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.52  E-value=1.5e-13  Score=117.87  Aligned_cols=126  Identities=15%  Similarity=0.175  Sum_probs=85.0

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCC-CcceeEEEecccccccceeEeeccccCccc-cccCcceeeEEE
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-EYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAI  228 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~f  228 (291)
                      ..++.|+.|.|+|++++.+||+++|||++..+.... +.+.....+.......+..+.+........ .....+..|++|
T Consensus        28 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hiaf  107 (338)
T 1zsw_A           28 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGL  107 (338)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEE
T ss_pred             CccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEEE
Confidence            467999999999999999999999999987654211 111222223321111233444433211111 112347889999


Q ss_pred             Eec---chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          229 STD---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v~---d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      .|+   |++++.++|    +++|+++...+. ..  +.+.+||+|||||.|||++..+
T Consensus       108 ~v~~~~dld~~~~~l----~~~G~~~~~~~~-~~--G~~~~~f~DPdG~~iel~~~~~  158 (338)
T 1zsw_A          108 LVPSEDSLHYWKERF----EKFDVKHSEMTT-YA--NRPALQFEDAEGLRLVLLVSNG  158 (338)
T ss_dssp             EESCHHHHHHHHHHH----HHTTCEECCSEE-ET--TEEEEEEECTTCCEEEEEECTT
T ss_pred             EcCCHHHHHHHHHHH----HHCCCccccccc-cC--CcEEEEEECCCCCEEEEEEcCC
Confidence            998   577777777    999999886554 32  2488999999999999999764

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.49  E-value=7.4e-13  Score=101.70  Aligned_cols=120  Identities=18%  Similarity=0.148  Sum_probs=78.4

Q ss_pred             ceeEEEEEEeCC--HHHHHHHHHhccCCEEEEEec-------cCCCceEEEEEecCCCCcceEEEeeecCCC-c-cccC-
Q 022835           22 RRFLHAVYRVGD--LDRTIKFYTECFGMKLLRKRD-------VPEEKYSNAFLGFGPEQSHFVVELTYNYGV-T-SYDI-   89 (291)
Q Consensus        22 ~~i~hv~i~v~d--~~~~~~FY~~~lG~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~-~-~~~~-   89 (291)
                      ..-.++.|.|+|  ++++++||+++|||++.....       .+.+......+..++  ..+  .+...... . +... 
T Consensus        23 ~~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g--~~l--~l~~~~~~~~~~~~~~   98 (166)
T 1xy7_A           23 FTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAG--SSF--VVCDVSSLPGFSTAKS   98 (166)
T ss_dssp             EEEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETT--EEE--EEEEGGGSTTCCCCCT
T ss_pred             CceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECC--eEE--EEeCCCcccCCccccC
Confidence            445788999999  999999999999999875431       111222223344432  222  22221100 0 1111 


Q ss_pred             -CCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccC--CCCceEEEEEECCCCCEEEEEEcCC
Q 022835           90 -GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        90 -~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                       +.+ .+++|.|+|+++++++|+++|++ ..++...  ++ .+ +++|+||+|+.|+|++...
T Consensus        99 ~~~g-~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~-~r-~~~v~DP~G~~~~l~~~~~  157 (166)
T 1xy7_A           99 EGSG-VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL-GF-KGKVTDPFGVTWIFAEKKT  157 (166)
T ss_dssp             TSCC-CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT-TE-EEEEECTTSCEEEEEC---
T ss_pred             CCCc-EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc-cE-EEEEECCCCCEEEEEeecC
Confidence             223 48999999999999999999999 8888877  77 44 4889999999999998753

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.48  E-value=3e-12  Score=96.47  Aligned_cols=124  Identities=15%  Similarity=0.151  Sum_probs=81.9

Q ss_pred             ceeEEEEEEeC-CHHHHHHHHHhccCCEEEEEeccCC------------CceEEEEEecCCCCcceEEEeeecCCCcccc
Q 022835           22 RRFLHAVYRVG-DLDRTIKFYTECFGMKLLRKRDVPE------------EKYSNAFLGFGPEQSHFVVELTYNYGVTSYD   88 (291)
Q Consensus        22 ~~i~hv~i~v~-d~~~~~~FY~~~lG~~~~~~~~~~~------------~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~   88 (291)
                      +++ +..|.|. |+++|++||+++||+++......++            +....+.+.+++  ..+  .+..........
T Consensus         3 m~~-~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~--~~l--~~~d~~~~~~~~   77 (149)
T 1u6l_A            3 LQI-VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGS--FAL--MASDNHPAYPYE   77 (149)
T ss_dssp             CEE-EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETT--EEE--EEEECCTTSCCC
T ss_pred             ceE-EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECC--EEE--EEEcCCCccCCC
Confidence            444 4788898 9999999999999999876432111            222223344432  222  222211100111


Q ss_pred             CCCCceEEEEEeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCCCCC
Q 022835           89 IGTGFGHFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEP  153 (291)
Q Consensus        89 ~~~~~~~i~~~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~~~  153 (291)
                      ...+ .+++|.|+|   +++++++|+ +|.+++.++...+||.+. .+++||+|+.|+|.+.....+.
T Consensus        78 ~~~g-~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r~-~~v~Dp~G~~w~l~~~~~~~~~  142 (149)
T 1u6l_A           78 GIKG-CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAASF-GMFTDRFGVAWMVNCEQDREGG  142 (149)
T ss_dssp             CCCS-EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEEE-EEEECTTSCEEEEEESCC----
T ss_pred             CCCc-eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccce-EEEECCCCCEEEEEEecccCCC
Confidence            2233 589999998   789999985 899999999999998654 7899999999999997765444

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.47  E-value=4.1e-13  Score=103.13  Aligned_cols=120  Identities=15%  Similarity=0.126  Sum_probs=77.8

Q ss_pred             CceeEeeeeCC--chhcHHHHHHhhCCeeeeee-------cCCCcceeEEEecccccccceeEeeccccCc-c-ccccC-
Q 022835          153 PLCQVMLRVGD--LGRSIKFYEKALGMKLLRTV-------DKPEYKYTLAMLGYAEEDQTTVLELTYNYGV-T-EYTKG-  220 (291)
Q Consensus       153 ~~~hv~l~v~d--~~~~~~fy~~~lG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~-~~~~~-  220 (291)
                      ...++.|.|.|  ++++.+||+++|||++....       ...++......+..+    +..+.+...... . +...+ 
T Consensus        24 ~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----g~~l~l~~~~~~~~~~~~~~~   99 (166)
T 1xy7_A           24 TEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKSE   99 (166)
T ss_dssp             EEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCTT
T ss_pred             ceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEEC----CeEEEEeCCCcccCCccccCC
Confidence            34678899999  99999999999999987543       111121222223321    222333221110 0 01110 


Q ss_pred             cceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccC--CCCCceEEEEECCCCceEEEecchh
Q 022835          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPI--PGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       221 ~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~--~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      ....|++|.|+|++++++++    +++|++ +.+|...  ++  +++++|+||+||.|+|++...
T Consensus       100 ~~g~~l~~~vdDvda~~~~l----~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~~  157 (166)
T 1xy7_A          100 GSGVTFLLGTKDAEAAVAKA----VDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKKT  157 (166)
T ss_dssp             SCCCEEEEECSCHHHHHHHH----HHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC---
T ss_pred             CCcEEEEEEcCCHHHHHHHH----HHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeecC
Confidence            23359999999999999999    999999 8888877  66  689999999999999998754

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.46  E-value=5.5e-13  Score=115.26  Aligned_cols=129  Identities=17%  Similarity=0.311  Sum_probs=90.9

Q ss_pred             CCCcceeEEEEEEeC--CHHHHHHHHHhccCCEEEEEec--cCCCceEEEEEecCCCCcceEEEeeecCCC---c---cc
Q 022835           18 KKDKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRD--VPEEKYSNAFLGFGPEQSHFVVELTYNYGV---T---SY   87 (291)
Q Consensus        18 ~~~~~~i~hv~i~v~--d~~~~~~FY~~~lG~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~---~---~~   87 (291)
                      ...+++|+||.|.|+  |++++.+||+++|||++.....  .+.......++..+++.  ..+.+......   .   .+
T Consensus       153 ~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~--~~l~l~~~~~~~~~~~~~~~  230 (357)
T 2r5v_A          153 DVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGA--VTLTLIEPDRNADPGQIDEF  230 (357)
T ss_dssp             TCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSC--CEEEEEEECTTSBCCHHHHH
T ss_pred             CCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCC--EEEEEeeecCCCCCchhHHH
Confidence            356899999999999  9999999999999999985532  22333445666544332  33444433211   1   01


Q ss_pred             ---cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCC-------------CCc---eEEEEEECCCCCEEEEEEcC
Q 022835           88 ---DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK-------------GGT---THIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        88 ---~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~-------------~g~---~~~~~~~dp~G~~iel~~~~  148 (291)
                         ..+.|++|+||.|+|+++++++|+++|+++...|....             ++.   ..++|++||+|++++|++.+
T Consensus       231 ~~~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~~  310 (357)
T 2r5v_A          231 LKDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTAS  310 (357)
T ss_dssp             HHHHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBCC
T ss_pred             HHhcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEccC
Confidence               14568999999999999999999999999877653210             100   01388999999999999865

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.44  E-value=4.4e-12  Score=106.62  Aligned_cols=169  Identities=11%  Similarity=0.080  Sum_probs=104.2

Q ss_pred             CceEEEEEeC-CHHHHHHHHHHcCCeeecCCccC--CCCceEEEEEECCCCCEEEEEEcC---CCCCCceeEeeeeCCch
Q 022835           92 GFGHFAIATE-DVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQRG---PTPEPLCQVMLRVGDLG  165 (291)
Q Consensus        92 ~~~~i~~~v~-di~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dp~G~~iel~~~~---~~~~~~~hv~l~v~d~~  165 (291)
                      ++..+.+.|. +=....+-+++.|++........  ..|.         +-..+++....   ..+....++.+.|.|++
T Consensus       125 g~~~i~~~v~~~N~~s~~ly~k~GF~~~g~~~~~~~~~g~---------d~~~~~l~~~~~~~~~~~~~~~~~l~v~D~~  195 (301)
T 2zw5_A          125 GLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPG---------PHEMVVLGKARAEEPLTTLAVITELPVRDVA  195 (301)
T ss_dssp             CCSEEEEEEESSCHHHHHHHHHTTCEEEEEEEECCTTSSS---------CEEEEEEEEESSCCSCEEEEEEEEEEESCHH
T ss_pred             CccEEEEEeCCCCHHHHHHHHHcCCcCcceehhhcccCCC---------CeEEEEEeHHHhhhhcccceeEEEEEeCCHH
Confidence            5666666663 22344566688898865431111  1111         11233333322   11233567889999999


Q ss_pred             hcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec-chHHHHHHHHHHH
Q 022835          166 RSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD-DVYKSAEVVNLVT  244 (291)
Q Consensus       166 ~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~-d~~~~~~~l~~~~  244 (291)
                      ++.+||+++|||++......+ +.+.  .+..++......+.+...    +...+....+++|.|+ |++++++++    
T Consensus       196 ~a~~FY~~~lG~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~dvd~~~~~~----  264 (301)
T 2zw5_A          196 ATLRLVEAALGARTAFAIGDP-PEFA--EAALTPWSAGPRFRLAAV----PGPGPVEPVRLHLDAAGTADSLHRRA----  264 (301)
T ss_dssp             HHHHHHHHHSCCEEEEEEETT-EEEE--EEESSSSSSSSEEEEEEC----CCSSCCCCCEEEEEEESCHHHHHHHH----
T ss_pred             HHHHHHHHhcCCeEeeecCCC-ccEE--EEEcCCCccccccccccC----CCcCCCCceEEEEEcCccHHHHHHHH----
Confidence            999999999999987443221 2222  333222100011111110    0011223568999999 999999999    


Q ss_pred             HHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          245 QELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       245 ~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      +++|+++..+|...++ +.+.++|+|||||+|||.++
T Consensus       265 ~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          265 VDAGARVDGPPVRRPW-GRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             HHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             HHcCCccccCcccCCC-cceEEEEECCCCCEEEeeCC
Confidence            9999999988877765 35889999999999999875

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.43  E-value=9.8e-13  Score=107.68  Aligned_cols=114  Identities=15%  Similarity=0.230  Sum_probs=79.6

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++|||++..+..   . .  +.+..++    ..+.+.....     .+.+..|++|.|
T Consensus        24 ~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~---~-~--~~L~~g~----~~l~l~~~~~-----~~~~~~hiaf~V   88 (252)
T 3pkv_A           24 MTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA---D-A--FTIQLGV----SQIQFRAAAD-----GTKPFYHIAINI   88 (252)
T ss_dssp             -CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS---S-E--EEEEETT----EEEEEEECCT-----TCCCCCEEEEEE
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC---C-E--EEEEeCC----EEEEEEECCC-----CCCCeeEEEEEe
Confidence            5689999999999999999999999999876532   1 1  3333222    3444433211     134689999998


Q ss_pred             cc--hHHHHHHHHHHHHHhCCeeccC-Ccc---CCCCCceEEEEECCCCceEEEecchhh
Q 022835          231 DD--VYKSAEVVNLVTQELGGKITRQ-PGP---IPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       231 ~d--~~~~~~~l~~~~~~~G~~~~~~-p~~---~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                      ++  ++++.++|    +++ +++..+ +..   ....+.+.+||+|||||+|||++.+..
T Consensus        89 ~~~dld~~~~rL----~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~~  143 (252)
T 3pkv_A           89 AANHFQEGKAWL----SGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQA  143 (252)
T ss_dssp             CTTCHHHHHHHH----TTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESSS
T ss_pred             cHHHHHHHHHHH----Hhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCCC
Confidence            64  66666666    888 887652 221   012347899999999999999997653

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.42  E-value=1.8e-11  Score=90.75  Aligned_cols=119  Identities=18%  Similarity=0.241  Sum_probs=81.1

Q ss_pred             ceeEEEEEEeC--CHHHHHHHHHhcc-CCEEEEEeccC------CCceEEEEEecCCCCcceEEEeeecCCCccccCCCC
Q 022835           22 RRFLHAVYRVG--DLDRTIKFYTECF-GMKLLRKRDVP------EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTG   92 (291)
Q Consensus        22 ~~i~hv~i~v~--d~~~~~~FY~~~l-G~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~   92 (291)
                      +++. ..|.+.  |+++|.+||+++| |+++......+      ++....+.+.+++  ..+.  +...........+ .
T Consensus         5 ~~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g--~~~~--~~~~~~~~~~~~~-~   78 (136)
T 1u7i_A            5 ARVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGD--QSVH--CIDSHVRHAFDFT-P   78 (136)
T ss_dssp             CEEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETT--EEEE--EEEESSCCSCCCC-T
T ss_pred             ccce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECC--EEEE--EECCCCCCCCCCC-C
Confidence            4555 667886  9999999999999 99987532211      1223333344432  2222  2111100111112 2


Q ss_pred             ceEEEEEeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           93 FGHFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        93 ~~~i~~~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ...++|.|+|   +++++++|+ +|.++..++...++|.+. .+++||+|+.|+|..+.
T Consensus        79 ~~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~-~~~~Dp~G~~w~l~~~~  135 (136)
T 1u7i_A           79 AFSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRF-AWLADRFGVSWQLNLAG  135 (136)
T ss_dssp             TEEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEE-EEEECTTSCEEEEEECC
T ss_pred             ceEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcceE-EEEECCCCCEEEEEecC
Confidence            3578999999   999999999 999999999999998664 78999999999998753

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.40  E-value=1.6e-11  Score=103.25  Aligned_cols=120  Identities=13%  Similarity=0.063  Sum_probs=83.7

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      ......++.+.|+|++++.+||+++|||++......+ +.  ...+..++......+.+...+.    ..+....+++|.
T Consensus       180 ~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  252 (301)
T 2zw5_A          180 LTTLAVITELPVRDVAATLRLVEAALGARTAFAIGDP-PE--FAEAALTPWSAGPRFRLAAVPG----PGPVEPVRLHLD  252 (301)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-EE--EEEEESSSSSSSSEEEEEECCC----SSCCCCCEEEEE
T ss_pred             cccceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-cc--EEEEEcCCCccccccccccCCC----cCCCCceEEEEE
Confidence            3445568899999999999999999999987543321 12  2344444311101111111110    112234578999


Q ss_pred             eC-CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835          100 TE-DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       100 v~-di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      |+ |+++++++++++|+++..+|...++|... ++|+||+||.|+|.++
T Consensus       253 v~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          253 AAGTADSLHRRAVDAGARVDGPPVRRPWGRSE-FVITLPEGHELTVSAP  300 (301)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEEECTTSCEE-EEEECTTSCEEEEEEC
T ss_pred             cCccHHHHHHHHHHcCCccccCcccCCCcceE-EEEECCCCCEEEeeCC
Confidence            98 99999999999999998888888877654 8899999999999885

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.36  E-value=1.1e-11  Score=93.38  Aligned_cols=117  Identities=17%  Similarity=0.147  Sum_probs=75.7

Q ss_pred             eEeeeeC-CchhcHHHHHHhhCCeeeeeecCCC------------cceeEEEecccccccceeEeeccccCccccccCcc
Q 022835          156 QVMLRVG-DLGRSIKFYEKALGMKLLRTVDKPE------------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNA  222 (291)
Q Consensus       156 hv~l~v~-d~~~~~~fy~~~lG~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~  222 (291)
                      ...|.|. |.+++.+||+++||+++.......+            +....+.+..+    +..+-+....+....+...+
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~l~~~d~~~~~~~~~~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPAYPYEGIKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTTSCCCCCCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEEC----CEEEEEEcCCCccCCCCCCc
Confidence            4678888 9999999999999999875421111            22112223321    12222222111000111223


Q ss_pred             eeeEEEEecc---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          223 YAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       223 ~~h~~f~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                       .+++|.|+|   ++++.++|    + +|++++.+|...++ +.++++|+||+|+.|+|++...
T Consensus        82 -~~l~~~v~d~~evd~~~~~l----~-~Gg~i~~p~~~~~w-G~r~~~v~Dp~G~~w~l~~~~~  138 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNAL----A-EGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCEQD  138 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHH----H-TTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEESCC
T ss_pred             -eEEEEEcCCHHHHHHHHHHH----H-CCCEEeecccccCc-ccceEEEECCCCCEEEEEEecc
Confidence             689999999   55555555    6 79999999998887 4588999999999999998644

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.35  E-value=1.3e-11  Score=91.49  Aligned_cols=115  Identities=14%  Similarity=0.114  Sum_probs=76.4

Q ss_pred             EeeeeC--CchhcHHHHHHhh-CCeeeee--ecC----CCcceeEEEecccccccceeEeeccccCccccccCcceeeEE
Q 022835          157 VMLRVG--DLGRSIKFYEKAL-GMKLLRT--VDK----PEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVA  227 (291)
Q Consensus       157 v~l~v~--d~~~~~~fy~~~l-G~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~  227 (291)
                      ..|.+.  |.+++.+||+++| |+++...  ...    .++......+..++    ..+-+......+... ......++
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g----~~~~~~~~~~~~~~~-~~~~~~l~   83 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGD----QSVHCIDSHVRHAFD-FTPAFSFF   83 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETT----EEEEEEEESSCCSCC-CCTTEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECC----EEEEEECCCCCCCCC-CCCceEEE
Confidence            567776  9999999999999 9998752  111    11222222233221    222221111001111 12346899


Q ss_pred             EEecc---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          228 ISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       228 f~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      |.|+|   ++++.+++    . +|+++..+|...++ +.++++|+||+|+.|+|+.+.
T Consensus        84 ~~v~d~~evd~~~~~l----~-~Gg~v~~p~~~~~~-G~~~~~~~Dp~G~~w~l~~~~  135 (136)
T 1u7i_A           84 VDCESNAQIERLAEAL----S-DGGKALMPLGDYGF-SQRFAWLADRFGVSWQLNLAG  135 (136)
T ss_dssp             EECCCHHHHHHHHHHH----H-TTSEEEEEEECCSS-SSEEEEEECTTSCEEEEEECC
T ss_pred             EEcCCHHHHHHHHHHH----H-cCCEEecccccCCC-cceEEEEECCCCCEEEEEecC
Confidence            99999   88888888    8 99999999998887 468999999999999998753

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.31  E-value=6.4e-11  Score=87.85  Aligned_cols=118  Identities=12%  Similarity=0.170  Sum_probs=80.4

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhcc-CCEEEEEeccC------CCceEEEEEecCCCCcceEEEeeecCCCccccCCCCc
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECF-GMKLLRKRDVP------EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGF   93 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~l-G~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~   93 (291)
                      ++++....+.+.|.++|++||+++| |+++.......      ++....+.+.+++  ..+++  ... ... .  +.. 
T Consensus         3 ~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~--~~~m~--~d~-~~~-~--~~~-   73 (139)
T 1tsj_A            3 IPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG--QVFMA--IDA-NSG-T--ELP-   73 (139)
T ss_dssp             CCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT--EEEEE--EC-----------C-
T ss_pred             CCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECC--EEEEE--ECC-CCC-C--Cce-
Confidence            4566666666679999999999999 99987532221      1233334455442  12211  111 110 1  112 


Q ss_pred             eEEEEEeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           94 GHFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        94 ~~i~~~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      ..+++.|+|   +++++++|. +|.+++.++...+||.+. .+++||+|+.|+|.....
T Consensus        74 ~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~-g~v~Dp~G~~W~i~~~~~  130 (139)
T 1tsj_A           74 ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREF-AWVQDKFGVSFQLALPEE  130 (139)
T ss_dssp             CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEE-EEEECTTSCEEEEEECC-
T ss_pred             EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceE-EEEECCCCCEEEEeeccc
Confidence            568889987   788899998 799999999999998765 899999999999998664

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.26  E-value=2.5e-11  Score=105.58  Aligned_cols=124  Identities=17%  Similarity=0.218  Sum_probs=89.2

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCc--ceeEEEecccccccceeEeeccccCccc----------cc
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGVTE----------YT  218 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~----------~~  218 (291)
                      ..+++|+.+.|+|++++.+||+++|||++..+.....+  ......++.+    ...+++.....+..          ..
T Consensus        20 i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~   95 (381)
T 1t47_A           20 VKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVAE   95 (381)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC----CEEEEEecCCCCCCcchhHHHHHHHh
Confidence            46899999999999999999999999998876321111  1233444422    34566654311111          11


Q ss_pred             cCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCC-C-CCceEEEEECCCCceEEEecch
Q 022835          219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIP-G-LNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       219 ~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~-~-~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      .++++.|++|.|+|++++.+++    +++|+++..+|.... + +..+.++++||+|+.++|+++.
T Consensus        96 ~g~gv~~iaf~V~D~~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~  157 (381)
T 1t47_A           96 HGDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  157 (381)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             cCCceEEEEEEECCHHHHHHHH----HHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecC
Confidence            3568999999999999999999    999999988776421 1 1235788999999999999874

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.21  E-value=1.1e-09  Score=83.69  Aligned_cols=121  Identities=17%  Similarity=0.167  Sum_probs=83.4

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccC--------------CCceEEEEEecCCCCcceEEEeeecCCCcc
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--------------EEKYSNAFLGFGPEQSHFVVELTYNYGVTS   86 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~--------------~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~   86 (291)
                      ++.-....|.++|.++|++||+++||+++.......              .+....+.+.+++  ..  +.+....+. .
T Consensus        23 mm~~i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g--~~--lm~~D~~g~-~   97 (172)
T 3l20_A           23 YMTALFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLG--VK--VLCSDSFGR-A   97 (172)
T ss_dssp             CCCEEEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETT--EE--EEEEECTTC-C
T ss_pred             ecCcEEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECC--EE--EEEECCCCC-C
Confidence            333345667777999999999999999987653331              2334455566642  22  323332111 1


Q ss_pred             ccCCCCceEEEEEe--------CCHHHHHHHHHHcC-CeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           87 YDIGTGFGHFAIAT--------EDVYKLVENIRAKG-GNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        87 ~~~~~~~~~i~~~v--------~di~~~~~~l~~~G-~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +..+.+ ..+++.+        +|+++++++|.+.| +++..++...+||.+. ..++||+|+.|+|....
T Consensus        98 ~~~~~~-~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~-g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A           98 DKINNG-ISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKM-GVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             CCCCSS-EEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEE-EEEECTTSCEEEEEEEC
T ss_pred             CCCCCc-EEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEE-EEEECCCCCEEEEEeCC
Confidence            122223 3566666        57899999999999 7999999999998765 78999999999997654

