Citrus Sinensis ID: 022858

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-
Protein Sequence
MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLASMLNVSSAMSSDGDRSIAPAKTLLLSVIGLVLIIKILFLVAIWLRRSRHSGSNVTPDTQSLTINKFLNAMELENPIRFTSQQLSIATDNFTHLLVSGGSGALYKLQRDFWQQNQCVSEDFTWKLGLRTVHQKGPSF
Secondary Structure (PSIPRED)
ccEEHHHHHHHHHHHHcccccccEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHccccccEEccccccccHHHHHHHHHHHHHHcccccccccccccccccEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHccccccccEEcHHHHHHHccccccccccEEEEccEEEccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHccccEEEEEcccHHHEEEcccccccccccHHHHHcccccccccHHHHHEEEEEEEcccccccccccccccHHHHHHHHHHHHcccHHHHccHHHcccccHHHHHHHHHHHHHHccccHcccccccHHHHEHEccccccccccccccccccccccccccccccEcHHcHHHEHEEEEEEEEEEcccccccccccHHHHHHHHHHHHcHccccccEEEcccEEEEEcccHHHHccccccHHHHHHHHHHHHHcccccHHHHHHccccEcccccccc
Coil and Loop (DISEMBL)
MHIIAIGTAEGIVSLHDGCQQQIIHynikpenilldvkfwtpgyaapetwmsfpvthkcdvrsfGMLLFEILGRRRMRTcqkarsgfpsgFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVqykpeampsmtvrpakFMLHGSLASMLNVSsamssdgdrsiapAKTLLLSVIGLVLIIKILFLVAIWLRrsrhsgsnvtpdtqsLTINKFLNAMElenpirftsqqlsiatdNFTHLLVSGGSGALYKLQRDFWqqnqcvsedftwklGLRTVHQKGPSF
Flexible Loop (DISEMBL)
MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKarsgfpsgfkWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLASMLNVSSAMSSDGDRSIAPAKTLLLSVIGLVLIIKILFLVAIWLRRSrhsgsnvtpdtqsLTINKFLNAMELENPIRFTSQQLSIATDNFTHLLVSGGSGALYKLQRDFWQQNQCVSEDFTWKLGLrtvhqkgpsf
Low Complexity Region (SEG)
MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLASMLNVSSAMSSDGDRSIAPAKTlllsviglvliikilflvaiWLRRSRHSGSNVTPDTQSLTINKFLNAMELENPIRFTSQQLSIATDNFTHLLVSGGSGALYKLQRDFWQQNQCVSEDFTWKLGLRTVHQKGPSF
Disordered region (IsUnstruct)
**IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA****TVRPAKFMLHG********************APAKTLLLSVIGLVLIIKILFLVAIWLRRS************SLTINKFLNAMELENPIRFTSQQLSIATDNFTHLLVSGGSGALYKLQRDFWQQNQCVSEDFTWKLGLRTV*******
Disordered Region (DISOPRED)
MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGR*R************SGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLA***NV****SSDGDRSIAPAKTLLLSVIGLVLIIKILFLVAIWLRRSRHS***************FLNAMELENPIRFTSQQLSIATDNFTHLLVSGGSGALYKLQRDFWQQNQCVSEDFTWKLGL**********
Disordered Region (DISEMBL)
MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLASMLNV*********RSIAPAKTLLLSVIGLVLIIKILFLVAIWLRRSRH********TQSLTINKFLNAMELENPIRFTSQQLSIATDNFTHLLVSGGSGALYKLQRDFWQQNQCVSEDFTWKLGLRT********
Disordered Region (DISPRO)
MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLA***********************LLSVIGLVLIIKILFLVAIWLRRS*****NVTPDTQSLTINKFLNAMELENPIRFTSQQLSIATDNFTHLLVSGGSGALYKLQRDFWQQNQCVSEDFTWKLGLRTV*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLASMLNVSSAMSSDGDRSIAPAKTLLLSVIGLVLIIKILFLVAIWLRRSRHSGSNVTPDTQSLTINKFLNAMELENPIRFTSQQLSIATDNFTHLLVSGGSGALYKLQRDFWQQNQCVSEDFTWKLGLRTVHQKGPSF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	291	2.2.26 [Sep-21-2011]
Q9FID5	806	Probable receptor-like pr	no	no	0.529	0.191	0.352	3e-20
Q3ECH2	892	Probable receptor-like pr	no	no	0.532	0.173	0.328	3e-20
Q9FID6	813	Probable receptor-like pr	no	no	0.518	0.185	0.324	3e-19
Q8RWZ5	821	G-type lectin S-receptor-	no	no	0.453	0.160	0.356	1e-18
Q39203	797	G-type lectin S-receptor-	no	no	0.463	0.169	0.346	5e-18
Q39202	832	G-type lectin S-receptor-	no	no	0.481	0.168	0.322	3e-16
Q9XID3	829	G-type lectin S-receptor-	no	no	0.467	0.164	0.323	1e-15
Q9FLV4	872	G-type lectin S-receptor-	no	no	0.467	0.155	0.347	1e-15
O64477	828	G-type lectin S-receptor-	no	no	0.463	0.163	0.349	5e-14
P93050	617	Probable LRR receptor-lik	no	no	0.467	0.220	0.329	3e-13

>sp|Q9FID5|Y5393_ARATH Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1

 Score = 99.4 bits (246), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 95/187 (50%), Gaps = 33/187 (17%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------- 40
           ++ IA+G A G+  LH GC+ +I+H++IKP+NILLD                        
Sbjct: 595 LYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDGNLCPKVSDFGLAKLCEKRESVLS 654

Query: 41  ------TPGYAAPETW--MSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGF- 91
                 T GY APE +  M   V+HK DV SFGML+ +++G R     +   S   S + 
Sbjct: 655 LMDTRGTIGYIAPEVFSRMYGRVSHKSDVYSFGMLVIDMIGARSKEIVETVDSAASSTYF 714

Query: 92  -KWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFML 150
             W++K LE GE Q  I    + K  KE A++M +V LW +Q  P   PSM  R  + M+
Sbjct: 715 PDWIYKDLEDGE-QTWIFGDEITKEEKEIAKKMIVVGLWCIQPCPSDRPSMN-RVVE-MM 771

Query: 151 HGSLASM 157
            GSL ++
Sbjct: 772 EGSLDAL 778

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q3ECH2|Y1670_ARATH Probable receptor-like protein kinase At1g67000 OS=Arabidopsis thaliana GN=At1g67000 PE=2 SV=2

 Score = 99.0 bits (245), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 40/195 (20%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------- 40
           ++ IA+G A G+  LH GC+ +I+H++IKP+N+LLD                        
Sbjct: 654 LYGIALGVARGLEYLHYGCKTRIVHFDIKPQNVLLDDNLCPKVSDFGLAKLCEKKESILS 713

Query: 41  ------TPGYAAPE--TWMSFPVTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGF 91
                 T GY APE  + +   V+HK DV S+GML+ E++G R++ R  Q +RS   S +
Sbjct: 714 LLDTRGTIGYIAPEMISRLYGSVSHKSDVYSYGMLVLEMIGARKKERFDQNSRSDGSSIY 773

Query: 92  --KWVWKKLEKGEFQDL-------IIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
             +W++K LEK   +D+       +I  G+    +E A +M LV LW +Q  P   P M 
Sbjct: 774 FPEWIYKDLEKANIKDIEKTENGGLIENGISSEEEEIARKMTLVGLWCIQSSPSDRPPMN 833

Query: 143 VRPAKFMLHGSLASM 157
                 M+ GSL ++
Sbjct: 834 --KVVEMMEGSLDAL 846

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FID6|Y5392_ARATH Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1

 Score = 95.9 bits (237), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 37/188 (19%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------- 40
           ++ IA+G A G+  LH GC+ +I+H++IKP+NILLD  F                     
Sbjct: 593 LYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDDNFCPKVADFGLAKLCEKRESILS 652

Query: 41  ------TPGYAAPE--TWMSFPVTHKCDVRSFGMLLFEILGRR---RMRTCQKARSGFPS 89
                 T GY APE  + M   ++HK DV S+GML+ +++G R      TC  + + FP 
Sbjct: 653 LIDTRGTIGYIAPEVVSRMYGGISHKSDVYSYGMLVLDMIGARNKVETTTCNGSTAYFPD 712

Query: 90  GFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFM 149
              W++K LE G+ Q  II   + + + +  ++M LV+LW ++  P   P M       M
Sbjct: 713 ---WIYKDLENGD-QTWIIGDEINEEDNKIVKKMILVSLWCIRPCPSDRPPM--NKVVEM 766

Query: 150 LHGSLASM 157
           + GSL ++
Sbjct: 767 IEGSLDAL 774

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8RWZ5|SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1

 Score = 94.0 bits (232), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 88/171 (51%), Gaps = 39/171 (22%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
           IA+GTA+G+  LH+ C  +I+H +IKPENILLD  F                        
Sbjct: 595 IALGTAKGLAYLHEDCDARIVHCDIKPENILLDDNFNAKVSDFGLAKLMTREQSHVFTTM 654

Query: 40  -WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRR----MRTCQKARSGFPSGFKWV 94
             T GY APE   ++ ++ K DV S+GM+L E++G R+      T +K    FPS   + 
Sbjct: 655 RGTRGYLAPEWITNYAISEKSDVYSYGMVLLELIGGRKNYDPSETSEKCH--FPS---FA 709

Query: 95  WKKLEKGEFQDLIIVCGMEKN---NKEKAERMALVALWRVQYKPEAMPSMT 142
           +KK+E+G+  D  IV G  KN     E+ +R    ALW +Q   +  PSM+
Sbjct: 710 FKKMEEGKLMD--IVDGKMKNVDVTDERVQRAMKTALWCIQEDMQTRPSMS 758

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS=Arabidopsis thaliana GN=SD22 PE=1 SV=1

 Score = 91.7 bits (226), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 80/173 (46%), Gaps = 38/173 (21%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
           IA+GTA+GI  LH+GC+  IIH +IKPENILLD  +                        
Sbjct: 562 IALGTAKGIAYLHEGCRDCIIHCDIKPENILLDSDYNAKVSDFGLAKLLGRDFSRVLATM 621

Query: 40  -WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSG----------FP 88
             T GY APE     P+T K DV SFGM L E++G RR         G          FP
Sbjct: 622 RGTWGYVAPEWISGLPITTKADVYSFGMTLLELIGGRRNVIVNSDTLGEKETEPEKWFFP 681

Query: 89  SGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSM 141
               W  +++ +G    ++      + N E+  RMA VA+W +Q   E  P+M
Sbjct: 682 ---PWAAREIIQGNVDSVVDSRLNGEYNTEEVTRMATVAIWCIQDNEEIRPAM 731

Serine/threonine-protein kinase.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2

 Score = 85.9 bits (211), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 37/177 (20%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFWTP--------------------- 42
           IA+  A GI+ LH+ C +QIIH +IKP+NILLD +++TP                     
Sbjct: 634 IAVAIARGILYLHEECSEQIIHCDIKPQNILLD-EYYTPRISDFGLAKLLLMNQTYTLTN 692

Query: 43  -----GYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSG--FKWVW 95
                GY APE + + P+T K DV S+G++L EI+       C+KA     +     W +
Sbjct: 693 IRGTKGYVAPEWFRNSPITSKVDVYSYGVMLLEIV------CCKKAVDLEDNVILINWAY 746

Query: 96  KKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHG 152
               +G  +DL        N+ E  ER   +A+W +Q +    P+M  R    ML G
Sbjct: 747 DCFRQGRLEDLTEDDSEAMNDMETVERYVKIAIWCIQEEHGMRPNM--RNVTQMLEG 801

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana GN=At1g34300 PE=1 SV=1

 Score = 84.3 bits (207), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 31/167 (18%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
           IA+GTA+GI  LH+ C+  I+H +IKPENIL+D  F                        
Sbjct: 585 IALGTAKGITYLHEECRDCIVHCDIKPENILVDDNFAAKVSDFGLAKLLNPKDNRYNMSS 644

Query: 40  --WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-GRRRMRTCQKARSGFPSGFKWVWK 96
              T GY APE   + P+T K DV S+GM+L E++ G+R     +K      S   W ++
Sbjct: 645 VRGTRGYLAPEWLANLPITSKSDVYSYGMVLLELVSGKRNFDVSEKTNHKKFS--IWAYE 702

Query: 97  KLEKGEFQDLIIVCGMEKN--NKEKAERMALVALWRVQYKPEAMPSM 141
           + EKG  + ++     E    + E+  RM   + W +Q +P   P+M
Sbjct: 703 EFEKGNTKAILDTRLSEDQTVDMEQVMRMVKTSFWCIQEQPLQRPTM 749

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1

 Score = 83.6 bits (205), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 76/164 (46%), Gaps = 28/164 (17%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
           IA+ TA+GI   H+ C+ +IIH +IKPENILLD  F                        
Sbjct: 633 IAVATAQGIAYFHEQCRNRIIHCDIKPENILLDDNFCPKVSDFGLAKMMGREHSHVVTMI 692

Query: 41  --TPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-GRRRMRTCQKARSGFPSGFKWVWKK 97
             T GY APE   + P+T K DV S+GMLL EI+ GRR +     A   F  G  W +K+
Sbjct: 693 RGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSYDAEDFFYPG--WAYKE 750

Query: 98  LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSM 141
           L  G     +         +E+  +   VA W +Q +    PSM
Sbjct: 751 LTNGTSLKAVDKRLQGVAEEEEVVKALKVAFWCIQDEVSMRPSM 794

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1

 Score = 78.6 bits (192), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 82/169 (48%), Gaps = 34/169 (20%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
           IA+GTA G+  LHD C+  IIH +IKPENILLD +F                        
Sbjct: 596 IALGTARGLAYLHDECRDCIIHCDIKPENILLDSQFCPKVADFGLAKLVGRDFSRVLTTM 655

Query: 41  --TPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-GRRRMRTCQKAR-SGFPSGFKWVWK 96
             T GY APE      +T K DV S+GM+LFE++ GRR     +  +   FPS   W   
Sbjct: 656 RGTRGYLAPEWISGVAITAKADVYSYGMMLFELVSGRRNTEQSENEKVRFFPS---WAAT 712

Query: 97  KLEK-GEFQDLIIVCGMEKN--NKEKAERMALVALWRVQYKPEAMPSMT 142
            L K G+ + L+    +E +  + E+  R   VA W +Q +    P+M+
Sbjct: 713 ILTKDGDIRSLVDP-RLEGDAVDIEEVTRACKVACWCIQDEESHRPAMS 760

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P93050|RKF3_ARATH Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1

 Score = 75.9 bits (185), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 28/164 (17%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
           IA+G A G+  LH G Q  IIH +IK  NILLD +F                        
Sbjct: 389 IALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRV 448

Query: 40  -WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFP-SGFKWVWKK 97
             T GY APE  +   +T K DV SFG++L E+L RR+     +   G P S   W W  
Sbjct: 449 AGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDE--EGQPVSVADWAWSL 506

Query: 98  LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSM 141
           + +G+  D++     EK   E  E+  L+A+     +  A P+M
Sbjct: 507 VREGQTLDVVEDGMPEKGPPEVLEKYVLIAVLCSHPQLHARPTM 550

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
356556192	414	PREDICTED: G-type lectin S-receptor-like	0.512	0.359	0.510	6e-41
357449319	463	Receptor-like protein kinase [Medicago t	0.512	0.321	0.521	8e-41
356532652	407	PREDICTED: G-type lectin S-receptor-like	0.512	0.366	0.519	6e-40
356532654	418	PREDICTED: G-type lectin S-receptor-like	0.512	0.356	0.505	7e-40
351726118	364	protein kinase [Glycine max] gi|22345256	0.512	0.409	0.5	2e-38
357449317	396	Protein kinase [Medicago truncatula] gi|	0.470	0.345	0.511	4e-38
357449331	411	BRASSINOSTEROID INSENSITIVE 1-associated	0.512	0.362	0.489	5e-38
356558282	443	PREDICTED: G-type lectin S-receptor-like	0.512	0.336	0.497	1e-36
242074620	371	hypothetical protein SORBIDRAFT_06g03119	0.546	0.428	0.437	6e-36
225454761	491	PREDICTED: G-type lectin S-receptor-like	0.584	0.346	0.403	3e-35

>gi|356556192|ref|XP_003546410.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Glycine max]

 Score =  174 bits (440), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 93/182 (51%), Positives = 113/182 (62%), Gaps = 33/182 (18%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--------------------- 39
           +H IA+GTA GI  LH+ C+Q+IIHY+IKP NILLD  F                     
Sbjct: 173 LHEIAVGTARGIAYLHEECRQRIIHYDIKPGNILLDRNFNPKVADFGLAKLCNKDNTHIT 232

Query: 40  -----WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSG--FPSGFK 92
                 TPGYAAPE WM FP+THKCDV SFGMLLFEI+GRRR    ++A S   FP    
Sbjct: 233 MTGGRGTPGYAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNLDIKRAESQEWFPI--- 289

Query: 93  WVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHG 152
           WVWK+ +  +  +LIIVCG+E+ +KE AERM  +ALW VQY+PE  P M+V     ML G
Sbjct: 290 WVWKRFDTAQLGELIIVCGIEEKSKEIAERMIKIALWCVQYRPELRPIMSV--VVKMLEG 347

Query: 153 SL 154
           SL
Sbjct: 348 SL 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357449319|ref|XP_003594936.1| Receptor-like protein kinase [Medicago truncatula] gi|355483984|gb|AES65187.1| Receptor-like protein kinase [Medicago truncatula]

 Score =  173 bits (438), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 95/182 (52%), Positives = 110/182 (60%), Gaps = 33/182 (18%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------- 40
           +H IAIGTA GI  LH+ CQ +IIHY+IKP NILLD  F+                    
Sbjct: 225 LHEIAIGTARGIAYLHEECQHRIIHYDIKPGNILLDKNFYPKVADFGLAKNCNRENTHIT 284

Query: 41  ------TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSG--FPSGFK 92
                 TPGYAAPE WM FP+THKCDV SFGMLLFEI+GRRR    +   S   FP    
Sbjct: 285 MTGGRGTPGYAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNLAIKNTESQEWFPI--- 341

Query: 93  WVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHG 152
           WVWKK + G   + +IVCG+E+ NKE AERM  VALW VQY+PE  P M+V     ML G
Sbjct: 342 WVWKKKDAGLLGEAMIVCGIEEKNKEIAERMIKVALWCVQYRPELRPIMSVVVK--MLEG 399

Query: 153 SL 154
           SL
Sbjct: 400 SL 401

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532652|ref|XP_003534885.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080-like [Glycine max]

 Score =  170 bits (431), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 95/183 (51%), Positives = 111/183 (60%), Gaps = 34/183 (18%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--------------------- 39
           +H IA+GTA GI  LH+ CQQ+IIHY+IKP NILLD  F                     
Sbjct: 167 LHEIAVGTARGIAYLHEECQQRIIHYDIKPGNILLDRNFNPKVADFGLAKLCNREITHLT 226

Query: 40  -----WTPGYAAPETWM-SFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSG--FPSGF 91
                 TPGYAAPE WM +FPVTHKCDV SFGMLLFEI+GRRR    +   S   FP   
Sbjct: 227 LTKSRGTPGYAAPELWMPNFPVTHKCDVYSFGMLLFEIIGRRRNLDVELVESQEWFPV-- 284

Query: 92  KWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLH 151
            WVWK+ E GEF++LII CG+E+ N E AERM  VAL  VQY+P+  P M  R    ML 
Sbjct: 285 -WVWKRFEAGEFEELIIACGIEEKNGEIAERMVNVALLCVQYRPDLRPIM--RDVVKMLE 341

Query: 152 GSL 154
           GS+
Sbjct: 342 GSV 344

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532654|ref|XP_003534886.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Glycine max]

 Score =  170 bits (430), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 92/182 (50%), Positives = 113/182 (62%), Gaps = 33/182 (18%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--------------------- 39
           +H IA+GTA GI  LH+ CQQ+IIHY+IKP NILLD  F                     
Sbjct: 177 LHDIAVGTARGIAYLHEECQQRIIHYDIKPGNILLDRNFNPKVADFGLAKLCNRDNTHIT 236

Query: 40  -----WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSG--FPSGFK 92
                 TPGYAAPE WM FP+THKCDV S+GMLLFEI+GRRR    + A S   FP+   
Sbjct: 237 MTGGRGTPGYAAPELWMPFPITHKCDVYSYGMLLFEIIGRRRNLDIKLAESQEWFPT--- 293

Query: 93  WVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHG 152
           WVWKK++ G+  +L+IVC +E+ +KE AERM  +ALW VQY+ E  P M+V     ML G
Sbjct: 294 WVWKKIDTGQLGELMIVCEIEERSKEIAERMIKIALWCVQYRQELRPIMSV--VVKMLEG 351

Query: 153 SL 154
           SL
Sbjct: 352 SL 353

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726118|ref|NP_001235580.1| protein kinase [Glycine max] gi|223452564|gb|ACM89609.1| protein kinase [Glycine max]

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/182 (50%), Positives = 107/182 (58%), Gaps = 33/182 (18%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------- 40
           +H IA+GTA GI  LH+ CQQ+IIHY+IKP NILLD  F                     
Sbjct: 124 LHEIAVGTARGIAYLHEECQQRIIHYDIKPGNILLDRNFCPKVADFGLAKLCNRDNTHIS 183

Query: 41  ------TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSG--FPSGFK 92
                 TPGYAAPE W+ FPVTHKCDV SFGMLLFEI+GRRR        S   FP    
Sbjct: 184 MTGGRGTPGYAAPELWLPFPVTHKCDVYSFGMLLFEIIGRRRNHNINLPESQVWFP---M 240

Query: 93  WVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHG 152
           WVW++ +    +DLI  CG+E  N+E AER+  VAL  VQYKPEA P M+V     ML G
Sbjct: 241 WVWERFDAENVEDLISACGIEDQNREIAERIVKVALSCVQYKPEARPIMSV--VVKMLEG 298

Query: 153 SL 154
           S+
Sbjct: 299 SV 300

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357449317|ref|XP_003594935.1| Protein kinase [Medicago truncatula] gi|355483983|gb|AES65186.1| Protein kinase [Medicago truncatula]

 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 86/168 (51%), Positives = 100/168 (59%), Gaps = 31/168 (18%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
           IAIGTA GI  LH+ CQQ+IIHY+IKP NILLD  F                        
Sbjct: 160 IAIGTARGIAYLHEECQQRIIHYDIKPGNILLDTNFNPKVADFGLAKLCNRENTHITMSG 219

Query: 40  --WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSG--FPSGFKWVW 95
              TPGYAAPE WM FPVTHKCDV SFG+LLFEI+GRRR      A S   FP    WVW
Sbjct: 220 GRGTPGYAAPELWMPFPVTHKCDVYSFGILLFEIIGRRRNHDVNLAESQEWFPI---WVW 276

Query: 96  KKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTV 143
           KK +  +  +L+  CG+E+ N E  ERM  VAL  VQY+PE+ P M+V
Sbjct: 277 KKFDAEQVNELVAACGIEEKNMEIVERMVKVALACVQYRPESRPKMSV 324

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357449331|ref|XP_003594942.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase [Medicago truncatula] gi|124359372|gb|ABN05838.1| Protein kinase [Medicago truncatula] gi|355483990|gb|AES65193.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase [Medicago truncatula]

 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 89/182 (48%), Positives = 108/182 (59%), Gaps = 33/182 (18%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--------------------- 39
           +H IAIGTA GI  LH+ C+ +I+HY+IKP NILLD  F                     
Sbjct: 173 LHEIAIGTARGIAYLHELCEHRIVHYDIKPGNILLDGNFNPKVADFGLAKLCNRENTHIT 232