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.19  E-value=1.2e-10  Score=100.53  Aligned_cols=128  Identities=15%  Similarity=0.165  Sum_probs=85.6

Q ss_pred             CCcceeEEEEEEeC--CHHHHHHHHHhccCCEEEEEeccCC--CceEEEEEecCCCCcceEEEeeec-CC-Ccc------
Q 022835           19 KDKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPE--EKYSNAFLGFGPEQSHFVVELTYN-YG-VTS------   86 (291)
Q Consensus        19 ~~~~~i~hv~i~v~--d~~~~~~FY~~~lG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~l~~~~~-~~-~~~------   86 (291)
                      ..+.+|+||.+.|+  |++++.+||+++|||+.......+.  .+....++....+.  ..+++..+ .. ..+      
T Consensus       154 ~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~--~~i~L~~~~~~~~~~~~~~~~  231 (357)
T 1cjx_A          154 AGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGM--IRIPLNEESSKGAGQIEEFLM  231 (357)
T ss_dssp             TSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSS--CEEEEEEECTTCCSHHHHHHH
T ss_pred             CCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCC--EEEEEeeecCCCCChHHHhHH
Confidence            56899999999999  9999999999999999876644322  22212222222222  33444433 11 111      


Q ss_pred             ccCCCCceEEEEEeCCHHHHHHHHHHcCCeeec-CCc---------cCCCCce-------EEEEEEC----CCCCEEEEE
Q 022835           87 YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTR-EPG---------PLKGGTT-------HIAFVKD----PDGYIFELI  145 (291)
Q Consensus        87 ~~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~-~~~---------~~~~g~~-------~~~~~~d----p~G~~iel~  145 (291)
                      ...+.|++|+||.|+|+++++++|+++|+++.. .|.         ....+..       ..++-+|    |+|+++++.
T Consensus       232 ~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqif  311 (357)
T 1cjx_A          232 QFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIF  311 (357)
T ss_dssp             HHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEE
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEe
Confidence            124678999999999999999999999999876 551         1111110       0255677    889999988


Q ss_pred             EcC
Q 022835          146 QRG  148 (291)
Q Consensus       146 ~~~  148 (291)
                      ..+
T Consensus       312 t~~  314 (357)
T 1cjx_A          312 SET  314 (357)
T ss_dssp             BCC
T ss_pred             ccC
Confidence            765

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.18  E-value=9.8e-11  Score=102.89  Aligned_cols=124  Identities=15%  Similarity=0.114  Sum_probs=88.2

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCC--CcceeEEEecccccccceeEeeccccCcc--------------
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--EYKYTLAMLGYAEEDQTTVLELTYNYGVT--------------  215 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--------------  215 (291)
                      .+++||.|.|+|++++.+||+++|||++..+....  ...+..+.++.+    ...+.+.....+.              
T Consensus        24 ~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g----~~~l~L~~~~~~~~~~~~~~~~~~~p~   99 (424)
T 1sqd_A           24 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG----DLRFLFTAPYSPSLSAGEIKPTTTASI   99 (424)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET----TEEEEEEEECCGGGTTTCCGGGCCCSS
T ss_pred             CeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC----CEEEEEecCCCCccccccccccccccc
Confidence            36899999999999999999999999987664322  112333444421    3445554432110              


Q ss_pred             -----c------cccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhh
Q 022835          216 -----E------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       216 -----~------~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                           +      ...++++.|++|.|+|++++.+++    +++|++++.+|....+ ..+...+++|+|+.++|+++...
T Consensus       100 ~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l----~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~  174 (424)
T 1sqd_A          100 PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAE  174 (424)
T ss_dssp             TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC
T ss_pred             ccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHH----HHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCC
Confidence                 0      123468999999999999999999    9999999988865432 24667788888888888876543

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.16  E-value=4.5e-10  Score=97.24  Aligned_cols=103  Identities=19%  Similarity=0.258  Sum_probs=74.8

Q ss_pred             CCCCcceeEEEEEEeCC--HHHHHHHHHhccCCEEEEEec---c--CCCceEEEEEecCCCCcceEEEeeecCC---Cc-
Q 022835           17 PKKDKRRFLHAVYRVGD--LDRTIKFYTECFGMKLLRKRD---V--PEEKYSNAFLGFGPEQSHFVVELTYNYG---VT-   85 (291)
Q Consensus        17 ~~~~~~~i~hv~i~v~d--~~~~~~FY~~~lG~~~~~~~~---~--~~~~~~~~~l~~~~~~~~~~l~~~~~~~---~~-   85 (291)
                      +...+.+|+||++.|+|  ++++.+||+++|||+.....+   .  +..+.+...+..+++..  .+++..+..   .. 
T Consensus       167 ~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v--~i~L~ep~~~~~~s~  244 (393)
T 3isq_A          167 PKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESI--KMPINEPAPGKKKSQ  244 (393)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSC--EEEEEEEECCSBCCH
T ss_pred             CCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCE--EEEEecCCCCCCCCH
Confidence            34568999999999998  999999999999999876543   1  22344455554333333  344443321   11 


Q ss_pred             --cc---cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCC
Q 022835           86 --SY---DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP  121 (291)
Q Consensus        86 --~~---~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~  121 (291)
                        .+   ..|.|++|+||.|+|+.+++++|+++|+++...|
T Consensus       245 I~~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P  285 (393)
T 3isq_A          245 IQEYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVP  285 (393)
T ss_dssp             HHHHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             HHHHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCC
Confidence              11   2588999999999999999999999999987655

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.13  E-value=2.8e-09  Score=78.76  Aligned_cols=114  Identities=11%  Similarity=0.191  Sum_probs=77.5

Q ss_pred             EEEEeC-CHHHHHHHHHhccC-CEEEEEecc------CCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           27 AVYRVG-DLDRTIKFYTECFG-MKLLRKRDV------PEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        27 v~i~v~-d~~~~~~FY~~~lG-~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      ..|.++ |.++|++||+++|| .++......      +.+....+.+.+++  ..  +.+........+..+. ...+++
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g--~~--lm~~d~~~~~~~~~~~-~~~l~l   87 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNG--QE--FMCIDSYVNHNFTFTP-AMSLYV   87 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETT--EE--EEEEECSSCCSCCCCT-TSCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECC--EE--EEEEcCCCCCCCCCCC-CEEEEE
Confidence            456667 89999999999999 566543211      23445556666643  22  2222211111111222 346899


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      .|+|   +++++++|. +|.++..++...+||.+. ..++||+|+.|.|...
T Consensus        88 ~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~~-~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           88 TCETEEEIDTVFHKLA-QDGAILMPLGSYPFSKKF-GWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             EESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEE-EEEECTTSCEEEEEEC
T ss_pred             EcCCHHHHHHHHHHHH-cCCeEecCcccccCCcEE-EEEECCCCCEEEEEeC
Confidence            9999   999999995 688999999999998764 8899999999998754

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.12  E-value=1e-09  Score=81.30  Aligned_cols=118  Identities=9%  Similarity=0.060  Sum_probs=71.1

Q ss_pred             ceeEeeeeCCchhcHHHHHHhh-CCeeeeeecCC------CcceeEEEecccccccceeEeeccccCccccccCcceeeE
Q 022835          154 LCQVMLRVGDLGRSIKFYEKAL-GMKLLRTVDKP------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV  226 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~l-G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~  226 (291)
                      +...-+.+.|.+++.+||+++| |+++.......      ++....+.+..++   ...+.. . ..+ ..  +.. ..+
T Consensus         6 i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~---~~~m~~-d-~~~-~~--~~~-~sl   76 (139)
T 1tsj_A            6 ITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG---QVFMAI-D-ANS-GT--ELP-ISL   76 (139)
T ss_dssp             EEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT---EEEEEE-C-----------C-CCE
T ss_pred             eeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECC---EEEEEE-C-CCC-CC--Cce-EEE
Confidence            3434344459999999999999 99987432111      1222222233221   111111 1 111 11  112 678


Q ss_pred             EEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       227 ~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      ++.|+| .+.++++..++. .|++++.+|...++ +.++++|+||+|+.|+|.....
T Consensus        77 ~~~~~d-~~evd~~~~~l~-~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~~~  130 (139)
T 1tsj_A           77 FVTVKD-TIEMERLFNGLK-DEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALPEE  130 (139)
T ss_dssp             EEECSS-HHHHHHHHHHHH-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEECC-
T ss_pred             EEECCC-HHHHHHHHHHHh-CCCEEeecccccCC-CceEEEEECCCCCEEEEeeccc
Confidence            999988 233333333437 79999999999887 5689999999999999987543

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.05  E-value=2.1e-09  Score=94.32  Aligned_cols=102  Identities=20%  Similarity=0.325  Sum_probs=74.2

Q ss_pred             CCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCC-----CceEEEEEecCCCCcceEEEeeecC----CCc---
Q 022835           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----EKYSNAFLGFGPEQSHFVVELTYNY----GVT---   85 (291)
Q Consensus        18 ~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~l~~~~~~----~~~---   85 (291)
                      ...+.+|+||++.|+|++++.+||+++|||++......++     .+....++..+++.  +.+++..+.    ...   
T Consensus       194 ~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~--i~l~l~e~~~~~~~~s~i~  271 (418)
T 1sp8_A          194 DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSEN--VLLPLNEPVHGTKRRSQIQ  271 (418)
T ss_dssp             CCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSC--CEEEEEEECCCSSSCCHHH
T ss_pred             CCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCc--EEEEEeecccccCCCcchh
Confidence            3568999999999999999999999999999987654322     23455666544333  344444332    111   


Q ss_pred             cc---cCCCCceEEEEEeCCHHHHHHHHHH----cCCeeecCC
Q 022835           86 SY---DIGTGFGHFAIATEDVYKLVENIRA----KGGNVTREP  121 (291)
Q Consensus        86 ~~---~~~~~~~~i~~~v~di~~~~~~l~~----~G~~~~~~~  121 (291)
                      .+   ..|.|++|+||.|+|+.+++++|++    +|+++...|
T Consensus       272 ~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          272 TFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             HHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             hhhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence            11   2577999999999999999999999    799987654

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.03  E-value=2.4e-09  Score=79.09  Aligned_cols=114  Identities=14%  Similarity=0.117  Sum_probs=71.7

Q ss_pred             EeeeeC-CchhcHHHHHHhhC-Ceeeee--ec----CCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEE
Q 022835          157 VMLRVG-DLGRSIKFYEKALG-MKLLRT--VD----KPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       157 v~l~v~-d~~~~~~fy~~~lG-~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f  228 (291)
                      ..|.+. |.+++.+||+++|| .++...  ..    ..++...-+.+..+    +..+-+...........+ ....+++
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~----g~~lm~~d~~~~~~~~~~-~~~~l~l   87 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLN----GQEFMCIDSYVNHNFTFT-PAMSLYV   87 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEECSSCCSCCCC-TTSCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEEEcCCCCCCCCCC-CCEEEEE
Confidence            446666 89999999999999 565432  11    11222222333322    222322221111111122 3468999


Q ss_pred             Eecc---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          229 STDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       229 ~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      .|+|   ++++.++|    . .|++++.+|...++ +.++++++||+|+.|+|...
T Consensus        88 ~~~d~~evd~~~~~l----~-~Gg~v~~p~~~~~w-g~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           88 TCETEEEIDTVFHKL----A-QDGAILMPLGSYPF-SKKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             EESSHHHHHHHHHHH----H-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEEC
T ss_pred             EcCCHHHHHHHHHHH----H-cCCeEecCcccccC-CcEEEEEECCCCCEEEEEeC
Confidence            9999   55555555    5 58899999998887 46899999999999999754

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=98.99  E-value=4.8e-09  Score=80.13  Aligned_cols=117  Identities=13%  Similarity=0.092  Sum_probs=74.4

Q ss_pred             eeEeeeeCCchhcHHHHHHhhCCeeeeeecCC--------------CcceeEEEecccccccceeEeeccccCccccccC
Q 022835          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--------------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKG  220 (291)
Q Consensus       155 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~  220 (291)
                      ....|.+.|.++|.+||+++||.++.......              ++..--+.+..+    +..+-+...... .+..+
T Consensus        27 i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~----g~~lm~~D~~g~-~~~~~  101 (172)
T 3l20_A           27 LFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL----GVKVLCSDSFGR-ADKIN  101 (172)
T ss_dssp             EEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET----TEEEEEEECTTC-CCCCC
T ss_pred             EEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC----CEEEEEECCCCC-CCCCC
Confidence            34457777999999999999999976543321              122222333322    222322221111 11222


Q ss_pred             cceeeEEEEe--------cchHHHHHHHHHHHHHhC-CeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          221 NAYAQVAIST--------DDVYKSAEVVNLVTQELG-GKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       221 ~~~~h~~f~v--------~d~~~~~~~l~~~~~~~G-~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                       +...+++.+        +|++++.++|    .+.| ++++.+|...++ +.++++|+||+|+.|+|...+
T Consensus       102 -~~~sl~l~~~~~d~~~~~dvd~~~~~l----~~~G~a~v~~p~~~~~w-G~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          102 -NGISLLIDYDVNNKEDADKVEAFYEQI----KDHSSIEIELPFADQFW-GGKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             -SSEEEEEEEETTCHHHHHHHHHHHHHH----TTCTTCEEEEEEEECTT-SSEEEEEECTTSCEEEEEEEC
T ss_pred             -CcEEEEEEEccCccCcHHHHHHHHHHH----HhCCCceEecCccccCC-CcEEEEEECCCCCEEEEEeCC
Confidence             224566666        4566666666    9999 699999988887 468999999999999997643

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=98.95  E-value=6.9e-09  Score=82.35  Aligned_cols=116  Identities=17%  Similarity=0.154  Sum_probs=74.1

Q ss_pred             ceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeE---EEEe
Q 022835          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV---AIST  230 (291)
Q Consensus       154 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~---~f~v  230 (291)
                      .....|+|.|.+++.+||+++|||++.....      ..+.++..+  ....+.+-..+.... ....|.-|+   ++.|
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~--~~~~L~lEEsp~~~~-~~~~Glkh~a~i~i~v   81 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQT--GLEKLVLEEAPSMRT-RKVEGRKKLARLIVKV   81 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTT--CCEEEEEEECCTTTC-BCCCSSCSEEEEEEEE
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCC--CcceEEEEeCCCccc-ccccccceeeeEEEEc
Confidence            4557799999999999999999999876532      345555322  233344433221111 122366666   6999


Q ss_pred             cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhHH
Q 022835          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~~  286 (291)
                      +| .+.++.+    ..++.++-.. +  .+..++.+|+.||+||.|||+.+.+.-+
T Consensus        82 p~-~~el~~l----L~~~~~~~~~-~--~gdhgyA~yl~dPEGn~ieiyae~d~~~  129 (244)
T 3e0r_A           82 EN-PLEIEGI----LSKTDSIHRL-Y--KGQNGYAFEIFSPEDDLILIHAEDDIAS  129 (244)
T ss_dssp             SS-HHHHHHH----HTTCSCCSEE-E--ECSSSEEEEEECTTCCEEEEECCSCGGG
T ss_pred             CC-HHHHHHH----Hhcccccccc-c--ccCCcEEEEEECCCCCeEEEEEcCCHHH
Confidence            99 5555555    4555544221 1  1123467999999999999999887654

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.62  E-value=4e-06  Score=68.80  Aligned_cols=155  Identities=14%  Similarity=0.125  Sum_probs=100.0

Q ss_pred             CCCCCcceeEEEEEEeCCHHHHHHHHHhccC-----CEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCC-------
Q 022835           16 WPKKDKRRFLHAVYRVGDLDRTIKFYTECFG-----MKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG-------   83 (291)
Q Consensus        16 ~~~~~~~~i~hv~i~v~d~~~~~~FY~~~lG-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-------   83 (291)
                      .-..|+.+++|+.+.|++++        .||     |++......+..+..-..+.++.    ..||+.....       
T Consensus        17 ~~~~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg----~YLElIai~~~~~~~~~   84 (274)
T 3p8a_A           17 RGSHMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINE----NYIELLDVENNEKLKKM   84 (274)
T ss_dssp             ----CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSS----SEEEEEEESCHHHHHHH
T ss_pred             CCcCccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCC----EEEEEEeecCccccccc
Confidence            33457899999999999884        367     98877666665555555555532    2344332111       


Q ss_pred             ----Cc--cc-------cCCCCceEEEEEeCCHHHHHHHHHHcCCeeec---CCccCCCCc---eEEEEEECCC--CC-E
Q 022835           84 ----VT--SY-------DIGTGFGHFAIATEDVYKLVENIRAKGGNVTR---EPGPLKGGT---THIAFVKDPD--GY-I  141 (291)
Q Consensus        84 ----~~--~~-------~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~---~~~~~~~g~---~~~~~~~dp~--G~-~  141 (291)
                          ..  .+       ..++|+.++|++++|+++..+++.++|+.+..   -.+..++|.   +.+++..|+.  +. +
T Consensus        85 ~~~~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~d~~~~~~~~  164 (274)
T 3p8a_A           85 AKTIEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKP  164 (274)
T ss_dssp             TTSTGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEEEEEEEECCCC--CEEEEEEEEECSSCCSSCC
T ss_pred             ccccCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCCCccccccCCCCCEEEEEEEeccCCCccCCCc
Confidence                01  11       24679999999999999999999999987532   123345553   3334456654  22 2


Q ss_pred             EEEEEcC-C----------CC---CCceeEeeeeCCchhcHHHHHHhhCCeeeee
Q 022835          142 FELIQRG-P----------TP---EPLCQVMLRVGDLGRSIKFYEKALGMKLLRT  182 (291)
Q Consensus       142 iel~~~~-~----------~~---~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~  182 (291)
                      --|++-. +          ++   ..+.++.+.+.|++++.+.|++.||......
T Consensus       165 PFfiqw~~~~~~r~~~~~~HpnGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~  219 (274)
T 3p8a_A          165 PFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEE  219 (274)
T ss_dssp             CEEEEESSCTTHHHHHHTTTCCTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEE
T ss_pred             cEEEecCCCccccccccccCCCccceEEEEEEEeCCHHHHHHHHHHHhCCCcccc
Confidence            1234322 1          22   3589999999999999999999999998654

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.23  E-value=5e-05  Score=57.18  Aligned_cols=131  Identities=15%  Similarity=0.157  Sum_probs=85.5

Q ss_pred             EEEEeC-CHHHHHHHHHhcc-CCEEEEEecc-------CCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEE
Q 022835           27 AVYRVG-DLDRTIKFYTECF-GMKLLRKRDV-------PEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        27 v~i~v~-d~~~~~~FY~~~l-G~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~   97 (291)
                      ..|..+ |.+++.+||+++| |.++......       +++....+-+.+++.  .+.  +.... + .+....+ ..++
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~--~~m--~~d~~-p-~~~~~~~-~sl~   81 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGI--PCL--GLNGG-P-AFRHSEA-FSFQ   81 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTE--EEE--EEECC-T-TCCCCTT-EEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCE--EEE--EECCC-C-CcCCCCc-eEEE
Confidence            445666 9999999999999 9998753221       124455566666532  222  22211 1 2222223 3678


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCCCCCceeEeeeeCCchhcHHHHHHh
Q 022835           98 IATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKA  174 (291)
Q Consensus        98 ~~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~~~~~hv~l~v~d~~~~~~fy~~~  174 (291)
                      +.|+|   +++.+++|.++|.++.      ..     ..++||.|+.|.|....-      .--+.-+|++++.+.++..
T Consensus        82 v~~~d~~e~d~~~~~L~~~Gg~v~------~~-----G~v~D~fGv~W~i~~~~~------~~~~~d~d~~~~~r~~~am  144 (163)
T 1u69_A           82 VATDDQAETDRLWNAIVDNGGEES------AC-----GWCRDKWGISWQITPRVL------SEAIASPDRAAARRAFEAM  144 (163)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCEEC------ST-----TEEECTTSCEEEEEEHHH------HHHHTCSSHHHHHHHHHHH
T ss_pred             EEeCCHHHHHHHHHHHHhCCCEEE------EE-----EEEECCCCCEEEEEeEch------HHhccCCCHHHHHHHHHHH
Confidence            88887   6778899988898866      22     247999999999875430      0112347889999999999


Q ss_pred             hCCeeee
Q 022835          175 LGMKLLR  181 (291)
Q Consensus       175 lG~~~~~  181 (291)
                      |+++..+
T Consensus       145 ~~m~k~d  151 (163)
T 1u69_A          145 MTMGRID  151 (163)
T ss_dssp             TTCSSCC
T ss_pred             HCCccee
Confidence            9997543

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=97.92  E-value=0.00014  Score=54.71  Aligned_cols=105  Identities=11%  Similarity=0.021  Sum_probs=61.9

Q ss_pred             eeeeC-CchhcHHHHHHhh-CCeeeee--ecC----C-CcceeEEEecccccccceeEeeccccCccccccCcceeeEEE
Q 022835          158 MLRVG-DLGRSIKFYEKAL-GMKLLRT--VDK----P-EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       158 ~l~v~-d~~~~~~fy~~~l-G~~~~~~--~~~----~-~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f  228 (291)
                      .|... |.+++.+||+++| |.++...  ...    + ++..--+.+..++    ..+-+....  +.... .....+.+
T Consensus        10 yL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g----~~~m~~d~~--p~~~~-~~~~sl~v   82 (163)
T 1u69_A           10 CLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG----IPCLGLNGG--PAFRH-SEAFSFQV   82 (163)
T ss_dssp             EEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETT----EEEEEEECC--TTCCC-CTTEEEEE
T ss_pred             EEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECC----EEEEEECCC--CCcCC-CCceEEEE
Confidence            35555 9999999999999 9987642  211    1 2222222233221    222222111  11111 22347888


Q ss_pred             EecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          229 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       229 ~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      .++| .+.+++++.+|.+.|+++.           ++.+++||.|+.|.|...
T Consensus        83 ~~~d-~~e~d~~~~~L~~~Gg~v~-----------~~G~v~D~fGv~W~i~~~  123 (163)
T 1u69_A           83 ATDD-QAETDRLWNAIVDNGGEES-----------ACGWCRDKWGISWQITPR  123 (163)
T ss_dssp             EESS-HHHHHHHHHHHHHTTCEEC-----------STTEEECTTSCEEEEEEH
T ss_pred             EeCC-HHHHHHHHHHHHhCCCEEE-----------EEEEEECCCCCEEEEEeE
Confidence            8888 4455555555577898876           223799999999999764

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.50  E-value=0.00047  Score=65.10  Aligned_cols=121  Identities=17%  Similarity=0.211  Sum_probs=74.1

Q ss_pred             CcceeEEEEEEeC---CHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeec--CC-----------
Q 022835           20 DKRRFLHAVYRVG---DLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN--YG-----------   83 (291)
Q Consensus        20 ~~~~i~hv~i~v~---d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~--~~-----------   83 (291)
                      .+.+...+.+...   .+++++.||++.++++....   .+......+|.  +......+.+...  ..           
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (941)
T 3opy_B            6 LFNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKN---SNQKLFWLQLE--EDQNNVSIQLILDPEHAASVSQIDQNIR   80 (941)
T ss_dssp             CSCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSS---CSCCC---EEC--CTTSCCEEEEECSSCSCHHHHHHHHHHH
T ss_pred             eecceeEEEEEeCCHHHHHHHHHHHHhhccceeccc---cCCcceeEEEe--cCCCeEEEEEEeccccchhHHHHHHHHh
Confidence            4677777777654   67899999999999976432   22212233443  2233344443322  11           


Q ss_pred             -C-----ccccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           84 -V-----TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        84 -~-----~~~~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                       .     ..-+.+.. .|++|.+.|++++.+.|.+.+..+...|.+..  ... +|+.||+||+|+|.+...
T Consensus        81 ~~~~~~~~~dW~~~~-~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~--~~e-~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           81 NLTRSLYRKDWRSIQ-SNIAFKSSSLSKLVKLLKDGGHPVQQSPNEIS--PFE-VYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             CCC----------CC-CEEEEEESCHHHHHHHHHTTTCCCBCSSSSCS--CEE-ECCSSCCEEEECC-CCSS
T ss_pred             hhhcccccccccccC-ceEEEEeCCHHHHHHHHHhcCCccccCCCcCC--Cce-EEeECCCCCEEEEeccCC
Confidence             0     01122322 39999999999999999999987665544332  333 889999999999998764

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.24  E-value=0.00072  Score=63.85  Aligned_cols=111  Identities=17%  Similarity=0.200  Sum_probs=66.3

Q ss_pred             CCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccc-cCcc-----------------ccccCcce
Q 022835          162 GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYN-YGVT-----------------EYTKGNAY  223 (291)
Q Consensus       162 ~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-~~~~-----------------~~~~~~~~  223 (291)
                      .-++++.+||.+.|++......   +.......+....  ....+++... .+..                 ...+....
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dW~~~~   95 (941)
T 3opy_B           21 SLLQASIDFYTNFLGFAIRKNS---NQKLFWLQLEEDQ--NNVSIQLILDPEHAASVSQIDQNIRNLTRSLYRKDWRSIQ   95 (941)
T ss_dssp             CC-HHHHHHHHHTTCCEECSSC---SCCC---EECCTT--SCCEEEEECSSCSCHHHHHHHHHHHCCC----------CC
T ss_pred             HHHHHHHHHHHhhccceecccc---CCcceeEEEecCC--CeEEEEEEeccccchhHHHHHHHHhhhhcccccccccccC
Confidence            4578999999999999765422   2111122232111  2334443322 1110                 00111123


Q ss_pred             eeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhh
Q 022835          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       224 ~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                      .|++|.+.|++++.+.|    .+.+.++-..|....   ...+|..||+||.|+|.+.+..
T Consensus        96 ~~l~f~~~dL~~~~~~L----~~~~~~~Q~~ps~~~---~~e~yt~DPlGNvIgfs~~~~~  149 (941)
T 3opy_B           96 SNIAFKSSSLSKLVKLL----KDGGHPVQQSPNEIS---PFEVYTVDPLGSLIGFSGFKNP  149 (941)
T ss_dssp             CEEEEEESCHHHHHHHH----HTTTCCCBCSSSSCS---CEEECCSSCCEEEECC-CCSSS
T ss_pred             ceEEEEeCCHHHHHHHH----HhcCCccccCCCcCC---CceEEeECCCCCEEEEeccCCc
Confidence            49999999999999999    888887655555432   3678999999999999887753

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=93.81  E-value=0.55  Score=38.25  Aligned_cols=89  Identities=12%  Similarity=0.113  Sum_probs=56.3

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcc--eeEEEecccccccceeEeeccccCcc-------------
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK--YTLAMLGYAEEDQTTVLELTYNYGVT-------------  215 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~~~~-------------  215 (291)
                      ..+++|+.+.|+++++..  |.. .+|++.........+  -.++.+.      +..||+....+..             
T Consensus        22 ~~~lDHlVi~v~~l~~lG--~~~-~~f~~~~GG~H~~~GT~N~Li~fd------g~YLElIai~~~~~~~~~~~~~~~~~   92 (274)
T 3p8a_A           22 ILKFDHIIHYIDQLDRFS--FPG-DVIKLHSGGYHHKYGTFNKLGYIN------ENYIELLDVENNEKLKKMAKTIEGGV   92 (274)
T ss_dssp             CCEEEEEEEECTTGGGCC--CGG-GSSCCEEEEEETTTTEEEEEEECS------SSEEEEEEESCHHHHHHHTTSTGGGT
T ss_pred             cccCCEEEEEeccHHHcC--Ccc-ceEEeCCCccCCCCCCEEEEEeeC------CEEEEEEeecCcccccccccccCccc
Confidence            457999999999885432  111 228776643322212  2444442      4567775432211             


Q ss_pred             c-------cccCcceeeEEEEecchHHHHHHHHHHHHHhCCeec
Q 022835          216 E-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  252 (291)
Q Consensus       216 ~-------~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~  252 (291)
                      .       ...++|+.+++|.|+|+++..+++    ++.|+...
T Consensus        93 ~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l----~~~Gl~~~  132 (274)
T 3p8a_A           93 AFATQIVQEKYEQGFKNICLHTNDIEAVKNKL----QSEQVEVV  132 (274)
T ss_dssp             CTTTHHHHTTTCCEEEEEEEECSCHHHHHHHH----HTTTCEEE
T ss_pred             hHHHHhhhhccCCCeEEEEEecCCHHHHHHHH----HHcCCCcC
Confidence            0       124569999999999999999999    99998654

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=90.34  E-value=8.5  Score=36.88  Aligned_cols=124  Identities=15%  Similarity=0.184  Sum_probs=69.4

Q ss_pred             CCcceeEEEEEEeCCHH---HHHHHHHhccCCEEEEEecc-----------CCCceEEEEEec------C-CC-CcceEE
Q 022835           19 KDKRRFLHAVYRVGDLD---RTIKFYTECFGMKLLRKRDV-----------PEEKYSNAFLGF------G-PE-QSHFVV   76 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~---~~~~FY~~~lG~~~~~~~~~-----------~~~~~~~~~l~~------~-~~-~~~~~l   76 (291)
                      ..+.++..+.|.+.|-+   ++..||.. |||.+.....-           ..+...-.|+..      . ++ +.++.+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (989)
T 3opy_A            4 PSISDLSFTSFVTNDDNLFEETFNFYTK-LGFHATRSYVKDNRSDFELTGISTDSIKEIWLESFPLSEVVEASGGRELRK   82 (989)
T ss_dssp             -CEEEEEEEEEEESCHHHHHHHHHHHHH-TTCEEEEEEEC-CCCSCCSCCCC-CCSEEEEEECCCBCCCBCC--CCCCBC
T ss_pred             ccccceEEEEEecCCHHHHHHHHHHHHH-cCceEeeeccCCCCcceeccCcccchHHHHHHHhccchhhhccCCcccccC
Confidence            34788999999999854   78999988 99999876321           112233344310      0 00 001111


Q ss_pred             EeeecC--------CCcc-----------------ccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEE
Q 022835           77 ELTYNY--------GVTS-----------------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHI  131 (291)
Q Consensus        77 ~~~~~~--------~~~~-----------------~~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~  131 (291)
                      ...+..        +..+                 .........+.|.+.|+..+.+.|.+..++.  .|.+...  . .
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~-~  157 (989)
T 3opy_A           83 PLQESVGYESEALLGYSPYQSGGVVIKLRLSNHDLEKNNDLPGEVTFFTASIDKLKAKLIEIGAEI--IPSKIDL--V-E  157 (989)
T ss_dssp             CCTTSTTCCCCSSSCC-CBC-CEEEEEECCCC---CCCCCCSCEEEEECSCHHHHHHHHHHSSCCB--CCCC--C--C-C
T ss_pred             chhhhcccccccccccchhcCCceEEEEEeccccccccccCcceEEEEeCcHHHHHHHhhhccccc--CCCCCCc--e-e
Confidence            111100        0000                 0001123568899999999999998873332  2222211  1 2


Q ss_pred             EEEECCCCCEEEEEEcC
Q 022835          132 AFVKDPDGYIFELIQRG  148 (291)
Q Consensus       132 ~~~~dp~G~~iel~~~~  148 (291)
                      +|..||=||.+.|....
T Consensus       158 ~~~~dp~~~~~~~~~~~  174 (989)
T 3opy_A          158 FSTRDPMGDVISFSSYP  174 (989)
T ss_dssp             EEEESSSEEEEECCSSS
T ss_pred             EEEecCCCCEEeeecCC
Confidence            78999999999987655

>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}

Probab=80.33  E-value=6.3  Score=32.87  Aligned_cols=53  Identities=23%  Similarity=0.203  Sum_probs=37.9

Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCc---------eEEEEEECCCCCE
Q 022835           89 IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGT---------THIAFVKDPDGYI  141 (291)
Q Consensus        89 ~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~---------~~~~~~~dp~G~~  141 (291)
                      .|..++|+..+|.||+++.++++++|+......+.-|.+.         ...+.|.|.+|..
T Consensus       232 ~G~~iNHlT~rv~DId~v~~~m~~~G~~~k~~IeGsP~~lLrQTSf~A~~e~v~F~d~~G~~  293 (340)
T 3iuz_A          232 EGNAFNHATDRVDDVFGLSEQQXALGRPMXDXVEVSGSGRVXQTAFRADTVRRQFIGAQGET  293 (340)
T ss_dssp             HTTSCSEEEEECSCHHHHHHHHHHTTCCBCSCCEECTTSSEEEEEBCCCEEEEEEECTTSCE
T ss_pred             cCCccccccCCcCCHHHHHHHHHHcCCChhhhhcCCcccceeeeeccccceEEEEecCCCce
Confidence            4667999999999999999999999998665433333332         2234566766643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	291
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	8e-29
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-17
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	8e-27
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	3e-13
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	4e-25
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-11
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	2e-17
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	6e-12
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	2e-17
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	2e-05
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	3e-17
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	6e-17
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	4e-04
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	4e-16
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	5e-07
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	2e-15
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	6e-05
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	3e-15
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	7e-05
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	3e-15
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	0.002
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	1e-14
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	5e-04
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	2e-14
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	4e-14
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	1e-05
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	6e-14
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	1e-04
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	5e-12
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	2e-04
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	2e-11
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	5e-11
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	7e-11
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-10
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	0.002
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	2e-10
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	0.003
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	2e-10
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	0.001
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	2e-10
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	1e-09
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	2e-09
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	0.002
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	1e-08
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	1e-08
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	2e-08
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	4e-08
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	6e-08
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	3e-07
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	4e-07
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	2e-06
d1sqia2	210	d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxy	2e-05
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	7e-05
d1u6la_	137	d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudom	8e-05
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	2e-04

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score =  105 bits (261), Expect = 8e-29
 Identities = 74/132 (56%), Positives = 93/132 (70%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQRGPTPEPL 154
           ELI+       L
Sbjct: 122 ELIEEKDAGRGL 133

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 74.7 bits (182), Expect = 2e-17
 Identities = 64/132 (48%), Positives = 87/132 (65%), Gaps = 4/132 (3%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
            MLRVGDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +
Sbjct: 6   TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK 65

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKT 276
           Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ GP+ G  T I    DPDG+K 
Sbjct: 66  YELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 277 VLVDNEDFLKEL 288
            L++ +D  + L
Sbjct: 122 ELIEEKDAGRGL 133

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score =  100 bits (248), Expect = 8e-27
 Identities = 70/132 (53%), Positives = 84/132 (63%), Gaps = 5/132 (3%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           RR LH + RVGDLDR+IKFYTE  GMK+LRK DVPE+KY+  FLG+GPE S  V+ELTYN
Sbjct: 2   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 61

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
           YGVTSY     +GH AI  EDV +LV ++R     +  E          +AFV DPDGY 
Sbjct: 62  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES-----GFMAFVVDPDGYY 116

Query: 142 FELIQRGPTPEP 153
            EL+      E 
Sbjct: 117 IELLNEKTMMEK 128

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 63.5 bits (153), Expect = 3e-13
 Identities = 55/131 (41%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
            M+RVGDL RSIKFY + LGMK+LR  D PE KYTL  LGY  E  +TVLELTYNYGVT 
Sbjct: 7   TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS 66

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKT 276
           Y    AY  +AI  +DV +    +    ++    I  +          +   VDPDG+  
Sbjct: 67  YKHDEAYGHIAIGVEDVKELVADM----RKHDVPIDYEDESG-----FMAFVVDPDGYYI 117

Query: 277 VLVDNEDFLKE 287
            L++ +  +++
Sbjct: 118 ELLNEKTMMEK 128

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.0 bits (240), Expect = 4e-25
 Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 26/153 (16%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVE----- 77
                + RV D  +++ FYT   GM L++K D P  K+S  FL +  +      +     
Sbjct: 23  LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIA 82

Query: 78  ----------LTYNYGVTSYD---------IGTGFGHFAIATEDVYKLVENIRAKGGNVT 118
                     LT+N+G    +            GFGH  IA  DVY   +     G    
Sbjct: 83  WALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFV 142

Query: 119 REPGPLKGGTTHIAFVKDPDGYIFELIQRGPTP 151
           ++P    G    +AF++DPDGY  E++      
Sbjct: 143 KKPDD--GKMKGLAFIQDPDGYWIEILNPNKMA 173

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (143), Expect = 2e-11
 Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 22/146 (15%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLE------ 207
           L Q MLRV D  +S+ FY + LGM L++  D P  K++L  L Y +++     +      
Sbjct: 24  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 83

Query: 208 ---------LTYNYGV-----TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR 253
                    LT+N+G        Y  GN+  +                   +ELG K  +
Sbjct: 84  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 143

Query: 254 QPGPIPGLNTKITSFVDPDGWKTVLV 279
           +P         +    DPDG+   ++
Sbjct: 144 KPDDGKM--KGLAFIQDPDGYWIEIL 167

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 74.9 bits (183), Expect = 2e-17
 Identities = 21/131 (16%), Positives = 35/131 (26%), Gaps = 8/131 (6%)

Query: 23  RFLHAVYRV----GDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVEL 78
            F  A  R+    G LD  I+FY E   +K +         Y     G      H     
Sbjct: 5   SFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIG-EFSQHNGYDGVMFGLPHADYHLEFTQ 63

Query: 79  TYNYGVTSYDIGTGFGHFAIAT-EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDP 137
                            F +    ++  +   ++  G        P          ++DP
Sbjct: 64  YEGGSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSN--GGVTIEDP 121

Query: 138 DGYIFELIQRG 148
           DG+    +   
Sbjct: 122 DGWRIVFMNSK 132

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 59.9 bits (144), Expect = 6e-12
 Identities = 17/133 (12%), Positives = 41/133 (30%), Gaps = 10/133 (7%)

Query: 154 LCQVMLRV----GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELT 209
                +R+    G L   I+FYE+ L +K +    +      +       +      +  
Sbjct: 6   FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYE 65

Query: 210 YNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFV 269
                      +       +  ++      +    + +G +      P         +  
Sbjct: 66  GGSTAPVPHPDSLLVFYVPNAVELAAITSKL----KHMGYQEVESENPYWSNGG--VTIE 119

Query: 270 DPDGWKTVLVDNE 282
           DPDGW+ V ++++
Sbjct: 120 DPDGWRIVFMNSK 132

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 75.6 bits (185), Expect = 2e-17
 Identities = 31/157 (19%), Positives = 48/157 (30%), Gaps = 27/157 (17%)

Query: 17  PKKDK---RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH 73
           PK DK   +RF H  +  GD     + ++   GM+   K D+      +A          
Sbjct: 3   PKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLR 62

Query: 74  FVVELTYNYGVTSYDIG-----------------------TGFGHFAIATEDVYKLVENI 110
           F+    Y+  +++ +I                         G    AI  ED        
Sbjct: 63  FLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS 122

Query: 111 RAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR 147
            A G   +  P  L    T IA VK     +   +  
Sbjct: 123 VANGAIPSSPPIVLNEAVT-IAEVKLYGDVVLRYVSY 158

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.7 bits (97), Expect = 2e-05
 Identities = 16/127 (12%), Positives = 30/127 (23%), Gaps = 27/127 (21%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           +    GD     + +   LGM+     D        A       D   +    Y+  ++ 
Sbjct: 16  IEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSA 75

Query: 217 -----------------------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR 253
                                   + G     VAI  +D   +  +        G   + 
Sbjct: 76  GEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSS 131

Query: 254 QPGPIPG 260
            P  +  
Sbjct: 132 PPIVLNE 138

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.5 bits (182), Expect = 3e-17
 Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 10/141 (7%)

Query: 17  PKKDKRRFL---HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH 73
           PK ++ RFL      + VG+  +   FY    G + L  + +               +  
Sbjct: 2   PKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIV 61

Query: 74  FVVELTYNYGVTSYDI-----GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK--G 126
           FV+    N             G G    A   ED   +V+  R +G  + REP   +   
Sbjct: 62  FVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKF 121

Query: 127 GTTHIAFVKDPDGYIFELIQR 147
           G    A ++        L+++
Sbjct: 122 GKVKFAVLQTYGDTTHTLVEK 142

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 74.5 bits (182), Expect = 6e-17
 Identities = 23/151 (15%), Positives = 39/151 (25%), Gaps = 21/151 (13%)

Query: 17  PKKDK---RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH 73
           P+ D+     F H      D       ++   G  L  + D+     ++A L        
Sbjct: 4   PRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLS 63

Query: 74  FVVELTYNYGVTSYDI-----------------GTGFGHFAIATEDVYKLVENIRAKGGN 116
           F+    Y +G  +                    G      A+   D         A G  
Sbjct: 64  FLFTAPYAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGAR 123

Query: 117 VTREPGPLKGGTTHIAFVKDPDGYIFELIQR 147
               P  L  G   +A V+     +   +  
Sbjct: 124 PAFGPVDLGRGFR-LAEVELYGDVVLRYVSY 153

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 37.9 bits (87), Expect = 4e-04
 Identities = 17/117 (14%), Positives = 25/117 (21%), Gaps = 13/117 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V L   D   +   +   LG  L    D        A L       + +    Y +G   
Sbjct: 17  VELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADA 76

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVT-------------QELGGKITRQPGPIPG 260
            T        A +          V  V                 G +    P  +  
Sbjct: 77  ATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR 133

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 71.6 bits (174), Expect = 4e-16
 Identities = 10/134 (7%), Positives = 27/134 (20%), Gaps = 2/134 (1%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +   H      + +    FY    G++ ++     ++             S       + 
Sbjct: 5   KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFE 64

Query: 82  YGVT--SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
             +   +Y          +       L            +               +D +G
Sbjct: 65  IPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEG 124

Query: 140 YIFELIQRGPTPEP 153
               L+        
Sbjct: 125 LRLVLLVSNGEKVE 138

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 46.2 bits (108), Expect = 5e-07
 Identities = 14/129 (10%), Positives = 35/129 (27%), Gaps = 6/129 (4%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAML--GYAEEDQTTVLELTYNYGV 214
           + +   +   +  FY+  LG++ ++     +      +          T +         
Sbjct: 10  ISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVG 69

Query: 215 TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGW 274
             Y   NA  ++ +                +       +        N     F D +G 
Sbjct: 70  RTYRGTNAITRIGLLVPSEDSLHYWKERFEK----FDVKHSEMTTYANRPALQFEDAEGL 125

Query: 275 KTVLVDNED 283
           + VL+ +  
Sbjct: 126 RLVLLVSNG 134

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 70.3 bits (171), Expect = 2e-15
 Identities = 26/157 (16%), Positives = 48/157 (30%), Gaps = 12/157 (7%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           RF HA+    +L  T   +T+  G  L  +                  Q   +    ++ 
Sbjct: 5   RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTR--------VAQFLSLSTKAHDV 56

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVEN---IRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
               +       H +   E    L+     I     ++   P           +  DP G
Sbjct: 57  AFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSG 116

Query: 140 YIFELIQRGPTPEPLCQ-VMLRVGDLGRSIKFYEKAL 175
              E+   G    P  + V      LG++I ++++ L
Sbjct: 117 NRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDRIL 153

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 40.3 bits (93), Expect = 6e-05
 Identities = 14/119 (11%), Positives = 30/119 (25%), Gaps = 13/119 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
            ++   +L  +   + K LG  L   V           L             +       
Sbjct: 9   ALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSL-----------STKAHDVA 57

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITS--FVDPDG 273
           +       ++   +  +    +++           +   GP     T   +  F DP G
Sbjct: 58  FIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSG 116

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 69.7 bits (169), Expect = 3e-15
 Identities = 20/140 (14%), Positives = 39/140 (27%), Gaps = 16/140 (11%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRK--------RDVPEEKYSNAFLGFGPEQSHF 74
           R  +    V  LD  I F+ E       R         R                   H 
Sbjct: 9   RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHS 68

Query: 75  VVELTYNYGVTS-------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGG 127
            +EL+      +            G+       ED+ ++V  +   G  +  E    +  
Sbjct: 69  RIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENS 128

Query: 128 TTHIAFVKDPDGYIFELIQR 147
              + +++  +G +  L + 
Sbjct: 129 Y-RLCYIRGVEGILIGLAEE 147

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 40.0 bits (92), Expect = 7e-05
 Identities = 17/128 (13%), Positives = 40/128 (31%), Gaps = 12/128 (9%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYT--------LAMLGYAEEDQTTVLEL 208
           V + V  L  +I F+E+       R   + E+           + +      D  + +EL
Sbjct: 13  VSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIEL 72

Query: 209 TYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL---GGKITRQPGPIPGLNTKI 265
           +                 A+    V  + E ++ +   L   G ++  +       + ++
Sbjct: 73  SRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRL 131

Query: 266 TSFVDPDG 273
                 +G
Sbjct: 132 CYIRGVEG 139

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 69.3 bits (168), Expect = 3e-15
 Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 12/133 (9%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVV--ELTYNYG 83
           H  Y   D D   K+Y E FG   L + + PE+      +    + +  +   ++     
Sbjct: 10  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 69

Query: 84  VTS--------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFV- 134
             S        ++   G  H A   +D+  +   +R +G  +  +   L  G   I F+ 
Sbjct: 70  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMH 129

Query: 135 -KDPDGYIFELIQ 146
            K   G + EL Q
Sbjct: 130 PKSGKGVLIELTQ 142

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 35.7 bits (81), Expect = 0.002
 Identities = 20/130 (15%), Positives = 39/130 (30%), Gaps = 18/130 (13%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAML----------GYAEEDQTTVL 206
           V     D   + K+Y++  G   L   + PE      M+             +       
Sbjct: 11  VAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLND 70

Query: 207 ELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKIT 266
           E T    + ++        +A   DD+   +  +    +E G ++     P  G      
Sbjct: 71  ESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATL----RERGVQLL-YDEPKLGTGGNRI 125

Query: 267 SFV---DPDG 273
           +F+      G
Sbjct: 126 NFMHPKSGKG 135

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 68.3 bits (166), Expect = 1e-14
 Identities = 26/136 (19%), Positives = 39/136 (28%), Gaps = 10/136 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +     V+ VG+  +   +Y+  FGM+L+            A        + FV+     
Sbjct: 6   KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK 65

Query: 82  YGVTSYDI--------GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK--GGTTHI 131
                           G G    AI   D           G     EP  LK   GT  +
Sbjct: 66  PATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVL 125

Query: 132 AFVKDPDGYIFELIQR 147
           A +         L+ R
Sbjct: 126 AAIATYGKTRHTLVDR 141

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 37.9 bits (87), Expect = 5e-04
 Identities = 21/138 (15%), Positives = 38/138 (27%), Gaps = 14/138 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V+  VG+  ++  +Y  A GM+L+            A           VL          
Sbjct: 11  VVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPW 70

Query: 217 Y--------TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSF 268
                      G+    +AI   D   +         E G +   +P  +   +  +   
Sbjct: 71  GHFLADHVAEHGDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLA 126

Query: 269 V--DPDGWKTVLVDNEDF 284
                   +  LVD   +
Sbjct: 127 AIATYGKTRHTLVDRTGY 144

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 66.6 bits (161), Expect = 2e-14
 Identities = 25/143 (17%), Positives = 43/143 (30%), Gaps = 16/143 (11%)

Query: 17  PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVV 76
           P  D  R  +    V DL ++ +FY +  G+ +  + +                    + 
Sbjct: 10  PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE-------------NTIYLRSLE 56

Query: 77  ELTYNYGVTSYDIGTGFGHFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAF 133
           E  ++  V           FA   +   +V       +  G    R       G      
Sbjct: 57  EFIHHNLVLRQGPIAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVR 116

Query: 134 VKDPDGYIFELIQRGPTPEPLCQ 156
           V+DP G+ +E        E L Q
Sbjct: 117 VEDPLGFPYEFFYETEHVERLTQ 139

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 65.7 bits (159), Expect = 4e-14
 Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 8/124 (6%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSN-AFLGFGPEQSHFVVELTY 80
               H  + V DL+R  +     F  + +   D  +   S   F   G       + +  
Sbjct: 3   EGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAI 56

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
             G    +       F I   D  +  E +   G ++      ++G    I +  D D +
Sbjct: 57  MQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSI-YFYDDDNH 115

Query: 141 IFEL 144
           +FEL
Sbjct: 116 MFEL 119

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 41.8 bits (97), Expect = 1e-05
 Identities = 19/117 (16%), Positives = 35/117 (29%), Gaps = 10/117 (8%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           +   V DL R  +  E     + +   D  ++  +        +     + +    G  E
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD-----IWVAIMQG--E 60

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                +Y  +A   DD         +   +LG  +      + G    I  F D D 
Sbjct: 61  KLAERSYNHIAFKIDDADFDRYAERV--GKLGLDMRPPRPRVEGEGRSIY-FYDDDN 114

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 65.8 bits (159), Expect = 6e-14
 Identities = 21/129 (16%), Positives = 38/129 (29%), Gaps = 9/129 (6%)

Query: 18  KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVE 77
            K   R  H   RV D+ + ++ Y E  G+  + + D                      +
Sbjct: 2   NKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREAD 61