Query: 40  -----WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSG--FPSGFK 92
                 TPGYAAPE WM FP+THKCDV SFGMLLFEI+GRRR    +   S   FP    
Sbjct: 233 MTGGRGTPGYAAPELWMPFPITHKCDVYSFGMLLFEIVGRRRNLDIKNTESQEWFPI--- 289

Query: 93  WVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHG 152
           WVWKK + G  ++ +IVCG+E+ N+E AERM  VALW VQY+ +  P M+      ML G
Sbjct: 290 WVWKKFDAGLLEEAMIVCGIEEKNREIAERMVKVALWCVQYRQQLRPMMS--DVVKMLEG 347

Query: 153 SL 154
           SL
Sbjct: 348 SL 349

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558282|ref|XP_003547436.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Glycine max]

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/183 (49%), Positives = 109/183 (59%), Gaps = 34/183 (18%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--------------------- 39
           +H IAIGTA+G+  LH+ CQQ+IIHY+IKP NILLD                        
Sbjct: 206 LHEIAIGTAKGLAYLHEECQQRIIHYDIKPGNILLDRNLNPKVADFGLAKVCNRKNTHIT 265

Query: 40  -----WTPGYAAPETWM-SFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSG--FPSGF 91
                 TPGYAAPE WM +FP+THKCDV SFGMLLFEILGRRR      A S   FP   
Sbjct: 266 LTRGRGTPGYAAPELWMPNFPITHKCDVYSFGMLLFEILGRRRNLDIDHAESQEWFPI-- 323

Query: 92  KWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLH 151
            WVWK+ E  E ++LI+ CG+E  N+E AERM  VAL  V Y+ E+ P M+V     ML 
Sbjct: 324 -WVWKRFEAEEAKELIVACGIEDQNREIAERMVKVALLCVLYRQESRPIMSV--VVKMLE 380

Query: 152 GSL 154
           GS+
Sbjct: 381 GSI 383

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242074620|ref|XP_002447246.1| hypothetical protein SORBIDRAFT_06g031195 [Sorghum bicolor] gi|241938429|gb|EES11574.1| hypothetical protein SORBIDRAFT_06g031195 [Sorghum bicolor]

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 117/199 (58%), Gaps = 40/199 (20%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--------------------- 39
           ++ I +GTA G+  LH+ CQ +IIHY+IKP N+LL   +                     
Sbjct: 159 LYGIVVGTARGVRYLHEECQHRIIHYDIKPGNVLLTADYTPKVADFGLARLCNRDNTHLT 218

Query: 40  -----WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQK---ARSGFPSGF 91
                 TPGYAAPE W+  PVTHKCDV SFGML+FEILGRRR    Q    ++  +P   
Sbjct: 219 MTGARGTPGYAAPELWLPLPVTHKCDVYSFGMLVFEILGRRRNLELQHPAMSQEWYP--- 275

Query: 92  KWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT--VRPAKFM 149
           KWVW++ ++G+F D++   G+   ++EKAERM  VALW VQY+PEA PSM+  VR    M
Sbjct: 276 KWVWQRFDQGKFDDVMAASGIHAKDREKAERMCKVALWCVQYQPEARPSMSSVVR----M 331

Query: 150 LHG--SLASMLNVSSAMSS 166
           L G   +A  +N  + M+S
Sbjct: 332 LEGEEEIARPVNPFAYMAS 350

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454761|ref|XP_002272528.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Vitis vinifera]

 Score =  155 bits (391), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 119/213 (55%), Gaps = 43/213 (20%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
           IA+GTA+GI  LH+ C+Q+IIHY+IKP N+LLD  F                        
Sbjct: 264 IAVGTAKGIAYLHEECRQRIIHYDIKPANVLLDAVFSPKLADFGLAKLCNRDSTQVPVTG 323

Query: 40  --WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMR--TCQKARSGFPSGFKWVW 95
              TPGYAAPE W  +PVT KCDV SFGMLLFE++GRRR    +  + R   P   +W W
Sbjct: 324 FRGTPGYAAPELWKPYPVTCKCDVYSFGMLLFEMVGRRRNHDASLSETRQWLP---RWTW 380

Query: 96  KKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSM-----------TVR 144
           +  EK E  +++ +CG+++ N EKA RM +VA+W VQY PEA P+M            + 
Sbjct: 381 EMFEKNELPEMLSLCGIKETNIEKAGRMCMVAMWCVQYLPEARPTMGKVVKMLEGETEIP 440

Query: 145 PAKFMLHGSLASMLNVSSAMSSDGDRSIAPAKT 177
           P  +    S+ ++++ SS  S D D S +  +T
Sbjct: 441 PPPYPFQRSMPNLVS-SSGNSEDTDPSESTRET 472

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
TAIR|locus:2176697	588	AT5G38240 [Arabidopsis thalian	0.429	0.212	0.370	1.1e-21
TAIR|locus:2176707	579	AT5G38250 [Arabidopsis thalian	0.429	0.215	0.362	1.2e-19
TAIR|locus:2019688	674	AT1G66930 [Arabidopsis thalian	0.432	0.186	0.375	1.4e-19
TAIR|locus:2176717	638	AT5G38260 [Arabidopsis thalian	0.405	0.184	0.389	7.7e-18
TAIR|locus:2019713	892	AT1G67000 [Arabidopsis thalian	0.432	0.141	0.363	1e-17
TAIR|locus:2020583	799	AT1G70250 [Arabidopsis thalian	0.395	0.143	0.363	4.5e-17
TAIR|locus:2177142	813	AT5G39020 [Arabidopsis thalian	0.419	0.150	0.338	1.6e-15
TAIR|locus:2141862	853	AT4G18250 [Arabidopsis thalian	0.432	0.147	0.366	1.7e-15
TAIR|locus:2116525	821	SD2-5 "S-domain-2 5" [Arabidop	0.326	0.115	0.366	2.6e-15
TAIR|locus:2204480	666	AT1G66910 [Arabidopsis thalian	0.412	0.180	0.328	3.5e-15

TAIR|locus:2176697 AT5G38240 [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
 Identities = 50/135 (37%), Positives = 75/135 (55%)

Query:    29 KPENIL--LDVKFWTPGYAAPETWMSF--PVTHKCDVRSFGMLLFEILGRRRMRTCQKAR 84
             K E+IL  LD +  T GY APE +      V+HK DV S+GML+ E+ G R     Q A 
Sbjct:   425 KQESILSLLDTR-GTIGYIAPELFSRVYGNVSHKSDVYSYGMLVLEMTGARNKERVQNAD 483

Query:    85 SGFPSGF--KWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
             S   S +   W++K LE G++  L+   G+ +  ++ A++M LV LW +Q++P   PSM 
Sbjct:   484 SNNSSAYFPDWIFKDLENGDYVKLL-ADGLTREEEDIAKKMILVGLWCIQFRPSDRPSMN 542

Query:   143 VRPAKFMLHGSLASM 157
                   M+ G+L S+
Sbjct:   543 --KVVGMMEGNLDSL 555

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2176707 AT5G38250 [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
 Identities = 49/135 (36%), Positives = 76/135 (56%)

Query:    29 KPENIL--LDVKFWTPGYAAPETW--MSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKAR 84
             K E+IL  LD +  T GY APE +  M   V+HK DV S+GML+ E++G R     Q A 
Sbjct:   417 KQESILSLLDTR-GTIGYIAPELFSRMYGSVSHKSDVYSYGMLVLEMIGARNKERVQNAD 475

Query:    85 SGFPSGF--KWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
                 S +   W++K LE  +    ++  G+ +  ++ A++M LV LW +Q++P   PSM 
Sbjct:   476 PNNSSAYFPDWIYKDLENFD-NTRLLGDGLTREEEKNAKKMILVGLWCIQFRPSDRPSMN 534

Query:   143 VRPAKFMLHGSLASM 157
              +  + M+ GSL S+
Sbjct:   535 -KVVE-MMEGSLDSL 547

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2019688 AT1G66930 [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
 Identities = 51/136 (37%), Positives = 78/136 (57%)

Query:    29 KPENI--LLDVKFWTPGYAAPE--TWMSFPVTHKCDVRSFGMLLFEILG-RRRMRTCQKA 83
             K E++  L+D +  T GY APE  + +   V+HK DV S+GML+FE++G R++ R  Q +
Sbjct:   497 KKESVMSLMDTR-GTIGYIAPEMISRVYGSVSHKSDVYSYGMLVFEMIGARKKERFGQNS 555

Query:    84 RSGFPSGF-KWVWKKLEKGEFQDLI-IVCGMEKNNKEKAERMALVALWRVQYKPEAMPSM 141
              +G    F +W++K LEK +  DL  I  G+    +E A++M LV LW +Q  P   P M
Sbjct:   556 ANGSSMYFPEWIYKDLEKADNGDLEHIEIGISSEEEEIAKKMTLVGLWCIQSSPSDRPPM 615

Query:   142 TVRPAKFMLHGSLASM 157
                    M+ GSL ++
Sbjct:   616 N--KVVEMMEGSLDAL 629

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2176717 AT5G38260 [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 7.7e-18, Sum P(2) = 7.7e-18
 Identities = 53/136 (38%), Positives = 73/136 (53%)

Query:    29 KPENIL--LDVKFWTPGYAAPETW--MSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKAR 84
             K E+IL  LD +  T GY APE +  M   V+HK DV S+GML+ E++G +     + A 
Sbjct:   471 KRESILSLLDAR-GTIGYIAPEVFSGMYGRVSHKSDVYSYGMLVLEMIGAKNKEIEETAA 529

Query:    85 SGFPSGF--KWVWKKLEKGE----FQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM 138
             S   S +   W++K LE GE    F D I      + +KE A++M LV LW +Q  P   
Sbjct:   530 SNSSSAYFPDWIYKNLENGEDTWKFGDEI-----SREDKEVAKKMTLVGLWCIQPSPLNR 584

Query:   139 PSMTVRPAKFMLHGSL 154
             P M  R  + M+ GSL
Sbjct:   585 PPMN-RIVE-MMEGSL 598

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2019713 AT1G67000 [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
 Identities = 52/143 (36%), Positives = 78/143 (54%)

Query:    29 KPENIL--LDVKFWTPGYAAPE--TWMSFPVTHKCDVRSFGMLLFEILG-RRRMRTCQKA 83
             K E+IL  LD +  T GY APE  + +   V+HK DV S+GML+ E++G R++ R  Q +
Sbjct:   707 KKESILSLLDTR-GTIGYIAPEMISRLYGSVSHKSDVYSYGMLVLEMIGARKKERFDQNS 765

Query:    84 RSGFPSGF--KWVWKKLEKGEFQDL-------IIVCGMEKNNKEKAERMALVALWRVQYK 134
             RS   S +  +W++K LEK   +D+       +I  G+    +E A +M LV LW +Q  
Sbjct:   766 RSDGSSIYFPEWIYKDLEKANIKDIEKTENGGLIENGISSEEEEIARKMTLVGLWCIQSS 825

Query:   135 PEAMPSMTVRPAKFMLHGSLASM 157
             P   P M       M+ GSL ++
Sbjct:   826 PSDRPPMN--KVVEMMEGSLDAL 846

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2020583 AT1G70250 [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
 Identities = 44/121 (36%), Positives = 69/121 (57%)

Query:    41 TPGYAAPETW-MSFP-VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGF--KWVWK 96
             T GY APE +  +F  V+HK DV S+GM++ E++G R +   Q A S   S +   W++K
Sbjct:   623 TIGYIAPEVFSQNFGGVSHKSDVYSYGMVVLEMIGARNIGRAQNAGSSNTSMYFPDWIYK 682

Query:    97 KLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLAS 156
              LEKGE    +     E+ +++  ++M LV LW +Q  P   P M+ +  + ML GSL +
Sbjct:   683 DLEKGEIMSFLADQITEEEDEKIVKKMVLVGLWCIQTNPYDRPPMS-KVVE-MLEGSLEA 740

Query:   157 M 157
             +
Sbjct:   741 L 741

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2177142 AT5G39020 [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
 Identities = 46/136 (33%), Positives = 76/136 (55%)

Query:    29 KPENIL--LDVKFWTPGYAAPE--TWMSFPVTHKCDVRSFGMLLFEILGRRRM---RTCQ 81
             K E+IL  +D +  T GY APE  + M   ++HK DV S+GML+ +++G R      TC 
Sbjct:   646 KRESILSLIDTR-GTIGYIAPEVVSRMYGGISHKSDVYSYGMLVLDMIGARNKVETTTCN 704

Query:    82 KARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSM 141
              + + FP    W++K LE G+ Q  II   + + + +  ++M LV+LW ++  P   P M
Sbjct:   705 GSTAYFPD---WIYKDLENGD-QTWIIGDEINEEDNKIVKKMILVSLWCIRPCPSDRPPM 760

Query:   142 TVRPAKFMLHGSLASM 157
               +  + M+ GSL ++
Sbjct:   761 N-KVVE-MIEGSLDAL 774

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009625 "response to insect" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0051707 "response to other organism" evidence=RCA

TAIR|locus:2141862 AT4G18250 [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
 Identities = 52/142 (36%), Positives = 73/142 (51%)

Query:    29 KPENIL--LDVKFWTPGYAAPETWMSF--PVTHKCDVRSFGMLLFEILG---RRRMRTCQ 81
             K E+I+  LD +  T GY APE +      V+HK DV S+GM++ E++G   R  + T  
Sbjct:   671 KKESIISMLDAR-GTVGYIAPEMFSKNYGGVSHKSDVYSYGMVVLEMIGATKREEVETSA 729

Query:    82 KARSG--FPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEK-AERMALVALWRVQYKPEAM 138
               +S   FP    WV++ LE+ E   L+    +E+  +EK  +RM LV LW +Q  P   
Sbjct:   730 TDKSSMYFPD---WVYEDLERKETMRLLEDHIIEEEEEEKIVKRMTLVGLWCIQTNPSDR 786

Query:   139 PSMTVRPAKFMLHGSLASMLNV 160
             P M  R    ML GS    L V
Sbjct:   787 PPM--RKVVEMLEGSRLEALQV 806

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2116525 SD2-5 "S-domain-2 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
 Identities = 40/109 (36%), Positives = 60/109 (55%)

Query:    41 TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRR----MRTCQKARSGFPSGFKWVWK 96
             T GY APE   ++ ++ K DV S+GM+L E++G R+      T +K    FPS   + +K
Sbjct:   657 TRGYLAPEWITNYAISEKSDVYSYGMVLLELIGGRKNYDPSETSEKCH--FPS---FAFK 711

Query:    97 KLEKGEFQDLIIVCGMEKN---NKEKAERMALVALWRVQYKPEAMPSMT 142
             K+E+G+  D  IV G  KN     E+ +R    ALW +Q   +  PSM+
Sbjct:   712 KMEEGKLMD--IVDGKMKNVDVTDERVQRAMKTALWCIQEDMQTRPSMS 758

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

TAIR|locus:2204480 AT1G66910 [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
 Identities = 42/128 (32%), Positives = 67/128 (52%)

Query:    34 LLDVKFWTPGYAAPETWMSF--PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGF 91
             L+D +  T GY APE +      V+HK DV S+GML+ +I+G R   + +   S   S +
Sbjct:   505 LMDTR-GTIGYIAPEVFSRVYGRVSHKSDVYSYGMLVLDIIGARNKTSTEDTTSSTSSMY 563

Query:    92 --KWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFM 149
               +W+++ LEK       I   +     E A++M LV LW +Q  P   P+M  R  + M
Sbjct:   564 FPEWIYRDLEKAH-NGKSIETAISNEEDEIAKKMTLVGLWCIQPWPLDRPAMN-RVVE-M 620

Query:   150 LHGSLASM 157
             + G+L ++
Sbjct:   621 MEGNLDAL 628

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	291
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-12
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-09
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-09
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-07
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-07
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-07
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	2e-06
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	1e-05
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-05
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-05
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	4e-05
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	4e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	4e-05
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	6e-05
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	8e-05
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	8e-05
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-04
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	3e-04
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-04
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	5e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	0.001
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	0.001
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	0.002

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 65.0 bits (159), Expect = 2e-12
 Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 29/97 (29%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD------------------------ 36
           +  I +   EG+  LH      IIH ++KPENILLD                        
Sbjct: 94  ILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLL 150

Query: 37  -VKFWTPGYAAPETWMS-FPVTHKCDVRSFGMLLFEI 71
                TP Y APE  +     + K D+ S G++L+E+
Sbjct: 151 KTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 25/90 (27%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILL----DVKFW------------------T 41
           I I    G+ +LH+   Q+I+H ++K  NILL     VK                    T
Sbjct: 108 IFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGT 164

Query: 42  PGYAAPETWMSFPVTHKCDVRSFGMLLFEI 71
           P Y APE W   P ++K D+ S G LL+E+
Sbjct: 165 PHYMAPEVWKGRPYSYKSDIWSLGCLLYEM 194

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 56.0 bits (136), Expect = 3e-09
 Identities = 33/131 (25%), Positives = 48/131 (36%), Gaps = 36/131 (27%)

Query: 8   TAEGIVSLHDGCQQQIIHYNIKPENILLD----VK--------FW-----------TPGY 44
               +  LH    + I+H ++KPENILLD    VK                     TP Y
Sbjct: 106 ILSALEYLHS---KGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEY 162

Query: 45  AAPETWMSFPVTHKCDVRSFGMLLFEILGRRR--------MRTCQKARSGFPSGFKWVWK 96
            APE  +        D+ S G++L+E+L  +         +   +K     P      W 
Sbjct: 163 MAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWD 222

Query: 97  KLEKGEFQDLI 107
                E +DLI
Sbjct: 223 ISP--EAKDLI 231

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 51.4 bits (124), Expect = 1e-07
 Identities = 39/143 (27%), Positives = 58/143 (40%), Gaps = 38/143 (26%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILL----DVK---F----------------W 40
           +     +G+  LH      IIH +IK  NILL    +VK   F                 
Sbjct: 103 VCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVG 159

Query: 41  TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRR-------RMRTCQK-ARSGFPSGFK 92
           TP + APE     P  +K D+ S G+   E+   +        M+   K A +G P G +
Sbjct: 160 TPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPP-GLR 218

Query: 93  WVWKKLEKGEFQDLIIVCGMEKN 115
              K  +  EF+D +  C ++KN
Sbjct: 219 NPEKWSD--EFKDFLKKC-LQKN 238

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 20/85 (23%)

Query: 8   TAEGIVSLHDGCQQQIIHYNIKPENILLD----VK----------------FWTPGYAAP 47
            AE ++ + D  Q+ IIH +IKPEN+L+D    +K                  TP Y AP
Sbjct: 103 IAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAP 162

Query: 48  ETWMSFPVTHKCDVRSFGMLLFEIL 72
           ET +        D  S G ++FE L
Sbjct: 163 ETILGVGDDKMSDWWSLGCVIFEFL 187

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 49.6 bits (119), Expect = 5e-07
 Identities = 39/141 (27%), Positives = 51/141 (36%), Gaps = 37/141 (26%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD-------------VKFW---------- 40
           IA+    G+  LH      IIH ++KPENILLD              K            
Sbjct: 103 IALQILRGLEYLHS---NGIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFV 159

Query: 41  -TPGYAAPETWM-SFPVTHKCDVRSFGMLLFEILGRR---------RMRTCQKARSGFPS 89
            TP Y APE  +       K DV S G++L+E+L  +               +   G P 
Sbjct: 160 GTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPL 219

Query: 90  GFKWVWKKLEKGEFQDLIIVC 110
            F          E +DLI  C
Sbjct: 220 EFDEPKWSSGSEEAKDLIKKC 240

Length = 260

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 48.7 bits (116), Expect = 2e-06
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 19/88 (21%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK-------------------FWTPGY 44
           IAIG A+ +  LH  C   ++  N+ PE I++D K                   F +  Y
Sbjct: 785 IAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAY 844

Query: 45  AAPETWMSFPVTHKCDVRSFGMLLFEIL 72
            APET  +  +T K D+  FG++L E+L
Sbjct: 845 VAPETRETKDITEKSDIYGFGLILIELL 872

Length = 968

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 26/91 (28%)

Query: 12  IVSLHDGCQQQIIHYNIKPENILL---------DVKF-----------------WTPGYA 45
           ++++H    + +IH +IK  NILL         D  F                  TP Y 
Sbjct: 153 LLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYV 212

Query: 46  APETWMSFPVTHKCDVRSFGMLLFEILGRRR 76
           APE W   P + K D+ S G+LL+E+L  +R
Sbjct: 213 APEIWRRKPYSKKADMFSLGVLLYELLTLKR 243

Length = 496

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 30/94 (31%), Positives = 38/94 (40%), Gaps = 25/94 (26%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK-------FWTPG------------- 43
           IA    +G+  LH    ++IIH +IKP NILL  K       F   G             
Sbjct: 110 IAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGT 166

Query: 44  --YAAPETWMSFPVTHKCDVRSFGMLLFEILGRR 75
             Y APE     P +   DV S G+ L E+   R
Sbjct: 167 SFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNR 200

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 34/108 (31%)

Query: 15  LHDGCQQQIIHYNIKPENILLDVK---------F--------W----TPGYAAPETWMSF 53
           LH      I++ ++KPEN+LLD           F        +    TP Y APE  +S 
Sbjct: 117 LHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSK 173

Query: 54  PVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSG---FPSGF 91
                 D  + G+L++E+L           ++  +K   G   FPS F
Sbjct: 174 GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFF 221

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 43.7 bits (104), Expect = 4e-05
 Identities = 25/101 (24%), Positives = 35/101 (34%), Gaps = 36/101 (35%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK------------------ 38
           +   A+  A G+  L     +  IH ++   N L+     VK                  
Sbjct: 104 LLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRK 160

Query: 39  -------FWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
                   W     APE+      T K DV SFG+LL+EI 
Sbjct: 161 RGGKLPIRWM----APESLKEGKFTSKSDVWSFGVLLWEIF 197

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 32/103 (31%)

Query: 2   HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK------------------- 38
            +  I  AE +++L       IIH ++KP+NIL+D    +K                   
Sbjct: 93  DVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLN 152

Query: 39  ---------FWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
                      TP Y APE  +    +   D  S G +L+E L
Sbjct: 153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFL 195

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 43.6 bits (104), Expect = 4e-05
 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 27/86 (31%)

Query: 15  LHDGCQQQIIHYNIKPENILLD----VK---F-----------------WTPGYAAPETW 50
           LH    ++I+H +IKP+NI L     VK   F                  TP Y +PE  
Sbjct: 119 LHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELC 175

Query: 51  MSFPVTHKCDVRSFGMLLFEILGRRR 76
            + P  +K D+ S G +L+E+   + 
Sbjct: 176 QNKPYNYKSDIWSLGCVLYELCTLKH 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 43.3 bits (103), Expect = 6e-05
 Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 32/93 (34%)

Query: 8   TAEGIVS----LHDGCQQQIIHYNIKPENILLD----VK-----FW-------------- 40
            AE IV     LH      II+ ++KPENILLD    +K                     
Sbjct: 99  AAE-IVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC 154

Query: 41  -TPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
            TP Y APE  +        D  S G+LL+E+L
Sbjct: 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEML 187

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 42.9 bits (102), Expect = 8e-05
 Identities = 25/101 (24%), Positives = 35/101 (34%), Gaps = 36/101 (35%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK------------------ 38
           +   A+  A G+  L     +  IH ++   N L+     VK                  
Sbjct: 105 LLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKV 161

Query: 39  -------FWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
                   W     APE+      T K DV SFG+LL+EI 
Sbjct: 162 KGGKLPIRWM----APESLKEGKFTSKSDVWSFGVLLWEIF 198

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 24/79 (30%)

Query: 21  QQIIHYNIKPENILLD-------------VKF----------WTPGYAAPETWMSFPVTH 57
           + IIH +IKP+NILLD              K            TPGY APE       + 
Sbjct: 119 KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSV 178

Query: 58  KCDVRSFGMLLFEIL-GRR 75
             D  S G+  +E L G+R
Sbjct: 179 AVDWWSLGVTAYECLRGKR 197

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 26/81 (32%)

Query: 15  LHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWM 51
           LH+   + II+ ++KPEN+LLD   +                       TP Y APE  +
Sbjct: 109 LHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIIL 165

Query: 52  SFPVTHKCDVRSFGMLLFEIL 72
           +       D  S G+LL+E+L
Sbjct: 166 NKGYDFSVDYWSLGILLYELL 186

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 24/89 (26%)

Query: 12  IVSLHDGCQQQIIHYNIKPENILLD-----VKF-------------------WTPGYAAP 47
           +++LH    + I+H ++K +NILLD     VK                     TP Y +P
Sbjct: 111 LLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISP 170

Query: 48  ETWMSFPVTHKCDVRSFGMLLFEILGRRR 76
           E     P   K D+ + G +L+E+   +R
Sbjct: 171 ELCEGKPYNQKSDIWALGCVLYELASLKR 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 24/89 (26%), Positives = 32/89 (35%), Gaps = 29/89 (32%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLD----VK---FW-------------------TPG 43
           EG+  LH      I+H +IK  NIL+D    VK   F                    TP 
Sbjct: 112 EGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPY 168

Query: 44  YAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
           + APE           D+ S G  + E+ 
Sbjct: 169 WMAPEVIRGEEYGRAADIWSLGCTVIEMA 197

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 20  QQQIIHYNIKPENILLD----VKFW--------------------TPGYAAPETWMSFPV 55
              ++H ++KP NI LD    VK                      TP Y +PE       
Sbjct: 128 GNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSY 187

Query: 56  THKCDVRSFGMLLFEI 71
             K D+ S G L++E+
Sbjct: 188 DEKSDIWSLGCLIYEL 203

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 36/124 (29%)

Query: 8   TAEGIVSLHDGCQQQIIHYNIKPENILLD-------------VKF----------WTPGY 44
            A+ I  L    Q++I++ ++KPEN+LLD             V+            TPGY
Sbjct: 101 AAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGY 160

Query: 45  AAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQ 104
            APE           D  + G  L+E++  R             S F+   +K+EK E +
Sbjct: 161 MAPEVLQGEVYDFSVDWFALGCTLYEMIAGR-------------SPFRQRKEKVEKEELK 207

Query: 105 DLII 108
              +
Sbjct: 208 RRTL 211

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 28/103 (27%), Positives = 37/103 (35%), Gaps = 37/103 (35%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD--------------------------- 36
           I       +  LH    + IIH +IKPENILLD                           
Sbjct: 106 ILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIP 162

Query: 37  ----VKFWTPGYAAPETWMSF---PVTHKCDVRSFGMLLFEIL 72
                   TPGY APE  +       +   D+ S G+ L+E+L
Sbjct: 163 ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELL 205

Length = 384

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 38.8 bits (90), Expect = 0.002
 Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 38/129 (29%)

Query: 11  GIVSLHDGCQQQIIHYNIKPENILL----DVKFW--------------------TPGYAA 46
           G+  +H+   ++++H +IK +NI L     VK                      TP Y  
Sbjct: 112 GVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVP 168

Query: 47  PETWMSFPVTHKCDVRSFGMLLFEILGRRR-----------MRTCQKARSGFPSGFKWVW 95
           PE W + P  +K D+ S G +L+E+   +            ++ CQ +    PS + +  
Sbjct: 169 PEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYEL 228

Query: 96  KKLEKGEFQ 104
           + L K  F+
Sbjct: 229 RSLIKQMFK 237

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	291
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.97
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.96
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.94
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.93
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.93
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.93
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.92
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.92
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.92
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.92
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.92
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.91
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.91
KOG0198	313	consensus MEKK and related serine/threonine protei	99.91
PHA02988	283	hypothetical protein; Provisional	99.91
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.91
KOG0578	550	consensus p21-activated serine/threonine protein k	99.91
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.91
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.91
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.91
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.91
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.91
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.91
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.91
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.9
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.9
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.9
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.9
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.9
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.9
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.9
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.9
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.9
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.9
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.9
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.9
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.9
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.9
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.9
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.9
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.9
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.9
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.9
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.9
PHA02882	294	putative serine/threonine kinase; Provisional	99.9
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.9
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.89
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.89
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.89
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.89
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.89
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.89
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.89
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.89
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.89
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.89
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.89
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.89
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.89
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.89
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.89
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.89
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.89
PTZ00283	496	serine/threonine protein kinase; Provisional	99.89
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.89
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.89
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.89
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.89
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.89
PHA03212	391	serine/threonine kinase US3; Provisional	99.89
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.89
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.89
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.89
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.89
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.89
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.89
PTZ00284	467	protein kinase; Provisional	99.89
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.89
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.89
PTZ00036	440	glycogen synthase kinase; Provisional	99.89
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.88
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.88
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.88
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.88
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.88
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.88
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.88
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.88
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.88
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.88
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.88
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.88
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.88
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.88
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.88
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.88
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.88
PHA03209	357	serine/threonine kinase US3; Provisional	99.88
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.88
PHA03211	461	serine/threonine kinase US3; Provisional	99.88
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.88
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.88
PTZ00267	478	NIMA-related protein kinase; Provisional	99.88
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.88
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.88
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.88
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.88
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.88
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.88
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.88
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.88
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.88
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.87
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.87
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.87
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.87
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.87
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.87
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.87
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.87
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.87
PLN00181	793	protein SPA1-RELATED; Provisional	99.87
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.87
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.87
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.87
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.87
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.87
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.87
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.87
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.87
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.87
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.87
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.87
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.87
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.87
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.87
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.87
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.87
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.87
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.87
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.87
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.87
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.87
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.87
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.87
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.87
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.87
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.87
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.87
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.87
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.87
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.87
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.87
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.87
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.87
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.87
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.87
PHA03207	392	serine/threonine kinase US3; Provisional	99.87
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.87
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.87
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.87
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.87
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.87
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.87
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.87
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.87
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.87
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.87
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.87
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.86
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.86
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.86
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.86
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.86
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.86
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.86
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.86
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.86
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.86
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.86
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.86
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.86
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.86
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.86
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.86
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.86
KOG0589	426	consensus Serine/threonine protein kinase [General	99.86
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.86
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.86
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.86
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.86
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.86
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.86
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.86
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.86
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.86
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.86
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.86
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.86
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.86
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.86
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.85
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.85
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.85
PHA03210	501	serine/threonine kinase US3; Provisional	99.85
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.85
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.85
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.85
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.85
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.85
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.85
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.85
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.85
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.85
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.85
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.85
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.85
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.85
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.85
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.85
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.85
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.85
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.85
KOG0584	632	consensus Serine/threonine protein kinase [General	99.85
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.85
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.85
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.85
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.85
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.85
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.85
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.85
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.85
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.84
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.84
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.84
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.84
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.84
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.84
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.84
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.84
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.84
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.84
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.84
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.84
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.84
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.84
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.84
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.84
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.84
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.84
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.84
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.84
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.84
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.84
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.84
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.84
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.84
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.84
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.84
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.84
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.84
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.84
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.84
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.84
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.84
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.84
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.83
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.83
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.83
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.83
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.83
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.83
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.83
KOG0605	550	consensus NDR and related serine/threonine kinases	99.83
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.83
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.83
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.83
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.83
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.83
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.83
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.83
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.83
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.83
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.83
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.83
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.83
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.83
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.83
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.83
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.83
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.83
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.83
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.83
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.83
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.83
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.82
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.82
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.82
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.82
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.82
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.82
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.82
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.82
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.82
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.82
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.82
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.82
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.82
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.82
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.82
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.82
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.82
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.82
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.82
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.82
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.82
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.82
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.82
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.82
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.82
PLN00009	294	cyclin-dependent kinase A; Provisional	99.82
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.82
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.82
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.82
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.82
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.82
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.82
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.82
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.82
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.81
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.81
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.81
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.81
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.81
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.81
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.81
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.81
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.81
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.81
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.81
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.81
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.81
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.81
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.81
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.81
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.81
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.81
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.81
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.8
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.8
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.8
KOG3653	534	consensus Transforming growth factor beta/activin	99.8
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.8
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.8
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.8
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.8
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.8
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.8
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.8
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.8
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.79
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.79
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.79
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.79
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.79
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.79
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.78
KOG0610	459	consensus Putative serine/threonine protein kinase	99.78
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.78
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.78
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.78
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.77
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.77
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.77
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.76
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.76
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.74
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.74
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.71
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.71
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.71
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.69
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.69
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.68
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.68
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.67
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.66
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.66
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.66
KOG0586	596	consensus Serine/threonine protein kinase [General	99.64
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.64
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.64
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.63
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.63
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.63
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.61
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.6
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.6
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.6
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.6
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.52
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.52
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.47
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.45
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.45
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.41
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.39
KOG1152	772	consensus Signal transduction serine/threonine kin	99.36
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.34
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.33
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.33
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.27
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.15
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.14
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.02
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.0
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.92
KOG1187	361	consensus Serine/threonine protein kinase [Signal	98.65
PRK12274	218	serine/threonine protein kinase; Provisional	98.65
PRK09188	365	serine/threonine protein kinase; Provisional	98.61
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.57
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.46
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	98.45
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.38
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.34
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	98.33
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.31
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.13
PRK10345	210	hypothetical protein; Provisional	98.1
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.08
smart00090	237	RIO RIO-like kinase.	97.98
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.91
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.89
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.86
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.81
COG4248	637	Uncharacterized protein with protein kinase and he	97.79
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.76
PRK14879	211	serine/threonine protein kinase; Provisional	97.63
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	97.61
PRK09605	535	bifunctional UGMP family protein/serine/threonine	97.57
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.5
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.35
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	96.9
KOG1243	690	consensus Protein kinase [General function predict	96.89
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	96.84
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	96.72
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	96.45
KOG3087	229	consensus Serine/threonine protein kinase [General	96.14
KOG3653	534	consensus Transforming growth factor beta/activin	96.1
PLN03224	507	probable serine/threonine protein kinase; Provisio	95.9
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	95.55
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	95.33
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	95.24
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	94.64
PRK09902	216	hypothetical protein; Provisional	94.45
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	94.33
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	93.82
PHA02882	294	putative serine/threonine kinase; Provisional	93.44
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	93.38
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	93.26
PTZ00284	467	protein kinase; Provisional	92.17
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	91.99
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	91.93
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	91.68
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	91.27
COG0478	304	RIO-like serine/threonine protein kinase fused to	90.58
PRK09188	365	serine/threonine protein kinase; Provisional	90.54
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	90.16
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	90.15
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	90.08
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	89.86
KOG0201	467	consensus Serine/threonine protein kinase [Signal	89.8
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	89.27
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	89.24
KOG0595	429	consensus Serine/threonine-protein kinase involved	89.11
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	89.0
PTZ00036	440	glycogen synthase kinase; Provisional	88.98
PTZ00283	496	serine/threonine protein kinase; Provisional	88.23
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	88.23
PHA03210	501	serine/threonine kinase US3; Provisional	88.01
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	87.85
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	87.72
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	87.63
PHA03211	461	serine/threonine kinase US3; Provisional	87.37
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	87.22
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	86.93
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	86.93
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	86.62
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	86.6
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	86.3
PLN00034	353	mitogen-activated protein kinase kinase; Provision	86.28
PHA03209	357	serine/threonine kinase US3; Provisional	86.17
KOG0605	550	consensus NDR and related serine/threonine kinases	86.1
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	86.07
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	86.06
PHA03111	444	Ser/Thr kinase; Provisional	85.85
PTZ00263	329	protein kinase A catalytic subunit; Provisional	85.62
KOG0192	362	consensus Tyrosine kinase specific for activated (	85.53
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	85.36
KOG0576	829	consensus Mitogen-activated protein kinase kinase	85.33

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.4e-32  Score=241.06  Aligned_cols=152  Identities=34%  Similarity=0.501  Sum_probs=134.1

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCC
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~   55 (291)
                      |++|+.++|+||+|||+.|.++||||||||+|||||+++.                         |.+|++||++..+..
T Consensus       176 R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~l  255 (361)
T KOG1187|consen  176 RLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKL  255 (361)
T ss_pred             HHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCc
Confidence            6899999999999999999889999999999999996643                         557999999999999


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhccc-ccchH-HHHHHHHHHHHHcccc
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGM-EKNNK-EKAERMALVALWRVQY  133 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~~cl~~  133 (291)
                      +.|+||||||++++|++||+.+.+...+. ...++..|..+.+.++.+.+++|+.+. ..... ++..++..++.+|++.
T Consensus       256 t~KsDVySFGVvllElitgr~~~d~~~~~-~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~  334 (361)
T KOG1187|consen  256 TEKSDVYSFGVVLLELITGRKAVDQSRPR-GELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRP  334 (361)
T ss_pred             CcccccccchHHHHHHHhCCcccCCCCCc-ccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCc
Confidence            99999999999999999999888765522 445589999999999999999999876 44443 7889999999999999


Q ss_pred             CCCCCCCCCccchhhhhhcccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      +|..||+|.||  +++|+.+..
T Consensus       335 ~~~~RP~m~~V--v~~L~~~~~  354 (361)
T KOG1187|consen  335 DPKERPTMSQV--VKELEGILS  354 (361)
T ss_pred             CCCcCcCHHHH--HHHHHhhcc
Confidence            99999999999  999966544

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.96  E-value=2.3e-29  Score=220.89  Aligned_cols=137  Identities=27%  Similarity=0.262  Sum_probs=110.8

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCC-eEeecCCCCcEEEccCC-C------------------------CCccccCcccc--C
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQQ-IIHYNIKPENILLDVKF-W------------------------TPGYAAPETWM--S   52 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~~-ivH~Dlkp~NIll~~~~-~------------------------t~~y~aPE~~~--~   52 (291)
                      +++|+.|||+||+|||+   .+ ||||||||+|||++.+. .                        |+.|||||++.  .
T Consensus       144 ~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~  220 (362)
T KOG0192|consen  144 RLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEK  220 (362)
T ss_pred             HHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCC
Confidence            47899999999999999   66 99999999999999875 2                        77899999999  5


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..|+.|+|||||||++|||+||+.||......       .-+......+         .....+..+...+..++.+||+
T Consensus       221 ~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-------~~~~~v~~~~---------~Rp~~p~~~~~~l~~l~~~CW~  284 (362)
T KOG0192|consen  221 SPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-------QVASAVVVGG---------LRPPIPKECPPHLSSLMERCWL  284 (362)
T ss_pred             CcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhcC---------CCCCCCccCCHHHHHHHHHhCC
Confidence            69999999999999999999999999866531       1111111111         1222233477899999999999


Q ss_pred             cCCCCCCCCCccchhhhhhccccccc
Q 022858          133 YKPEAMPSMTVRPAKFMLHGSLASML  158 (291)
Q Consensus       133 ~~p~~RPs~~~v~~~~~L~~~~~~~~  158 (291)
                      .||.+||++.++  +..|+.+.....
T Consensus       285 ~dp~~RP~f~ei--~~~l~~~~~~~~  308 (362)
T KOG0192|consen  285 VDPSRRPSFLEI--VSRLESIMSHIS  308 (362)
T ss_pred             CCCCcCCCHHHH--HHHHHHHHHhhc
Confidence            999999999999  999988766443

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.94  E-value=5.3e-28  Score=204.50  Aligned_cols=128  Identities=23%  Similarity=0.273  Sum_probs=101.6

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCccccc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      +|+.+|++||.|||+.  ++||||||||+|||++..+.                      |..|||||.+.+..|+.++|
T Consensus       182 ~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sD  259 (364)
T KOG0581|consen  182 KIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSD  259 (364)
T ss_pred             HHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccc
Confidence            6899999999999963  99999999999999997764                      88999999999999999999


Q ss_pred             eechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchH-HHHHHHHHHHHHccccCCCCCC
Q 022858           61 VRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNK-EKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        61 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      |||||++++|+.+|+-|+.....  ......+.+.         .+++.. ....+. .+..++..++..|+++||.+||
T Consensus       260 IWSLGLsllE~a~GrfP~~~~~~--~~~~~~~Ll~---------~Iv~~p-pP~lP~~~fS~ef~~FV~~CL~Kdp~~R~  327 (364)
T KOG0581|consen  260 IWSLGLSLLELAIGRFPYPPPNP--PYLDIFELLC---------AIVDEP-PPRLPEGEFSPEFRSFVSCCLRKDPSERP  327 (364)
T ss_pred             eecccHHHHHHhhCCCCCCCcCC--CCCCHHHHHH---------HHhcCC-CCCCCcccCCHHHHHHHHHHhcCCcccCC
Confidence            99999999999999999876521  2222222211         111111 111222 4778899999999999999999


Q ss_pred             CCCcc
Q 022858          140 SMTVR  144 (291)
Q Consensus       140 s~~~v  144 (291)
                      ++.|+
T Consensus       328 s~~qL  332 (364)
T KOG0581|consen  328 SAKQL  332 (364)
T ss_pred             CHHHH
Confidence            99988

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=2.2e-27  Score=209.10  Aligned_cols=132  Identities=23%  Similarity=0.237  Sum_probs=111.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|||+||+||++   +++|||||..+|||++++..                         ++.|.|||.+..+.++
T Consensus       306 l~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS  382 (468)
T KOG0197|consen  306 LDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFS  382 (468)
T ss_pred             HHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcc
Confidence            6799999999999999   99999999999999997653                         7789999999999999


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .|||||||||+|||++| |+.|+......        .+.         +.++.....+.+..|+..+.++|..||+.+|
T Consensus       383 ~kSDVWSFGVlL~E~fT~G~~py~~msn~--------ev~---------~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P  445 (468)
T KOG0197|consen  383 SKSDVWSFGVLLWELFTYGRVPYPGMSNE--------EVL---------ELLERGYRLPRPEGCPDEVYELMKSCWHEDP  445 (468)
T ss_pred             cccceeehhhhHHHHhccCCCCCCCCCHH--------HHH---------HHHhccCcCCCCCCCCHHHHHHHHHHhhCCc
Confidence            99999999999999997 77777655432        223         3344445556677889999999999999999


Q ss_pred             CCCCCCCccchhhhhhcccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ++|||+..+  ...|+....
T Consensus       446 ~~RPtF~~L--~~~l~~~~~  463 (468)
T KOG0197|consen  446 EDRPTFETL--REVLEDFFT  463 (468)
T ss_pred             ccCCCHHHH--HHHHHHhhh
Confidence            999999988  777766543

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.93  E-value=7.8e-26  Score=184.86  Aligned_cols=134  Identities=21%  Similarity=0.283  Sum_probs=110.4

Q ss_pred             ChhHHHHHHHHHHHHhcCCCC-CeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCC
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQ-QIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~-~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~   55 (291)
                      +++++.|++.||..+|+..+. -|+||||||.||+|+.++.                        ||.||+||.+.+..|
T Consensus       126 Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y  205 (375)
T KOG0591|consen  126 VWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGY  205 (375)
T ss_pred             HHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCC
Confidence            478999999999999984422 3999999999999998765                        999999999999999


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.||||||+||++|||+.-++||.+..        ...+.+.+..++...+.+        ......+.+|+..|+..||
T Consensus       206 ~~kSDiWslGCllyEMcaL~~PF~g~n--------~~~L~~KI~qgd~~~~p~--------~~YS~~l~~li~~ci~vd~  269 (375)
T KOG0591|consen  206 NFKSDIWSLGCLLYEMCALQSPFYGDN--------LLSLCKKIEQGDYPPLPD--------EHYSTDLRELINMCIAVDP  269 (375)
T ss_pred             CcchhHHHHHHHHHHHHhcCCCccccc--------HHHHHHHHHcCCCCCCcH--------HHhhhHHHHHHHHHccCCc
Confidence            999999999999999999999998663        233566777776554432        3456788899999999999


Q ss_pred             CCCCCCCccchhhhhhc
Q 022858          136 EAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~  152 (291)
                      +.||+...+  +..+..
T Consensus       270 ~~RP~t~~~--v~di~~  284 (375)
T KOG0591|consen  270 EQRPDTVPY--VQDIQS  284 (375)
T ss_pred             ccCCCcchH--HHHHHH
Confidence            999997666  555544

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.93  E-value=8.3e-27  Score=206.27  Aligned_cols=132  Identities=23%  Similarity=0.210  Sum_probs=107.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.+.++||.||.|||.   +.|||||||+-||||..+..                       |..|||||++.+.+.+.|
T Consensus       215 v~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEK  291 (904)
T KOG4721|consen  215 VDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEK  291 (904)
T ss_pred             HHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccc
Confidence            4678999999999999   99999999999999986532                       889999999999999999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +||||||||||||+||..||.+-....                .+..+=...+..+.+..|+..+.-|+..||+..|.+|
T Consensus       292 VDIwSfGVVLWEmLT~EiPYkdVdssA----------------IIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNR  355 (904)
T KOG4721|consen  292 VDIWSFGVVLWEMLTGEIPYKDVDSSA----------------IIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNR  355 (904)
T ss_pred             cceehhHHHHHHHHhcCCCccccchhe----------------eEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCC
Confidence            999999999999999999987554320                0111111112345567788899999999999999999


Q ss_pred             CCCCccchhhhhhccc
Q 022858          139 PSMTVRPAKFMLHGSL  154 (291)
Q Consensus       139 Ps~~~v~~~~~L~~~~  154 (291)
                      |++++|  +..|+-..
T Consensus       356 PSFrqi--l~HldIa~  369 (904)
T KOG4721|consen  356 PSFRQI--LLHLDIAS  369 (904)
T ss_pred             ccHHHH--HHHHhhcC
Confidence            999999  77776553

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.92  E-value=1.8e-26  Score=205.56  Aligned_cols=137  Identities=23%  Similarity=0.264  Sum_probs=108.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccC---
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMS---   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~---   52 (291)
                      +.|++|||+||.|||.   ++|||||||+.||+|.+++.                          ...|||||+++.   
T Consensus       491 idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~  567 (678)
T KOG0193|consen  491 IDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDD  567 (678)
T ss_pred             HHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhccc
Confidence            6899999999999999   99999999999999998643                          668999999974   


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      .+|+..+|||||||++|||+||..||.....+        .+.-++.+|.+..     .......++.+++.+|+..||.
T Consensus       568 nPfS~qSDVYaFGiV~YELltg~lPysi~~~d--------qIifmVGrG~l~p-----d~s~~~s~~pk~mk~Ll~~C~~  634 (678)
T KOG0193|consen  568 NPFSFQSDVYAFGIVWYELLTGELPYSIQNRD--------QIIFMVGRGYLMP-----DLSKIRSNCPKAMKRLLSDCWK  634 (678)
T ss_pred             CCCCcccchhhhhHHHHHHHhCcCCcCCCChh--------heEEEecccccCc-----cchhhhccCHHHHHHHHHHHHh
Confidence            47999999999999999999999999833322        1111222221110     1123345678899999999999


Q ss_pred             cCCCCCCCCCccchhhhhhccccc
Q 022858          133 YKPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       133 ~~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      .++++||.+.+|  +..|+.....
T Consensus       635 ~~~~eRP~F~~i--l~~l~~l~~~  656 (678)
T KOG0193|consen  635 FDREERPLFPQL--LSKLEELLPS  656 (678)
T ss_pred             cCcccCccHHHH--HHHHHHhhhc
Confidence            999999999999  9888877663

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.92  E-value=2.6e-26  Score=202.67  Aligned_cols=133  Identities=23%  Similarity=0.274  Sum_probs=103.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.||+.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||++.+..+
T Consensus       177 ~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  253 (338)
T cd05102         177 ICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVY  253 (338)
T ss_pred             HHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCC
Confidence            4678999999999999   99999999999999986542                          357999999998899