Query: 78  LTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDP 137
                           G   +  + + +L  ++ A G  V + P             + P
Sbjct: 62  EPGMD---------FMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAP 112

Query: 138 DGYIFELIQ 146
            G+ FEL  
Sbjct: 113 SGHHFELYA 121

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 39.6 bits (91), Expect = 1e-04
 Identities = 15/117 (12%), Positives = 34/117 (29%), Gaps = 13/117 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V LRV D+ ++++ Y + LG+  +   D+                       +      +
Sbjct: 11  VQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKF---------SLVLREAD 61

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
               +      +  D + +    +       G  + + P        +   F  P G
Sbjct: 62  EPGMDFMGFKVVDEDALRQLERDL----MAYGCAVEQLPAGELNSCGRRVRFQAPSG 114

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 61.1 bits (147), Expect = 5e-12
 Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 9/124 (7%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R  H      D+ R   +  E  G ++       +     A++          +      
Sbjct: 5   RLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGP 63

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VKDPDGY 140
            +      T   H  I   D       + A   +   E GP + G ++  +  + DPDG+
Sbjct: 64  RMHHVAFATHEKHNIIQICD------KMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 117

Query: 141 IFEL 144
             E+
Sbjct: 118 RIEI 121

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 39.1 bits (90), Expect = 2e-04
 Identities = 19/118 (16%), Positives = 32/118 (27%), Gaps = 9/118 (7%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
                 D+ R   + E  LG ++   +   +     A +   +    T L       +  
Sbjct: 9   FNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGPRMHH 67

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGW 274
                      I   D   +  +          +I R PG     N      +DPDG 
Sbjct: 68  VAFATHEKHNIIQICDKMGALRI--------SDRIERGPGRHGVSNAFYLYILDPDGH 117

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 58.7 bits (141), Expect = 2e-11
 Identities = 24/123 (19%), Positives = 34/123 (27%), Gaps = 14/123 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
               H    V DL  +I FY +  G +L             A+L  G             
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEA------RWDQGAYLELGSLWLCLS----RE 52

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
                         F IA  D  +    +RA G    ++            +  DPDG+ 
Sbjct: 53  PQYGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS----EGDSFYFLDPDGHR 108

Query: 142 FEL 144
            E 
Sbjct: 109 LEA 111

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 56.5 bits (135), Expect = 5e-11
 Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 14/124 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           RR + A     +  R   FY +  GM              + ++           ++++ 
Sbjct: 2   RR-VVANIATPEPARAQAFYGDILGM---------PVAMDHGWIVTHASPLEAHAQVSFA 51

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
                   GT     +I  ++  ++   I   G  +   P     G     F++DP G +
Sbjct: 52  RE---GGSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWG-VQRLFLRDPFGKL 107

Query: 142 FELI 145
             ++
Sbjct: 108 INIL 111

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 57.8 bits (139), Expect = 7e-11
 Identities = 23/131 (17%), Positives = 45/131 (34%), Gaps = 12/131 (9%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +        V  LD+     TE FG   + + D        A       ++   + + Y 
Sbjct: 11  QGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ------EAIFQSIKGEAFGEIVVKYL 64

Query: 82  YGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
            G T         H AI      ++    E ++ +G + +   G +        + ++ +
Sbjct: 65  DGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS---GIIDRFYFKSLYFRESN 121

Query: 139 GYIFELIQRGP 149
           G +FE+   GP
Sbjct: 122 GILFEIATDGP 132

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 56.2 bits (134), Expect = 1e-10
 Identities = 20/119 (16%), Positives = 39/119 (32%), Gaps = 11/119 (9%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DL +++ F+ E  G+           +++        +    +        V 
Sbjct: 7   HLTLAVSDLQKSVTFWHELLGLT-------LHARWNTGAYLTCGDLWVCLSYDEARQYVP 59

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
             +       F +A ED   L + +   G  + ++            +  DPDG+  EL
Sbjct: 60  PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS----EGASFYFLDPDGHKLEL 114

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 35.4 bits (80), Expect = 0.002
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLR 181
           + L V DL +S+ F+ + LG+ L  
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHA 32

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 55.1 bits (131), Expect = 2e-10
 Identities = 18/119 (15%), Positives = 34/119 (28%), Gaps = 13/119 (10%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V D+    +F  + FG+     R                  +   +         
Sbjct: 6   HLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVM---------RDNDGFILTLMKGKEV 56

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
            Y      G    + E V K+ + ++  G  V            +  +V+ P G+  E+
Sbjct: 57  QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPK----HAHAYTFYVEAPGGFTIEV 111

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 34.7 bits (78), Expect = 0.003
 Identities = 7/24 (29%), Positives = 12/24 (50%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLL 180
           + L V D+  + +F EK  G+   
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCS 30

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 55.0 bits (131), Expect = 2e-10
 Identities = 17/122 (13%), Positives = 30/122 (24%), Gaps = 8/122 (6%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV 84
              V    D+   ++F+T+  G   +   D        A +                   
Sbjct: 6   AVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQVVPD 59

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
            +       G   +  E    +  N R   G    E      G      ++DP G     
Sbjct: 60  NTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGRE--FALRDPAGNCVHF 117

Query: 145 IQ 146
           + 
Sbjct: 118 VA 119

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 35.7 bits (81), Expect = 0.001
 Identities = 12/116 (10%), Positives = 27/116 (23%), Gaps = 12/116 (10%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY 217
           +L   D+  +++F+   LG   +   D              +                  
Sbjct: 9   VLTARDVAEAVEFWTDRLGFSRVFVEDDFAGVV------RDDVTLFISAVQDQVVPDNTQ 62

Query: 218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                     +  +     +      +     +I  QP        +  +  DP G
Sbjct: 63  AWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPW------GREFALRDPAG 112

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 55.3 bits (132), Expect = 2e-10
 Identities = 20/125 (16%), Positives = 34/125 (27%), Gaps = 14/125 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           R   +  + V D+     F T+  G+      D             G             
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------------NGDLFRIDSRAWRIA 50

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDG 139
                 D     G+       + ++ + ++  G  VT     L    G T +    DP G
Sbjct: 51  VQQGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFG 110

Query: 140 YIFEL 144
              E+
Sbjct: 111 LPLEI 115

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 53.6 bits (127), Expect = 1e-09
 Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 4/130 (3%)

Query: 23  RFLHAVYRVGDLDRTIKFYTEC-FGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           R       V D+ ++++FY +    +          E   +  +    +    V      
Sbjct: 2   RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
           +   +             T  V K    +   G     +P     G    A VKDPDG +
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQ-RYAIVKDPDGNV 120

Query: 142 FELIQRGPTP 151
            +L    P P
Sbjct: 121 VDLFA--PLP 128

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 52.1 bits (124), Expect = 2e-09
 Identities = 19/121 (15%), Positives = 34/121 (28%), Gaps = 12/121 (9%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
                V ++ +           K              A            + L+ N+ V 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKADY------ANDGFAQF----TIGSHCLMLSQNHLVP 54

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
             +  +G     I  EDV +  + +   G  V   P     GT     V+ P G + +  
Sbjct: 55  LENFQSGI-IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGT-ESLLVQGPAGLVLDFY 112

Query: 146 Q 146
           +
Sbjct: 113 R 113

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 35.6 bits (81), Expect = 0.002
 Identities = 16/118 (13%), Positives = 37/118 (31%), Gaps = 16/118 (13%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
           Q+ + V ++ +     E  L  K              A  G+A+    +   +     + 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKADY-----------ANDGFAQFTIGSHCLMLSQNHLV 53

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDG 273
                 +   + I  +DV ++ + +N +  ++    T          T+      P G
Sbjct: 54  PLENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-----GTESLLVQGPAG 106

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 51.5 bits (123), Expect = 1e-08
 Identities = 21/136 (15%), Positives = 37/136 (27%), Gaps = 12/136 (8%)

Query: 22  RRFLHAVYRV--GDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELT 79
           +   H  + V  G +     FY + F  +  R  D+  E                 + L 
Sbjct: 4   KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLN 63

Query: 80  YNYGVTSYDIG--------TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHI 131
                 +  I          G  H A  T+D+ K  + ++  G      P         +
Sbjct: 64  EESSKGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPD--TYYEML 121

Query: 132 AFVKDPDGYIFELIQR 147
                  G   + +Q 
Sbjct: 122 EGRLPDHGEPVDQLQA 137

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 50.4 bits (119), Expect = 1e-08
 Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 14/125 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  +  + V D+     F T+  G+               A            V+    
Sbjct: 3   ERLGYLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQ---- 52

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDG 139
                 D     G        + ++ + +R  G   TR    L        +  ++DP G
Sbjct: 53  --PGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFG 110

Query: 140 YIFEL 144
              E+
Sbjct: 111 LPLEI 115

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 49.6 bits (117), Expect = 2e-08
 Identities = 19/126 (15%), Positives = 33/126 (26%), Gaps = 9/126 (7%)

Query: 28  VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSN-------AFLGFGPEQSHFVVELTY 80
           +     +   + FY   FG         P+ K          + L      S  V +++ 
Sbjct: 12  LVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA-GSSFVVCDVSS 70

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
             G ++         F + T+D    V      G                   V DP G 
Sbjct: 71  LPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPFGV 129

Query: 141 IFELIQ 146
            +   +
Sbjct: 130 TWIFAE 135

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 50.9 bits (121), Expect = 4e-08
 Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 13/113 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD-----VPEEKYSNAFLGFGPEQSHFVV 76
            RF H V  V +L     ++    G     +         E   ++  L    E     +
Sbjct: 8   SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPL 67

Query: 77  -ELTYNYGVTS-------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP 121
            E  +     S       +  G G  H A+A++DV + +  ++A+      E 
Sbjct: 68  NEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEF 120

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 48.0 bits (113), Expect = 6e-08
 Identities = 21/124 (16%), Positives = 34/124 (27%), Gaps = 20/124 (16%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
              D D T  FY    G  +              F   G         +   +     D 
Sbjct: 9   PSRDFDSTAAFYER-LGFGI-------------VFRDAGWMILQRGDLMLEFFAHPGLDP 54

Query: 90  GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTH------IAFVKDPDGYIFE 143
              +    +  +D+ +     ++ G   T    P             +A + DPDG +  
Sbjct: 55  LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLR 114

Query: 144 LIQR 147
           LIQ 
Sbjct: 115 LIQN 118

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 46.2 bits (108), Expect = 3e-07
 Identities = 17/130 (13%), Positives = 29/130 (22%), Gaps = 22/130 (16%)

Query: 23  RFLHA--VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
           +FL A  V    D+   + F+ +  G +                            ++  
Sbjct: 3   KFLGAVPVLTAVDVPANVSFWVDTLGFEKDFGDR--------------DFAGVRRGDIRL 48

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTT------HIAFV 134
           +   T + I        I   D   L E           +                   V
Sbjct: 49  HISRTEHQIVADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAV 108

Query: 135 KDPDGYIFEL 144
           +DP G     
Sbjct: 109 RDPAGNCVHF 118

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 46.7 bits (110), Expect = 4e-07
 Identities = 23/119 (19%), Positives = 38/119 (31%), Gaps = 9/119 (7%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H V  V D  + + FYTE  G  L    D+     ++    F            +   + 
Sbjct: 13  HFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHF-----LHCNGRHHTIALA 67

Query: 86  SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
           ++ I     HF +     +DV    + + A G   +   G      T   +   P   I
Sbjct: 68  AFPIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPMI 125

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 18/108 (16%), Positives = 34/108 (31%), Gaps = 13/108 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHF------VVELT 79
             V   G ++  + FY +  G   +++    +     + L               + E  
Sbjct: 12  GNVEL-GRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPA 70

Query: 80  YNYGVT------SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP 121
                +       +  G G  H A+ T D+ + V  +RA G      P
Sbjct: 71  LAKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP 118

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 15/108 (13%), Positives = 35/108 (32%), Gaps = 13/108 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH-FVVELTYNYGV 84
                  +++   ++Y +          D  +     + L      ++   +++  N   
Sbjct: 30  GNQPD-QEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPA 88

Query: 85  T-----------SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP 121
                        Y+ G G  H A+ TED+   + ++R +G      P
Sbjct: 89  PGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP 136

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.9 bits (95), Expect = 7e-05
 Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 13/102 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH------FVVEL- 78
           HAV  V +L   + +     G     +    +   + + L      S+       + E  
Sbjct: 25  HAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPV 84

Query: 79  ------TYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKG 114
                 +       ++ G G  H A+ +ED+++ +  +R + 
Sbjct: 85  HGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRS 126

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.7 bits (92), Expect = 8e-05
 Identities = 14/122 (11%), Positives = 36/122 (29%), Gaps = 10/122 (8%)

Query: 32  GDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGT 91
           G+       Y +  G  L       +            ++      +  ++ + + D   
Sbjct: 12  GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHP 71

Query: 92  GFGHFA---------IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
            + +           + ++   + + N  A+GG+V    GP     +      D  G  +
Sbjct: 72  AYPYEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASF-GMFTDRFGVAW 130

Query: 143 EL 144
            +
Sbjct: 131 MV 132

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 15/138 (10%), Positives = 33/138 (23%), Gaps = 11/138 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
             F    +           +        +    V   +  N  L +   + + ++    N
Sbjct: 8   MGFEFIEFASPTPGTLEPIFEI------MGFTKVATHRSKNVHL-YRQGEINLILNNEPN 60

Query: 82  YGVTSY--DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
              + +  + G      A   +D  K        G               ++  +K   G
Sbjct: 61  SIASYFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHI--DTGPMELNLPAIKGIGG 118

Query: 140 YIFELIQRGPTPEPLCQV 157
               LI R      +  +
Sbjct: 119 APLYLIDRFGEGSSIYDI 136

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	291
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.84
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.84
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.83
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.82
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.8
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.79
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.78
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.78
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.78
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.77
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.77
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.77
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.77
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.76
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.76
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.75
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.75
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.75
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.75
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.74
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.74
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.74
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.73
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.73
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.73
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.73
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.72
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.72
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.71
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.71
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.71
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.71
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.71
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.71
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.71
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.7
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.7
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.7
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.7
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.7
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.69
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.68
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.68
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.68
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.67
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.65
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.65
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.65
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.63
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.61
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.58
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.56
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.56
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.54
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.52
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.52
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.48
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.47
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.47
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.46
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.35
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.32
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.3
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.28
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.24
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.2
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.17
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.1
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.09
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.05
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.04
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.02
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.96
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.85
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.84
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.63
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.33
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.24
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	96.48
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	96.18
d2g3aa1	137	Probable acetyltransferase Atu2258 {Agrobacterium	81.57

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=1.6e-20  Score=137.68  Aligned_cols=133  Identities=49%  Similarity=0.852  Sum_probs=94.1

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++|||++..+............+........................+.+..|+++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            37899999999999999999999999998776544444444433322211122222222122222334457889999999


Q ss_pred             chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhHHhh
Q 022835          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKEL  288 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~~~~  288 (291)
                      +++.+.+++    +++|..+..+|...++++.+++||+|||||+|||+++++...+|
T Consensus        81 ~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~~~  133 (135)
T d1f9za_          81 NAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGL  133 (135)
T ss_dssp             CHHHHHHHH----HHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-------
T ss_pred             HHHHHHHHH----HHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccccC
Confidence            999999999    99999999988887776788999999999999999999987765

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=9.4e-20  Score=133.51  Aligned_cols=129  Identities=57%  Similarity=1.012  Sum_probs=98.1

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeC
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~  101 (291)
                      |+|.|+.|.|+|+++|.+||+++|||++...............+........................+.+..|+++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            68999999999999999999999999998876665655555555443333333333333333333445567899999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC
Q 022835          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       102 di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      +++++.++++++|..+...+...+++...++|++||||++|||+|.++.
T Consensus        81 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~  129 (135)
T d1f9za_          81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             HHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCc
Confidence            9999999999999998888877777666668899999999999998764

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.83  E-value=2.1e-19  Score=134.23  Aligned_cols=129  Identities=16%  Similarity=0.266  Sum_probs=94.5

Q ss_pred             CCCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccC-----------CCceEEEEEecCCCCcceEEE-eeecCCC
Q 022835           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-----------EEKYSNAFLGFGPEQSHFVVE-LTYNYGV   84 (291)
Q Consensus        17 ~~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~l~~~~~~~~~~l~-~~~~~~~   84 (291)
                      .+..+++|+||+|.|+|++++.+||++ |||++..+....           ......+++...++...+.+. .......
T Consensus         3 ~~~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~   81 (149)
T d1ss4a_           3 AKNKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTI   81 (149)
T ss_dssp             TTCCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCC
T ss_pred             CCCCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCc
Confidence            345699999999999999999999999 999998764332           223455666554333333221 1122221


Q ss_pred             c--c--ccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835           85 T--S--YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        85 ~--~--~~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      .  .  .....|+.|+||.|+|+++++++|+++|+++..+|....++.. .+|++||+|++|||+|.
T Consensus        82 ~~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          82 ADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYR-LCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             CBCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEE-EEEEECGGGCEEEEEEE
T ss_pred             ccccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeE-EEEEECCCCCEEEEEEc
Confidence            1  1  1234578999999999999999999999999888877666554 48999999999999985

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.82  E-value=9.2e-20  Score=130.12  Aligned_cols=115  Identities=17%  Similarity=0.128  Sum_probs=88.3

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeC
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~  101 (291)
                      |+|.||.|.|+|+++|.+||+++||+++....+    +  .+.+..|+  .  .+.+...........+ ...+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~--~~~~~~g~--~--~l~l~~~~~~~~~~~~-~~~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----G--FAQFTIGS--H--CLMLSQNHLVPLENFQ-SGIIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----T--EEEEEETT--E--EEEEESSCSSSCCCCC-SCEEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----C--eEEEEEcC--c--eeeeeecccCCCCCCC-cceEEEEEEC
Confidence            589999999999999999999999999865533    2  24455543  2  2334333222222223 3358999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |+++++++++++|+.+..+|...++|.+. ++|+|||||+|||++.+
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~g~~~-~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEE-EEEECGGGCEEEEEECC
T ss_pred             CHHHHHHHHHhhccccccceEEeeCCeEE-EEEECCCCCEEEEEEeC
Confidence            99999999999999999999999988765 89999999999999863

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.80  E-value=2.9e-18  Score=127.21  Aligned_cols=129  Identities=9%  Similarity=0.084  Sum_probs=91.8

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCC-ceEEEEEecCCCCcceEEEeeecCCCccccCC-CCceEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIG-TGFGHF   96 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~i   96 (291)
                      ..+.+|+||+|.|+|++++.+||+++|||++..+....+. .....++..+.......+.........+...+ .++.|+
T Consensus         2 ~~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hi   81 (144)
T d1zswa1           2 YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRI   81 (144)
T ss_dssp             SCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEE
T ss_pred             CcccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEE
Confidence            3589999999999999999999999999999877554332 22233333333333444555544433333333 358999


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCC
Q 022835           97 AIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        97 ~~~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      ||.|++   ++++.++|++.|+.+..+ ... ++.. .+||+||||+.|||++..+.
T Consensus        82 af~v~~~~~l~~~~~~l~~~gv~~~~~-~~~-~~~~-~~yf~DPdG~~iEl~~~~~~  135 (144)
T d1zswa1          82 GLLVPSEDSLHYWKERFEKFDVKHSEM-TTY-ANRP-ALQFEDAEGLRLVLLVSNGE  135 (144)
T ss_dssp             EEEESCHHHHHHHHHHHHHTTCEECCS-EEE-TTEE-EEEEECTTCCEEEEEECTTC
T ss_pred             EEecCCchhHHHHhhhhhccceeeeCc-ccc-CCeE-EEEEECCCCCEEEEEEeCCC
Confidence            999988   778899999999987543 333 3344 48999999999999987653

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.79  E-value=3.3e-19  Score=127.17  Aligned_cols=114  Identities=19%  Similarity=0.127  Sum_probs=86.5

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecc
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d  232 (291)
                      ++.|+.|.|+|++++.+||+++||+++....+    ++.  .+..+    +..+.+......+.... +...+++|.|+|
T Consensus         2 ~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~~--~~~~g----~~~l~l~~~~~~~~~~~-~~~~~~~f~v~D   70 (115)
T d2i7ra1           2 NLNQLDIIVSNVPQVCADLEHILDKKADYAND----GFA--QFTIG----SHCLMLSQNHLVPLENF-QSGIIIHIEVED   70 (115)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TEE--EEEET----TEEEEEESSCSSSCCCC-CSCEEEEEECSC
T ss_pred             cceEEEEEECCHHHHHHHHHHhhCCceeeecC----CeE--EEEEc----CceeeeeecccCCCCCC-CcceEEEEEECC
Confidence            57899999999999999999999999765432    233  33322    24454544332222122 234689999999


Q ss_pred             hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      ++++++++    +++|+++..+|...++ +.+.+||+|||||+||+++.+
T Consensus        71 ~d~~~~~l----~~~G~~i~~~~~~~~~-g~~~~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          71 VDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             HHHHHHHH----HHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEECC
T ss_pred             HHHHHHHH----HhhccccccceEEeeC-CeEEEEEECCCCCEEEEEEeC
Confidence            99999999    9999999999988886 468999999999999999864

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.78  E-value=1.7e-18  Score=128.45  Aligned_cols=130  Identities=22%  Similarity=0.320  Sum_probs=92.7

Q ss_pred             CCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecC--CCCcceEEEeeecCCC--c------cc
Q 022835           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFG--PEQSHFVVELTYNYGV--T------SY   87 (291)
Q Consensus        18 ~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~l~~~~~~~~--~------~~   87 (291)
                      +.|+.+|+||+|.|+|+++|++||+++||++.......+..+....+....  .......+++......  .      +.
T Consensus         2 ~~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~   81 (145)
T d1jc4a_           2 EDLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKH   81 (145)
T ss_dssp             CCCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHT
T ss_pred             cccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCccccccccc
Confidence            467999999999999999999999999999998776655555444443210  0112233444432211  1      11


Q ss_pred             cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecC-CccCCCCceEEEEE--ECCCCCEEEEEEcC
Q 022835           88 DIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE-PGPLKGGTTHIAFV--KDPDGYIFELIQRG  148 (291)
Q Consensus        88 ~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~-~~~~~~g~~~~~~~--~dp~G~~iel~~~~  148 (291)
                      ..+.|+.|+||.|+|+++++++|+++|+++..+ +...++|... +|+  +||+|++|||+|.+
T Consensus        82 ~~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~-~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          82 NGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRI-NFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEE-EEBCGGGGTTSCEEEEECC
T ss_pred             CCCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEE-EEEeccCCCCeEEEEEECC
Confidence            245689999999999999999999999998654 4444555543 444  78999999999974

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.78  E-value=5.8e-18  Score=128.11  Aligned_cols=123  Identities=16%  Similarity=0.179  Sum_probs=92.3

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      |..++++||.|.|+|++++++||+++|||++..+...+.......++..+........ . ..      ....+..|+++
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~------~~~~~~~h~~~   72 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAF-I-HH------PEKGRLHHVSF   72 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEE-E-EC------SSSSEEEEEEE
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccccc-c-cc------CCCCccceeEE
Confidence            3578899999999999999999999999999877666565555555544332222221 1 11      11236889999


Q ss_pred             EeCCHH---HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           99 ATEDVY---KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        99 ~v~di~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .+.+++   +++++|++.|+.+..++.....+...++||+|||||.|||....+
T Consensus        73 ~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          73 HLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             ECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             EEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence            997655   788999999999887776666555556999999999999998764

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.78  E-value=1.9e-18  Score=130.83  Aligned_cols=124  Identities=13%  Similarity=0.108  Sum_probs=90.0

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      ..+++||.|.|+|++++++||+++|||++.++...........+......  ........      ....++..|++|.+
T Consensus         3 ~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~h~~~~~   74 (162)
T d1mpya2           3 AVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--AHDVAFIH------HPEKGRLHHVSFHL   74 (162)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB--SCSEEEEE------CSSSSEEEEEEEEC
T ss_pred             cccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccc--cccccccc------cCCCCccceeEEEE
Confidence            35799999999999999999999999999888766555444444443322  11111111      12245789999999


Q ss_pred             cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      .++++.. ++..+|++.|+++..+|.++..+..+++||+|||||+|||+...+
T Consensus        75 ~~~~~~~-~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          75 ETWEDLL-RAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             SCHHHHH-HHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             eeehhhh-hHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence            9855333 223445999999998888876655789999999999999997654

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.77  E-value=1.9e-18  Score=128.86  Aligned_cols=123  Identities=15%  Similarity=0.231  Sum_probs=89.6