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||++ |..||......       .........+...         ..+......+.+++.+||+.|
T Consensus       254 ~~~sDiwslG~il~el~~~g~~pf~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~d  317 (338)
T cd05102         254 TTQSDVWSFGVLLWEIFSLGASPYPGVQIN-------EEFCQRLKDGTRM---------RAPENATPEIYRIMLACWQGD  317 (338)
T ss_pred             CcccCHHHHHHHHHHHHhCCCCCCCCCCcc-------HHHHHHHhcCCCC---------CCCCCCCHHHHHHHHHHccCC
Confidence            999999999999999997 99998654321       1112222222111         112233467889999999999


Q ss_pred             CCCCCCCCccchhhhhhcccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      |++||++.++  ++.|+....
T Consensus       318 p~~RPs~~el--~~~l~~~~~  336 (338)
T cd05102         318 PKERPTFSAL--VEILGDLLQ  336 (338)
T ss_pred             hhhCcCHHHH--HHHHHHHHh
Confidence            9999999999  999987643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.92  E-value=1.9e-25  Score=222.24  Aligned_cols=151  Identities=25%  Similarity=0.291  Sum_probs=120.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------CCccccCccccCCCCcccccee
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------TPGYAAPETWMSFPVTHKCDVR   62 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------t~~y~aPE~~~~~~~~~~~Dv~   62 (291)
                      .+|+.|+|.||+|||..|.++|+||||||+||+++.+..                   ++.|||||++.+..++.++|||
T Consensus       783 ~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~  862 (968)
T PLN00113        783 RKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIY  862 (968)
T ss_pred             HHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccccccCcccccCCCCCcccchh
Confidence            578999999999999766689999999999999986643                   4789999999998999999999


Q ss_pred             chhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhccc--ccchHHHHHHHHHHHHHccccCCCCCCC
Q 022858           63 SFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGM--EKNNKEKAERMALVALWRVQYKPEAMPS  140 (291)
Q Consensus        63 s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~RPs  140 (291)
                      ||||++|||+||+.|++....  .......|.............+++...  .....++..++.+++.+||+.+|++||+
T Consensus       863 S~Gvvl~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt  940 (968)
T PLN00113        863 GFGLILIELLTGKSPADAEFG--VHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPC  940 (968)
T ss_pred             hHHHHHHHHHhCCCCCCcccC--CCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcC
Confidence            999999999999999854332  234456666554444444444444332  1234566778899999999999999999


Q ss_pred             CCccchhhhhhccccc
Q 022858          141 MTVRPAKFMLHGSLAS  156 (291)
Q Consensus       141 ~~~v~~~~~L~~~~~~  156 (291)
                      |.||  ++.|++....
T Consensus       941 ~~ev--l~~L~~~~~~  954 (968)
T PLN00113        941 ANDV--LKTLESASRS  954 (968)
T ss_pred             HHHH--HHHHHHhhcc
Confidence            9999  9999887654

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.4e-25  Score=193.51  Aligned_cols=142  Identities=19%  Similarity=0.198  Sum_probs=106.3

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccC--
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMS--   52 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~--   52 (291)
                      .|++++++||.|||.   ++.||||||+.||||+.++.                            ++.|||||++..  
T Consensus       130 ~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~  206 (516)
T KOG0582|consen  130 TILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQL  206 (516)
T ss_pred             HHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcc
Confidence            578999999999999   99999999999999998765                            889999999654  


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..|+.|+|||||||+..||.+|..||....+...       +...+ .+..+.........+........+.+++..|++
T Consensus       207 ~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv-------Ll~tL-qn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~  278 (516)
T KOG0582|consen  207 HGYDFKADIWSFGITACELAHGHAPFSKYPPMKV-------LLLTL-QNDPPTLLTSGLDKDEDKKFSKSFREMIALCLV  278 (516)
T ss_pred             cCccchhhhhhhhHHHHHHhcCCCCcccCChHHH-------HHHHh-cCCCCCcccccCChHHhhhhcHHHHHHHHHHhh
Confidence            4799999999999999999999999987665311       11111 111111111111122334455688999999999


Q ss_pred             cCCCCCCCCCccchhhhhhcccc
Q 022858          133 YKPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       133 ~~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      +||++|||++++.+...+.....
T Consensus       279 kDP~kRptAskLlkh~FFk~~k~  301 (516)
T KOG0582|consen  279 KDPSKRPTASKLLKHAFFKKAKS  301 (516)
T ss_pred             cCcccCCCHHHHhccHHHhhccc
Confidence            99999999999955555555543

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.92  E-value=1.2e-25  Score=193.18  Aligned_cols=129  Identities=19%  Similarity=0.212  Sum_probs=103.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.++.                          ++.|+|||.+.+..+
T Consensus       127 ~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  203 (283)
T cd05048         127 LHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKF  203 (283)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcC
Confidence            4689999999999999   99999999999999986542                          356999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||++ |..||......        .+...+..+..         ...+..++..+.+|+.+||+.+
T Consensus       204 ~~~sDv~slG~il~el~~~g~~p~~~~~~~--------~~~~~i~~~~~---------~~~~~~~~~~~~~l~~~c~~~~  266 (283)
T cd05048         204 TTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--------EVIEMIRSRQL---------LPCPEDCPARVYALMIECWNEI  266 (283)
T ss_pred             chhhhHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHcCCc---------CCCcccCCHHHHHHHHHHccCC
Confidence            999999999999999998 99998654321        12222222211         1223455688999999999999


Q ss_pred             CCCCCCCCccchhhhhhc
Q 022858          135 PEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~  152 (291)
                      |++||++.+|  ++.|+.
T Consensus       267 p~~Rp~~~~i--~~~l~~  282 (283)
T cd05048         267 PARRPRFKDI--HTRLRS  282 (283)
T ss_pred             hhhCcCHHHH--HHHHhc
Confidence            9999999999  888864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.91  E-value=1.9e-25  Score=195.42  Aligned_cols=135  Identities=16%  Similarity=0.178  Sum_probs=104.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.||+.||+|||+   .+|+||||||+|||++.+..                          +..|+|||++.+..+
T Consensus       112 ~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~  188 (316)
T cd05108         112 LNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIY  188 (316)
T ss_pred             HHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCC
Confidence            5788999999999999   99999999999999987543                          346999999998899


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++||+++ |..|+......        ........+..         .+.+..+...+.+++.+||+.+
T Consensus       189 ~~~~Di~slGv~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~  251 (316)
T cd05108         189 THQSDVWSYGVTVWELMTFGSKPYDGIPAS--------EISSILEKGER---------LPQPPICTIDVYMIMVKCWMID  251 (316)
T ss_pred             CchhhhHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHhCCCC---------CCCCCCCCHHHHHHHHHHccCC
Confidence            999999999999999997 99888643221        11112211111         1111223457889999999999


Q ss_pred             CCCCCCCCccchhhhhhccccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLASML  158 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~~~  158 (291)
                      |++||++.++  +..|......+.
T Consensus       252 p~~Rps~~~l--~~~l~~~~~~~~  273 (316)
T cd05108         252 ADSRPKFREL--IIEFSKMARDPQ  273 (316)
T ss_pred             hhhCcCHHHH--HHHHHHHHcCCc
Confidence            9999999999  888887765443

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.91  E-value=1.2e-25  Score=207.64  Aligned_cols=134  Identities=19%  Similarity=0.222  Sum_probs=116.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      |.||.|||.||+||-+   +.+|||||-.+|+|+.++..                          .+.|||||.+..+++
T Consensus       606 L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kF  682 (774)
T KOG1026|consen  606 LHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKF  682 (774)
T ss_pred             HHHHHHHHHHHHHHHh---CcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcc
Confidence            6899999999999999   99999999999999997754                          789999999999999


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      |++||||||||+|||+++ |+.|+.+..+.        .+...+.++++         .+.+..|+.++.+||..||+.+
T Consensus       683 TteSDVWs~GVvLWEIFsyG~QPy~glSn~--------EVIe~i~~g~l---------L~~Pe~CP~~vY~LM~~CW~~~  745 (774)
T KOG1026|consen  683 TTESDVWSFGVVLWEIFSYGKQPYYGLSNQ--------EVIECIRAGQL---------LSCPENCPTEVYSLMLECWNEN  745 (774)
T ss_pred             cchhhhhhhhhhhhhhhccccCcccccchH--------HHHHHHHcCCc---------ccCCCCCCHHHHHHHHHHhhcC
Confidence            999999999999999995 88898877653        35555555544         3456778999999999999999


Q ss_pred             CCCCCCCCccchhhhhhcccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      |++||+++||  ...|+......
T Consensus       746 P~~RPsF~eI--~~~L~~~~~~s  766 (774)
T KOG1026|consen  746 PKRRPSFKEI--HSRLQAWAQAS  766 (774)
T ss_pred             cccCCCHHHH--HHHHHHHHhcC
Confidence            9999999999  99998876543

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.91  E-value=2.5e-25  Score=190.31  Aligned_cols=125  Identities=22%  Similarity=0.223  Sum_probs=96.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc-CCC---------------------------CCccccCccccCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV-KFW---------------------------TPGYAAPETWMSF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~-~~~---------------------------t~~y~aPE~~~~~   53 (291)
                      .++++||++||+|||+   ++||||||||+|||++. ++.                           |+.|||||++..+
T Consensus       120 ~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g  196 (313)
T KOG0198|consen  120 RRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNG  196 (313)
T ss_pred             HHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCC
Confidence            4678999999999999   99999999999999988 322                           8899999999964


Q ss_pred             -CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           54 -PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        54 -~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                       ....++||||+||++.||+||++|+....      ....+..........+         ..+...+....+++.+|++
T Consensus       197 ~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~------~~~~~~~~ig~~~~~P---------~ip~~ls~~a~~Fl~~C~~  261 (313)
T KOG0198|consen  197 EVARRESDIWSLGCTVVEMLTGKPPWSEFF------EEAEALLLIGREDSLP---------EIPDSLSDEAKDFLRKCFK  261 (313)
T ss_pred             CcCCccchhhhcCCEEEeccCCCCcchhhc------chHHHHHHHhccCCCC---------CCCcccCHHHHHHHHHHhh
Confidence             33358999999999999999999987531      1122233333222222         2233345677889999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .+|++|||+.++
T Consensus       262 ~~p~~Rpta~eL  273 (313)
T KOG0198|consen  262 RDPEKRPTAEEL  273 (313)
T ss_pred             cCcccCcCHHHH
Confidence            999999999999

>PHA02988 hypothetical protein; Provisional

Probab=99.91  E-value=3.3e-25  Score=191.00  Aligned_cols=133  Identities=14%  Similarity=0.049  Sum_probs=102.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccC--CCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMS--FPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~--~~~~~~   58 (291)
                      ++++.|++.||.|||+.  .+++||||||+|||++.++.                     +..|+|||.+.+  ..++.+
T Consensus       125 ~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k  202 (283)
T PHA02988        125 LDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIK  202 (283)
T ss_pred             HHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccch
Confidence            57889999999999972  47889999999999997643                     568999999876  689999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|||||||++|||++|+.||......        .+...+.....        ....+..++..+.+++.+||+.||++|
T Consensus       203 ~Di~SlGvil~el~~g~~Pf~~~~~~--------~~~~~i~~~~~--------~~~~~~~~~~~l~~li~~cl~~dp~~R  266 (283)
T PHA02988        203 DDIYSLGVVLWEIFTGKIPFENLTTK--------EIYDLIINKNN--------SLKLPLDCPLEIKCIVEACTSHDSIKR  266 (283)
T ss_pred             hhhhHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhcCC--------CCCCCCcCcHHHHHHHHHHhcCCcccC
Confidence            99999999999999999999754321        11111111110        011122345678999999999999999


Q ss_pred             CCCCccchhhhhhccc
Q 022858          139 PSMTVRPAKFMLHGSL  154 (291)
Q Consensus       139 Ps~~~v~~~~~L~~~~  154 (291)
                      |++.++  +..|+...
T Consensus       267 ps~~el--l~~l~~~~  280 (283)
T PHA02988        267 PNIKEI--LYNLSLYK  280 (283)
T ss_pred             cCHHHH--HHHHHHHH
Confidence            999999  98887653

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.91  E-value=5.7e-25  Score=176.75  Aligned_cols=136  Identities=22%  Similarity=0.216  Sum_probs=103.9

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------------CCccccC
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------------TPGYAAP   47 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------------t~~y~aP   47 (291)
                      +|.|+.+|++||++||+.. .++.||||||.|||+..++.                                 |..|.||
T Consensus       129 iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAP  207 (302)
T KOG2345|consen  129 ILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAP  207 (302)
T ss_pred             HHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCc
Confidence            3689999999999999932 45999999999999987543                                 9999999


Q ss_pred             cccc---CCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHH
Q 022858           48 ETWM---SFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMA  124 (291)
Q Consensus        48 E~~~---~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (291)
                      |.+.   +...+.++|||||||+||+|+.|..||+......+...+.-              ..+...-+.....+..+.
T Consensus       208 ELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv--------------~n~q~s~P~~~~yse~l~  273 (302)
T KOG2345|consen  208 ELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAV--------------QNAQISIPNSSRYSEALH  273 (302)
T ss_pred             hheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEee--------------eccccccCCCCCccHHHH
Confidence            9886   34788999999999999999999999976554222111110              011111112222568899


Q ss_pred             HHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          125 LVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       125 ~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      +++.+|++.||.+||++.++  +..++..
T Consensus       274 ~lik~mlqvdP~qRP~i~~l--l~~~d~L  300 (302)
T KOG2345|consen  274 QLIKSMLQVDPNQRPTIPEL--LSKLDDL  300 (302)
T ss_pred             HHHHHHhcCCcccCCCHHHH--HHHHHhh
Confidence            99999999999999999999  7777654

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=6.1e-25  Score=194.69  Aligned_cols=124  Identities=23%  Similarity=0.226  Sum_probs=100.6

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCccc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      .|+.++++||+|||.   .+|+|||||.+|||++.++.                        |+.|||||++....|.+|
T Consensus       373 ~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~K  449 (550)
T KOG0578|consen  373 AICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPK  449 (550)
T ss_pred             HHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCcc
Confidence            578999999999999   99999999999999997754                        999999999999999999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +||||||++++||+-|++||-...+-       ..++-.... ...+       ..........+.++..+||+.|+++|
T Consensus       450 VDIWSLGIMaIEMveGEPPYlnE~Pl-------rAlyLIa~n-g~P~-------lk~~~klS~~~kdFL~~cL~~dv~~R  514 (550)
T KOG0578|consen  450 VDIWSLGIMAIEMVEGEPPYLNENPL-------RALYLIATN-GTPK-------LKNPEKLSPELKDFLDRCLVVDVEQR  514 (550)
T ss_pred             ccchhhhhHHHHHhcCCCCccCCChH-------HHHHHHhhc-CCCC-------cCCccccCHHHHHHHHHHhhcchhcC
Confidence            99999999999999999999765432       111111111 1111       22234455788899999999999999


Q ss_pred             CCCCcc
Q 022858          139 PSMTVR  144 (291)
Q Consensus       139 Ps~~~v  144 (291)
                      |++.|+
T Consensus       515 asA~eL  520 (550)
T KOG0578|consen  515 ASAKEL  520 (550)
T ss_pred             CCHHHH
Confidence            999999

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.91  E-value=4.1e-25  Score=190.99  Aligned_cols=133  Identities=22%  Similarity=0.255  Sum_probs=104.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++++.|++.||+|||+   ++|+||||||+||+++.++.                          +..|+|||++.+..+
T Consensus       126 ~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  202 (291)
T cd05094         126 LHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKF  202 (291)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCC
Confidence            5789999999999999   99999999999999986643                          346999999998889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||+| |..||......        ........+....         ....++..+.+++.+||+.+
T Consensus       203 ~~~~Di~slG~il~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~  265 (291)
T cd05094         203 TTESDVWSFGVILWEIFTYGKQPWFQLSNT--------EVIECITQGRVLE---------RPRVCPKEVYDIMLGCWQRE  265 (291)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHhCCCCCC---------CCccCCHHHHHHHHHHcccC
Confidence            999999999999999998 99987554321        1112222222111         11223567889999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |++||++.++  +++|+.+...
T Consensus       266 P~~Rpt~~~v--~~~l~~~~~~  285 (291)
T cd05094         266 PQQRLNIKEI--YKILHALGKA  285 (291)
T ss_pred             hhhCcCHHHH--HHHHHHHHhh
Confidence            9999999999  9999888553

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=6.6e-25  Score=187.69  Aligned_cols=133  Identities=28%  Similarity=0.290  Sum_probs=103.6

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCC---
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFP---   54 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~---   54 (291)
                      ++.|++.|+.|||+   .+|+||||||+|||+..+-.                          |+.|.|||++.+..   
T Consensus       281 ~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~  357 (475)
T KOG0615|consen  281 LFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEY  357 (475)
T ss_pred             HHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeec
Confidence            67899999999999   99999999999999986621                          99999999998753   


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +..++|+||+||+||-+++|.+||.......   ++    .+.+..|.+...      .....+...+..+++.++|..|
T Consensus       358 ~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~---sl----~eQI~~G~y~f~------p~~w~~Iseea~dlI~~mL~Vd  424 (475)
T KOG0615|consen  358 YPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP---SL----KEQILKGRYAFG------PLQWDRISEEALDLINWMLVVD  424 (475)
T ss_pred             ccchheeeeccceEEEEeccCCCcccccCCc---cH----HHHHhcCccccc------ChhhhhhhHHHHHHHHHhhEeC
Confidence            3347899999999999999999998776542   12    223333333211      2334566788899999999999


Q ss_pred             CCCCCCCCccchhhhhhc
Q 022858          135 PEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~  152 (291)
                      |++|||+.|++...++..
T Consensus       425 P~~R~s~~eaL~hpW~~~  442 (475)
T KOG0615|consen  425 PENRPSADEALNHPWFKD  442 (475)
T ss_pred             cccCcCHHHHhcChhhhc
Confidence            999999999944455543

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.91  E-value=5.4e-25  Score=189.13  Aligned_cols=133  Identities=20%  Similarity=0.195  Sum_probs=102.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.||+.||+|||+   .+++||||||+|||++.++.                          +..|++||.+.+..+
T Consensus       112 ~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~  188 (279)
T cd05111         112 LNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRY  188 (279)
T ss_pred             HHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCc
Confidence            5689999999999999   99999999999999986543                          347999999988899


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++||+++ |..|+......        .....+..+...         ..+..+...+.+++.+|++.+
T Consensus       189 ~~~~Dv~slG~il~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~li~~c~~~~  251 (279)
T cd05111         189 THQSDVWSYGVTVWEMMSYGAEPYAGMRPH--------EVPDLLEKGERL---------AQPQICTIDVYMVMVKCWMID  251 (279)
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHCCCcC---------CCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999998 99888654321        111112222111         111123356788899999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |++||++.++  +..|....+.
T Consensus       252 p~~Rps~~el--~~~l~~~~~~  271 (279)
T cd05111         252 ENVRPTFKEL--ANEFTRMARD  271 (279)
T ss_pred             cccCcCHHHH--HHHHHHHHhC
Confidence            9999999999  9888876553

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.91  E-value=4e-25  Score=190.10  Aligned_cols=129  Identities=16%  Similarity=0.167  Sum_probs=100.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++++.|++.||+|||+   ++|+||||||+||+++.+..                          ++.|+|||++.+..+
T Consensus       127 ~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  203 (283)
T cd05091         127 VHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKF  203 (283)
T ss_pred             HHHHHHHHHHHHHHHH---cCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCC
Confidence            4688999999999999   99999999999999986532                          457999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..|+.....        ......+..+..         ...+..++..+.+++..|++.+
T Consensus       204 ~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~~~~~i~~~~~---------~~~~~~~~~~~~~li~~cl~~~  266 (283)
T cd05091         204 SIDSDIWSYGVVLWEVFSYGLQPYCGYSN--------QDVIEMIRNRQV---------LPCPDDCPAWVYTLMLECWNEF  266 (283)
T ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHcCCc---------CCCCCCCCHHHHHHHHHHhCCC
Confidence            999999999999999998 7777754321        111222222211         1122345577889999999999


Q ss_pred             CCCCCCCCccchhhhhhc
Q 022858          135 PEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~  152 (291)
                      |++||++++|  ++.|+.
T Consensus       267 p~~RP~~~~i--~~~l~~  282 (283)
T cd05091         267 PSRRPRFKDI--HSRLRT  282 (283)
T ss_pred             cccCCCHHHH--HHHhhC
Confidence            9999999999  887753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.91  E-value=5.9e-25  Score=189.13  Aligned_cols=146  Identities=18%  Similarity=0.164  Sum_probs=104.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.+..                           +..|+|||.+.+..
T Consensus       110 ~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~  186 (283)
T cd05080         110 LLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENK  186 (283)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccC
Confidence            5688999999999999   99999999999999986542                           23489999998888


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||||+++|||++|..|+......  ................+.+..+.....+.+...+..+.+++..||+.+
T Consensus       187 ~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  264 (283)
T cd05080         187 FSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETE  264 (283)
T ss_pred             CCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccC
Confidence            999999999999999999999987543321  000000000000001111112221112223345578999999999999


Q ss_pred             CCCCCCCCccchhhhhhccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~  154 (291)
                      |++||++.++  +..|+...
T Consensus       265 p~~Rps~~~i--~~~l~~~~  282 (283)
T cd05080         265 AKFRPTFRSL--IPILKEMH  282 (283)
T ss_pred             hhhCCCHHHH--HHHHHHhh
Confidence            9999999999  99887653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.91  E-value=8.4e-25  Score=192.76  Aligned_cols=120  Identities=22%  Similarity=0.258  Sum_probs=97.8

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------------------CCcccc
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------------------TPGYAA   46 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------------------t~~y~a   46 (291)
                      ++.+|+.||+|||+   ++||||||||+|||||.|+.                                     |..|.+
T Consensus       179 YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVS  255 (604)
T KOG0592|consen  179 YAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVS  255 (604)
T ss_pred             HHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccC
Confidence            67899999999999   99999999999999998864                                     778999


Q ss_pred             CccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHH
Q 022858           47 PETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALV  126 (291)
Q Consensus        47 PE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  126 (291)
                      ||++.++..+..+|+|+|||+||+|+.|++||.+....    .    +.+.+..-          .-..+...+..+.+|
T Consensus       256 PElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney----l----iFqkI~~l----------~y~fp~~fp~~a~dL  317 (604)
T KOG0592|consen  256 PELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY----L----IFQKIQAL----------DYEFPEGFPEDARDL  317 (604)
T ss_pred             HHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH----H----HHHHHHHh----------cccCCCCCCHHHHHH
Confidence            99999999999999999999999999999999876532    1    11222110          011222334677888


Q ss_pred             HHHccccCCCCCCCCCcc
Q 022858          127 ALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       127 ~~~cl~~~p~~RPs~~~v  144 (291)
                      +.+.|..||.+|++..+|
T Consensus       318 v~KLLv~dp~~Rlt~~qI  335 (604)
T KOG0592|consen  318 IKKLLVRDPSDRLTSQQI  335 (604)
T ss_pred             HHHHHccCccccccHHHH
Confidence            899999999999999888

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=7.5e-25  Score=188.69  Aligned_cols=129  Identities=22%  Similarity=0.175  Sum_probs=103.7

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcccc
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      |++++..||.|||+   .+.+|||||+.|||+..++.                        |+.|||||++....|+.|+
T Consensus       116 ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KA  192 (467)
T KOG0201|consen  116 ILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKA  192 (467)
T ss_pred             ehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhccccccchh
Confidence            67899999999999   99999999999999987743                        9999999999988999999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      ||||||++.+||.+|.+|+....+..                 +.-++...........+...+.+++..|+.+||+.||
T Consensus       193 DIWSLGITaiEla~GePP~s~~hPmr-----------------vlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~Rp  255 (467)
T KOG0201|consen  193 DIWSLGITAIELAKGEPPHSKLHPMR-----------------VLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRP  255 (467)
T ss_pred             hhhhhhHHHHHHhcCCCCCcccCcce-----------------EEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCc
Confidence            99999999999999999998776531                 1111111111112225567789999999999999999


Q ss_pred             CCCccchhhhhhc
Q 022858          140 SMTVRPAKFMLHG  152 (291)
Q Consensus       140 s~~~v~~~~~L~~  152 (291)
                      ++.++.+.+.+..
T Consensus       256 sA~~LLKh~FIk~  268 (467)
T KOG0201|consen  256 SAKELLKHKFIKR  268 (467)
T ss_pred             CHHHHhhhHHHHh
Confidence            9999955555544

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.90  E-value=7.8e-25  Score=193.22  Aligned_cols=133  Identities=23%  Similarity=0.267  Sum_probs=103.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++++.||+.||+|||+   .+|+||||||+|||++.++.                          +..|+|||++.+..+
T Consensus       176 ~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  252 (337)
T cd05054         176 ISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVY  252 (337)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCC
Confidence            4688999999999999   99999999999999996542                          346999999999999


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||++ |..||......       +........+...         ..+......+.+++.+|++.+
T Consensus       253 ~~~~Di~SlGv~l~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~cl~~~  316 (337)
T cd05054         253 TTQSDVWSFGVLLWEIFSLGASPYPGVQID-------EEFCRRLKEGTRM---------RAPEYATPEIYSIMLDCWHNN  316 (337)
T ss_pred             CccccHHHHHHHHHHHHHcCCCCCCCCCcc-------HHHHHHHhccCCC---------CCCccCCHHHHHHHHHHccCC
Confidence            999999999999999997 99998643221       1111222221111         111223467889999999999


Q ss_pred             CCCCCCCCccchhhhhhcccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      |++||++.++  ++.|+....
T Consensus       317 p~~RPs~~el--l~~l~~~~~  335 (337)
T cd05054         317 PEDRPTFSEL--VEILGDLLQ  335 (337)
T ss_pred             hhhCcCHHHH--HHHHHHHHh
Confidence            9999999999  999887643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.90  E-value=7.8e-25  Score=186.39  Aligned_cols=130  Identities=21%  Similarity=0.232  Sum_probs=101.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.++.                         +..|+|||.+.+..++
T Consensus       107 ~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  183 (263)
T cd05052         107 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS  183 (263)
T ss_pred             HHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCC
Confidence            5688999999999999   99999999999999986543                         3469999999888999


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++|||++ |..|+......        ........+.         ....+...+..+.+++.+|++.+|
T Consensus       184 ~~~Dv~slG~il~el~t~g~~p~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p  246 (263)
T cd05052         184 IKSDVWAFGVLLWEIATYGMSPYPGIDLS--------QVYELLEKGY---------RMERPEGCPPKVYELMRACWQWNP  246 (263)
T ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHCCC---------CCCCCCCCCHHHHHHHHHHccCCc
Confidence            99999999999999998 88887643211        1222222211         011122345678899999999999


Q ss_pred             CCCCCCCccchhhhhhcc
Q 022858          136 EAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~  153 (291)
                      ++||++.++  ++.|+..
T Consensus       247 ~~Rp~~~~l--~~~l~~~  262 (263)
T cd05052         247 SDRPSFAEI--HQAFETM  262 (263)
T ss_pred             ccCCCHHHH--HHHHHhh
Confidence            999999999  9888754

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.90  E-value=7.1e-25  Score=196.11  Aligned_cols=131  Identities=19%  Similarity=0.252  Sum_probs=100.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++|+.||+.||+|||+   ++|+||||||+|||++.+..                          +..|||||++.+..+
T Consensus       215 ~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  291 (374)
T cd05106         215 LRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVY  291 (374)
T ss_pred             HHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCC
Confidence            5689999999999999   99999999999999986532                          246999999988899


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||++ |+.||.......       ........+.  .       ...+...+..+.+++.+||+.|
T Consensus       292 ~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-------~~~~~~~~~~--~-------~~~~~~~~~~l~~li~~cl~~d  355 (374)
T cd05106         292 TVQSDVWSYGILLWEIFSLGKSPYPGILVNS-------KFYKMVKRGY--Q-------MSRPDFAPPEIYSIMKMCWNLE  355 (374)
T ss_pred             CccccHHHHHHHHHHHHhCCCCCCccccccH-------HHHHHHHccc--C-------ccCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999997 999986543210       0111111110  0       0011112367889999999999


Q ss_pred             CCCCCCCCccchhhhhhcc
Q 022858          135 PEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~  153 (291)
                      |++||++.++  ++.|+++
T Consensus       356 p~~RPs~~~l--~~~l~~~  372 (374)
T cd05106         356 PTERPTFSQI--SQLIQRQ  372 (374)
T ss_pred             hhhCcCHHHH--HHHHHHH
Confidence            9999999999  9998765

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.90  E-value=6.6e-25  Score=187.25  Aligned_cols=130  Identities=19%  Similarity=0.208  Sum_probs=102.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+++||||||+|||++.+..                         +..|+|||.+.+..++
T Consensus       110 ~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  186 (266)
T cd05064         110 MGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFS  186 (266)
T ss_pred             HHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCcc
Confidence            5789999999999999   99999999999999987643                         3579999999888999


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++|||||||++||+++ |..||......        ...+.+.++..         .+.+..++..+.+++..||+.+|
T Consensus       187 ~~~Di~slG~~l~ell~~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~~~li~~c~~~~p  249 (266)
T cd05064         187 SASDVWSFGIVMWEVMSYGERPYWDMSGQ--------DVIKAVEDGFR---------LPAPRNCPNLLHQLMLDCWQKER  249 (266)
T ss_pred             chhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHCCCC---------CCCCCCCCHHHHHHHHHHcCCCc
Confidence            99999999999999774 99998654321        11222222211         11233456778999999999999


Q ss_pred             CCCCCCCccchhhhhhcc
Q 022858          136 EAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~  153 (291)
                      ++||++.++  .+.|+..
T Consensus       250 ~~RP~~~~i--~~~l~~~  265 (266)
T cd05064         250 GERPRFSQI--HSILSKM  265 (266)
T ss_pred             hhCCCHHHH--HHHHHhh
Confidence            999999999  8877653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.90  E-value=9.4e-25  Score=195.42  Aligned_cols=131  Identities=20%  Similarity=0.224  Sum_probs=100.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++|+.||+.||+|||+   .+|+||||||+|||++.+..                          +..|+|||++.+..+
T Consensus       217 ~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  293 (375)
T cd05104         217 LSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVY  293 (375)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCC
Confidence            5688999999999999   99999999999999986532                          245999999998899


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||++ |..||......       ....+.+..+...         ..+...+..+.+++.+||+.|
T Consensus       294 ~~~sDi~slG~~l~ellt~g~~p~~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~d  357 (375)
T cd05104         294 TFESDVWSYGILLWEIFSLGSSPYPGMPVD-------SKFYKMIKEGYRM---------LSPECAPSEMYDIMKSCWDAD  357 (375)
T ss_pred             CCCCCHHHHHHHHHHHHhcCCCCCCCCCch-------HHHHHHHHhCccC---------CCCCCCCHHHHHHHHHHccCC
Confidence            999999999999999997 88887544321       1112222221110         011122357889999999999


Q ss_pred             CCCCCCCCccchhhhhhcc
Q 022858          135 PEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~  153 (291)
                      |++||++.+|  ++.|++.
T Consensus       358 P~~RPs~~ei--l~~l~~~  374 (375)
T cd05104         358 PLKRPTFKQI--VQLIEQQ  374 (375)
T ss_pred             hhHCcCHHHH--HHHHHhh
Confidence            9999999999  9988753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.90  E-value=8.1e-25  Score=189.70  Aligned_cols=133  Identities=22%  Similarity=0.247  Sum_probs=103.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.+..                       +..|+|||++.+..++.+
T Consensus       122 ~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  198 (297)
T cd05089         122 LQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTK  198 (297)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCch
Confidence            5688999999999999   99999999999999986532                       345999999988889999


Q ss_pred             cceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           59 CDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        59 ~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      +|||||||++|||++ |..||......        ........+.         ....+......+.+++.+|++.+|.+
T Consensus       199 ~DvwSlG~il~el~t~g~~pf~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~  261 (297)
T cd05089         199 SDVWSFGVLLWEIVSLGGTPYCGMTCA--------ELYEKLPQGY---------RMEKPRNCDDEVYELMRQCWRDRPYE  261 (297)
T ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHhcCC---------CCCCCCCCCHHHHHHHHHHcCCChhh
Confidence            999999999999997 99998644321        1111121111         01111234467889999999999999


Q ss_pred             CCCCCccchhhhhhccccc
Q 022858          138 MPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       138 RPs~~~v~~~~~L~~~~~~  156 (291)
                      ||++.++  ++.|+.....
T Consensus       262 Rp~~~~i--~~~l~~~~~~  278 (297)
T cd05089         262 RPPFAQI--SVQLSRMLEA  278 (297)
T ss_pred             CcCHHHH--HHHHHHHHHh
Confidence            9999999  9998877654

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.90  E-value=1.2e-24  Score=188.11  Aligned_cols=131  Identities=22%  Similarity=0.236  Sum_probs=102.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++++.|++.||+|||+   ++|+||||||+|||++.++.                          +..|+|||.+.+..+
T Consensus       135 ~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  211 (293)
T cd05053         135 VSFAYQVARGMEFLAS---KKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVY  211 (293)
T ss_pred             HHHHHHHHHHHHHHHH---CCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCc
Confidence            5689999999999999   99999999999999986543                          246999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++||+++ |..|+......        ........+..         ...+..+...+.+++.+|++.+
T Consensus       212 ~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~  274 (293)
T cd05053         212 THQSDVWSFGVLLWEIFTLGGSPYPGIPVE--------ELFKLLKEGYR---------MEKPQNCTQELYHLMRDCWHEV  274 (293)
T ss_pred             CcccceeehhhHHHHHhcCCCCCCCCCCHH--------HHHHHHHcCCc---------CCCCCCCCHHHHHHHHHHcccC
Confidence            999999999999999997 88887543321        12222222111         1122234567889999999999


Q ss_pred             CCCCCCCCccchhhhhhccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~  154 (291)
                      |++|||+.++  ++.|+.+.
T Consensus       275 p~~Rps~~ei--l~~l~~~~  292 (293)
T cd05053         275 PSQRPTFKQL--VEDLDRML  292 (293)
T ss_pred             cccCcCHHHH--HHHHHHhh
Confidence            9999999999  99887653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.90  E-value=1.2e-24  Score=201.59  Aligned_cols=134  Identities=19%  Similarity=0.196  Sum_probs=110.6

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------------CCccccC
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------------TPGYAAP   47 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------------t~~y~aP   47 (291)
                      +|+|+.|+++|+++||. ++.+|||||||.+||||+.++.                                 |+.|.+|
T Consensus       146 VLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsP  224 (738)
T KOG1989|consen  146 VLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSP  224 (738)
T ss_pred             HHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccCh
Confidence            48999999999999997 5688999999999999997763                                 9999999


Q ss_pred             cccc---CCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHH
Q 022858           48 ETWM---SFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMA  124 (291)
Q Consensus        48 E~~~---~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (291)
                      |++.   +..++.|+||||+||+||.|+....||+.....                    .++.....-+..+.....+.
T Consensus       225 EMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--------------------aIlng~Y~~P~~p~ys~~l~  284 (738)
T KOG1989|consen  225 EMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--------------------AILNGNYSFPPFPNYSDRLK  284 (738)
T ss_pred             HHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--------------------eEEeccccCCCCccHHHHHH
Confidence            9986   568999999999999999999999999866321                    11222222333456778999


Q ss_pred             HHHHHccccCCCCCCCCCccchhhhhhcccccc
Q 022858          125 LVALWRVQYKPEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       125 ~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      .|+..||+.||++||++.+|  +..+..+....
T Consensus       285 ~LI~~mL~~nP~~RPnI~Qv--~~~~~~l~~~~  315 (738)
T KOG1989|consen  285 DLIRTMLQPNPDERPNIYQV--LEEIFELANKP  315 (738)
T ss_pred             HHHHHHhccCcccCCCHHHH--HHHHHHHhcCC
Confidence            99999999999999999999  88777665544

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.90  E-value=9.2e-25  Score=188.51  Aligned_cols=136  Identities=18%  Similarity=0.227  Sum_probs=96.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                       ++.|+|||++.+..++.+
T Consensus       113 ~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  189 (290)
T cd07862         113 KDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATP  189 (290)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCc
Confidence            5689999999999999   99999999999999986542                       678999999988889999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhh---cCccch-------hhhhcc---cccchHHHHHHHHH
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLE---KGEFQD-------LIIVCG---MEKNNKEKAERMAL  125 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------~~~~~~---~~~~~~~~~~~~~~  125 (291)
                      +|||||||++|||++|++||.......    ....+.....   ...+..       ...+..   .....++....+.+
T Consensus       190 ~DiwslG~il~el~~g~~~f~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (290)
T cd07862         190 VDLWSVGCIFAEMFRRKPLFRGSSDVD----QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKD  265 (290)
T ss_pred             cchHHHHHHHHHHHcCCCCcCCCCHHH----HHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHH
Confidence            999999999999999999997654321    1111111000   000000       000000   00001123456779


Q ss_pred             HHHHccccCCCCCCCCCcc
Q 022858          126 VALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v  144 (291)
                      ++.+|++.||++||++.++
T Consensus       266 li~~~l~~~P~~R~s~~~~  284 (290)
T cd07862         266 LLLKCLTFNPAKRISAYSA  284 (290)
T ss_pred             HHHHHhccCchhcCCHHHH
Confidence            9999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.90  E-value=1.4e-24  Score=186.47  Aligned_cols=134  Identities=18%  Similarity=0.178  Sum_probs=103.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.+..                          ++.|+|||...+..+
T Consensus       112 ~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~  188 (279)
T cd05109         112 LNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRF  188 (279)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCC
Confidence            5689999999999999   99999999999999976432                          346999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++||+++ |..|+......        .....+..+..         .+.+..+...+.+++.+||+.|
T Consensus       189 ~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~d  251 (279)
T cd05109         189 THQSDVWSYGVTVWELMTFGAKPYDGIPAR--------EIPDLLEKGER---------LPQPPICTIDVYMIMVKCWMID  251 (279)
T ss_pred             CchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHCCCc---------CCCCccCCHHHHHHHHHHcCCC
Confidence            999999999999999998 88887543321        11111221111         1112234467889999999999


Q ss_pred             CCCCCCCCccchhhhhhcccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      |++||++.++  +..|+.....+
T Consensus       252 p~~Rp~~~~l--~~~l~~~~~~~  272 (279)
T cd05109         252 SECRPRFREL--VDEFSRMARDP  272 (279)
T ss_pred             hhhCcCHHHH--HHHHHHhhcCC
Confidence            9999999999  98887765544

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.90  E-value=7.7e-25  Score=180.70  Aligned_cols=140  Identities=17%  Similarity=0.116  Sum_probs=104.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      -+++.|++.|+.|+|+   +++|||||||+|||++.++.                        |.+|.|||.+.+ -.|.
T Consensus       104 k~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG  180 (396)
T KOG0593|consen  104 KKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYG  180 (396)
T ss_pred             HHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCC
Confidence            3688999999999999   99999999999999998764                        889999999987 5899


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHH-------HHhhc------CccchhhhhcccccchHHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVW-------KKLEK------GEFQDLIIVCGMEKNNKEKAERM  123 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~-------~~~~~------~~~~~~~~~~~~~~~~~~~~~~~  123 (291)
                      ..+||||.||++.||++|.+.+.+.+..+....+..-+-       ..+..      -.+++.-++..+....+....-+
T Consensus       181 ~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~  260 (396)
T KOG0593|consen  181 KPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVL  260 (396)
T ss_pred             CcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHH
Confidence            999999999999999999998876654321111111000       00111      11223333333344445566788


Q ss_pred             HHHHHHccccCCCCCCCCCcc
Q 022858          124 ALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       124 ~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ++++..|++.||++|++.+|+
T Consensus       261 ld~~k~cL~~dP~~R~sc~ql  281 (396)
T KOG0593|consen  261 LDLLKKCLKMDPDDRLSCEQL  281 (396)
T ss_pred             HHHHHHHhcCCccccccHHHH
Confidence            999999999999999999988

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.90  E-value=1.2e-24  Score=184.10  Aligned_cols=117  Identities=26%  Similarity=0.330  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcccc
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      ++.+|+.||.|||+   ++||||||||+|||||.++.                        |+.|||||++.+..|+..+
T Consensus       130 YlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~v  206 (357)
T KOG0598|consen  130 YLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAV  206 (357)
T ss_pred             HHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCccc
Confidence            56789999999999   99999999999999998764                        7999999999999999999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      |-||+|+++|||++|.+||......       . ....+..+.         ....+.-......+++...+..||++|-
T Consensus       207 DWWsLGillYeML~G~pPF~~~~~~-------~-~~~~I~~~k---------~~~~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  207 DWWSLGILLYEMLTGKPPFYAEDVK-------K-MYDKILKGK---------LPLPPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             chHhHHHHHHHHhhCCCCCcCccHH-------H-HHHHHhcCc---------CCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence            9999999999999999999876532       1 222222221         1111222345677888889999999996


Q ss_pred             C
Q 022858          140 S  140 (291)
Q Consensus       140 s  140 (291)
                      .
T Consensus       270 g  270 (357)
T KOG0598|consen  270 G  270 (357)
T ss_pred             C
Confidence            4

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.90  E-value=1.4e-24  Score=184.11  Aligned_cols=129  Identities=21%  Similarity=0.306  Sum_probs=101.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   ++|+||||||+||+++.+..                           +..|+|||.+....
T Consensus        98 ~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  174 (257)
T cd05116          98 TELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYK  174 (257)
T ss_pred             HHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCC
Confidence            5788999999999999   99999999999999986542                           25799999988888


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++||||||+++||+++ |..||......        .....+..+...         +.+...+..+.+++.+||+.
T Consensus       175 ~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~i~~~~~~---------~~~~~~~~~l~~li~~~~~~  237 (257)
T cd05116         175 FSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--------EVTQMIESGERM---------ECPQRCPPEMYDLMKLCWTY  237 (257)
T ss_pred             cCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHCCCCC---------CCCCCCCHHHHHHHHHHhcc
Confidence            8999999999999999998 99998654321        122223222211         11223456788999999999


Q ss_pred             CCCCCCCCCccchhhhhhc
Q 022858          134 KPEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~  152 (291)
                      ||++||++.+|  ...|++
T Consensus       238 ~p~~Rp~~~~i--~~~l~~  254 (257)
T cd05116         238 GVDERPGFAVV--ELRLRN  254 (257)
T ss_pred             CchhCcCHHHH--HHHHhc
Confidence            99999999999  888864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.90  E-value=1.4e-24  Score=187.37  Aligned_cols=133  Identities=20%  Similarity=0.233  Sum_probs=103.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++++.|++.||+|||+   .+++||||||+||+++.++.                          ++.|+|||++.+..+
T Consensus       123 ~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  199 (288)
T cd05093         123 LHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKF  199 (288)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCC
Confidence            5688999999999999   99999999999999986543                          346999999998889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||......        .....+..+....         .+...+..+.+++.+|++.+
T Consensus       200 ~~~sDiwslG~il~~l~t~g~~p~~~~~~~--------~~~~~i~~~~~~~---------~~~~~~~~l~~li~~~l~~~  262 (288)
T cd05093         200 TTESDVWSLGVVLWEIFTYGKQPWYQLSNN--------EVIECITQGRVLQ---------RPRTCPKEVYDLMLGCWQRE  262 (288)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCcCC---------CCCCCCHHHHHHHHHHccCC
Confidence            999999999999999998 88887544321        1122222222111         11123457899999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |.+||++.++  +..|+.+...
T Consensus       263 p~~Rpt~~~v--~~~l~~~~~~  282 (288)
T cd05093         263 PHMRLNIKEI--HSLLQNLAKA  282 (288)
T ss_pred             hhhCCCHHHH--HHHHHHHHHh
Confidence            9999999999  9998887643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.90  E-value=1.6e-24  Score=185.22  Aligned_cols=130  Identities=19%  Similarity=0.220  Sum_probs=100.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   ++|+||||||+|||++.++.                          ++.|++||...+..+
T Consensus       115 ~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~  191 (272)
T cd05075         115 VKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVY  191 (272)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCc
Confidence            4678999999999999   99999999999999986543                          346999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++||+++ |..||......        ........+...         .........+.+++.+||+.+
T Consensus       192 ~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~  254 (272)
T cd05075         192 TTKSDVWSFGVTMWEIATRGQTPYPGVENS--------EIYDYLRQGNRL---------KQPPDCLDGLYSLMSSCWLLN  254 (272)
T ss_pred             ChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999998 78887543221        122222222211         111234466889999999999


Q ss_pred             CCCCCCCCccchhhhhhcc
Q 022858          135 PEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~  153 (291)
                      |++||++.++  ++.|+..
T Consensus       255 p~~Rps~~~l--~~~l~~~  271 (272)
T cd05075         255 PKDRPSFETL--RCELEKA  271 (272)
T ss_pred             cccCcCHHHH--HHHHHhh
Confidence            9999999999  8888763

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.90  E-value=2.3e-24  Score=184.28  Aligned_cols=130  Identities=22%  Similarity=0.218  Sum_probs=100.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.+..                       +..|+|||++....++.+
T Consensus       115 ~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~  191 (270)
T cd05047         115 LHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTN  191 (270)
T ss_pred             HHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCch
Confidence            5688999999999999   99999999999999986543                       345999999988889999


Q ss_pred             cceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           59 CDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        59 ~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      +||||||+++|||++ |..||......        ........+..         ...+......+.+++.+|++.+|.+
T Consensus       192 ~Di~slG~il~el~~~g~~pf~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~  254 (270)
T cd05047         192 SDVWSYGVLLWEIVSLGGTPYCGMTCA--------ELYEKLPQGYR---------LEKPLNCDDEVYDLMRQCWREKPYE  254 (270)
T ss_pred             hhHHHHHHHHHHHHcCCCCCccccCHH--------HHHHHHhCCCC---------CCCCCcCCHHHHHHHHHHcccChhh
Confidence            999999999999997 99998643321        11111111110         0111223457889999999999999


Q ss_pred             CCCCCccchhhhhhcc
Q 022858          138 MPSMTVRPAKFMLHGS  153 (291)
Q Consensus       138 RPs~~~v~~~~~L~~~  153 (291)
                      ||++.++  +..|+.+
T Consensus       255 Rps~~~i--l~~l~~~  268 (270)
T cd05047         255 RPSFAQI--LVSLNRM  268 (270)
T ss_pred             CCCHHHH--HHHHHHh
Confidence            9999999  9988765

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.90  E-value=1.5e-24  Score=186.07  Aligned_cols=128  Identities=20%  Similarity=0.259  Sum_probs=98.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.++.                          ++.|+|||++.+..+
T Consensus       122 ~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  198 (277)
T cd05062         122 IQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVF  198 (277)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCc
Confidence            4678899999999999   99999999999999996543                          346999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||......        ........+....         .+..++..+.+++.+|++.+
T Consensus       199 ~~~~Di~slG~~l~el~~~~~~p~~~~~~~--------~~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~  261 (277)
T cd05062         199 TTYSDVWSFGVVLWEIATLAEQPYQGMSNE--------QVLRFVMEGGLLD---------KPDNCPDMLFELMRMCWQYN  261 (277)
T ss_pred             CchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHcCCcCC---------CCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999998 67787543211        1111121211111         11223467889999999999