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCC-----------CcceeEEEecccccccceeEeecc---ccCccc
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-----------EYKYTLAMLGYAEEDQTTVLELTY---NYGVTE  216 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~---~~~~~~  216 (291)
                      ..+++|++|.|+|++++.+||++ |||++..+....           .......++...+.  ...+.+..   ......
T Consensus         7 ~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~~~~~~~~~~   83 (149)
T d1ss4a_           7 LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG--HSRIELSRFLTPPTIAD   83 (149)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS--SCEEEEEEEEESCCCCB
T ss_pred             CCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeeccc--ceEEEEEeeccccCccc
Confidence            35799999999999999999998 999988764321           22334555553332  23333322   111111


Q ss_pred             ----cccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          217 ----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       217 ----~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                          .....|.+|++|.|+|++++.++|    +++|+++..+|...++ +.+++|++||||+.|||+|.
T Consensus        84 ~~~~~~~~~g~~hi~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          84 HRTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHH----HHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEE
T ss_pred             ccccCCCCcceeEEEEeechhHHHHHHH----HHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEc
Confidence                123357899999999999999999    9999999988876654 46889999999999999984

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.77  E-value=3.5e-18  Score=126.80  Aligned_cols=129  Identities=14%  Similarity=0.132  Sum_probs=85.7

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCC-cceeEEEecccccccceeEeeccccCcccc-ccCcceeeEEE
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVTEY-TKGNAYAQVAI  228 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~~~~h~~f  228 (291)
                      ..+++||+|.|+|++++.+||+++||+++..+....+ ......+++.........+.+.......+. ...+++.|++|
T Consensus         4 i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hiaf   83 (144)
T d1zswa1           4 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGL   83 (144)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEE
T ss_pred             ccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEEE
Confidence            4579999999999999999999999999887755433 223333344333223334444332222121 22346899999


Q ss_pred             EecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          229 STDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      .|+|. +.+.++..++++.|+.+. .+..+.  +.+++||+|||||+|||+++.+
T Consensus        84 ~v~~~-~~l~~~~~~l~~~gv~~~-~~~~~~--~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          84 LVPSE-DSLHYWKERFEKFDVKHS-EMTTYA--NRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             EESCH-HHHHHHHHHHHHTTCEEC-CSEEET--TEEEEEEECTTCCEEEEEECTT
T ss_pred             ecCCc-hhHHHHhhhhhccceeee-CccccC--CeEEEEEECCCCCEEEEEEeCC
Confidence            99993 223333344499999874 344443  3688999999999999998765

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=8.4e-18  Score=129.04  Aligned_cols=129  Identities=29%  Similarity=0.503  Sum_probs=95.1

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCc-----------------ceEEEeeec
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS-----------------HFVVELTYN   81 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~-----------------~~~l~~~~~   81 (291)
                      +..-+++|++|.|+|+++|++||+++|||++......+...+...+...+....                 ...+.....
T Consensus        19 ~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (176)
T d1qipa_          19 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG   98 (176)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeec
Confidence            335679999999999999999999999999988877777777777664332111                 111111111


Q ss_pred             C---CCcc----ccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           82 Y---GVTS----YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        82 ~---~~~~----~~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .   ....    .....++.|+|+.++|+++++++|+++|+++..++........  +|++||||+.|||+|..+
T Consensus        99 ~~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~--~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_          99 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGL--AFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             GGGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTC--EEEECTTCCEEEEECTTT
T ss_pred             cccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEE--EEEECCCCCEEEEEeCCC
Confidence            1   1111    1133588999999999999999999999999998876554332  788999999999999874

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.77  E-value=2.5e-18  Score=131.03  Aligned_cols=123  Identities=14%  Similarity=0.034  Sum_probs=83.0

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      ..+++||+|.|+|++++.+||+++|||++..+...    ...+....+.  ....+.+.........+...+++|++|.|
T Consensus        10 I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~HiAf~V   83 (170)
T d1zswa2          10 IQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ----EAIFQSIKGE--AFGEIVVKYLDGPTEKPGRGSIHHLAIRV   83 (170)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS----EEEEESSTTC--STTCEEEEECCSSBCBCCBTCEEEEEEEE
T ss_pred             hCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCc----eEEEEeccCc--cceEEEeccccccccccCccccceEEEEe
Confidence            35799999999999999999999999999876421    2333333222  22222222222222222334789999999


Q ss_pred             cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      +| .+.+.++..+++++|+++. ++..+.+  .+.+||+|||||+|||+..++
T Consensus        84 ~~-~~~l~~~~~~l~~~G~~~~-~~~~~~~--~~s~Yf~DPdG~~iEl~t~~p  132 (170)
T d1zswa2          84 KN-DAELAYWEEQVKQRGFHSS-GIIDRFY--FKSLYFRESNGILFEIATDGP  132 (170)
T ss_dssp             SS-HHHHHHHHHHHHHTTCCCC-CCEECSS--EEEEEEECTTCCEEEEEEEEE
T ss_pred             CC-hHHHHHHHHHHHhcCCCcc-ccccCCC--EEEEEEECCCCcEEEEEECCC
Confidence            98 4444555566699999874 3443433  588999999999999998643

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.76  E-value=1.2e-17  Score=127.19  Aligned_cols=121  Identities=18%  Similarity=0.221  Sum_probs=83.7

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      ..+.+|+||.|.|+|++++.+||+++|||++..+..    ... .+...+...... +.+.............+++|+||
T Consensus         8 ~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~HiAf   81 (170)
T d1zswa2           8 HQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEA-IFQSIKGEAFGE-IVVKYLDGPTEKPGRGSIHHLAI   81 (170)
T ss_dssp             GSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEE-EEESSTTCSTTC-EEEEECCSSBCBCCBTCEEEEEE
T ss_pred             HHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ceE-EEEeccCccceE-EEeccccccccccCccccceEEE
Confidence            358999999999999999999999999999987633    222 333222222222 22222222222222336889999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+|   ++++++++.+.|+.+. ++....  ...++||+|||||+|||+...
T Consensus        82 ~V~~~~~l~~~~~~l~~~G~~~~-~~~~~~--~~~s~Yf~DPdG~~iEl~t~~  131 (170)
T d1zswa2          82 RVKNDAELAYWEEQVKQRGFHSS-GIIDRF--YFKSLYFRESNGILFEIATDG  131 (170)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCC-CCEECS--SEEEEEEECTTCCEEEEEEEE
T ss_pred             EeCChHHHHHHHHHHHhcCCCcc-ccccCC--CEEEEEEECCCCcEEEEEECC
Confidence            9976   7789999999999864 333333  334589999999999999864

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.76  E-value=1.4e-17  Score=123.73  Aligned_cols=118  Identities=19%  Similarity=0.255  Sum_probs=87.1

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      ..+++|+||.|.|+|++++++||+++|||++.....   +   ..++........+.+.+...       ...++.|++|
T Consensus        12 ~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~-------~~~~~~h~~~   78 (146)
T d1f1ua1          12 PDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE---N---TIYLRSLEEFIHHNLVLRQG-------PIAAVAAFAY   78 (146)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS---S---EEEEECTTCCSSCSEEEEEC-------SSCEEEEEEE
T ss_pred             CCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC---C---ceeeecccccccceeecccc-------CCCCCceeeE
Confidence            459999999999999999999999999999986533   1   23333222222222222222       2347889999


Q ss_pred             EeC---CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           99 ATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        99 ~v~---di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .+.   |+++++++|+++|+++...+.....|...++||+||+|+.|||+...+
T Consensus        79 ~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e  132 (146)
T d1f1ua1          79 RVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETE  132 (146)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             eeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEecc
Confidence            995   688999999999999887766666554445899999999999998654

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=4.1e-18  Score=127.17  Aligned_cols=132  Identities=18%  Similarity=0.245  Sum_probs=94.9

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCcc-----ccCCCCc
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS-----YDIGTGF   93 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~   93 (291)
                      ..+.+|+||+|.|+|+++|++||+++|||+.......+.......++.+..+...+.+.........+     ..++.|+
T Consensus         7 ~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G~   86 (149)
T d1sqia1           7 GRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGV   86 (149)
T ss_dssp             CEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEE
T ss_pred             CceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCeE
Confidence            45899999999999999999999999999998876554433223333222333333333222221111     1257799


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeeecCCccCCC--CceEEEEEECCCCCEEEEEEcCCC
Q 022835           94 GHFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        94 ~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      .|+||.|+|+++++++|+++|+++..+|....+  |...+++++.|+|..++|+|.+..
T Consensus        87 ~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~  145 (149)
T d1sqia1          87 KDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINY  145 (149)
T ss_dssp             EEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESC
T ss_pred             EEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCC
Confidence            999999999999999999999998888766543  333456778899999999998653

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=4.6e-18  Score=130.52  Aligned_cols=128  Identities=27%  Similarity=0.484  Sum_probs=92.1

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEeccccccc-----------------ceeEeecccc--
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQ-----------------TTVLELTYNY--  212 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~l~l~~~~--  212 (291)
                      .+++|+.|.|+|++++++||+++|||++..+......+..+.+........                 ...+......  
T Consensus        22 ~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (176)
T d1qipa_          22 FLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTED  101 (176)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGG
T ss_pred             eEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeecccc
Confidence            359999999999999999999999999887665555555555554322110                 0011111111  


Q ss_pred             -Cccc----cccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhH
Q 022835          213 -GVTE----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       213 -~~~~----~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~  285 (291)
                       ....    .....++.|++|.++|++++.++|    +++|+++..+|...++  .+++||+|||||+|||+|+..+.
T Consensus       102 ~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l----~~~Gv~~~~~p~~g~~--~~~~f~~DPdG~~IElvq~~~~~  173 (176)
T d1qipa_         102 DETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKMA  173 (176)
T ss_dssp             CTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHH----HHTTCEEEECTTSSSS--TTCEEEECTTCCEEEEECTTTGG
T ss_pred             ccCcCccCCCCCccceeEEEeeHHHHHHHHHHH----HHCCCEEeeCCccCCc--eEEEEEECCCCCEEEEEeCCCCC
Confidence             0000    112348899999999999999999    9999999998876443  46788999999999999998764

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.75  E-value=5.9e-18  Score=125.49  Aligned_cols=127  Identities=14%  Similarity=0.150  Sum_probs=88.9

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecc--cccccceeEeeccccCccc--------cccCc
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGY--AEEDQTTVLELTYNYGVTE--------YTKGN  221 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~l~~~~~~~~--------~~~~~  221 (291)
                      .+++|++|.|+|++++.+||+++||+++.........+........  ........+++........        .....
T Consensus         6 ~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~   85 (145)
T d1jc4a_           6 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRA   85 (145)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCC
T ss_pred             eEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCCC
Confidence            5799999999999999999999999998876554433333322221  0112344566654322211        12345


Q ss_pred             ceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEE--ECCCCceEEEecch
Q 022835          222 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSF--VDPDGWKTVLVDNE  282 (291)
Q Consensus       222 ~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~--~DPdG~~ie~~~~~  282 (291)
                      |++|++|.|+|+++++++|    +++|++++.++......+.+.+|+  +||+|++|||+|.+
T Consensus        86 g~~Hia~~v~di~~~~~~l----~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          86 GLHHMAWRVDDIDAVSATL----RERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             EEEEEEEECSCHHHHHHHH----HHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             cceEEEEecchHHHHHHHH----HHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            8999999999999999999    999999876654432223455555  79999999999975

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.75  E-value=6.9e-18  Score=128.37  Aligned_cols=130  Identities=21%  Similarity=0.233  Sum_probs=96.9

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCC------------Ccc
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG------------VTS   86 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~------------~~~   86 (291)
                      ..+.+|+||+|.|+|++++++||+++|||++..+...+...........+++...+++.......            ..+
T Consensus         8 ~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~   87 (167)
T d1sqda1           8 FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIP   87 (167)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSST
T ss_pred             CCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccccccccc
Confidence            56999999999999999999999999999998876654443333333333333444333221100            000


Q ss_pred             -----------ccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           87 -----------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        87 -----------~~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                                 ..++.|+.|+||.|+|+++++++|+++|+++..+|....++.+ +++++.+++..++|+++..
T Consensus        88 ~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~-~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          88 SFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVT-IAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             TCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEE-EEEEEEETTEEEEEEEECC
T ss_pred             cCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEE-EEEEEccCCcEEEEEecCC
Confidence                       0135689999999999999999999999999999988877654 4788999999999999874

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.74  E-value=1.2e-17  Score=126.43  Aligned_cols=129  Identities=20%  Similarity=0.274  Sum_probs=94.3

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCC--ceEEEEEecCCCCcceEEEeeecCCCc------c--cc
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGVT------S--YD   88 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~l~~~~~~~~~------~--~~   88 (291)
                      ..+.+|+||.|.|+|++++++||+++|||+++.....+..  ....+.++  ++...+.+.........      +  ..
T Consensus         3 ~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~--~~~~~i~l~~~~~~~~~~~~~~~~~~~~   80 (163)
T d1t47a1           3 FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLT--NGSARFVLTSVIKPATPWGHFLADHVAE   80 (163)
T ss_dssp             SCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEE--ETTEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEe--cCCEEEEEeccCCCCCccccccchhhhc
Confidence            4589999999999999999999999999999887654433  23334444  33333333222111111      1  12


Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCC--CceEEEEEECCCCCEEEEEEcCC
Q 022835           89 IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        89 ~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .+.|+.|+||.|+|+++++++|+++|+++..+|....+  |...+.++++|+|..++|++...
T Consensus        81 ~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~  143 (163)
T d1t47a1          81 HGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  143 (163)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             CCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccC
Confidence            56799999999999999999999999999888776543  33445789999999999998753

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.74  E-value=1.3e-17  Score=127.69  Aligned_cols=122  Identities=17%  Similarity=0.146  Sum_probs=90.5

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      ..+|+||+|.|+|++++++|| ++|||+++++....++....++...+..  ...+.+..       ...++.+|++|.+
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~--~~~l~~~~-------~~~~~~~H~~f~~   72 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTG-------GNGPRMHHVAFAT   72 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEE-------SSBSEEEEEEEEC
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcc--ccceeccc-------ccCCCccceeEEe
Confidence            457999999999999999999 6899999988776666555666664332  33343322       1235889999999


Q ss_pred             cchHHHHHHHHHHHHHhCCee--ccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          231 DDVYKSAEVVNLVTQELGGKI--TRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~--~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      .++++..+.+ .+++++|+..  ...|+++..+...++||+|||||+|||+...+
T Consensus        73 ~~~~~v~~~~-~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          73 HEKHNIIQIC-DKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             SSHHHHHHHH-HHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             ccchhHHHHH-HHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence            9866655544 4458899854  45677776656788999999999999987654

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.74  E-value=2.3e-17  Score=120.11  Aligned_cols=120  Identities=18%  Similarity=0.237  Sum_probs=84.3

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCC-ceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      |+.+|+||.|.|+|++++.+||+++|||++......... .....++..+.    ..+.+.....    ....+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD----IWVAIMQGEK----LAERSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETT----EEEEEEECCC----CSSCCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCC----EEEeeccccc----ccccceeeeee
Confidence            678999999999999999999999999999877554322 23334444332    2333333221    12346678998


Q ss_pred             Ee--CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           99 AT--EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v--~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .+  +|+++++++|+++|+++..++....++.+. +||+|||||+|||....
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~~-~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRS-IYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CCE-EEEECTTSCEEEEECCC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccCCCEEE-EEEECCCCCEEEEEECC
Confidence            77  479999999999999987665544444444 89999999999997653

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.73  E-value=4.2e-18  Score=125.26  Aligned_cols=119  Identities=19%  Similarity=0.348  Sum_probs=82.5

Q ss_pred             EeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecc---h
Q 022835          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD---V  233 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d---~  233 (291)
                      |.+.|.|++++.+||+++|||++..+....+ ++.++++..+.  ....+.+....+......+.+..|++|.|+|   +
T Consensus        13 Va~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~hlaf~v~~~~dv   89 (137)
T d1twua_          13 IARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPH--ADYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVEL   89 (137)
T ss_dssp             EEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSS--SSEEEEEEEETTCCCCCCCCTTCEEEEECCCHHHH
T ss_pred             EecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCC--CceeeecccccccccccccccCceEEEEeCCHHHH
Confidence            4445579999999999999999987754333 35666666443  2344555444333333344567899999987   4


Q ss_pred             HHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhh
Q 022835          234 YKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~  284 (291)
                      ++++++|    +++|++++.++...  .+.+.+||+||||++|||+..+.+
T Consensus        90 ~~~~~~l----~~~G~~~~~~~~~~--~~~~~~~f~DPDG~~Iel~~~~~~  134 (137)
T d1twua_          90 AAITSKL----KHMGYQEVESENPY--WSNGGVTIEDPDGWRIVFMNSKGI  134 (137)
T ss_dssp             HHHHHHH----HHTTCCEECCSSHH--HHSSEEEEECTTCCEEEEESSCCC
T ss_pred             HHHHHHH----HHCCCeEeCCCCCC--CCceEEEEECCCCCEEEEEcCCCC
Confidence            4444555    99999988665432  235789999999999999987654

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.73  E-value=2.1e-17  Score=120.40  Aligned_cols=113  Identities=15%  Similarity=0.194  Sum_probs=84.8

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEe
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v  100 (291)
                      |++|+||+|.|+|++++++||+++|||++..+..      ...+++.+.....+.  +...       ...++.|++|.|
T Consensus         2 I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~--l~~~-------~~~~~~h~~f~v   66 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIA--VQQG-------EVDDLAFAGYEV   66 (131)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEE--EEEC-------TTCEEEEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCCceEEE--EecC-------CCCCceEEEEEE
Confidence            7899999999999999999999999999987643      146676654333333  3322       224788999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCccCC--CCceEEEEEECCCCCEEEEEEcC
Q 022835          101 E---DVYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~---di~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .   +++++.++|+++|+++...+....  .+...++||+||+||.|||+...
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~  119 (131)
T d1lgta1          67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (131)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             ccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCC
Confidence            5   467899999999999887654332  12233489999999999998764

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.73  E-value=2.4e-17  Score=116.90  Aligned_cols=111  Identities=15%  Similarity=0.142  Sum_probs=76.7

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .+++|+.|.|+|++++.+||+++|||++..+..   .  ..++...+   .+..+.+.....    ...++..|++|.|+
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~~---~~~~~~~~~~~~----~~~~~~~h~~f~v~   69 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRDN---DGFILTLMKGKE----VQYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEECT---TCCEEEEEECSS----CCCCTTCCEEEECS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeec---C--cceeeeec---ceeeeeeeeeec----ccccccceeeeeec
Confidence            478999999999999999999999999877642   1  22233321   234444433222    12346789999999


Q ss_pred             chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEe
Q 022835          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~  279 (291)
                      |.+ .++++.++++++|+++..+|..    +++.+||+|||||+|||+
T Consensus        70 ~~~-~v~~~~~~l~~~G~~~~~~~~~----~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          70 SEE-QVDKINQRLKEDGFLVEPPKHA----HAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHH-HHHHHHHHHHHTTCCCCCCEEC-----CEEEEEEETTTEEEEEE
T ss_pred             ccc-chhhhhhhHHHcCCccccCCCC----ceEEEEEECCCCCEEEEE
Confidence            833 3333335559999997655432    357899999999999995

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.73  E-value=3.9e-17  Score=119.73  Aligned_cols=127  Identities=43%  Similarity=0.706  Sum_probs=88.7

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .++.|+.|.|.|++++++||+++|||++..+..........................................++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            47899999999999999999999999998876554444444333322111111111111111111223446778999999


Q ss_pred             chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhHHh
Q 022835          232 DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKE  287 (291)
Q Consensus       232 d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~~~  287 (291)
                      ++....+.+    ...++++...+.     +.+++||+|||||+|||++.++..+.
T Consensus        82 ~~~~~~~~~----~~~~~~~~~~~~-----g~~~~~~~DPdGn~iEl~~~~~~~~~  128 (139)
T d2c21a1          82 DVKELVADM----RKHDVPIDYEDE-----SGFMAFVVDPDGYYIELLNEKTMMEK  128 (139)
T ss_dssp             CHHHHHHHH----HHTTCCEEEECS-----SSSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred             hHHHHHHHH----HHcCCceeeCCC-----CcEEEEEECCCCCEEEEEECCCCCCc
Confidence            999999999    889888765543     35889999999999999999887664

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.72  E-value=1.6e-17  Score=123.50  Aligned_cols=119  Identities=19%  Similarity=0.185  Sum_probs=84.8

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      +.++.|+.|.|+|++++++||+++|||++..+...     ...+...... ....+.+..       ...++..|++|.+
T Consensus        14 i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~-------~~~~~~~h~~~~~   80 (146)
T d1f1ua1          14 IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDEN-----TIYLRSLEEF-IHHNLVLRQ-------GPIAAVAAFAYRV   80 (146)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECSS-----EEEEECTTCC-SSCSEEEEE-------CSSCEEEEEEEEE
T ss_pred             CcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecCC-----ceeeeccccc-ccceeeccc-------cCCCCCceeeEee
Confidence            45699999999999999999999999998875321     2222222121 122222211       1234789999999


Q ss_pred             cc---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhHH
Q 022835          231 DD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       231 ~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~~  286 (291)
                      .+   ++++.++|    +++|+++...|.....+.++++||+|||||+|||+.+.+..+
T Consensus        81 ~~~~dl~~~~~~l----~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e~~~  135 (146)
T d1f1ua1          81 KSPAEVDAAEAYY----KELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEHVE  135 (146)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCC
T ss_pred             ccchhHHHHHHHH----HHcCCceeeccccccCCceEEEEEECCCCcEEEEEEeccccC
Confidence            75   55555555    999999988887766555688999999999999998765544

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.72  E-value=3.5e-17  Score=124.93  Aligned_cols=131  Identities=17%  Similarity=0.166  Sum_probs=97.6

Q ss_pred             CCCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCc------------
Q 022835           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT------------   85 (291)
Q Consensus        18 ~~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~------------   85 (291)
                      ...+++++||+|.|+|++++++||+++|||+++.+...............+++...+.+.........            
T Consensus         8 ~~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (172)
T d1sp8a1           8 RFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAA   87 (172)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHH
T ss_pred             cCCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcc
Confidence            35699999999999999999999999999999887665444333333223333444444322211100            


Q ss_pred             ---c--ccCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           86 ---S--YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        86 ---~--~~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                         .  ..++.|+.|+||.|+|+++++++|+++|+++..+|....+|.+ +++++.+.+..++|++..+
T Consensus        88 ~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~-~a~v~~~g~~~~~lve~~~  155 (172)
T d1sp8a1          88 AARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFR-LAEVELYGDVVLRYVSYPD  155 (172)
T ss_dssp             HHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEE-EEEEEEETTEEEEEEECCT
T ss_pred             hhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEE-EEEEECCCCcEEEEEecCC
Confidence               0  1146799999999999999999999999999999888777654 4778889889999999985

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.71  E-value=8.1e-17  Score=119.40  Aligned_cols=119  Identities=21%  Similarity=0.276  Sum_probs=81.9

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      ..|++|+||.|.|+|++++.+||+++|||++..+.....     .+...........+.+....       ..+..|+++
T Consensus         3 ~~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~   70 (145)
T d1mpya1           3 KGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGR-----VYLKAWTEVDKFSLVLREAD-------EPGMDFMGF   70 (145)
T ss_dssp             TSEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTSC-----EEEECTTCCBSCSEEEEECS-------SCEEEEEEE
T ss_pred             cCCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccCc-----cceecccccceeeccccccC-------cccceeeee
Confidence            458999999999999999999999999999876633211     22222222222222232221       124456665


Q ss_pred             Ee---CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835           99 AT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        99 ~v---~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .+   +|+++++++|+++|+++...+.....|....+||+||+||.|||+....
T Consensus        71 ~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e  124 (145)
T d1mpya1          71 KVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (145)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             eehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecc
Confidence            54   6799999999999999876554444444345999999999999997654

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.71  E-value=2.9e-17  Score=116.03  Aligned_cols=110  Identities=20%  Similarity=0.290  Sum_probs=80.6