Q ss_pred             CCCCCCCCccchhhhhh
Q 022858          135 PEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~  151 (291)
                      |++||++.|+  +..|+
T Consensus       262 p~~Rps~~e~--l~~l~  276 (277)
T cd05062         262 PKMRPSFLEI--ISSIK  276 (277)
T ss_pred             hhhCcCHHHH--HHHhh
Confidence            9999999999  88775

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=2.9e-24  Score=191.87  Aligned_cols=122  Identities=22%  Similarity=0.301  Sum_probs=100.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..+++||+.||.|||+   .+|||||||..|++|++++.                        ||-|.|||++.....+.
T Consensus       121 ry~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsf  197 (592)
T KOG0575|consen  121 RYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSF  197 (592)
T ss_pred             HHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCC
Confidence            3588999999999999   99999999999999998854                        99999999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      .+||||+||++|-||.|++||+....        ...+..+...+   ..-|       ........+|+...|+.||.+
T Consensus       198 EvDiWSlGcvmYtLL~G~PPFetk~v--------kety~~Ik~~~---Y~~P-------~~ls~~A~dLI~~lL~~~P~~  259 (592)
T KOG0575|consen  198 EVDIWSLGCVMYTLLVGRPPFETKTV--------KETYNKIKLNE---YSMP-------SHLSAEAKDLIRKLLRPNPSE  259 (592)
T ss_pred             chhhhhhhhHHHhhhhCCCCcccchH--------HHHHHHHHhcC---cccc-------cccCHHHHHHHHHHhcCCccc
Confidence            99999999999999999999986642        22333333221   1111       233456678888999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      |||+.+|
T Consensus       260 Rpsl~~v  266 (592)
T KOG0575|consen  260 RPSLDEV  266 (592)
T ss_pred             CCCHHHH
Confidence            9999999

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.90  E-value=1.2e-24  Score=189.20  Aligned_cols=135  Identities=16%  Similarity=0.109  Sum_probs=98.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++|+.||+.||+|||+   .+|+||||||+|||++.++.                          +..|+|||++....+
T Consensus       141 ~~i~~~i~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  217 (304)
T cd05096         141 LHVALQIASGMKYLSS---LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKF  217 (304)
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCC
Confidence            4689999999999999   99999999999999986542                          346999999988889


Q ss_pred             ccccceechhHHHHHHhh--CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           56 THKCDVRSFGMLLFEILG--RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      +.++||||||+++|||++  +..|+......    ............... ..     ....+..++..+.+++.+||+.
T Consensus       218 ~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~li~~cl~~  287 (304)
T cd05096         218 TTASDVWAFGVTLWEILMLCKEQPYGELTDE----QVIENAGEFFRDQGR-QV-----YLFRPPPCPQGLYELMLQCWSR  287 (304)
T ss_pred             CchhhhHHHHHHHHHHHHccCCCCCCcCCHH----HHHHHHHHHhhhccc-cc-----cccCCCCCCHHHHHHHHHHccC
Confidence            999999999999999986  45566543221    111111111111100 00     0111223456789999999999


Q ss_pred             CCCCCCCCCccchhhhhh
Q 022858          134 KPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~  151 (291)
                      +|++||++.+|  .+.|+
T Consensus       288 ~p~~RPs~~~i--~~~l~  303 (304)
T cd05096         288 DCRERPSFSDI--HAFLT  303 (304)
T ss_pred             CchhCcCHHHH--HHHHh
Confidence            99999999999  88875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.90  E-value=2e-24  Score=185.37  Aligned_cols=128  Identities=24%  Similarity=0.219  Sum_probs=98.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------CCccccCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------TPGYAAPETWMS   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------t~~y~aPE~~~~   52 (291)
                      ++++.||+.||+|||+   .+++||||||+||+++.++.                             +..|+|||++.+
T Consensus       119 ~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  195 (277)
T cd05036         119 LFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLD  195 (277)
T ss_pred             HHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhc
Confidence            4689999999999999   89999999999999975421                             235999999988


Q ss_pred             CCCccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcc
Q 022858           53 FPVTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRV  131 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  131 (291)
                      ..++.++|||||||++|||++ |..||......        ..........         ....+...+..+.+++.+|+
T Consensus       196 ~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~cl  258 (277)
T cd05036         196 GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--------EVMEFVTGGG---------RLDPPKGCPGPVYRIMTDCW  258 (277)
T ss_pred             CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHcCC---------cCCCCCCCCHHHHHHHHHHc
Confidence            889999999999999999996 88888654321        1111111110         01112233567889999999


Q ss_pred             ccCCCCCCCCCccchhhhhh
Q 022858          132 QYKPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       132 ~~~p~~RPs~~~v~~~~~L~  151 (291)
                      +.+|++||++.+|  ++.|+
T Consensus       259 ~~~p~~Rps~~~v--l~~l~  276 (277)
T cd05036         259 QHTPEDRPNFATI--LERIQ  276 (277)
T ss_pred             CCCcccCcCHHHH--HHHhh
Confidence            9999999999999  88775

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.90  E-value=3.3e-24  Score=185.68  Aligned_cols=134  Identities=18%  Similarity=0.104  Sum_probs=99.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------------CCccccCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------------TPGYAAPETW   50 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------------t~~y~aPE~~   50 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.++.                               |+.|+|||+.
T Consensus       129 ~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~  205 (294)
T PHA02882        129 KNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAH  205 (294)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHh
Confidence            4689999999999999   99999999999999975322                               6789999999


Q ss_pred             cCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHc
Q 022858           51 MSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWR  130 (291)
Q Consensus        51 ~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c  130 (291)
                      .+..++.++|||||||++|||++|+.||........   .........    +..+....   .....++..+.+++..|
T Consensus       206 ~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~---~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~  275 (294)
T PHA02882        206 NGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN---LIHAAKCDF----IKRLHEGK---IKIKNANKFIYDFIECV  275 (294)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH---HHHHhHHHH----HHHhhhhh---hccCCCCHHHHHHHHHH
Confidence            988999999999999999999999999976532211   111000000    00110000   01122347788999999


Q ss_pred             cccCCCCCCCCCccchhhhh
Q 022858          131 VQYKPEAMPSMTVRPAKFML  150 (291)
Q Consensus       131 l~~~p~~RPs~~~v~~~~~L  150 (291)
                      ++.+|++||++.++  .+.+
T Consensus       276 ~~~~~~~rp~~~~l--~~~~  293 (294)
T PHA02882        276 TKLSYEEKPDYDAL--IKIF  293 (294)
T ss_pred             HhCCCCCCCCHHHH--HHhh
Confidence            99999999999998  7654

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.90  E-value=3.5e-24  Score=182.96  Aligned_cols=130  Identities=18%  Similarity=0.224  Sum_probs=101.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.+..                          +..|+|||.+.+..+
T Consensus       116 ~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~  192 (273)
T cd05035         116 LKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVY  192 (273)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCC
Confidence            4688999999999999   99999999999999987643                          347999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..|+......        ........+..         ...+..+...+.+++.+|++.|
T Consensus       193 ~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~  255 (273)
T cd05035         193 TSKSDVWAFGVTMWEIATRGQTPYPGVENH--------EIYDYLRHGNR---------LKQPEDCLDELYDLMYSCWRAD  255 (273)
T ss_pred             CcccchHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCC---------CCCCcCCCHHHHHHHHHHcCCC
Confidence            999999999999999998 88887543321        11111211111         1112234568899999999999


Q ss_pred             CCCCCCCCccchhhhhhcc
Q 022858          135 PEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~  153 (291)
                      |++||++.++  +..|++.
T Consensus       256 p~~Rp~~~e~--~~~l~~~  272 (273)
T cd05035         256 PKDRPTFTKL--REVLENI  272 (273)
T ss_pred             hhhCcCHHHH--HHHHHhh
Confidence            9999999999  8888754

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.89  E-value=2.7e-24  Score=187.04  Aligned_cols=133  Identities=21%  Similarity=0.225  Sum_probs=102.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++++.||+.||.|||+   ++++||||||+||+++.++.                          ++.|+|||++.+..+
T Consensus       140 ~~~~~qi~~al~~LH~---~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  216 (304)
T cd05101         140 VSCTYQVARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVY  216 (304)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCC
Confidence            4578899999999999   99999999999999986432                          346999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++||+++ |..|+.....        .........+..         ...+..+...+.+++.+||+.+
T Consensus       217 ~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~  279 (304)
T cd05101         217 THQSDVWSFGVLMWEIFTLGGSPYPGIPV--------EELFKLLKEGHR---------MDKPANCTNELYMMMRDCWHAI  279 (304)
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHcCCc---------CCCCCCCCHHHHHHHHHHcccC
Confidence            999999999999999998 7777754321        112222222111         1112234567888999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |++||++.++  ++.|+++...
T Consensus       280 p~~Rps~~e~--l~~l~~~~~~  299 (304)
T cd05101         280 PSHRPTFKQL--VEDLDRILTL  299 (304)
T ss_pred             hhhCCCHHHH--HHHHHHHHHh
Confidence            9999999999  9999887654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.89  E-value=3.2e-24  Score=181.90  Aligned_cols=130  Identities=23%  Similarity=0.278  Sum_probs=102.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   .+++|+||||+|||++.++.                           +..|+|||.+.+..
T Consensus        98 ~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  174 (257)
T cd05060          98 KELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGK  174 (257)
T ss_pred             HHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCC
Confidence            5789999999999999   89999999999999986653                           24699999998888


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++||||||+++||+++ |..||......        .+...+.....         ...+...+..+.+++.+|++.
T Consensus       175 ~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~l~~li~~cl~~  237 (257)
T cd05060         175 FSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA--------EVIAMLESGER---------LPRPEECPQEIYSIMLSCWKY  237 (257)
T ss_pred             CCccchHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHHcCCc---------CCCCCCCCHHHHHHHHHHhcC
Confidence            9999999999999999998 99998644321        11222222111         111223346788999999999


Q ss_pred             CCCCCCCCCccchhhhhhcc
Q 022858          134 KPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~  153 (291)
                      +|++||++.++  ++.|++.
T Consensus       238 ~p~~Rp~~~~l--~~~l~~~  255 (257)
T cd05060         238 RPEDRPTFSEL--ESTFRRD  255 (257)
T ss_pred             ChhhCcCHHHH--HHHHHhc
Confidence            99999999999  9988765

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.89  E-value=1.8e-24  Score=186.77  Aligned_cols=132  Identities=20%  Similarity=0.236  Sum_probs=103.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+++||||||+|||++.++.                          +..|+|||++.+..+
T Consensus       130 ~~i~~~i~~~l~~LH~---~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~  206 (290)
T cd05045         130 ISFAWQISRGMQYLAE---MKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIY  206 (290)
T ss_pred             HHHHHHHHHHHHHHHH---CCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCc
Confidence            5788999999999999   99999999999999986543                          357999999888889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..|+......        .+......+.         ....+......+.+++..|++.+
T Consensus       207 ~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~cl~~~  269 (290)
T cd05045         207 TTQSDVWSFGVLLWEIVTLGGNPYPGIAPE--------RLFNLLKTGY---------RMERPENCSEEMYNLMLTCWKQE  269 (290)
T ss_pred             chHhHHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHhCCC---------CCCCCCCCCHHHHHHHHHHccCC
Confidence            999999999999999998 98888543321        1222222111         11112233467889999999999


Q ss_pred             CCCCCCCCccchhhhhhcccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      |++||++.++  +..|++...
T Consensus       270 P~~Rp~~~~i--~~~l~~~~~  288 (290)
T cd05045         270 PDKRPTFADI--SKELEKMMV  288 (290)
T ss_pred             cccCCCHHHH--HHHHHHHHh
Confidence            9999999999  999887643

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.89  E-value=3.6e-24  Score=183.74  Aligned_cols=128  Identities=21%  Similarity=0.262  Sum_probs=100.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||.|||+   .+++||||||+||+++.++.                          ++.|+|||++.+..+
T Consensus       125 ~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  201 (280)
T cd05049         125 LQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKF  201 (280)
T ss_pred             HHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCc
Confidence            4578999999999999   99999999999999975532                          346999999999899


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||......        ........+...         ..+...+..+.+++.+||+.|
T Consensus       202 ~~~~Di~slG~il~e~~~~g~~p~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~  264 (280)
T cd05049         202 TTESDVWSFGVVLWEIFTYGKQPWYGLSNE--------EVIECITQGRLL---------QRPRTCPSEVYDIMLGCWKRD  264 (280)
T ss_pred             chhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCcC---------CCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999998 99998644321        111222222111         112234567889999999999


Q ss_pred             CCCCCCCCccchhhhhh
Q 022858          135 PEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~  151 (291)
                      |++||++.|+  ++.|+
T Consensus       265 p~~Rp~~~ei--l~~l~  279 (280)
T cd05049         265 PQQRINIKDI--HERLQ  279 (280)
T ss_pred             cccCCCHHHH--HHHhh
Confidence            9999999999  88875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.89  E-value=3.2e-24  Score=181.84  Aligned_cols=129  Identities=22%  Similarity=0.206  Sum_probs=100.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCccccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      ++++.|++.||+|||+   .+++||||||+||+++.++.                     +..|+|||++.+..++.++|
T Consensus       105 ~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  181 (256)
T cd05082         105 LKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD  181 (256)
T ss_pred             HHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccccCCCCccceeecCHHHHccCCCCchhh
Confidence            5788999999999999   99999999999999986653                     44799999998888999999


Q ss_pred             eechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           61 VRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        61 v~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      |||||+++|||++ |+.|+.....        ....+.+..+.-         ......++..+.+++.+|++.+|++||
T Consensus       182 v~slG~i~~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp  244 (256)
T cd05082         182 VWSFGILLWEIYSFGRVPYPRIPL--------KDVVPRVEKGYK---------MDAPDGCPPVVYDVMKQCWHLDAATRP  244 (256)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhcCCC---------CCCCCCCCHHHHHHHHHHhcCChhhCc
Confidence            9999999999997 8888753321        112222222111         111123456788999999999999999


Q ss_pred             CCCccchhhhhhc
Q 022858          140 SMTVRPAKFMLHG  152 (291)
Q Consensus       140 s~~~v~~~~~L~~  152 (291)
                      ++.++  ++.|+.
T Consensus       245 t~~~l--~~~l~~  255 (256)
T cd05082         245 SFLQL--REQLEH  255 (256)
T ss_pred             CHHHH--HHHHhc
Confidence            99999  888865

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.89  E-value=6.2e-24  Score=180.58  Aligned_cols=129  Identities=22%  Similarity=0.254  Sum_probs=100.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      .+++.|++.||.|||+   .+++|+||||+||+++.++.                         +..|+|||.+.+..++
T Consensus       106 ~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  182 (261)
T cd05068         106 IDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFS  182 (261)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCC
Confidence            5788999999999999   99999999999999987653                         2369999999888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++|||++ |+.||......        .....+....         ........+..+.+++.+|++.+|
T Consensus       183 ~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~P  245 (261)
T cd05068         183 IKSDVWSFGILLTEIVTYGRMPYPGMTNA--------EVLQQVDQGY---------RMPCPPGCPKELYDIMLDCWKEDP  245 (261)
T ss_pred             chhhHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCC---------CCCCCCcCCHHHHHHHHHHhhcCc
Confidence            99999999999999999 88888644321        1112221110         011122345678999999999999


Q ss_pred             CCCCCCCccchhhhhhc
Q 022858          136 EAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~  152 (291)
                      ++||++.++  +..|+.
T Consensus       246 ~~Rp~~~~l--~~~l~~  260 (261)
T cd05068         246 DDRPTFETL--QWKLED  260 (261)
T ss_pred             ccCCCHHHH--HHHHhc
Confidence            999999999  888875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.89  E-value=4e-24  Score=183.97  Aligned_cols=129  Identities=22%  Similarity=0.239  Sum_probs=99.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   ++++||||||+|||++.+..                          +..|+|||++.+..+
T Consensus       127 ~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  203 (283)
T cd05090         127 LHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKF  203 (283)
T ss_pred             HHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCC
Confidence            4588999999999999   99999999999999986643                          235999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||.....        ..+.+.......         ...+..+...+.+++.+|++.+
T Consensus       204 ~~~~Dv~slG~il~el~~~g~~p~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~  266 (283)
T cd05090         204 SSDSDIWSFGVVLWEIFSFGLQPYYGFSN--------QEVIEMVRKRQL---------LPCSEDCPPRMYSLMTECWQEG  266 (283)
T ss_pred             CchhhhHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHcCCc---------CCCCCCCCHHHHHHHHHHcccC
Confidence            999999999999999998 8888754321        111222222111         1112233467888999999999


Q ss_pred             CCCCCCCCccchhhhhhc
Q 022858          135 PEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~  152 (291)
                      |.+||++.++  ++.|..
T Consensus       267 p~~Rp~~~~i--~~~l~~  282 (283)
T cd05090         267 PSRRPRFKDI--HTRLRS  282 (283)
T ss_pred             cccCcCHHHH--HHHhhc
Confidence            9999999999  887753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.89  E-value=4.8e-25  Score=187.52  Aligned_cols=128  Identities=33%  Similarity=0.333  Sum_probs=95.4

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCC
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~   54 (291)
                      +++|+.|||.||+|||+   .+++|+||+++|||++.++.                          ...|+|||.+.+..
T Consensus       105 ~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  181 (259)
T PF07714_consen  105 RLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGE  181 (259)
T ss_dssp             HHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSE
T ss_pred             ccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            36789999999999999   89999999999999997643                          55799999998888


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++||||||+++||+++ |+.|+......       + +...+.++..         ...+..++..+.+++..||+.
T Consensus       182 ~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~-------~-~~~~~~~~~~---------~~~~~~~~~~~~~li~~C~~~  244 (259)
T PF07714_consen  182 YTKKSDVYSFGMLLYEILTLGKFPFSDYDNE-------E-IIEKLKQGQR---------LPIPDNCPKDIYSLIQQCWSH  244 (259)
T ss_dssp             ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH-------H-HHHHHHTTEE---------TTSBTTSBHHHHHHHHHHT-S
T ss_pred             ccccccccccccccccccccccccccccccc-------c-cccccccccc---------ceeccchhHHHHHHHHHHcCC
Confidence            9999999999999999999 67776544221       1 1222222211         122233457788999999999


Q ss_pred             CCCCCCCCCccchhhhh
Q 022858          134 KPEAMPSMTVRPAKFML  150 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L  150 (291)
                      +|++||++.++  ++.|
T Consensus       245 ~p~~RPs~~~i--~~~L  259 (259)
T PF07714_consen  245 DPEKRPSFQEI--LQEL  259 (259)
T ss_dssp             SGGGS--HHHH--HHHH
T ss_pred             ChhhCcCHHHH--HhcC
Confidence            99999999999  7765

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.89  E-value=5e-24  Score=181.03  Aligned_cols=129  Identities=24%  Similarity=0.288  Sum_probs=99.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.+..                         +..|+|||.+.+..++
T Consensus       105 ~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  181 (260)
T cd05070         105 VDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT  181 (260)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCc
Confidence            5788999999999999   99999999999999987642                         2469999999888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++||+++ |..||......       + ....+..+.         ..+.+...+..+.+++.+|++.+|
T Consensus       182 ~~~Di~slG~~l~~l~~~g~~p~~~~~~~-------~-~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p  244 (260)
T cd05070         182 IKSDVWSFGILLTELVTKGRVPYPGMNNR-------E-VLEQVERGY---------RMPCPQDCPISLHELMLQCWKKDP  244 (260)
T ss_pred             chhhhHHHHHHHHHHHhcCCCCCCCCCHH-------H-HHHHHHcCC---------CCCCCCcCCHHHHHHHHHHcccCc
Confidence            99999999999999999 88888643211       1 111111110         111222345678999999999999


Q ss_pred             CCCCCCCccchhhhhhc
Q 022858          136 EAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~  152 (291)
                      ++|||+.++  .+.|+.
T Consensus       245 ~~Rpt~~~l--~~~l~~  259 (260)
T cd05070         245 EERPTFEYL--QSFLED  259 (260)
T ss_pred             ccCcCHHHH--HHHHhc
Confidence            999999999  887764

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.89  E-value=3.2e-24  Score=204.67  Aligned_cols=137  Identities=23%  Similarity=0.246  Sum_probs=112.3

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCC
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~   54 (291)
                      ++.|+.|||+|+.||++   +++|||||..+|+||++...                          ...|||||.+.++.
T Consensus       804 Ll~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~i  880 (1025)
T KOG1095|consen  804 LLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGI  880 (1025)
T ss_pred             HHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcc
Confidence            36899999999999999   99999999999999997643                          67899999999999


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.|+|||||||++||++| |..||....+.       + +...+.+         ....+.+..|+.++.++|..||+.
T Consensus       881 FtskSDvWsFGVllWEifslG~~PY~~~~n~-------~-v~~~~~~---------ggRL~~P~~CP~~ly~lM~~CW~~  943 (1025)
T KOG1095|consen  881 FTSKSDVWSFGVLLWEIFSLGATPYPSRSNF-------E-VLLDVLE---------GGRLDPPSYCPEKLYQLMLQCWKH  943 (1025)
T ss_pred             cccccchhhhHHHHHHHHhCCCCCCCCcchH-------H-HHHHHHh---------CCccCCCCCCChHHHHHHHHHccC
Confidence            9999999999999999996 77787655432       1 1111111         123455678889999999999999


Q ss_pred             CCCCCCCCCccchhhhhhcccccccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSLASMLN  159 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~~~~~~  159 (291)
                      +|++||++..+  +..+..+......
T Consensus       944 ~pe~RP~F~~i--~~q~~~i~~~~~~  967 (1025)
T KOG1095|consen  944 DPEDRPSFRTI--VEQDPAISNAALG  967 (1025)
T ss_pred             ChhhCccHHHH--Hhhhhhhhhhhcc
Confidence            99999999999  8888777665443

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.89  E-value=4.7e-24  Score=181.21  Aligned_cols=129  Identities=22%  Similarity=0.246  Sum_probs=99.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.++.                         +..|+|||++....++
T Consensus       106 ~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  182 (261)
T cd05072         106 IDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT  182 (261)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCC
Confidence            4678999999999999   99999999999999986543                         3469999999888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++|||++ |..||......        .....+..+..         .+.....+..+.+++.+|++.+|
T Consensus       183 ~~~Di~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p  245 (261)
T cd05072         183 IKSDVWSFGILLYEIVTYGKIPYPGMSNS--------DVMSALQRGYR---------MPRMENCPDELYDIMKTCWKEKA  245 (261)
T ss_pred             hhhhhhhhHHHHHHHHccCCCCCCCCCHH--------HHHHHHHcCCC---------CCCCCCCCHHHHHHHHHHccCCc
Confidence            99999999999999998 88888643321        11122221111         01111234678899999999999


Q ss_pred             CCCCCCCccchhhhhhc
Q 022858          136 EAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~  152 (291)
                      ++||++.++  .+.|+.
T Consensus       246 ~~Rp~~~~i--~~~l~~  260 (261)
T cd05072         246 EERPTFDYL--QSVLDD  260 (261)
T ss_pred             ccCcCHHHH--HHHHhc
Confidence            999999999  888864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.89  E-value=6.1e-24  Score=181.13  Aligned_cols=130  Identities=21%  Similarity=0.214  Sum_probs=101.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++++.|++.||+|||+   ++|+|+||||+|||++.++.                          ++.|+|||.+.+..+
T Consensus       109 ~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~  185 (266)
T cd05033         109 VGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKF  185 (266)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCC
Confidence            5688999999999999   99999999999999997643                          346999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++||+++ |..|+......        ........+..         .+.+...+..+.+++.+|++.+
T Consensus       186 ~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~l~~li~~cl~~~  248 (266)
T cd05033         186 TSASDVWSFGIVMWEVMSYGERPYWDMSNQ--------DVIKAVEDGYR---------LPPPMDCPSALYQLMLDCWQKD  248 (266)
T ss_pred             ccccchHHHHHHHHHHHccCCCCCCCCCHH--------HHHHHHHcCCC---------CCCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999997 98887543221        11222221111         1112234567889999999999


Q ss_pred             CCCCCCCCccchhhhhhcc
Q 022858          135 PEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~  153 (291)
                      |++||++.++  ++.|++.
T Consensus       249 p~~Rp~~~ei--~~~l~~~  265 (266)
T cd05033         249 RNERPTFSQI--VSTLDKM  265 (266)
T ss_pred             cccCcCHHHH--HHHHHhh
Confidence            9999999999  9888764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.89  E-value=1.7e-23  Score=170.67  Aligned_cols=126  Identities=21%  Similarity=0.234  Sum_probs=97.6

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccC---CCCc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMS---FPVT   56 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~---~~~~   56 (291)
                      ++...+..||.||-+  +++|||||+||+|||+|+.+.                       .+.|||||.+.-   ..|+
T Consensus       195 k~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYD  272 (391)
T KOG0983|consen  195 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYD  272 (391)
T ss_pred             hhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccc
Confidence            456778999999998  599999999999999998765                       778999999863   4799


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++||||||++++||.||+.||.....+      .+-+.+....  .+..+      +........+.+++..|++.|+.
T Consensus       273 iRaDVWSlGITlveLaTg~yPy~~c~td------Fe~ltkvln~--ePP~L------~~~~gFSp~F~~fv~~CL~kd~r  338 (391)
T KOG0983|consen  273 IRADVWSLGITLVELATGQYPYKGCKTD------FEVLTKVLNE--EPPLL------PGHMGFSPDFQSFVKDCLTKDHR  338 (391)
T ss_pred             hhhhhhhhccchhhhhcccCCCCCCCcc------HHHHHHHHhc--CCCCC------CcccCcCHHHHHHHHHHhhcCcc
Confidence            9999999999999999999999876543      1222222221  11111      11122567788999999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +||.-.++
T Consensus       339 ~RP~Y~~L  346 (391)
T KOG0983|consen  339 KRPKYNKL  346 (391)
T ss_pred             cCcchHHH
Confidence            99998888

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.89  E-value=4.7e-24  Score=183.35  Aligned_cols=128  Identities=18%  Similarity=0.209  Sum_probs=98.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+++||||||+|||++.++.                          ++.|+|||++.+..+
T Consensus       125 ~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  201 (280)
T cd05092         125 LAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKF  201 (280)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCc
Confidence            5678999999999999   99999999999999986543                          346999999998889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||++ |..||......       . .......+..         ...+..++..+.+++.+||+.|
T Consensus       202 ~~~~Di~slG~il~el~~~g~~p~~~~~~~-------~-~~~~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~  264 (280)
T cd05092         202 TTESDIWSFGVVLWEIFTYGKQPWYQLSNT-------E-AIECITQGRE---------LERPRTCPPEVYAIMQGCWQRE  264 (280)
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCCccCCHH-------H-HHHHHHcCcc---------CCCCCCCCHHHHHHHHHHccCC
Confidence            999999999999999998 88887543321       1 1111111110         1111233467889999999999


Q ss_pred             CCCCCCCCccchhhhhh
Q 022858          135 PEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~  151 (291)
                      |.+||++.+|  +..|+
T Consensus       265 P~~Rp~~~~l--~~~l~  279 (280)
T cd05092         265 PQQRMVIKDI--HSRLQ  279 (280)
T ss_pred             hhhCCCHHHH--HHHHh
Confidence            9999999999  88775

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.89  E-value=5.3e-24  Score=180.80  Aligned_cols=130  Identities=18%  Similarity=0.188  Sum_probs=101.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      ++++.|++.||+|||+   ++++||||||+|||++.+..                           +..|+|||++....
T Consensus        98 ~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  174 (257)
T cd05115          98 VELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRK  174 (257)
T ss_pred             HHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCC
Confidence            5789999999999999   99999999999999986542                           25699999998888


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++||||||+++||+++ |..||......        .+...+..+..         ...+..+...+.+++.+||+.
T Consensus       175 ~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~l~~li~~c~~~  237 (257)
T cd05115         175 FSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--------EVMSFIEQGKR---------LDCPAECPPEMYALMKDCWIY  237 (257)
T ss_pred             CCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHCCCC---------CCCCCCCCHHHHHHHHHHcCC
Confidence            9999999999999999996 99998654321        11222222211         112223457788999999999


Q ss_pred             CCCCCCCCCccchhhhhhcc
Q 022858          134 KPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~  153 (291)
                      +|++||++.+|  .+.|+..
T Consensus       238 ~~~~Rp~~~~i--~~~l~~~  255 (257)
T cd05115         238 KWEDRPNFAKV--EERMRTY  255 (257)
T ss_pred             ChhhCcCHHHH--HHHHhhh
Confidence            99999999999  8887653

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.89  E-value=1.4e-23  Score=178.88  Aligned_cols=133  Identities=19%  Similarity=0.305  Sum_probs=103.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.++.                        ++.|+|||.+.+..++.
T Consensus       109 ~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  185 (267)
T cd08228         109 WKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF  185 (267)
T ss_pred             HHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCc
Confidence            4688999999999999   99999999999999986543                        56799999998888899


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|+||||+++|||++|..|+......     ... ............        .........+.+++.+||+.+|++
T Consensus       186 ~~Di~slG~~l~el~~g~~p~~~~~~~-----~~~-~~~~~~~~~~~~--------~~~~~~~~~~~~li~~cl~~~p~~  251 (267)
T cd08228         186 KSDIWSLGCLLYEMAALQSPFYGDKMN-----LFS-LCQKIEQCDYPP--------LPTEHYSEKLRELVSMCIYPDPDQ  251 (267)
T ss_pred             hhhHHHHHHHHHHHhcCCCCCcccccc-----HHH-HHHHHhcCCCCC--------CChhhcCHHHHHHHHHHCCCCccc
Confidence            999999999999999999998543321     111 111222111111        112234567899999999999999


Q ss_pred             CCCCCccchhhhhhcc
Q 022858          138 MPSMTVRPAKFMLHGS  153 (291)
Q Consensus       138 RPs~~~v~~~~~L~~~  153 (291)
                      ||++.+|  ++.|++.
T Consensus       252 Rp~~~~v--l~~~~~~  265 (267)
T cd08228         252 RPDIGYV--HQIAKQM  265 (267)
T ss_pred             CcCHHHH--HHHHHHh
Confidence            9999999  9888765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.89  E-value=5e-24  Score=182.55  Aligned_cols=128  Identities=21%  Similarity=0.261  Sum_probs=100.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||.|||+   .+++||||||+||+++.++.                          +..|+|||.+.+..+
T Consensus       122 ~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  198 (277)
T cd05032         122 IQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVF  198 (277)
T ss_pred             HHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCC
Confidence            4688999999999999   99999999999999986543                          356999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++||+++ |..||......        ...+....+....         .+..++..+.+++.+|++.+
T Consensus       199 ~~~~Di~slG~il~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~  261 (277)
T cd05032         199 TTKSDVWSFGVVLWEMATLAEQPYQGLSNE--------EVLKFVIDGGHLD---------LPENCPDKLLELMRMCWQYN  261 (277)
T ss_pred             CcccchHHHHHHHHHhhccCCCCCccCCHH--------HHHHHHhcCCCCC---------CCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999998 88888543321        1122222211111         11223578899999999999


Q ss_pred             CCCCCCCCccchhhhhh
Q 022858          135 PEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~  151 (291)
                      |++|||+.++  +..|+
T Consensus       262 p~~Rpt~~~l--~~~l~  276 (277)
T cd05032         262 PKMRPTFLEI--VSSLK  276 (277)
T ss_pred             hhhCCCHHHH--HHHhc
Confidence            9999999999  88775

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.89  E-value=3.6e-24  Score=197.83  Aligned_cols=123  Identities=28%  Similarity=0.387  Sum_probs=97.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.++.                          |+.|+|||++.+..+
T Consensus       146 ~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~  222 (496)
T PTZ00283        146 GLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPY  222 (496)
T ss_pred             HHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCC
Confidence            3578999999999999   99999999999999986542                          667999999999899


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++|||||||++|||++|+.||.....       .. +......+...         +.+......+.+++.+||+.+|
T Consensus       223 s~k~DVwSlGvilyeLltG~~Pf~~~~~-------~~-~~~~~~~~~~~---------~~~~~~~~~l~~li~~~L~~dP  285 (496)
T PTZ00283        223 SKKADMFSLGVLLYELLTLKRPFDGENM-------EE-VMHKTLAGRYD---------PLPPSISPEMQEIVTALLSSDP  285 (496)
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCCCH-------HH-HHHHHhcCCCC---------CCCCCCCHHHHHHHHHHcccCh
Confidence            9999999999999999999999864432       11 11222111111         1122344678899999999999


Q ss_pred             CCCCCCCcc
Q 022858          136 EAMPSMTVR  144 (291)
Q Consensus       136 ~~RPs~~~v  144 (291)
                      ++||++.++
T Consensus       286 ~~RPs~~el  294 (496)
T PTZ00283        286 KRRPSSSKL  294 (496)
T ss_pred             hhCcCHHHH
Confidence            999999998

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.89  E-value=6e-24  Score=180.13  Aligned_cols=127  Identities=20%  Similarity=0.214  Sum_probs=98.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   ++|+||||||+||+++.++.                         +..|+|||++.+..++
T Consensus       103 ~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  179 (256)
T cd05114         103 LSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYS  179 (256)
T ss_pred             HHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccc
Confidence            5688999999999999   99999999999999986542                         3469999999888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++||+++ |+.||......       + ....+..+...         ..+......+.+++.+||+.+|
T Consensus       180 ~~~Di~s~G~~l~el~~~g~~p~~~~~~~-------~-~~~~i~~~~~~---------~~~~~~~~~~~~li~~c~~~~p  242 (256)
T cd05114         180 SKSDVWSFGVLMWEVFTEGKMPFEKKSNY-------E-VVEMISRGFRL---------YRPKLASMTVYEVMYSCWHEKP  242 (256)
T ss_pred             hhhhhHHHHHHHHHHHcCCCCCCCCCCHH-------H-HHHHHHCCCCC---------CCCCCCCHHHHHHHHHHccCCc
Confidence            99999999999999999 88888644321       1 11222221110         0011123578999999999999


Q ss_pred             CCCCCCCccchhhhh
Q 022858          136 EAMPSMTVRPAKFML  150 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L  150 (291)
                      ++||++.++  ++.|
T Consensus       243 ~~Rps~~~l--~~~l  255 (256)
T cd05114         243 EGRPTFAEL--LRAI  255 (256)
T ss_pred             ccCcCHHHH--HHhh
Confidence            999999999  8766

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.89  E-value=5.4e-24  Score=183.49  Aligned_cols=123  Identities=24%  Similarity=0.279  Sum_probs=93.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                       +..|+|||++.+..++.+
T Consensus       105 ~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~  181 (285)
T cd05631         105 IFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFS  181 (285)
T ss_pred             HHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcc
Confidence            4678999999999999   99999999999999986532                       678999999999899999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|||||||++|||++|+.||.......    ....+.......          ...........+.+++.+||+.||++|
T Consensus       182 ~DvwslGvil~el~~g~~pf~~~~~~~----~~~~~~~~~~~~----------~~~~~~~~s~~~~~li~~~l~~~P~~R  247 (285)
T cd05631         182 PDWWGLGCLIYEMIQGQSPFRKRKERV----KREEVDRRVKED----------QEEYSEKFSEDAKSICRMLLTKNPKER  247 (285)
T ss_pred             cCchhHHHHHHHHHhCCCCCCCCCcch----hHHHHHHHhhcc----------cccCCccCCHHHHHHHHHHhhcCHHHh
Confidence            999999999999999999997554221    011111111110          011122334677889999999999999


Q ss_pred             CCC
Q 022858          139 PSM  141 (291)
Q Consensus       139 Ps~  141 (291)
                      |++
T Consensus       248 ~~~  250 (285)
T cd05631         248 LGC  250 (285)
T ss_pred             cCC
Confidence            984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.89  E-value=5.9e-24  Score=181.35  Aligned_cols=130  Identities=21%  Similarity=0.210  Sum_probs=101.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.+..                           +..|+|||++.+..
T Consensus       110 ~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  186 (268)
T cd05063         110 VGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRK  186 (268)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCC
Confidence            5688999999999999   99999999999999986643                           23599999998888


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++||||||+++||+++ |..||......        .....+..+.         ..+...+.+..+.+++.+|++.
T Consensus       187 ~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--------~~~~~i~~~~---------~~~~~~~~~~~~~~li~~c~~~  249 (268)
T cd05063         187 FTSASDVWSFGIVMWEVMSFGERPYWDMSNH--------EVMKAINDGF---------RLPAPMDCPSAVYQLMLQCWQQ  249 (268)
T ss_pred             cChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--------HHHHHHhcCC---------CCCCCCCCCHHHHHHHHHHcCC
Confidence            9999999999999999997 99998543321        1222222111         1111223456789999999999


Q ss_pred             CCCCCCCCCccchhhhhhcc
Q 022858          134 KPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~  153 (291)
                      +|++||++.+|  ++.|+++
T Consensus       250 ~p~~Rp~~~~i--~~~l~~~  267 (268)
T cd05063         250 DRARRPRFVDI--VNLLDKL  267 (268)
T ss_pred             CcccCcCHHHH--HHHHHhh
Confidence            99999999999  9888764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.89  E-value=4.9e-24  Score=185.39  Aligned_cols=132  Identities=23%  Similarity=0.225  Sum_probs=101.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.++.|++.||+|||+   .+++||||||+|||++.++.                       +..|+|||++.+..++.+
T Consensus       127 ~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  203 (303)
T cd05088         127 LHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTN  203 (303)
T ss_pred             HHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCccc
Confidence            4688999999999999   99999999999999986543                       346999999888888999


Q ss_pred             cceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           59 CDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        59 ~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      +||||||+++|||+| |..||......        ........+..         ...+......+.+++.+|++.+|++
T Consensus       204 ~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~  266 (303)
T cd05088         204 SDVWSYGVLLWEIVSLGGTPYCGMTCA--------ELYEKLPQGYR---------LEKPLNCDDEVYDLMRQCWREKPYE  266 (303)
T ss_pred             ccchhhhhHHHHHHhcCCCCcccCChH--------HHHHHHhcCCc---------CCCCCCCCHHHHHHHHHHcCCChhh
Confidence            999999999999998 99988543321        11111111100         0111123456789999999999999


Q ss_pred             CCCCCccchhhhhhcccc
Q 022858          138 MPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       138 RPs~~~v~~~~~L~~~~~  155 (291)
                      ||++.++  +..|+.+..
T Consensus       267 Rp~~~~i--l~~l~~~~~  282 (303)
T cd05088         267 RPSFAQI--LVSLNRMLE  282 (303)
T ss_pred             CcCHHHH--HHHHHHHHH
Confidence            9999999  988876644

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.89  E-value=1.7e-23  Score=178.26  Aligned_cols=125  Identities=22%  Similarity=0.210  Sum_probs=93.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC--------------C-------------CCccccCcccc-CC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--------------W-------------TPGYAAPETWM-SF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~--------------~-------------t~~y~aPE~~~-~~   53 (291)
                      ++|+.||+.||+|||+   .+|+||||||+|||++.++              +             +..|+|||.+. +.
T Consensus       108 ~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~  184 (262)
T cd05077         108 FKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQECVERIPWIAPECVEDSK  184 (262)
T ss_pred             HHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcccccccccccChhhhcCCC
Confidence            5789999999999999   9999999999999997432              1             56799999887 45


Q ss_pred             CCccccceechhHHHHHHh-hCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           54 PVTHKCDVRSFGMLLFEIL-GRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      .++.++||||||+++|||+ +|..|+......       + .. ....... ..         .......+.+++.+||+
T Consensus       185 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-------~-~~-~~~~~~~-~~---------~~~~~~~~~~li~~cl~  245 (262)
T cd05077         185 NLSIAADKWSFGTTLWEICYNGEIPLKDKTLA-------E-KE-RFYEGQC-ML---------VTPSCKELADLMTHCMN  245 (262)
T ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCcchh-------H-HH-HHHhcCc-cC---------CCCChHHHHHHHHHHcC
Confidence            7889999999999999998 577776543211       0 00 1111110 00         01113567889999999


Q ss_pred             cCCCCCCCCCccchhhhh
Q 022858          133 YKPEAMPSMTVRPAKFML  150 (291)
Q Consensus       133 ~~p~~RPs~~~v~~~~~L  150 (291)
                      .||++||++.++  ++.|
T Consensus       246 ~dp~~Rp~~~~i--l~~~  261 (262)
T cd05077         246 YDPNQRPFFRAI--MRDI  261 (262)
T ss_pred             CChhhCcCHHHH--HHhc
Confidence            999999999999  7765

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.89  E-value=1.9e-23  Score=187.77  Aligned_cols=147  Identities=20%  Similarity=0.191  Sum_probs=99.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.|+.||+.||+|||+   .+||||||||+|||++.++.                         |+.|+|||++.+..++
T Consensus       185 ~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  261 (391)
T PHA03212        185 LAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYG  261 (391)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCC
Confidence            5688999999999999   99999999999999976532                         6789999999988999


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCc---hhHHHHHHhhc----------Cccchhh----hhcc----ccc-
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPS---GFKWVWKKLEK----------GEFQDLI----IVCG----MEK-  114 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~---~~~~~~~~~~~----------~~~~~~~----~~~~----~~~-  114 (291)
                      .++|||||||++|||++|..|+...........   ....+......          ..+....    ....    ..+ 
T Consensus       262 ~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (391)
T PHA03212        262 PAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPL  341 (391)
T ss_pred             cHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCC
Confidence            999999999999999999988654322111100   00001000000          0000000    0000    000 


Q ss_pred             --chHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhh
Q 022858          115 --NNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       115 --~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~  151 (291)
                        .....+..+.+++.+||+.||.+|||+.|++....+.
T Consensus       342 ~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~  380 (391)
T PHA03212        342 WTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQ  380 (391)
T ss_pred             HHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhc
Confidence              0112345788999999999999999999993334443

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.89  E-value=5.6e-24  Score=180.77  Aligned_cols=131  Identities=23%  Similarity=0.263  Sum_probs=98.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMSF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~~   53 (291)
                      +.++.|++.||+|||+   .+++||||||+|||++.+..                            +..|+|||.+.+.
T Consensus       101 ~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  177 (262)
T cd05058         101 IGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQ  177 (262)
T ss_pred             HHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccC
Confidence            4678899999999999   99999999999999986532                            3369999999888


Q ss_pred             CCccccceechhHHHHHHhhC-CCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           54 PVTHKCDVRSFGMLLFEILGR-RRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      .++.++||||||+++|||++| .+|+.....       .+ .......+..         ...+...+..+.+++..||+
T Consensus       178 ~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-------~~-~~~~~~~~~~---------~~~~~~~~~~~~~li~~cl~  240 (262)
T cd05058         178 KFTTKSDVWSFGVLLWELMTRGAPPYPDVDS-------FD-ITVYLLQGRR---------LLQPEYCPDPLYEVMLSCWH  240 (262)
T ss_pred             ccchHHHHHHHHHHHHHHHcCCCCCCCCCCH-------HH-HHHHHhcCCC---------CCCCCcCCHHHHHHHHHHcC
Confidence            899999999999999999995 455543221       11 1111111110         01111234578899999999


Q ss_pred             cCCCCCCCCCccchhhhhhccc
Q 022858          133 YKPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       133 ~~p~~RPs~~~v~~~~~L~~~~  154 (291)
                      .+|++||++.++  +..|++..
T Consensus       241 ~~p~~Rp~~~~i--l~~l~~~~  260 (262)
T cd05058         241 PKPEMRPTFSEL--VSRIEQIF  260 (262)
T ss_pred             CChhhCCCHHHH--HHHHHHHh
Confidence            999999999999  99887654

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.89  E-value=6.5e-24  Score=184.61  Aligned_cols=133  Identities=17%  Similarity=0.188  Sum_probs=102.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.+..                          +..|++||++.+..+
T Consensus       112 ~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~  188 (303)
T cd05110         112 LNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF  188 (303)
T ss_pred             HHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCC
Confidence            5788999999999999   99999999999999976432                          347999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++||+++ |..|+......        ........+..         ...+..+...+.+++..||..+
T Consensus       189 ~~~~DiwslG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~~~li~~c~~~~  251 (303)
T cd05110         189 THQSDVWSYGVTIWELMTFGGKPYDGIPTR--------EIPDLLEKGER---------LPQPPICTIDVYMVMVKCWMID  251 (303)
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHCCCC---------CCCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999997 88887543211        11111211111         0111223457889999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |++||++.++  ++.|+.....
T Consensus       252 p~~Rp~~~~l--~~~l~~~~~~  271 (303)
T cd05110         252 ADSRPKFKEL--AAEFSRMARD  271 (303)
T ss_pred             hhhCcCHHHH--HHHHHHHHhc
Confidence            9999999999  9988876544

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.89  E-value=5.7e-24  Score=182.63  Aligned_cols=131  Identities=22%  Similarity=0.233  Sum_probs=101.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.+..                          +..|+|||++.+..+
T Consensus       120 ~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~  196 (280)
T cd05043         120 VHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEY  196 (280)
T ss_pred             HHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCC
Confidence            5688999999999999   99999999999999976542                          335999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++||+++ |+.||......       + .......+..         ......++..+.+++.+|++.+
T Consensus       197 ~~~~Di~slG~~l~el~~~g~~p~~~~~~~-------~-~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~  259 (280)
T cd05043         197 SSASDVWSFGVLLWELMTLGQTPYVEIDPF-------E-MAAYLKDGYR---------LAQPINCPDELFAVMACCWALD  259 (280)
T ss_pred             CchhhHHHhHHHHHHHhcCCCCCcCcCCHH-------H-HHHHHHcCCC---------CCCCCcCCHHHHHHHHHHcCCC
Confidence            999999999999999998 99998654321       1 1112221110         0111223467889999999999


Q ss_pred             CCCCCCCCccchhhhhhccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~  154 (291)
                      |++||++.++  +..|+...
T Consensus       260 p~~Rps~~~~--~~~l~~~~  277 (280)
T cd05043         260 PEERPSFSQL--VQCLTDFH  277 (280)
T ss_pred             hhhCCCHHHH--HHHHHHHH
Confidence            9999999999  98887764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.89  E-value=4.5e-24  Score=185.92  Aligned_cols=133  Identities=23%  Similarity=0.236  Sum_probs=103.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++++.|++.||+|||+   ++++||||||+||+++.++.                          ++.|+|||++.+..+
T Consensus       143 ~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  219 (307)
T cd05098         143 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY  219 (307)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCC
Confidence            5689999999999999   99999999999999986542                          246999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||++ |..|+.....        ..+......+..         ...+......+.+++.+|++.+
T Consensus       220 ~~~~DvwslG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~  282 (307)
T cd05098         220 THQSDVWSFGVLLWEIFTLGGSPYPGVPV--------EELFKLLKEGHR---------MDKPSNCTNELYMMMRDCWHAV  282 (307)
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCCCcCCH--------HHHHHHHHcCCC---------CCCCCcCCHHHHHHHHHHcccC
Confidence            999999999999999998 7788753321        112222222111         1112234467888999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |++||++.++  ++.|+.+...
T Consensus       283 p~~Rps~~ev--l~~l~~~~~~  302 (307)
T cd05098         283 PSQRPTFKQL--VEDLDRILAL  302 (307)
T ss_pred             hhhCcCHHHH--HHHHHHHHHH
Confidence            9999999999  9999887553