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeC
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~  101 (291)
                      +++ +..|.|+|++++.+||+++|||++....+    .+  ..+..+. .....+..... .    ..+.+..|++|.++
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~--~~~~~~~-~~~~~~~~~~~-~----~~~~~~~~~~~~~~   68 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHG----WI--VTHASPL-EAHAQVSFARE-G----GSGTDVPDLSIEVD   68 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS----SE--EEEEEEE-EEEEEEEEESS-S----BTTBCCCSEEEEES
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeeccc----ce--eEecccc-ccceeeecccc-c----CCCCceeEEEEEec
Confidence            456 58899999999999999999999876533    11  2222211 11111211111 1    12334568999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEE
Q 022835          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       102 di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      |+++++++++++|+++..+|...++|.+. ++++||+||+|||+
T Consensus        69 dvd~~~~~l~~~g~~~~~~p~~~~~g~~~-~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          69 NFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLINIL  111 (111)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEECTTSCEE-EEEECTTSCEEEEE
T ss_pred             CHHHHHHHHHhhccccccCCeEcCCCcEE-EEEECCCCCEEEeC
Confidence            99999999999999999889999988765 89999999999985

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.71  E-value=9e-17  Score=113.83  Aligned_cols=108  Identities=19%  Similarity=0.254  Sum_probs=77.3

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeC
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~  101 (291)
                      |+|+||.|.|+|++++.+||+++|||++..+...   .  ..++. ++.  ...+.+......    ...+..|++|.|+
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~---~--~~~~~-~~~--~~~~~~~~~~~~----~~~~~~h~~f~v~   69 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN---A--FAVMR-DND--GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT---T--EEEEE-CTT--CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC---c--ceeee-ecc--eeeeeeeeeecc----cccccceeeeeec
Confidence            6899999999999999999999999999766432   1  23333 222  233434333221    2336789999997


Q ss_pred             C---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEE
Q 022835          102 D---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       102 d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      |   +++++++++++|+++..++.  .. .+ .+||+||+|++|||.
T Consensus        70 ~~~~v~~~~~~l~~~G~~~~~~~~--~~-~~-~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          70 SEEQVDKINQRLKEDGFLVEPPKH--AH-AY-TFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCCCEE--C--CE-EEEEEETTTEEEEEE
T ss_pred             cccchhhhhhhHHHcCCccccCCC--Cc-eE-EEEEECCCCCEEEEE
Confidence            6   67899999999999765433  22 23 489999999999985

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.71  E-value=1.7e-16  Score=116.91  Aligned_cols=116  Identities=20%  Similarity=0.323  Sum_probs=83.1

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      |+.+|+||.|.|+|++++.+||+++|||++......      ..++..++  ....+.+...... ......+..|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~------~~~~~~~~--~~~~l~~~~~~~~-~~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCGD--LWVCLSYDEARQY-VPPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT------EEEEEETT--EEEEEEECTTCCC-CCGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc------cccccccc--ccceeeccccccc-CCCcCCccceeeee
Confidence            688999999999999999999999999999766432      23444332  2333333322221 12233456788887


Q ss_pred             e--CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          100 T--EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v--~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +  +|+++++++|+++|+++...+.   ++.. .+||+|||||.|||....
T Consensus        72 ~~~~d~~~~~~~l~~~Gv~~~~~~~---~~~~-~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          72 VAEEDFEPLSQRLEQAGVTIWKQNK---SEGA-SFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCC---SSSE-EEEEECTTCCEEEEEECC
T ss_pred             chHHHHHHHHHHHHHCCCeEeecCC---CCce-EEEEECCCCCEEEEEECC
Confidence            7  6899999999999999876543   2333 489999999999998754

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.71  E-value=6.4e-17  Score=117.67  Aligned_cols=117  Identities=18%  Similarity=0.214  Sum_probs=80.6

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCc-ceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      +++|+.|.|+|++++.+||+++|||++..+...... .....++...    +..+.+.....    ....+..|++|.|+
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~f~v~   75 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIG----DIWVAIMQGEK----LAERSYNHIAFKID   75 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEET----TEEEEEEECCC----CSSCCSCEEEEECC
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecC----CEEEeeccccc----ccccceeeeeeccc
Confidence            589999999999999999999999998876543321 1222233321    23344433211    12346688899775


Q ss_pred             --chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          232 --DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 --d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                        |++++++++    +++|+++..++....+ +++.+||+|||||+|||....
T Consensus        76 ~~dv~~~~~~l----~~~gv~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          76 DADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             GGGHHHHHHHH----HHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             HHHHHHHHHHH----HHCCCeEecCCcccCC-CEEEEEEECCCCCEEEEEECC
Confidence              688888888    9999998877655443 468899999999999997654

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.71  E-value=3.8e-16  Score=114.30  Aligned_cols=122  Identities=57%  Similarity=0.937  Sum_probs=87.9

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeC
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~  101 (291)
                      +||.||+|.|+|++++++||+++|||++.............................................++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            68999999999999999999999999998876655544444444333222222222222222333334556778899999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ++.++++++...++.+...+    ++.. ++||+|||||+|||++..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~----~g~~-~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          82 DVKELVADMRKHDVPIDYED----ESGF-MAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             CHHHHHHHHHHTTCCEEEEC----SSSS-EEEEECTTSCEEEEEEHH
T ss_pred             hHHHHHHHHHHcCCceeeCC----CCcE-EEEEECCCCCEEEEEECC
Confidence            99999999999998876543    3444 389999999999999864

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.71  E-value=8.4e-17  Score=117.32  Aligned_cols=113  Identities=15%  Similarity=0.157  Sum_probs=85.0

Q ss_pred             cceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEe
Q 022835           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v  100 (291)
                      |.+|+||+|.|+|++++.+||+++|||++..+..      ...+++.++....+.+  ...       ...+..|++|.|
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~~--~~~-------~~~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAV--QPG-------ELDDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEE--EEC-------TTCEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeecceeeee--ecc-------CCCCceEEEEEe
Confidence            7899999999999999999999999999876643      1466766544333333  222       234789999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCccCCC--CceEEEEEECCCCCEEEEEEcC
Q 022835          101 E---DVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~---di~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .   +++++.++++++|+.+...+.....  +...++||+||+||.|||+...
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~  119 (132)
T d1kw3b1          67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (132)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             ccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECC
Confidence            5   5788999999999998876543321  1123489999999999998764

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.70  E-value=1.9e-16  Score=115.70  Aligned_cols=112  Identities=22%  Similarity=0.325  Sum_probs=78.6

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      |+.+|+||.|.|+|++++.+||+++||+++..+...      ..++..++  .  .+........  .....+..|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~------~~~~~~~~--~--~~~~~~~~~~--~~~~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ------GAYLELGS--L--WLCLSREPQY--GGPAADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEEETT--E--EEEEEECTTC--CCCCSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc------eeeeecCC--e--EEEEeeeccc--cccccccccchhc
Confidence            688999999999999999999999999998776442      24444432  1  2222221111  1123344566655


Q ss_pred             e--CCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835          100 T--EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       100 v--~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      +  +|+++++++|+++|+++...+.  .. .. .+||+|||||+|||...
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~--~~-~~-~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQNR--SE-GD-SFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCC--SS-SC-EEEEECTTCCEEEEESC
T ss_pred             cccchHHHHHHHHHHCCCcCccCCC--cc-ee-EEEEECCCCCEEEEEEC
Confidence            5  7899999999999999765432  22 33 38999999999999764

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.70  E-value=6.7e-17  Score=117.24  Aligned_cols=120  Identities=19%  Similarity=0.174  Sum_probs=83.9

Q ss_pred             ceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeec----CCCccccCCCCceEEE
Q 022835           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN----YGVTSYDIGTGFGHFA   97 (291)
Q Consensus        22 ~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~i~   97 (291)
                      .+|+||+|.|+|++++++||++ |||.+......+.    .+.+..+ +...+.+.....    ........+.+..|++
T Consensus         1 ~ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   74 (128)
T d1klla_           1 ARISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP----HTEAVLD-GGIRLAWDTVETVRSYDPEWQAPTGGHRFAIA   74 (128)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS----EEEEECG-GGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEE
T ss_pred             CeEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc----ceeeecc-ceeeeeecccccccccCCCCCCCccccceeEe
Confidence            3789999999999999999988 8998765433222    2333222 222222221111    0111112233557999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           98 IATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |.|.+   +++++++|+++|+++..+|...++|.+. +||+|||||+|||.++-
T Consensus        75 ~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~-~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          75 FEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEE-EEEECTTSCEEEEEEEC
T ss_pred             eeeccchhhHHHHHHHHhccCccccCCeEcCCCcEE-EEEECCCCCEEEEEecC
Confidence            99976   6779999999999999999888888765 89999999999999864

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.70  E-value=9.7e-17  Score=120.32  Aligned_cols=122  Identities=12%  Similarity=0.094  Sum_probs=85.9

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCC---CcceeEEEecccccccceeEeeccccCccccccCcceeeEE
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP---EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVA  227 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~  227 (291)
                      +.++.|+.|.|+|++++.+||+++|||++.++....   .......++.....  .+.+....      .+..++++|++
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~a~~~------~~~~~gl~Hia   79 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAA------FPIPKRIHHFM   79 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEEC------CSCSSSEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccc--cceeeecc------CCCCCceeEEE
Confidence            357999999999999999999999999988764321   22233444554332  22222221      12235899999


Q ss_pred             EEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCc-eEEEecch
Q 022835          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGW-KTVLVDNE  282 (291)
Q Consensus       228 f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~-~ie~~~~~  282 (291)
                      |.|+|+++..+.. .+|+++|+.+ ..|+++..+...++|++||||+ .+|+.-..
T Consensus        80 f~v~~~ddv~~~~-d~l~~~G~~~-~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~  133 (156)
T d1kw3b2          80 LQANTIDDVGYAF-DRLDAAGRIT-SLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  133 (156)
T ss_dssp             EEBSSHHHHHHHH-HHHHHTTCBC-BCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EECCCHHHHHHHH-HHHHhcCCce-ecCcccCCCCeEEEEEECCCCCeEEEEecCC
Confidence            9999866654443 5669999865 6788876655789999999998 59997643

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.70  E-value=2.6e-16  Score=115.46  Aligned_cols=118  Identities=16%  Similarity=0.304  Sum_probs=85.1

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCC---
Q 022835           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED---  102 (291)
Q Consensus        26 hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~d---  102 (291)
                      .|++.|+|++++.+||+++|||++..+...+ .++..+++..+  ...+.+.+...........+.+..|++|.|++   
T Consensus        12 RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~hlaf~v~~~~d   88 (137)
T d1twua_          12 RIARPTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGLP--HADYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVE   88 (137)
T ss_dssp             EEEEECSCHHHHHHHHTTTSCCCEEEEEEEE-TTEEEEEEESS--SSSEEEEEEEETTCCCCCCCCTTCEEEEECCCHHH
T ss_pred             EEecccCCHHHHHHHHHhccCCceeeeeccc-cceeEEEecCC--CCceeeecccccccccccccccCceEEEEeCCHHH
Confidence            4555678999999999999999998765433 34556666544  33455555555444333344467899999865   


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          103 VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       103 i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +++++++|+++|+++..++... ++... +||+||||++|||....
T Consensus        89 v~~~~~~l~~~G~~~~~~~~~~-~~~~~-~~f~DPDG~~Iel~~~~  132 (137)
T d1twua_          89 LAAITSKLKHMGYQEVESENPY-WSNGG-VTIEDPDGWRIVFMNSK  132 (137)
T ss_dssp             HHHHHHHHHHTTCCEECCSSHH-HHSSE-EEEECTTCCEEEEESSC
T ss_pred             HHHHHHHHHHCCCeEeCCCCCC-CCceE-EEEECCCCCEEEEEcCC
Confidence            7889999999999988765432 33343 89999999999999765

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.70  E-value=8.8e-17  Score=113.46  Aligned_cols=107  Identities=16%  Similarity=0.151  Sum_probs=78.6

Q ss_pred             eEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHH
Q 022835          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~  235 (291)
                      +..|.|.|++++++||+++|||++.....    .+..+ .. ... ....+.. ...+    ..+.+..|++|.|+|+++
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~~~~-~~-~~~-~~~~~~~-~~~~----~~~~~~~~~~~~~~dvd~   72 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHG----WIVTH-AS-PLE-AHAQVSF-AREG----GSGTDVPDLSIEVDNFDE   72 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECS----SEEEE-EE-EEE-EEEEEEE-ESSS----BTTBCCCSEEEEESCHHH
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeeccc----ceeEe-cc-ccc-cceeeec-cccc----CCCCceeEEEEEecCHHH
Confidence            57899999999999999999999876532    12222 22 111 1111111 1111    223466899999999999


Q ss_pred             HHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEe
Q 022835          236 SAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~  279 (291)
                      +.+++    +++|+++..+|...++ +.+.+|++|||||+|||+
T Consensus        73 ~~~~l----~~~g~~~~~~p~~~~~-g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          73 VHARI----LKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHH----HHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             HHHHH----HhhccccccCCeEcCC-CcEEEEEECCCCCEEEeC
Confidence            99999    9999999999988776 468999999999999986

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.69  E-value=9.6e-17  Score=116.87  Aligned_cols=110  Identities=16%  Similarity=0.176  Sum_probs=79.9

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecc
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d  232 (291)
                      .+.|+.|.|+|++++++||+++|||++..+..      ...+++.+..  ...+.+..       ...++..|++|.|.+
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~l~l~~-------~~~~~~~h~~f~v~~   68 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSR--AWRIAVQQ-------GEVDDLAFAGYEVAD   68 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSB--SCSEEEEE-------CTTCEEEEEEEEESS
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCC--ceEEEEec-------CCCCCceEEEEEEcc
Confidence            58999999999999999999999999887632      2233454332  33344432       123478999999976


Q ss_pred             ---hHHHHHHHHHHHHHhCCeeccCCccCC--CCCceEEEEECCCCceEEEecc
Q 022835          233 ---VYKSAEVVNLVTQELGGKITRQPGPIP--GLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 ---~~~~~~~l~~~~~~~G~~~~~~p~~~~--~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                         ++++.++|    +++|+++...|....  .+..+++||+|||||+||++-.
T Consensus        69 ~~dl~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~  118 (131)
T d1lgta1          69 AAGLAQMADKL----KQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYG  118 (131)
T ss_dssp             HHHHHHHHHHH----HHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHHH----HHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeC
Confidence               44445555    999999998876532  1235789999999999999754

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.68  E-value=1.3e-16  Score=118.34  Aligned_cols=118  Identities=15%  Similarity=0.186  Sum_probs=79.4

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEec
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~  231 (291)
                      .++.||.|.|+|++++.+||+++|||++..+....   .... ... .......+.+...       ..++..|++|.+.
T Consensus         6 ~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~---~~~~-~~~-~~~~~~~~~~~~~-------~~~~~~~~~~~~~   73 (145)
T d1mpya1           6 MRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQG---RVYL-KAW-TEVDKFSLVLREA-------DEPGMDFMGFKVV   73 (145)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTS---CEEE-ECT-TCCBSCSEEEEEC-------SSCEEEEEEEEES
T ss_pred             cEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccC---ccce-ecc-cccceeecccccc-------Ccccceeeeeeeh
Confidence            46899999999999999999999999988763321   1111 111 1111222222211       1234566666655


Q ss_pred             ---chHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhH
Q 022835          232 ---DVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       232 ---d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~  285 (291)
                         |++++.++|    +++|+++...|.....+.++++||+|||||.|||+...+..
T Consensus        74 ~~~dl~~~~~~L----~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e~~  126 (145)
T d1mpya1          74 DEDALRQLERDL----MAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEYT  126 (145)
T ss_dssp             CHHHHHHHHHHH----HHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBC
T ss_pred             hHHHHHHHHHHH----HHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecccc
Confidence               555666666    99999988777665443468999999999999999876543

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.68  E-value=1.4e-16  Score=116.04  Aligned_cols=115  Identities=16%  Similarity=0.116  Sum_probs=80.9

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      ..+|.||.|.|+|++++++||+++|||++..+..      ...++..++.  +..+.+..       ...++..|++|.|
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~l~~~~-------~~~~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQR--AWRIAVQP-------GELDDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSB--SCSEEEEE-------CTTCEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeec--ceeeeeec-------cCCCCceEEEEEe
Confidence            3579999999999999999999999999887643      1233444332  23343322       1235789999999


Q ss_pred             cchHHHHHHHHHHHHHhCCeeccCCccCCC--CCceEEEEECCCCceEEEecc
Q 022835          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      .+.+ .++++.++++++|+++...+.....  ...+.+||+|||||+|||+-.
T Consensus        67 ~~~~-dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          67 DDAA-ALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             SSHH-HHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             ccHH-HHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence            7633 2333335559999999987764321  124789999999999999844

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.68  E-value=6.1e-17  Score=117.45  Aligned_cols=117  Identities=21%  Similarity=0.242  Sum_probs=79.6

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeecc-----ccCcc-ccccCcceeeE
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTY-----NYGVT-EYTKGNAYAQV  226 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~-----~~~~~-~~~~~~~~~h~  226 (291)
                      +++|++|.|.|++++.+||++ ||+.+........  +......  +   ...+.+..     ..... ....+.+..|+
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~--~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   73 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP--HTEAVLD--G---GIRLAWDTVETVRSYDPEWQAPTGGHRFAI   73 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS--EEEEECG--G---GCEEEEEEHHHHHHHCTTCCCCCSSCSCEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc--ceeeecc--c---eeeeeecccccccccCCCCCCCccccceeE
Confidence            789999999999999999976 8998765543222  2222222  1   22222211     00110 11223356799


Q ss_pred             EEEecc---hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          227 AISTDD---VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       227 ~f~v~d---~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      +|.|.+   ++++.+++    +++|+++..+|...++ +.+++||+|||||+|||+++-
T Consensus        74 ~~~v~~~~~l~~~~~~l----~~~G~~~~~~p~~~~~-G~~~~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          74 AFEFPDTASVDKKYAEL----VDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             EEECSSHHHHHHHHHHH----HHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEEC
T ss_pred             eeeeccchhhHHHHHHH----HhccCccccCCeEcCC-CcEEEEEECCCCCEEEEEecC
Confidence            999987   44455666    9999999999888776 468999999999999999763

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.67  E-value=9.3e-16  Score=117.22  Aligned_cols=120  Identities=19%  Similarity=0.228  Sum_probs=86.4

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      .+++|+||+|.|+|++++++|| ++|||++..+...+.+....+++..+....  .+.+...       ...+..|++|.
T Consensus         2 ~i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~--~l~~~~~-------~~~~~~H~~f~   71 (176)
T d1f1ua2           2 ELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVH--DTALTGG-------NGPRMHHVAFA   71 (176)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSC--SEEEEES-------SBSEEEEEEEE
T ss_pred             ceeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcccc--ceecccc-------cCCCccceeEE
Confidence            4789999999999999999999 579999987766556555566666443222  2223222       23478999999


Q ss_pred             eCC---HHHHHHHHHHcCCeee--cCCccCCCCceEEEEEECCCCCEEEEEEcCC
Q 022835          100 TED---VYKLVENIRAKGGNVT--REPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       100 v~d---i~~~~~~l~~~G~~~~--~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      +.+   +.++.++|+++|+...  ..|.....|...++||+|||||+|||.....
T Consensus        72 ~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          72 THEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             CSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             eccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence            975   5566788999998643  3344444444456999999999999988764

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.8e-16  Score=118.02  Aligned_cols=126  Identities=17%  Similarity=0.203  Sum_probs=91.5

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcc--eeEEEecccccccceeEeeccccCcc--c-----cccCcce
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK--YTLAMLGYAEEDQTTVLELTYNYGVT--E-----YTKGNAY  223 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~~~~--~-----~~~~~~~  223 (291)
                      .++||.+.|.|++++.+||+++|||++..+.....+.  .....+.  .  ....+.+.......  .     ...+.++
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~l~~~~~~~~~~~~~~~~~~g~G~   86 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIK--Q--GKIVFVLCSALNPWNKEMGDHLVKHGDGV   86 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEE--E--TTEEEEEEEESSTTCHHHHHHHHHHCSEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEec--C--CcEEEEEEeccCCCCchhhhhhhhCCCeE
Confidence            5899999999999999999999999988765443322  2222333  1  23444443322111  1     1246789


Q ss_pred             eeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCC--CCCceEEEEECCCCceEEEecchhhHH
Q 022835          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIP--GLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       224 ~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~--~~~~~~~~~~DPdG~~ie~~~~~~~~~  286 (291)
                      +|++|.|+|+++++++|    +++|++++.+|....  ++..++++++.|+|..++|+|+++..+
T Consensus        87 ~hiaf~V~di~~~~~~l----~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~g  147 (149)
T d1sqia1          87 KDIAFEVEDCEHIVQKA----RERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTG  147 (149)
T ss_dssp             EEEEEEEECHHHHHHHH----HHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCS
T ss_pred             EEEEEEeccHHHHHHHH----HHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCcC
Confidence            99999999999999999    999999999887532  222357888999999999999876543

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.65  E-value=8.9e-16  Score=112.96  Aligned_cols=114  Identities=22%  Similarity=0.284  Sum_probs=78.2

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe-
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST-  230 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v-  230 (291)
                      .+++|++|.|+|++++.+||+++||+++..+...    ..  .+..++  ....+.+...... ......+..|++|.+ 
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~----~~--~~~~~~--~~~~l~~~~~~~~-~~~~~~~~~h~~~~~~   73 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT----GA--YLTCGD--LWVCLSYDEARQY-VPPQESDYTHYAFTVA   73 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT----EE--EEEETT--EEEEEEECTTCCC-CCGGGSCSCEEEEECC
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc----cc--cccccc--ccceeeccccccc-CCCcCCccceeeeech
Confidence            4689999999999999999999999998765421    12  222212  1223333222211 112234667888887 


Q ss_pred             -cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          231 -DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 -~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                       +|++++.+++    +++|+++...+.    ..++.+||+|||||+|||....
T Consensus        74 ~~d~~~~~~~l----~~~Gv~~~~~~~----~~~~~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          74 EEDFEPLSQRL----EQAGVTIWKQNK----SEGASFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             HHHHHHHHHHH----HHTTCCEEECCC----SSSEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHHHH----HHCCCeEeecCC----CCceEEEEECCCCCEEEEEECC
Confidence             5677777777    999999876543    2368899999999999997754

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.65  E-value=9.7e-16  Score=111.89  Aligned_cols=109  Identities=26%  Similarity=0.287  Sum_probs=73.7

Q ss_pred             CceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe--
Q 022835          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST--  230 (291)
Q Consensus       153 ~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v--  230 (291)
                      +++||.|.|+|++++.+||+++||+++..+...    ......+      +..+.........  ....+..|++|.+  
T Consensus         4 ~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~----~~~~~~~------~~~~~~~~~~~~~--~~~~~~~h~~~~~~~   71 (134)
T d1nkia_           4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ----GAYLELG------SLWLCLSREPQYG--GPAADYTHYAFGIAA   71 (134)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT----EEEEEET------TEEEEEEECTTCC--CCCSSSCEEEEEECH
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc----eeeeecC------CeEEEEeeecccc--ccccccccchhcccc
Confidence            589999999999999999999999998876432    2222222      1222222211111  1222445555554  


Q ss_pred             cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      +|++++.++|    +++|+++...+  +.  .++.+||+|||||+|||+..
T Consensus        72 ~dl~~~~~~l----~~~G~~~~~~~--~~--~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          72 ADFARFAAQL----RAHGVREWKQN--RS--EGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             HHHHHHHHHH----HHTTCCEEECC--CS--SSCEEEEECTTCCEEEEESC
T ss_pred             chHHHHHHHH----HHCCCcCccCC--Cc--ceeEEEEECCCCCEEEEEEC
Confidence            6788888888    99999986543  22  35789999999999999875

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.63  E-value=7.1e-15  Score=109.95  Aligned_cols=120  Identities=21%  Similarity=0.233  Sum_probs=81.3

Q ss_pred             CcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEecc---CCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEE
Q 022835           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDV---PEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i   96 (291)
                      ...+|+||+|.|+|++++.+||+++|||++......   ........++..+.....  +.....      ....+++|+
T Consensus         7 ~~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~a~~~~------~~~~gl~Hi   78 (156)
T d1kw3b2           7 GDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHT--IALAAF------PIPKRIHHF   78 (156)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCS--EEEECC------SCSSSEEEE
T ss_pred             CCCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccce--eeeccC------CCCCceeEE
Confidence            357999999999999999999999999998654321   122233445554332222  222221      122479999


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCC-EEEEEEcC
Q 022835           97 AIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY-IFELIQRG  148 (291)
Q Consensus        97 ~~~v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~-~iel~~~~  148 (291)
                      ||.|++   +.+++++|+++|+.+..+.....+ ...++|++||+|+ .+|+....
T Consensus        79 af~v~~~ddv~~~~d~l~~~G~~~~g~~rH~~~-~~~s~Y~~DP~G~~~~E~~~~~  133 (156)
T d1kw3b2          79 MLQANTIDDVGYAFDRLDAAGRITSLLGRHTND-QTLSFYADTPSPMIEVEFGWGP  133 (156)
T ss_dssp             EEEBSSHHHHHHHHHHHHHTTCBCBCSEEESSS-CCEEEEEECSSTTCEEEEEECC
T ss_pred             EEECCCHHHHHHHHHHHHhcCCceecCcccCCC-CeEEEEEECCCCCeEEEEecCC
Confidence            999975   556789999999876544333333 3345999999998 58987654

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.61  E-value=1.7e-15  Score=114.36  Aligned_cols=125  Identities=17%  Similarity=0.219  Sum_probs=92.1

Q ss_pred             CCCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCc--ceeEEEecccccccceeEeeccccCccc----------cc
Q 022835          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGVTE----------YT  218 (291)
Q Consensus       151 ~~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~----------~~  218 (291)
                      ..+++||.+.|.|++++.+||+++|||++..+......  ....+.++.+    ...+.+........          ..
T Consensus         5 i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~   80 (163)
T d1t47a1           5 VKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVAE   80 (163)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC----CEEEEEeccCCCCCccccccchhhhc
Confidence            35799999999999999999999999998876543222  2233444422    34455544322111          12


Q ss_pred             cCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCC--CCceEEEEECCCCceEEEecchh
Q 022835          219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPG--LNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       219 ~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      .+.|+.|++|.|+|+++++++|    +++|++++.+|.....  +...++++++|+|..++|+++..
T Consensus        81 ~g~G~~hiaf~VdDid~a~~~l----~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~  143 (163)
T d1t47a1          81 HGDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  143 (163)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             CCCceEEEEEeeCCHHHHHHHH----HHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccC
Confidence            4568999999999999999999    9999999998876432  23467899999999999998754

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.58  E-value=4.1e-15  Score=112.75  Aligned_cols=125  Identities=14%  Similarity=0.062  Sum_probs=87.9

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeecc---------------cc----
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTY---------------NY----  212 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~---------------~~----  212 (291)
                      .+++||.|.|+|++++.+||+++|||++..+.....+............  ...+.+..               ..    
T Consensus        11 ~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~   88 (167)
T d1sqda1          11 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG--DLRFLFTAPYSPSLSAGEIKPTTTASIPS   88 (167)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET--TEEEEEEEECCGGGTTTCCGGGCCCSSTT
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCC--CeeEEEecccccccccccccccccccccc
Confidence            4689999999999999999999999998876543322111111111010  11111100               00    


Q ss_pred             Cccc------cccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          213 GVTE------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       213 ~~~~------~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      ....      ...++|+.|+||.|+|+++++++|    +++|++++.+|...++ +.++++++.+++...+|++++.
T Consensus        89 ~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l----~~~G~~~~~~P~~~~~-~~~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          89 FDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             CCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECC
T ss_pred             CCcchHHHhhhccCCCceEEEEEeCCHHHHHHHH----HHCCCEEecCCeecCC-CEEEEEEEccCCcEEEEEecCC
Confidence            0000      113568999999999999999999    9999999999887655 4788999999999999999864

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.56  E-value=6.4e-15  Score=112.14  Aligned_cols=125  Identities=14%  Similarity=0.043  Sum_probs=89.3

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeE--EEecccccccceeEeec-------------cccCcc-
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTL--AMLGYAEEDQTTVLELT-------------YNYGVT-  215 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~l~-------------~~~~~~-  215 (291)
                      .+++|+.|.|.|++++++||+++|||++..+..........  ..++.+    ...+.+.             ...... 
T Consensus        12 ~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (172)
T d1sp8a1          12 LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG----SLSFLFTAPYAHGADAATAALPSFSAA   87 (172)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET----TEEEEEEEECCSSCCGGGCSSTTCCHH
T ss_pred             CEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccC----CeeeEEeeccCCCchhhhcccccCCcc
Confidence            46999999999999999999999999988765433222111  112211    1111111             000000 


Q ss_pred             c-----cccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchhhH
Q 022835          216 E-----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       216 ~-----~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~~~  285 (291)
                      .     ...+.|+.|++|.|+|++++++++    +++|+++..+|....+ +.++++++.|.+.+++|+++++-.
T Consensus        88 ~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l----~~~Ga~~~~~P~~~~~-g~~~a~v~~~g~~~~~lve~~~~~  157 (172)
T d1sp8a1          88 AARRFAADHGLAVRAVALRVADAEDAFRAS----VAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDGA  157 (172)
T ss_dssp             HHHHHHHHHSSEEEEEEEEESCHHHHHHHH----HTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTTG
T ss_pred             hhhhhhhhcCCceEEEEEeeCcHHHHHHHH----HHCcCEeccCCccCCC-CEEEEEEECCCCcEEEEEecCCCC
Confidence            0     124669999999999999999999    9999999999887554 468899999999999999988643

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.56  E-value=9.1e-15  Score=108.18  Aligned_cols=124  Identities=10%  Similarity=0.055  Sum_probs=91.2

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccc--cCCCCceEE
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY--DIGTGFGHF   96 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~i   96 (291)
                      +.+.+|+||+|.|+|++++.+||++ |||+.+.+....    ....++  ++...+++..........+  .+|.|++|+
T Consensus         5 ~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~----~~~l~~--~G~i~ll~~~~~~s~~~~~~~~hg~gv~hi   77 (150)
T d1cjxa1           5 MGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK----NVHLYR--QGEINLILNNEPNSIASYFAAEHGPSVCGM   77 (150)
T ss_dssp             TCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS----SEEEEE--ETTEEEEEECCSSSHHHHHHHHHSSEEEEE
T ss_pred             CccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce----EEEEEe--cCcEEEEecCCCCCHhHhHHhhCCCceEEE
Confidence            5699999999999999999999998 999998765432    233333  3344454433322222222  378899999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCCC
Q 022835           97 AIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus        97 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~  151 (291)
                      ||+|+|+++++++++++|++....+.. ++ ...+..+++|+|.++.|+++....
T Consensus        78 af~V~D~~~a~~~a~~~Ga~~i~~~~~-~g-~~~~~~i~g~gg~~i~Fv~~~~~~  130 (150)
T d1cjxa1          78 AFRVKDSQKAYNRALELGAQPIHIDTG-PM-ELNLPAIKGIGGAPLYLIDRFGEG  130 (150)
T ss_dssp             EEEESCHHHHHHHHHHTTCCBCCCCCC-TT-CBCCCEEECGGGCEEEEECCCSSS
T ss_pred             EEEeCCHHHHHHHHHHCCCEEcccCCC-CC-ceeeeEEEcCCCCEEEEECcCCCC
Confidence            999999999999999999997765432 22 223467899999999999987543

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.54  E-value=7e-14  Score=99.74  Aligned_cols=106  Identities=22%  Similarity=0.282  Sum_probs=74.6

Q ss_pred             EEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCCHHHHH
Q 022835           28 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLV  107 (291)
Q Consensus        28 ~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~di~~~~  107 (291)
                      .|.|+|++++.+||++ |||++.....    .  ..++..+.  ..+.  +.......+   .....++++.++++++++
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~--~~~~~~~~--~~~~--~~~~~~~~~---~~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA----G--WMILQRGD--LMLE--FFAHPGLDP---LASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS----S--EEEEEETT--EEEE--EEECTTCCG---GGCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC----c--eeeeecce--eccc--ccccccccc---CCCCcEEEEEECCHHHHH
Confidence            4999999999999998 9999976533    1  23333222  2222  222211111   123457899999999999


Q ss_pred             HHHHHcCCeeec-------CCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835          108 ENIRAKGGNVTR-------EPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       108 ~~l~~~G~~~~~-------~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +.++++|+.+..       ++...++|.+. ++|+|||||+|||+|..
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~-~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQCKSVGIQETSSGYPRIHAPELQGWGGTM-AALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHHTTCCBCSSSSSEEEEEEECTTSSEE-EEEECTTSCEEEEEECC
T ss_pred             HHHhhhhhhhccccccccccceecCCCcEE-EEEECCCCCEEEEEEcc
Confidence            999999988643       45677787765 89999999999999864

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.52  E-value=3.3e-14  Score=103.69  Aligned_cols=118  Identities=17%  Similarity=0.133  Sum_probs=79.0

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEEeccCCC-------ceEEEEEecCCCCcceEEEeee-cCCCccccCCCCceEEE
Q 022835           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-------KYSNAFLGFGPEQSHFVVELTY-NYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        26 hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-------~~~~~~l~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~i~   97 (291)
                      ++.|.|+|+++|++||+++||++++.+...++.       ......+.+++  ..+.+.... ..............+++
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAG--SSFVVCDVSSLPGFSTAKSEGSGVTFL   87 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETT--EEEEEEEGGGSTTCCCCCTTSCCCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECC--eeeeccccccccccccCCCCCcceEEE
Confidence            456677899999999999999998765433221       22233444432  112221111 11111122222346899


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835           98 IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      +.|+|+++++.++.++|+++..++...++|.+. .+++||+|+.|+|.|
T Consensus        88 ~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~-~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          88 LGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEECCCCHHHHHTTEE-EEEECTTSCEEEEEC
T ss_pred             EeecCcceeEEEeecccceEecCcccccccCEE-EEEECCCCCEEEEeC
Confidence            999999999999999999999999999998775 899999999999975

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.52  E-value=1.1e-13  Score=98.77  Aligned_cols=105  Identities=22%  Similarity=0.313  Sum_probs=72.1

Q ss_pred             eeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHHHH
Q 022835          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~~~  237 (291)
                      .|.|+|++++.+||++ |||++.....    ++......      ...+.+......   .......++.+.|+|++++.
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~~~~~~~------~~~~~~~~~~~~---~~~~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA----GWMILQRG------DLMLEFFAHPGL---DPLASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS----SEEEEEET------TEEEEEEECTTC---CGGGCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC----ceeeeecc------eecccccccccc---ccCCCCcEEEEEECCHHHHH
Confidence            4999999999999987 9999876432    12222211      122222221111   11234578999999999999


Q ss_pred             HHHHHHHHHhCCeecc-------CCccCCCCCceEEEEECCCCceEEEecc
Q 022835          238 EVVNLVTQELGGKITR-------QPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~~-------~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      +.+    +++|+.+..       +|...++ +.+.+||+|||||+|||+|.
T Consensus        73 ~~~----~~~~~~~~~~~~~~~~~~~~~~~-G~r~~~~~DPDGn~iei~q~  118 (120)
T d1ecsa_          73 RQC----KSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQN  118 (120)
T ss_dssp             HHH----HHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEEC
T ss_pred             HHH----hhhhhhhccccccccccceecCC-CcEEEEEECCCCCEEEEEEc
Confidence            999    888887654       3444555 46889999999999999985

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.48  E-value=1.9e-13  Score=97.58  Aligned_cols=106  Identities=11%  Similarity=0.014  Sum_probs=72.9

Q ss_pred             eeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHHHH
Q 022835          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~~~  237 (291)
                      .|.|+|++++.+||+++|||++.....    .+..  +..+    +..+.+......    ......++.|.+.|++.+.
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~----~~~~--~~~~----~~~l~l~~~~~~----~~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR----DFAG--VRRG----DIRLHISRTEHQ----IVADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS----SEEE--EEET----TEEEEEEECSCH----HHHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC----ceeE--eeee----eeeeeeeccccc----cccceeEEEEeechhHHHH
Confidence            489999999999999999999775432    1322  3321    233433332211    1235578999999999999


Q ss_pred             HHHHHHHHHhCCeeccCCccC------CCCCceEEEEECCCCceEEEecc
Q 022835          238 EVVNLVTQELGGKITRQPGPI------PGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~~~p~~~------~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      +++    ++++......+...      ...+++.+||+|||||+|||.+.
T Consensus        76 ~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEW----ARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHH----HTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHH----HhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            999    88887765544321      11236889999999999999764

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.47  E-value=1.4e-13  Score=100.34  Aligned_cols=116  Identities=13%  Similarity=0.124  Sum_probs=75.7

Q ss_pred             eEeeeeCCchhcHHHHHHhhCCeeeeeecCCCc-------ceeEEEecccccccceeEeeccc---cCccccccCcceee
Q 022835          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-------KYTLAMLGYAEEDQTTVLELTYN---YGVTEYTKGNAYAQ  225 (291)
Q Consensus       156 hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~l~~~---~~~~~~~~~~~~~h  225 (291)
                      ++.+.++|.++|.+||+++||+++..+...+++       ......+..++    ..+.+...   .............+
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~   85 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAG----SSFVVCDVSSLPGFSTAKSEGSGVT   85 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETT----EEEEEEEGGGSTTCCCCCTTSCCCE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECC----eeeeccccccccccccCCCCCcceE
Confidence            355677799999999999999998766432221       11112222211    11222111   11111112223469


Q ss_pred             EEEEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       226 ~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      +++.|+|++++..++    .++|++++.+|...++ +.++++|+||+|+.|+|.|
T Consensus        86 l~~~v~d~~~~~~~~----~~~g~~~~~~~~~~~~-g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          86 FLLGTKDAEAAVAKA----VDAGAVKVEVTEAEVE-LGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EEEECSCHHHHHHHH----HHTTCEECCCCHHHHH-TTEEEEEECTTSCEEEEEC
T ss_pred             EEEeecCcceeEEEe----ecccceEecCcccccc-cCEEEEEECCCCCEEEEeC
Confidence            999999999999999    9999999999998877 4689999999999999975

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.47  E-value=5.7e-13  Score=95.05  Aligned_cols=105  Identities=13%  Similarity=0.055  Sum_probs=71.4

Q ss_pred             EEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCCHHHHH
Q 022835           28 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLV  107 (291)
Q Consensus        28 ~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~di~~~~  107 (291)
                      .|.|+|++++.+||+++|||++.....    .  .+++..++  ..  +.+.......    .....++.+.+.++++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~----~--~~~~~~~~--~~--l~l~~~~~~~----~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR----D--FAGVRRGD--IR--LHISRTEHQI----VADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS----S--EEEEEETT--EE--EEEEECSCHH----HHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC----c--eeEeeeee--ee--eeeecccccc----ccceeEEEEeechhHHHH
Confidence            489999999999999999999876533    1  24444432  22  3333222111    113457889999999999


Q ss_pred             HHHHHcCCeeecCCc-------cCCCCceEEEEEECCCCCEEEEEEc
Q 022835          108 ENIRAKGGNVTREPG-------PLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       108 ~~l~~~G~~~~~~~~-------~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      +++++++......+.       ...++.+ .+||+|||||+|||...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPAGR-EFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETTEE-EEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCCeE-EEEEECCCCCEEEEEeC
Confidence            999999877543221       1123344 48999999999999864

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.46  E-value=3e-13  Score=96.18  Aligned_cols=110  Identities=14%  Similarity=0.116  Sum_probs=71.0

Q ss_pred             eEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecchHH
Q 022835          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~~~  235 (291)
                      +..|.|+|++++.+||+++|||++..+...    +.....+      ...+.+.....    ....+..++.+.+++++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~~----~~~~~~~------~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVEDD----FAGVVRD------DVTLFISAVQD----QVVPDNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECSS----EEEEEET------TEEEEEEECSC----TTTGGGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECCC----eeEEecc------cceeecccccc----ccCCCCceEEEeeccHHH
Confidence            455899999999999999999998776431    2222222      22233322211    123356788899999888


Q ss_pred             HHHHHHHH----HHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          236 SAEVVNLV----TQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       236 ~~~~l~~~----~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      ..+.+...    +...|+....+|..+++  ++.+||+|||||+|||+.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~DPdGn~ief~~e  120 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFVAE  120 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEEETT--EEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHhhhHHhhhcccccccCceecCC--EEEEEEECCCCCEEEEEEC
Confidence            87777211    12333334444555554  5889999999999999863

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.35  E-value=2.8e-12  Score=94.57  Aligned_cols=117  Identities=14%  Similarity=0.095  Sum_probs=85.2

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCCcceeEEEecccccccceeEeeccccCccc----cccCcceeeEE
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE----YTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~h~~  227 (291)
                      .+++||.+.|+|++++.+||++ |||+...+.....    ..+++.+    ...+.+....+...    ...+++++|++
T Consensus         8 ~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~~----~~l~~~G----~i~ll~~~~~~s~~~~~~~~hg~gv~hia   78 (150)
T d1cjxa1           8 MGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSKN----VHLYRQG----EINLILNNEPNSIASYFAAEHGPSVCGMA   78 (150)
T ss_dssp             EEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSSS----EEEEEET----TEEEEEECCSSSHHHHHHHHHSSEEEEEE
T ss_pred             CCEEEEEEecCCHHHHHHHHHH-hCCEEEecccceE----EEEEecC----cEEEEecCCCCCHhHhHHhhCCCceEEEE
Confidence            4689999999999999999976 9999887643222    2222211    23333332222111    23678999999


Q ss_pred             EEecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecchh
Q 022835          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       228 f~v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~~  283 (291)
                      |.|+|++++++++    +++|++++..|....  ......++.|+|.++.|+++++
T Consensus        79 f~V~D~~~a~~~a----~~~Ga~~i~~~~~~g--~~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          79 FRVKDSQKAYNRA----LELGAQPIHIDTGPM--ELNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             EEESCHHHHHHHH----HHTTCCBCCCCCCTT--CBCCCEEECGGGCEEEEECCCS
T ss_pred             EEeCCHHHHHHHH----HHCCCEEcccCCCCC--ceeeeEEEcCCCCEEEEECcCC
Confidence            9999999999999    999999887765432  2456789999999999999765

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.32  E-value=5.7e-12  Score=97.43  Aligned_cols=102  Identities=18%  Similarity=0.187  Sum_probs=71.3

Q ss_pred             CcceeEEEEEEeC--CHHHHHHHHHhccCCEEEEEeccCCCceEE--EEEecCCCCcceEEEeeecCCCc---cc---cC
Q 022835           20 DKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPEEKYSN--AFLGFGPEQSHFVVELTYNYGVT---SY---DI   89 (291)
Q Consensus        20 ~~~~i~hv~i~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~l~~~~~~~~~---~~---~~   89 (291)
                      .+.+|+||++.|+  |+++++.||+++|||+.....+.++....+  ..+...+....+.+.........   .+   ..
T Consensus         2 Gl~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~   81 (203)
T d1cjxa2           2 GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFN   81 (203)
T ss_dssp             SEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHT
T ss_pred             CCCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcC
Confidence            4789999999998  999999999999999998876654443222  22332222222222222211111   11   26


Q ss_pred             CCCceEEEEEeCCHHHHHHHHHHcCCeeecCC
Q 022835           90 GTGFGHFAIATEDVYKLVENIRAKGGNVTREP  121 (291)
Q Consensus        90 ~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~  121 (291)
                      |.|++||||.|+||.++.++|+++|++++..|
T Consensus        82 g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          82 GEGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             SSBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            78999999999999999999999999987643

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.30  E-value=1.1e-11  Score=87.74  Aligned_cols=105  Identities=12%  Similarity=0.072  Sum_probs=70.2

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEEeccCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEEeCCHHH
Q 022835           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYK  105 (291)
Q Consensus        26 hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~v~di~~  105 (291)
                      +-.|.|+|++++++||+++|||++..+...      ..++..++  ..+.+..  ....    ...+..++.+.+.+++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~~------~~~~~~~~--~~l~~~~--~~~~----~~~~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVEDD------FAGVVRDD--VTLFISA--VQDQ----VVPDNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECSS------EEEEEETT--EEEEEEE--CSCT----TTGGGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECCC------eeEEeccc--ceeeccc--cccc----cCCCCceEEEeeccHHH
Confidence            344899999999999999999999766331      23444332  2232222  2111    11244567888999999


Q ss_pred             HHHHHHHcCCee--------ecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835          106 LVENIRAKGGNV--------TREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       106 ~~~~l~~~G~~~--------~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      .++.+.+.+...        ..++...++| + .+||+|||||+|||+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~-~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVEQPWG-R-EFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEEETTE-E-EEEEECTTCCEEEEEE
T ss_pred             HHHHHHHhhhHHhhhcccccccCceecCCE-E-EEEEECCCCCEEEEEE
Confidence            888877665542        3345555554 3 4899999999999985

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.6e-11  Score=94.92  Aligned_cols=107  Identities=17%  Similarity=0.243  Sum_probs=73.1

Q ss_pred             CCCCCcceeEEEEEEeCC--HHHHHHHHHhccCCEEEEEec-----cCCCceEEEEEecCCCCcceEEEeeecCC-Cc--
Q 022835           16 WPKKDKRRFLHAVYRVGD--LDRTIKFYTECFGMKLLRKRD-----VPEEKYSNAFLGFGPEQSHFVVELTYNYG-VT--   85 (291)
Q Consensus        16 ~~~~~~~~i~hv~i~v~d--~~~~~~FY~~~lG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-~~--   85 (291)
                      .+...+.+|+||++.|++  +++++.||+++|||+......     .+........+...++...+.+....+.. ..  
T Consensus        17 ~p~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi   96 (210)
T d1sqia2          17 LPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQI   96 (210)
T ss_dssp             SCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHH
T ss_pred             CCCCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHH
Confidence            345679999999999998  999999999999998765422     11122333444433344444443322211 11  


Q ss_pred             -cc---cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCc
Q 022835           86 -SY---DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPG  122 (291)
Q Consensus        86 -~~---~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~  122 (291)
                       .+   ..|.|++||||.|+||.++.++|+++|++++.+|.
T Consensus        97 ~~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~  137 (210)
T d1sqia2          97 QEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPS  137 (210)
T ss_dssp             HHHHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCH
T ss_pred             HHHHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCc
Confidence             11   36889999999999999999999999999887763

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.24  E-value=1.1e-11  Score=95.87  Aligned_cols=98  Identities=19%  Similarity=0.214  Sum_probs=68.6

Q ss_pred             CceeEeeeeC--CchhcHHHHHHhhCCeeeeeecCCCcc--eeEEEecccccccceeEeeccccC-ccc-------cccC
Q 022835          153 PLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPEYK--YTLAMLGYAEEDQTTVLELTYNYG-VTE-------YTKG  220 (291)
Q Consensus       153 ~~~hv~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~~-~~~-------~~~~  220 (291)
                      +++||++.|+  +++++..||+++|||++....+..+..  .......  .+.....+.+..... ..+       ...+
T Consensus         5 ~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~--~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g   82 (203)
T d1cjxa2           5 VIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMS--APDGMIRIPLNEESSKGAGQIEEFLMQFNG   82 (203)
T ss_dssp             EEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEE--CTTSSCEEEEEEECTTCCSHHHHHHHHHTS
T ss_pred             eeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEee--ccccccceecccCCCCCccHHHHHHHhcCC
Confidence            6899999998  899999999999999988765433222  1222222  222233333332211 111       2356


Q ss_pred             cceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCc
Q 022835          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       221 ~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      +|++|+||.|+|+.++++.|    +++|++++..|.
T Consensus        83 ~GiqHIAf~vdDI~aav~~L----~~~Gv~fL~~pp  114 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDAL----KKIGMRFMTAPP  114 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHH----HHTTCCBCCCCC
T ss_pred             CCCceEEEEeCCHHHHHHHH----HhcCCccccCch
Confidence            79999999999999999999    999999998764

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.20  E-value=1.2e-10  Score=91.05  Aligned_cols=98  Identities=19%  Similarity=0.301  Sum_probs=66.7

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEecc-----CCCceEEEEEecCCCCcceEE-EeeecCCC-c---cc-
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDV-----PEEKYSNAFLGFGPEQSHFVV-ELTYNYGV-T---SY-   87 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~l-~~~~~~~~-~---~~-   87 (291)
                      ..+.+|+||++.|+|+++++.||+++|||+...+...     +........+..+++...+.+ +...+... .   .+ 
T Consensus         5 ~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~FL   84 (224)
T d1sp8a2           5 YGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFL   84 (224)
T ss_dssp             CSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHHH
T ss_pred             CCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHHH
Confidence            4689999999999999999999999999998765432     222334444443333333322 22112111 1   11 


Q ss_pred             --cCCCCceEEEEEeCCHHHHHHHHHHcCCe
Q 022835           88 --DIGTGFGHFAIATEDVYKLVENIRAKGGN  116 (291)
Q Consensus        88 --~~~~~~~~i~~~v~di~~~~~~l~~~G~~  116 (291)
                        ..+.|++||||.|+||.++.+.|+++|+.
T Consensus        85 ~~~~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          85 DHHGGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             HHHTSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             HhccCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence              25679999999999999999999988744

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.17  E-value=1.1e-10  Score=89.42  Aligned_cols=104  Identities=19%  Similarity=0.275  Sum_probs=72.4

Q ss_pred             CcceeEEEEEEeC--CHHHHHHHHHhccCCEEEEEec-----cCCCceEEEEEecCCCCcceEEEeeecCC-Cc---cc-
Q 022835           20 DKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRD-----VPEEKYSNAFLGFGPEQSHFVVELTYNYG-VT---SY-   87 (291)
Q Consensus        20 ~~~~i~hv~i~v~--d~~~~~~FY~~~lG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~l~~~~~~~-~~---~~-   87 (291)
                      ...+|+||++.|+  ++++++.||+++|||+......     .+........+..++....+.+....... ..   .+ 
T Consensus         3 ~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           3 TFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             SCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             cceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhh
Confidence            5789999999999  9999999999999998865432     12233333333333333333333222211 11   11 


Q ss_pred             --cCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCcc
Q 022835           88 --DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGP  123 (291)
Q Consensus        88 --~~~~~~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~  123 (291)
                        ..|.|++||||.|+||.++.++|+++|++++..|..
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p~~  120 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDS  120 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGG
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCChH
Confidence              367899999999999999999999999998877643

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.10  E-value=2.8e-09  Score=77.11  Aligned_cols=113  Identities=17%  Similarity=0.137  Sum_probs=73.9

Q ss_pred             EeC-CHHHHHHHHHhccCCEEEEEeccCCC------------ceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEE
Q 022835           30 RVG-DLDRTIKFYTECFGMKLLRKRDVPEE------------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        30 ~v~-d~~~~~~FY~~~lG~~~~~~~~~~~~------------~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i   96 (291)
                      ..+ |.++|++||+++||+++......++.            ....+.+.+++  .  .+.........+. ...+..++
T Consensus         9 ~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g--~--~~~~~d~~~~~~~-~~~~~~~~   83 (137)
T d1u6la_           9 IFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGS--F--ALMASDNHPAYPY-EGIKGCSI   83 (137)
T ss_dssp             EESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETT--E--EEEEEECCTTSCC-CCCCSEEE
T ss_pred             EECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcC--e--EEEecccCCcccc-cCCCcEEE
Confidence            334 99999999999999999876543322            11122233321  1  1111111111111 22244678


Q ss_pred             EEEeCCHH--HHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcC
Q 022835           97 AIATEDVY--KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~di~--~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ++.+++.+  +.+.++.++|.++..++...+||.+. .+|+||+|+.|.|....
T Consensus        84 ~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~-g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          84 SLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASF-GMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             EEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEE-EEEECTTSCEEEEEESC
T ss_pred             EEEcCCHHHHHHHHhhcccCceeecCccccCCCcEE-EEEECCCCCEEEEEecC
Confidence            88887655  55777888999999999999998764 88999999999987653

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.09  E-value=2.2e-10  Score=89.59  Aligned_cols=103  Identities=13%  Similarity=0.179  Sum_probs=68.1

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCC-----cceeEEEecccccccceeEeeccc---cCccc-------
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-----YKYTLAMLGYAEEDQTTVLELTYN---YGVTE-------  216 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~l~~~---~~~~~-------  216 (291)
                      .+++||++.|+|++++.+||+++|||+........+     .......+..+.  ....+.+...   ....+       
T Consensus         8 ~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~--g~v~~~l~E~~~~~~~~s~i~~FL~   85 (224)
T d1sp8a2           8 SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS--ENVLLPLNEPVHGTKRRSQIQTFLD   85 (224)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS--SCCEEEEEEECCCSSSCCHHHHHHH
T ss_pred             CeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCC--CccceeeeeecCCCCCccHHHHHHH
Confidence            468999999999999999999999999876543221     222222333222  2333444322   11111       


Q ss_pred             cccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCc
Q 022835          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       217 ~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      ...+.|++|+||.|+|+.+++++|+++..++|++++..|.
T Consensus        86 ~~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p~  125 (224)
T d1sp8a2          86 HHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPPT  125 (224)
T ss_dssp             HHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCCC
T ss_pred             hccCCCceeEEEEeCCHHHHHHHHHhccccccceecccch
Confidence            1245799999999999999999995444456777777664

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=4.5e-10  Score=86.67  Aligned_cols=98  Identities=15%  Similarity=0.234  Sum_probs=67.4

Q ss_pred             CceeEeeeeCC--chhcHHHHHHhhCCeeeeeecCC-----CcceeEEEecccccccceeEeeccccCc--cc-------
Q 022835          153 PLCQVMLRVGD--LGRSIKFYEKALGMKLLRTVDKP-----EYKYTLAMLGYAEEDQTTVLELTYNYGV--TE-------  216 (291)
Q Consensus       153 ~~~hv~l~v~d--~~~~~~fy~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~-------  216 (291)
                      .++|+++.|++  ++++.+||+++|||+........     ........+..+.  ....+.+..+...  .+       
T Consensus        24 ~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~--~~i~~~lne~~~~~~~sqi~~fl~  101 (210)
T d1sqia2          24 IIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE--ESIKMPINEPAPGRKKSQIQEYVD  101 (210)
T ss_dssp             EEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTT--SCCEEEEEECC-----CHHHHHHH
T ss_pred             eeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecC--ccccccccccCCCCcccHHHHHHh
Confidence            59999999998  99999999999999976543311     1112222233222  3444544432211  11       


Q ss_pred             cccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCc
Q 022835          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       217 ~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      ...|+|++||||.|+|+.+++++|    +++|++++..|.
T Consensus       102 ~~~G~GiQHIAf~t~DI~~av~~L----~~~Gv~fL~~P~  137 (210)
T d1sqia2         102 YNGGAGVQHIALRTEDIITTIRHL----RERGMEFLAVPS  137 (210)
T ss_dssp             HHTSSEEEEEEEEESCHHHHHHHH----HHHTCCBCCCCH
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHH----HHcCCCCCCCCc
Confidence            235789999999999999999999    999999998885

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.04  E-value=4.8e-10  Score=85.77  Aligned_cols=99  Identities=11%  Similarity=0.231  Sum_probs=68.5

Q ss_pred             CCceeEeeeeC--CchhcHHHHHHhhCCeeeeeecCC-----CcceeEEEecccccccceeEeecccc--Cccc------
Q 022835          152 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKP-----EYKYTLAMLGYAEEDQTTVLELTYNY--GVTE------  216 (291)
Q Consensus       152 ~~~~hv~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~l~~~~--~~~~------  216 (291)
                      ..++|+++.|+  +++++..||+++|||++.......     ........+.  .......+.+..+.  ...+      
T Consensus         5 ~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~--s~~~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           5 QAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVA--DGTLKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             CEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEE--CTTSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             eeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeecc--ccccccceeecccCccccccchhhhh
Confidence            35899999999  999999999999999977653211     1112222222  22223344443211  1111      


Q ss_pred             -cccCcceeeEEEEecchHHHHHHHHHHHHHhCCeeccCCc
Q 022835          217 -YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       217 -~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                       ...++|++|+||.|+|+.+++++|    +++|++++..|.
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L----~~~G~~fL~~p~  119 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTM----RAAGVQFLDTPD  119 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCG
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHH----HHcCCCCCCCCh
Confidence             235679999999999999999999    999999999884

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.02  E-value=9.4e-10  Score=79.65  Aligned_cols=113  Identities=18%  Similarity=0.117  Sum_probs=70.2

Q ss_pred             CCchhcHHHHHHhhCCeeeeeecCCCccee------------EEEecccccccceeEeeccccCccccccCcceeeEEEE
Q 022835          162 GDLGRSIKFYEKALGMKLLRTVDKPEYKYT------------LAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       162 ~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~  229 (291)
                      .|.++|.+||+++||+++.......+....            .+.+...    +..+.+...... ......+..++++.
T Consensus        12 g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~~~~~d~~~~-~~~~~~~~~~~~l~   86 (137)
T d1u6la_          12 GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPA-YPYEGIKGCSISLN   86 (137)
T ss_dssp             SCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTT-SCCCCCCSEEEEEE
T ss_pred             CCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEc----CeEEEecccCCc-ccccCCCcEEEEEE
Confidence            499999999999999998765433222110            0111111    111111111111 11122345778888


Q ss_pred             ecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecch
Q 022835          230 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       230 v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~~  282 (291)
                      +++ .+..+++... .++|++++.+|...++ +.++++|+||+|+.|+|...+
T Consensus        87 ~~~-~d~~~~~~~~-l~~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          87 VDS-KAEAERLFNA-LAEGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             CSS-HHHHHHHHHH-HHTTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEESC
T ss_pred             cCC-HHHHHHHHhh-cccCceeecCccccCC-CcEEEEEECCCCCEEEEEecC
Confidence            887 3334444333 6789999999999888 468899999999999997654

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.96  E-value=3.6e-09  Score=82.71  Aligned_cols=98  Identities=18%  Similarity=0.305  Sum_probs=64.8

Q ss_pred             CCcceeEEEEEEeCCHHHHHHHHHhccCCEEEEEeccCC-----CceEEEEEecCCCCcceEEEee-ec-CCCc---c--
Q 022835           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----EKYSNAFLGFGPEQSHFVVELT-YN-YGVT---S--   86 (291)
Q Consensus        19 ~~~~~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~l~~~-~~-~~~~---~--   86 (291)
                      ..+.+|+||++.|+|++++.+||+++||+.........+     .......+...++...+.+... .+ ....   .  
T Consensus        18 ~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~FL   97 (230)
T d1sqda2          18 YGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYL   97 (230)
T ss_dssp             SSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHH
T ss_pred             CCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHHHH
Confidence            458999999999999999999999999998877644222     1222233332322232222211 11 1111   1  


Q ss_pred             -ccCCCCceEEEEEeCCHHHHHHHHHHcCCe
Q 022835           87 -YDIGTGFGHFAIATEDVYKLVENIRAKGGN  116 (291)
Q Consensus        87 -~~~~~~~~~i~~~v~di~~~~~~l~~~G~~  116 (291)
                       ...|.|++||||.|+||.++.++|+++|..
T Consensus        98 ~~~~G~GiQHIAf~tdDI~aav~~LrarG~~  128 (230)
T d1sqda2          98 EHNEGAGLQHLALMSEDIFRTLREMRKRSSI  128 (230)
T ss_dssp             HHHTSCEEEEEEEEESCHHHHHHHHHHHGGG
T ss_pred             hhccCCceeEEEEEeCCHHHHHHHHHHhhcc
Confidence             236889999999999999999999997643

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.85  E-value=6e-09  Score=81.43  Aligned_cols=100  Identities=13%  Similarity=0.208  Sum_probs=65.3

Q ss_pred             CCceeEeeeeCCchhcHHHHHHhhCCeeeeeecCCC-----cceeEEEecccccccceeEeecccc---Cccc-------
Q 022835          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-----YKYTLAMLGYAEEDQTTVLELTYNY---GVTE-------  216 (291)
Q Consensus       152 ~~~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~l~~~~---~~~~-------  216 (291)
                      .+++||++.|+|++++.+||+.+||+.........+     .......+..  ++....+.+....   +..+       
T Consensus        21 ~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s--~~g~v~~~l~E~~~~~~~~sqi~~FL~   98 (230)
T d1sqda2          21 RRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLAS--NDEMVLLPINEPVHGTKRKSQIQTYLE   98 (230)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEEC--TTSCSEEEEEEECCC---CCHHHHHHH
T ss_pred             CccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccC--CCcccceeEEeecCCCCCcchHHHHHh
Confidence            469999999999999999999999999877654222     1112222221  2233444444321   1111       


Q ss_pred             cccCcceeeEEEEecchHHHHHHHHHHHHHhCCeecc
Q 022835          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR  253 (291)
Q Consensus       217 ~~~~~~~~h~~f~v~d~~~~~~~l~~~~~~~G~~~~~  253 (291)
                      ...|+|++||||.|+|+.+++++|+++-..+|++++.
T Consensus        99 ~~~G~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~~  135 (230)
T d1sqda2          99 HNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMP  135 (230)
T ss_dssp             HHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCC
T ss_pred             hccCCceeEEEEEeCCHHHHHHHHHHhhcccCccccc
Confidence            2357899999999999999999995443345777663

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.84  E-value=1.5e-07  Score=67.34  Aligned_cols=115  Identities=15%  Similarity=0.179  Sum_probs=73.6

Q ss_pred             EEEEEeCCHHHHHHHHHhccCCEEEEEec-------cCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRD-------VPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        26 hv~i~v~d~~~~~~FY~~~lG~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      ++.+.-+|.++|++||+++||.+.+.+..       .+.+....+-+.+++  ..+.  +...........+ +...+++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~--~~i~--~~d~~~~~~~~~~-~~~s~~l   83 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGD--QSVH--CIDSHVRHAFDFT-PAFSFFV   83 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETT--EEEE--EEEESSCCSCCCC-TTEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECC--EEEE--EecCCCCCCCCCC-CceEEEE
Confidence            44555568999999999999987654421       122334445565542  2222  2222111112222 3356778


Q ss_pred             EeCCHHHH--HHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEE
Q 022835           99 ATEDVYKL--VENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        99 ~v~di~~~--~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      .+++.++.  +.+..++|.+++.++.+.++|.+. ..++||.|+.|.|.-
T Consensus        84 ~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~~-g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          84 DCESNAQIERLAEALSDGGKALMPLGDYGFSQRF-AWLADRFGVSWQLNL  132 (134)
T ss_dssp             ECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSEE-EEEECTTSCEEEEEE
T ss_pred             EeccHHHHHHHHHHHhcCCEEecCcccccccceE-EEEECCCCCEEEEEc
Confidence            87765433  555667899999999999998875 789999999998864

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.63  E-value=2.9e-07  Score=65.82  Aligned_cols=116  Identities=12%  Similarity=0.056  Sum_probs=68.7

Q ss_pred             EeeeeCCchhcHHHHHHhhCCeeeeeec-------CCCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEE
Q 022835          157 VMLRVGDLGRSIKFYEKALGMKLLRTVD-------KPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       157 v~l~v~d~~~~~~fy~~~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~  229 (291)
                      +.+.-++.+++.+||+++||.....+..       ..++...-+.+..+    +..+-+........... .....+++.
T Consensus        10 L~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~----~~~i~~~d~~~~~~~~~-~~~~s~~l~   84 (134)
T d1u7ia_          10 LMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG----DQSVHCIDSHVRHAFDF-TPAFSFFVD   84 (134)
T ss_dssp             EEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEEESSCCSCCC-CTTEEEEEE
T ss_pred             EEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEEC----CEEEEEecCCCCCCCCC-CCceEEEEE
Confidence            3444458899999999999987654421       11121111222221    12222221111111122 234567888


Q ss_pred             ecchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEec
Q 022835          230 TDDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       230 v~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~  280 (291)
                      +++ .+..+++... .+.|++++.++...++ +.++.+++||.|+.|.|.-
T Consensus        85 ~~~-~d~~~~~~~~-l~~gg~v~~p~~~~~~-g~~~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          85 CES-NAQIERLAEA-LSDGGKALMPLGDYGF-SQRFAWLADRFGVSWQLNL  132 (134)
T ss_dssp             CCC-HHHHHHHHHH-HHTTSEEEEEEECCSS-SSEEEEEECTTSCEEEEEE
T ss_pred             ecc-HHHHHHHHHH-HhcCCEEecCcccccc-cceEEEEECCCCCEEEEEc
Confidence            887 4444455444 4778999999888877 4689999999999999853

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.33  E-value=1.6e-05  Score=55.96  Aligned_cols=110  Identities=12%  Similarity=0.113  Sum_probs=67.7

Q ss_pred             EEEEeC-CHHHHHHHHHhccCCEEEEEec-------cCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEE
Q 022835           27 AVYRVG-DLDRTIKFYTECFGMKLLRKRD-------VPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        27 v~i~v~-d~~~~~~FY~~~lG~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~   98 (291)
                      --|..+ |.++|.+||+++||-+.+.+..       .+.+....+-+.+++  ..  +.+.......  .   .-.++++
T Consensus         8 Pyl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g--~~--~~~~d~~~~~--~---~~~s~~v   78 (129)
T d1tsja_           8 TFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG--QV--FMAIDANSGT--E---LPISLFV   78 (129)
T ss_dssp             EEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT--EE--EEEEC------------CCCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECC--EE--EEeecCCCCC--C---CCEEEEe
Confidence            455565 9999999999999765443321       123344445566542  22  2222211111  1   1134677


Q ss_pred             EeCCHHHH---HHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEc
Q 022835           99 ATEDVYKL---VENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~di~~~---~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      .+++.+++   +++| ++|.++..++...++|.+. ..++||.|+.|.|..+
T Consensus        79 ~~~~~~e~~~~~~~L-~~gg~v~~p~~~~~~g~~~-g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          79 TVKDTIEMERLFNGL-KDEGAILMPKTNMPPYREF-AWVQDKFGVSFQLALP  128 (129)
T ss_dssp             ECSSHHHHHHHHHHH-HTTCEEEEEEEEETTEEEE-EEEECTTSCEEEEEEC
T ss_pred             ccCCHHHHHHHHHHh-ccCCEEecccccccccceE-EEEECCCCCEEEEeCC
Confidence            78776654   4444 5677988888888987764 7899999999998764

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.24  E-value=6.6e-06  Score=58.03  Aligned_cols=111  Identities=12%  Similarity=0.014  Sum_probs=65.4

Q ss_pred             eee-CCchhcHHHHHHhhCCeeeeeec-C------CCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEe
Q 022835          159 LRV-GDLGRSIKFYEKALGMKLLRTVD-K------PEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       159 l~v-~d~~~~~~fy~~~lG~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v  230 (291)
                      |.. .|.+++.+||+++||-..+.+.. .      .++..--+.+..+    +..+-+....+    ..+ ....+.+.+
T Consensus        10 l~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~----g~~~~~~d~~~----~~~-~~~s~~v~~   80 (129)
T d1tsja_          10 LMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN----GQVFMAIDANS----GTE-LPISLFVTV   80 (129)
T ss_dssp             EECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET----TEEEEEEC------------CCCEEEEC
T ss_pred             EEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEeecCCC----CCC-CCEEEEecc
Confidence            444 48999999999999765443321 1      1121111222221    12222211111    011 124577888


Q ss_pred             cchHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          231 DDVYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~d~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                      ++ .+..+++..+| +.|++++.++...++ +.++..++||.|+.|.|..+
T Consensus        81 ~~-~~e~~~~~~~L-~~gg~v~~p~~~~~~-g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          81 KD-TIEMERLFNGL-KDEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             SS-HHHHHHHHHHH-HTTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEEC
T ss_pred             CC-HHHHHHHHHHh-ccCCEEecccccccc-cceEEEEECCCCCEEEEeCC
Confidence            88 44555554554 567799988888887 46889999999999999765

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.48  E-value=0.02  Score=40.78  Aligned_cols=102  Identities=11%  Similarity=-0.013  Sum_probs=56.9

Q ss_pred             eCCchhcHHHHHHhhCCeeeeeec-C-------CCcceeEEEecccccccceeEeeccccCccccccCcceeeEEEEecc
Q 022835          161 VGDLGRSIKFYEKALGMKLLRTVD-K-------PEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       161 v~d~~~~~~fy~~~lG~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d  232 (291)
                      -.|.++|.+||.++||-....... .       ..+..--+.+..+    +..+-...  ..+..+.+ ...++++.++|
T Consensus        10 ~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~----g~~lm~sD--~~~~~~~~-~~~sl~l~~d~   82 (156)
T d1u69a_          10 DSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM----GIPCLGLN--GGPAFRHS-EAFSFQVATDD   82 (156)
T ss_dssp             SSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET----TEEEEEEE--CCTTCCCC-TTEEEEEEESS
T ss_pred             CCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEEC----CeEEEeec--CCCCCCCC-CCeEEEEecCC
Confidence            378899999999999643332221 1       0111111222221    12221111  11122223 34678999999


Q ss_pred             hHHHHHHHHHHHHHhCCeeccCCccCCCCCceEEEEECCCCceEEEecc
Q 022835          233 VYKSAEVVNLVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 ~~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~ie~~~~  281 (291)
                       .+.+++++..|.+.| ++..     ++     .+++|+.|+.|.|+.+
T Consensus        83 -~eE~d~~f~~LsegG-~~~~-----~~-----G~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          83 -QAETDRLWNAIVDNG-GEES-----AC-----GWCRDKWGISWQITPR  119 (156)
T ss_dssp             -HHHHHHHHHHHHHTT-CEEC-----ST-----TEEECTTSCEEEEEEH
T ss_pred             -HHHHHHHHHHHhccC-CCCC-----CC-----eEEECCCCCEEEeChH
Confidence             666777777766554 3322     22     3699999999999865

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.18  E-value=0.12  Score=36.59  Aligned_cols=129  Identities=16%  Similarity=0.148  Sum_probs=74.7

Q ss_pred             EEEeCCHHHHHHHHHhccCCEEEEEe-c-------cCCCceEEEEEecCCCCcceEEEeeecCCCccccCCCCceEEEEE
Q 022835           28 VYRVGDLDRTIKFYTECFGMKLLRKR-D-------VPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        28 ~i~v~d~~~~~~FY~~~lG~~~~~~~-~-------~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~   99 (291)
                      -+--.|.++|.+||+++||-..+... .       .+.+....+.+.+++  ..++  ....  ...+..+.+ .++++.
T Consensus         7 L~F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g--~~lm--~sD~--~~~~~~~~~-~sl~l~   79 (156)
T d1u69a_           7 LWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG--IPCL--GLNG--GPAFRHSEA-FSFQVA   79 (156)
T ss_dssp             EEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETT--EEEE--EEEC--CTTCCCCTT-EEEEEE
T ss_pred             eeECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECC--eEEE--eecC--CCCCCCCCC-eEEEEe
Confidence            34457999999999999965433321 1       122334445565542  2222  2221  122233333 578888


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCccCCCCceEEEEEECCCCCEEEEEEcCCCCCCceeEeeeeCCchhcHHHHHHhhC
Q 022835          100 TED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG  176 (291)
Q Consensus       100 v~d---i~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~~~~~hv~l~v~d~~~~~~fy~~~lG  176 (291)
                      ++|   ++.++++|.+.|- +     ..+.|     .++|.-|..|.|+.+.-      .--+..+|.+++.+-++..|.
T Consensus        80 ~d~~eE~d~~f~~LsegG~-~-----~~~~G-----~v~DkFGV~Wqi~~~~~------~~~~~~~~~~~~~~~~~a~~~  142 (156)
T d1u69a_          80 TDDQAETDRLWNAIVDNGG-E-----ESACG-----WCRDKWGISWQITPRVL------SEAIASPDRAAARRAFEAMMT  142 (156)
T ss_dssp             ESSHHHHHHHHHHHHHTTC-E-----ECSTT-----EEECTTSCEEEEEEHHH------HHHHTCSSHHHHHHHHHHHTT
T ss_pred             cCCHHHHHHHHHHHhccCC-C-----CCCCe-----EEECCCCCEEEeChHHH------HHHhcCCCHHHHHHHHHHHHc
Confidence            876   5567777776662 2     22333     37999999999987630      001123567777888888777


Q ss_pred             Ceee
Q 022835          177 MKLL  180 (291)
Q Consensus       177 ~~~~  180 (291)
                      ++..
T Consensus       143 m~k~  146 (156)
T d1u69a_         143 MGRI  146 (156)
T ss_dssp             CSSC
T ss_pred             CcCe
Confidence            7643

>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2258
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=81.57  E-value=1.4  Score=29.71  Aligned_cols=31  Identities=13%  Similarity=0.241  Sum_probs=23.8

Q ss_pred             eeEEEEEEeCCHHHHHHHHHhccCCEEEEEecc
Q 022835           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDV   55 (291)
Q Consensus        23 ~i~hv~i~v~d~~~~~~FY~~~lG~~~~~~~~~   55 (291)
                      ++.++.+.+.|.. +.+||++ +||+...+...
T Consensus        93 g~~~i~l~~~n~~-a~~fY~k-~GF~~~g~~~~  123 (137)
T d2g3aa1          93 GCMGAYIDTMNPD-ALRTYER-YGFTKIGSLGP  123 (137)
T ss_dssp             TCCEEEEEESCHH-HHHHHHH-HTCEEEEEECC
T ss_pred             CCceEEEecccHh-hHHHHHh-CCCEEEEEECC
Confidence            4556777787754 7999999 99999876543