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.89  E-value=1.1e-23  Score=178.86  Aligned_cols=126  Identities=21%  Similarity=0.180  Sum_probs=94.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMSF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~~   53 (291)
                      ++++.||+.||+|||+   ++|+||||||+||+++.+..                            ++.|+|||++.+.
T Consensus       103 ~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~  179 (258)
T cd05078         103 LEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPPECIENP  179 (258)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEecccccccccCCchhccccCCccCchhccCC
Confidence            5688999999999999   99999999999999965421                            5679999998864


Q ss_pred             -CCccccceechhHHHHHHhhCC-CccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcc
Q 022858           54 -PVTHKCDVRSFGMLLFEILGRR-RMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRV  131 (291)
Q Consensus        54 -~~~~~~Dv~s~G~~l~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  131 (291)
                       .++.++||||||+++||+++|. .|+......       ... .....  .         ...+......+.+++.+||
T Consensus       180 ~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~-------~~~-~~~~~--~---------~~~~~~~~~~~~~li~~~l  240 (258)
T cd05078         180 QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ-------KKL-QFYED--R---------HQLPAPKWTELANLINQCM  240 (258)
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCChhhccHH-------HHH-HHHHc--c---------ccCCCCCcHHHHHHHHHHh
Confidence             5789999999999999999985 454332211       000 00100  0         0111122356889999999


Q ss_pred             ccCCCCCCCCCccchhhhhh
Q 022858          132 QYKPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       132 ~~~p~~RPs~~~v~~~~~L~  151 (291)
                      +.+|++||++.++  ++.|+
T Consensus       241 ~~~p~~Rps~~~i--l~~l~  258 (258)
T cd05078         241 DYEPDFRPSFRAI--IRDLN  258 (258)
T ss_pred             ccChhhCCCHHHH--HHhcC
Confidence            9999999999999  88763

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.89  E-value=7.2e-24  Score=179.16  Aligned_cols=128  Identities=20%  Similarity=0.218  Sum_probs=98.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.+..                          +..|+|||.+.+..+
T Consensus        97 ~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  173 (252)
T cd05084          97 IQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRY  173 (252)
T ss_pred             HHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCC
Confidence            5688999999999999   99999999999999986643                          134999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++||+++ |..|+......        ..........         ....+...+..+.+++.+|++.+
T Consensus       174 ~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~  236 (252)
T cd05084         174 SSESDVWSFGILLWEAFSLGAVPYANLSNQ--------QTREAIEQGV---------RLPCPELCPDAVYRLMERCWEYD  236 (252)
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCccccCHH--------HHHHHHHcCC---------CCCCcccCCHHHHHHHHHHcCCC
Confidence            999999999999999997 88887543221        1111111110         01112233567889999999999


Q ss_pred             CCCCCCCCccchhhhhh
Q 022858          135 PEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~  151 (291)
                      |++||++.++  +++|.
T Consensus       237 p~~Rps~~~~--~~~l~  251 (252)
T cd05084         237 PGQRPSFSTV--HQELQ  251 (252)
T ss_pred             hhhCcCHHHH--HHHHh
Confidence            9999999999  88775

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>PTZ00284 protein kinase; Provisional

Probab=99.89  E-value=3.6e-23  Score=190.38  Aligned_cols=79  Identities=23%  Similarity=0.390  Sum_probs=69.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-------------------------------------CCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-------------------------------------WTPGY   44 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-------------------------------------~t~~y   44 (291)
                      ..|+.||+.||+|||+.  .+||||||||+|||++.++                                     +|+.|
T Consensus       234 ~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y  311 (467)
T PTZ00284        234 AQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHY  311 (467)
T ss_pred             HHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCccccccccCCccc
Confidence            46889999999999971  5999999999999997532                                     16789


Q ss_pred             ccCccccCCCCccccceechhHHHHHHhhCCCcccccc
Q 022858           45 AAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        45 ~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                      +|||++.+..++.++|||||||++|||++|+.||....
T Consensus       312 ~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~  349 (467)
T PTZ00284        312 RSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD  349 (467)
T ss_pred             cCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999999999999999999997544

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.89  E-value=8.6e-24  Score=179.55  Aligned_cols=129  Identities=24%  Similarity=0.282  Sum_probs=100.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.+..                        +..|++||.+.+..++.
T Consensus       107 ~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~  183 (261)
T cd05148         107 IDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFST  183 (261)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCc
Confidence            5688999999999999   99999999999999986642                        34699999998888999


Q ss_pred             ccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           58 KCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        58 ~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      ++||||||+++|++++ |+.||......        ........+         ...+.+..++..+.+++.+|++.+|+
T Consensus       184 ~~DiwslG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~p~  246 (261)
T cd05148         184 KSDVWSFGILLYEMFTYGQVPYPGMNNH--------EVYDQITAG---------YRMPCPAKCPQEIYKIMLECWAAEPE  246 (261)
T ss_pred             hhhHHHHHHHHHHHHcCCCCCCCcCCHH--------HHHHHHHhC---------CcCCCCCCCCHHHHHHHHHHcCCCch
Confidence            9999999999999998 88888544311        111111111         11112234457788999999999999


Q ss_pred             CCCCCCccchhhhhhc
Q 022858          137 AMPSMTVRPAKFMLHG  152 (291)
Q Consensus       137 ~RPs~~~v~~~~~L~~  152 (291)
                      +||++.++  ++.|+.
T Consensus       247 ~Rpt~~~l--~~~L~~  260 (261)
T cd05148         247 DRPSFKAL--REELDN  260 (261)
T ss_pred             hCcCHHHH--HHHHhc
Confidence            99999999  998875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.89  E-value=1.3e-23  Score=181.82  Aligned_cols=135  Identities=19%  Similarity=0.167  Sum_probs=98.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.+..                          ++.|+|||++.+..+
T Consensus       133 ~~~~~~i~~al~~LH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  209 (296)
T cd05051         133 LYMATQIASGMRYLES---LNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKF  209 (296)
T ss_pred             HHHHHHHHHHHHHHHH---cCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCC
Confidence            5688999999999999   99999999999999986532                          346999999988889


Q ss_pred             ccccceechhHHHHHHhh--CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           56 THKCDVRSFGMLLFEILG--RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      +.++||||||+++|||++  +..|+......    .................      ....+...+..+.+++.+|++.
T Consensus       210 ~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~  279 (296)
T cd05051         210 TTKSDVWAFGVTLWEILTLCREQPYEHLTDQ----QVIENAGHFFRDDGRQI------YLPRPPNCPKDIYELMLECWRR  279 (296)
T ss_pred             CccchhhhhHHHHHHHHhcCCCCCCCCcChH----HHHHHHHhccccccccc------cCCCccCCCHHHHHHHHHHhcc
Confidence            999999999999999998  66666433211    11111111111110000      0111223346789999999999


Q ss_pred             CCCCCCCCCccchhhhhh
Q 022858          134 KPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~  151 (291)
                      +|++||++.++  ++.|+
T Consensus       280 ~p~~Rpt~~el--~~~L~  295 (296)
T cd05051         280 DEEDRPTFREI--HLFLQ  295 (296)
T ss_pred             ChhcCCCHHHH--HHHhc
Confidence            99999999999  88875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.89  E-value=2.8e-24  Score=196.08  Aligned_cols=146  Identities=16%  Similarity=0.182  Sum_probs=99.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.+..                        ++.|+|||++.+. .++
T Consensus       173 ~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  249 (440)
T PTZ00036        173 KLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYT  249 (440)
T ss_pred             HHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCC
Confidence            3577899999999999   99999999999999985431                        6679999998764 689


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc----------Cccchhhhhc-----ccccchHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK----------GEFQDLIIVC-----GMEKNNKEKAE  121 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~-----~~~~~~~~~~~  121 (291)
                      .++|||||||++|||++|.+||........    ...+......          ....++.-+.     .....+...+.
T Consensus       250 ~~~DiwSlGvil~elltG~~pf~~~~~~~~----~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~  325 (440)
T PTZ00036        250 THIDLWSLGCIIAEMILGYPIFSGQSSVDQ----LVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPD  325 (440)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCH
Confidence            999999999999999999999976542210    0001110000          0000000000     00001112345


Q ss_pred             HHHHHHHHccccCCCCCCCCCccchhhhhhccc
Q 022858          122 RMALVALWRVQYKPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       122 ~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~  154 (291)
                      .+.+++.+||+.||.+|||+.|+.....+....
T Consensus       326 ~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        326 DAINFISQFLKYEPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence            788999999999999999999994445555443

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.88  E-value=8e-24  Score=179.56  Aligned_cols=128  Identities=19%  Similarity=0.227  Sum_probs=98.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      ++++.||+.||+|||+   .+++|+||||+||+++.++.                         +..|++||++.+..++
T Consensus       103 ~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~  179 (256)
T cd05113         103 LEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFS  179 (256)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCccc
Confidence            5789999999999999   99999999999999986543                         2469999999888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++|||++ |..|+......        ........+...         ..+......+.+++.+||+.+|
T Consensus       180 ~~~Di~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p  242 (256)
T cd05113         180 SKSDVWAFGVLMWEVYSLGKMPYERFNNS--------ETVEKVSQGLRL---------YRPHLASEKVYAIMYSCWHEKA  242 (256)
T ss_pred             chhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHhcCCCC---------CCCCCCCHHHHHHHHHHcCCCc
Confidence            99999999999999998 88887543321        111112111111         1111224678999999999999


Q ss_pred             CCCCCCCccchhhhhh
Q 022858          136 EAMPSMTVRPAKFMLH  151 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~  151 (291)
                      ++||++.++  +..|+
T Consensus       243 ~~Rp~~~~l--l~~~~  256 (256)
T cd05113         243 EERPTFQQL--LSSIE  256 (256)
T ss_pred             ccCCCHHHH--HHhhC
Confidence            999999999  77653

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.88  E-value=8e-24  Score=182.40  Aligned_cols=136  Identities=20%  Similarity=0.215  Sum_probs=96.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                       +..|+|||++.+..++.+
T Consensus       111 ~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  187 (288)
T cd07863         111 KDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATP  187 (288)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCc
Confidence            4688999999999999   99999999999999986543                       567999999988889999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---Cccch-------hhhh---cccccchHHHHHHHHH
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---GEFQD-------LIIV---CGMEKNNKEKAERMAL  125 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------~~~~---~~~~~~~~~~~~~~~~  125 (291)
                      +||||+||++|||++|.+||.......    ....+......   ..+..       ...+   .......+.....+.+
T Consensus       188 ~DiwslG~~l~~l~~g~~~f~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (288)
T cd07863         188 VDMWSVGCIFAEMFRRKPLFCGNSEAD----QLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQ  263 (288)
T ss_pred             chhhhHHHHHHHHHhCCcCcCCCCHHH----HHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHH
Confidence            999999999999999999986543210    00111110000   00000       0000   0000111223456789


Q ss_pred             HHHHccccCCCCCCCCCcc
Q 022858          126 VALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v  144 (291)
                      ++.+|++.||++||++.++
T Consensus       264 li~~~L~~dP~~R~t~~~~  282 (288)
T cd07863         264 LLLEMLTFNPHKRISAFRA  282 (288)
T ss_pred             HHHHHhccCcccCCCHHHH
Confidence            9999999999999999888

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.88  E-value=1.4e-23  Score=178.30  Aligned_cols=129  Identities=23%  Similarity=0.281  Sum_probs=100.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.++.                         +..|+|||...+..++
T Consensus       105 ~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~  181 (260)
T cd05069         105 VDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT  181 (260)
T ss_pred             HHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcC
Confidence            4688999999999999   99999999999999986643                         3469999999888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++||+++ |..||......       . .......+..         ...+...+..+.+++.+||+.+|
T Consensus       182 ~~~Di~slG~~l~el~t~g~~p~~~~~~~-------~-~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p  244 (260)
T cd05069         182 IKSDVWSFGILLTELVTKGRVPYPGMVNR-------E-VLEQVERGYR---------MPCPQGCPESLHELMKLCWKKDP  244 (260)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCCCCHH-------H-HHHHHHcCCC---------CCCCcccCHHHHHHHHHHccCCc
Confidence            99999999999999999 88888654321       0 1111111100         11122345678899999999999


Q ss_pred             CCCCCCCccchhhhhhc
Q 022858          136 EAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~  152 (291)
                      ++||++.++  ++.|+.
T Consensus       245 ~~Rp~~~~i--~~~l~~  259 (260)
T cd05069         245 DERPTFEYI--QSFLED  259 (260)
T ss_pred             ccCcCHHHH--HHHHhc
Confidence            999999999  888764

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.88  E-value=1.2e-23  Score=183.85  Aligned_cols=132  Identities=22%  Similarity=0.255  Sum_probs=102.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++++.|++.||.|||+   ++++||||||+|||++.++.                          +..|+|||++.+..+
T Consensus       137 ~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  213 (314)
T cd05099         137 VSCAYQVARGMEYLES---RRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVY  213 (314)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCc
Confidence            4578999999999999   99999999999999986543                          246999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++||+++ |..||.....        ..+......+...         ..+..++..+.+++.+|++.+
T Consensus       214 ~~~~DiwslG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~~  276 (314)
T cd05099         214 THQSDVWSFGILMWEIFTLGGSPYPGIPV--------EELFKLLREGHRM---------DKPSNCTHELYMLMRECWHAV  276 (314)
T ss_pred             CccchhhHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999998 8888754321        1122222221111         112233457889999999999


Q ss_pred             CCCCCCCCccchhhhhhcccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      |++||++.++  +..|.+...
T Consensus       277 p~~Rps~~~l--l~~l~~~~~  295 (314)
T cd05099         277 PTQRPTFKQL--VEALDKVLA  295 (314)
T ss_pred             cccCcCHHHH--HHHHHHHHH
Confidence            9999999999  998887754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.88  E-value=1.9e-23  Score=178.23  Aligned_cols=128  Identities=22%  Similarity=0.304  Sum_probs=99.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-----C--------------------------CCccccCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-----W--------------------------TPGYAAPETW   50 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-----~--------------------------t~~y~aPE~~   50 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.+.     .                          +..|+|||.+
T Consensus       109 ~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  185 (269)
T cd05044         109 LDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESL  185 (269)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHH
Confidence            5688999999999999   9999999999999998755     1                          3569999999


Q ss_pred             cCCCCccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHH
Q 022858           51 MSFPVTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALW  129 (291)
Q Consensus        51 ~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  129 (291)
                      .+..++.++||||||+++|||++ |..||......       + .......+.         ....+...+..+.+++.+
T Consensus       186 ~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~-------~-~~~~~~~~~---------~~~~~~~~~~~~~~li~~  248 (269)
T cd05044         186 LDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ-------E-VLQHVTAGG---------RLQKPENCPDKIYQLMTN  248 (269)
T ss_pred             ccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH-------H-HHHHHhcCC---------ccCCcccchHHHHHHHHH
Confidence            98899999999999999999998 99888643321       1 111111111         111122345678899999


Q ss_pred             ccccCCCCCCCCCccchhhhhh
Q 022858          130 RVQYKPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       130 cl~~~p~~RPs~~~v~~~~~L~  151 (291)
                      ||+.+|++||++.++  ++.|+
T Consensus       249 ~l~~~p~~Rp~~~~i--~~~l~  268 (269)
T cd05044         249 CWAQDPSERPTFDRI--QEILQ  268 (269)
T ss_pred             HcCCCcccCCCHHHH--HHHHh
Confidence            999999999999999  88775

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.88  E-value=1.7e-23  Score=178.20  Aligned_cols=129  Identities=24%  Similarity=0.257  Sum_probs=100.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.+..                         +..|+|||+..+..++
T Consensus       105 ~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  181 (262)
T cd05071         105 VDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT  181 (262)
T ss_pred             HHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCC
Confidence            5688999999999999   99999999999999986542                         3469999999888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++||+++ |..||......        ........+.         ........+..+.+++.+|++.+|
T Consensus       182 ~~~DvwslG~~l~ellt~g~~p~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~~p  244 (262)
T cd05071         182 IKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGY---------RMPCPPECPESLHDLMCQCWRKEP  244 (262)
T ss_pred             chhhHHHHHHHHHHHHcCCCCCCCCCChH--------HHHHHHhcCC---------CCCCccccCHHHHHHHHHHccCCc
Confidence            99999999999999999 77787544321        1111111111         011223455778999999999999


Q ss_pred             CCCCCCCccchhhhhhc
Q 022858          136 EAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~  152 (291)
                      ++||++.++  ++.|+.
T Consensus       245 ~~Rp~~~~~--~~~l~~  259 (262)
T cd05071         245 EERPTFEYL--QAFLED  259 (262)
T ss_pred             ccCCCHHHH--HHHHHH
Confidence            999999999  888865

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.88  E-value=1e-23  Score=181.81  Aligned_cols=129  Identities=18%  Similarity=0.207  Sum_probs=100.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.++.                          ++.|+|||.+.+..+
T Consensus       133 ~~~~~~i~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  209 (288)
T cd05050         133 LCIAKQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRY  209 (288)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCC
Confidence            5789999999999999   99999999999999986543                          335999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||++ |..||......        ........+...         ..+...+..+.+++.+|++.+
T Consensus       210 ~~~~Dv~slG~il~el~~~~~~p~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~  272 (288)
T cd05050         210 TTESDVWAYGVVLWEIFSYGMQPYYGMAHE--------EVIYYVRDGNVL---------SCPDNCPLELYNLMRLCWSKL  272 (288)
T ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHhcCCCC---------CCCCCCCHHHHHHHHHHcccC
Confidence            999999999999999997 77787533221        122222222221         111233467899999999999


Q ss_pred             CCCCCCCCccchhhhhhc
Q 022858          135 PEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~  152 (291)
                      |++||++.|+  ++.|++
T Consensus       273 p~~Rpt~~el--~~~l~~  288 (288)
T cd05050         273 PSDRPSFASI--NRILQR  288 (288)
T ss_pred             cccCCCHHHH--HHHhhC
Confidence            9999999999  888763

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=2.1e-23  Score=182.20  Aligned_cols=122  Identities=21%  Similarity=0.255  Sum_probs=94.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus        96 ~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  172 (312)
T cd05585          96 RFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTK  172 (312)
T ss_pred             HHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCC
Confidence            4578899999999999   99999999999999986542                        67899999999989999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......        ........+..          ..+......+.+++.+||+.||++
T Consensus       173 ~~DvwslGvil~el~tg~~pf~~~~~~--------~~~~~~~~~~~----------~~~~~~~~~~~~li~~~L~~dp~~  234 (312)
T cd05585         173 AVDWWTLGVLLYEMLTGLPPFYDENVN--------EMYRKILQEPL----------RFPDGFDRDAKDLLIGLLSRDPTR  234 (312)
T ss_pred             ccceechhHHHHHHHhCCCCcCCCCHH--------HHHHHHHcCCC----------CCCCcCCHHHHHHHHHHcCCCHHH
Confidence            999999999999999999999654321        11111111110          111223456788999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++..+
T Consensus       235 R~~~~~~  241 (312)
T cd05585         235 RLGYNGA  241 (312)
T ss_pred             cCCCCCH
Confidence            9986555

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.88  E-value=1.3e-23  Score=185.25  Aligned_cols=145  Identities=16%  Similarity=0.195  Sum_probs=98.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccC--
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMS--   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~--   52 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                           ++.|+|||++.+  
T Consensus       106 ~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  182 (338)
T cd07859         106 QFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFF  182 (338)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccc
Confidence            4688999999999999   99999999999999987642                           567999999875  


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHH-----------HHhhcCccchhhh---hcccc---cc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVW-----------KKLEKGEFQDLII---VCGME---KN  115 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~---~~~~~---~~  115 (291)
                      ..++.++|||||||++|||++|+.||.......    ....+.           ..+..........   .....   ..
T Consensus       183 ~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  258 (338)
T cd07859         183 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH----QLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQK  258 (338)
T ss_pred             cccCchhHHHHHHHHHHHHHcCCCCCCCCChHH----HHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHh
Confidence            578999999999999999999999986543210    000000           0000000000000   00000   00


Q ss_pred             hHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          116 NKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       116 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      .+.....+.+++.+||+.||++||++.++.....+.+.
T Consensus       259 ~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~  296 (338)
T cd07859         259 FPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGL  296 (338)
T ss_pred             cCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhc
Confidence            01123567899999999999999999999333344443

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.88  E-value=1.6e-23  Score=184.68  Aligned_cols=133  Identities=23%  Similarity=0.246  Sum_probs=102.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   ++++||||||+|||++.++.                          +..|+|||++.+..+
T Consensus       137 ~~~~~qi~~al~~LH~---~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  213 (334)
T cd05100         137 VSCAYQVARGMEYLAS---QKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVY  213 (334)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCc
Confidence            4578999999999999   99999999999999986532                          246999999998889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||.....        ......+..+...         ..+..+...+.+++.+|++.+
T Consensus       214 ~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~~  276 (334)
T cd05100         214 THQSDVWSFGVLLWEIFTLGGSPYPGIPV--------EELFKLLKEGHRM---------DKPANCTHELYMIMRECWHAV  276 (334)
T ss_pred             CchhhhHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcccC
Confidence            999999999999999998 7788754321        1122222221111         112233467889999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |++||++.++  +..|+.+...
T Consensus       277 p~~Rps~~el--l~~l~~~~~~  296 (334)
T cd05100         277 PSQRPTFKQL--VEDLDRVLTV  296 (334)
T ss_pred             hhhCcCHHHH--HHHHHHHhhh
Confidence            9999999999  9999887643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.88  E-value=1.1e-23  Score=178.50  Aligned_cols=127  Identities=20%  Similarity=0.193  Sum_probs=98.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.|+.|++.||+|||+   .+++||||||+||+++.++.                         +..|+|||.+.+..++
T Consensus       103 ~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~  179 (256)
T cd05059         103 LDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFS  179 (256)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCC
Confidence            5688999999999999   99999999999999986542                         2369999999988899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++||+++ |..||......        ........+.         ....+...+..+.+++.+|++.+|
T Consensus       180 ~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p  242 (256)
T cd05059         180 SKSDVWSFGVLMWEVFSEGKMPYERFSNS--------EVVESVSAGY---------RLYRPKLAPTEVYTIMYSCWHEKP  242 (256)
T ss_pred             chhhHHHHHHHHHHHhccCCCCCCCCCHH--------HHHHHHHcCC---------cCCCCCCCCHHHHHHHHHHhcCCh
Confidence            99999999999999998 78888643321        1111111110         011112345688999999999999


Q ss_pred             CCCCCCCccchhhhh
Q 022858          136 EAMPSMTVRPAKFML  150 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L  150 (291)
                      ++||++.++  ++.|
T Consensus       243 ~~Rpt~~~~--l~~l  255 (256)
T cd05059         243 EDRPAFKKL--LSQL  255 (256)
T ss_pred             hhCcCHHHH--HHHh
Confidence            999999999  7765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.88  E-value=3.9e-23  Score=165.38  Aligned_cols=131  Identities=18%  Similarity=0.153  Sum_probs=95.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------CCccccCccccCCCCccccceech
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------TPGYAAPETWMSFPVTHKCDVRSF   64 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------t~~y~aPE~~~~~~~~~~~Dv~s~   64 (291)
                      +.|+.||+.||+|||+   .+      ||+|||++.++.                 ++.|||||++.+..++.++|||||
T Consensus        20 ~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~fG~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSl   90 (176)
T smart00750       20 WAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKLDGSVAFKTPEQSRVDPYFMAPEVIQGQSYTEKADIYSL   90 (176)
T ss_pred             HHHHHHHHHHHHHHHh---cC------CcccEeEcCccceeeccceEeeccccCCCcccccChHHhcCCCCcchhhHHHH
Confidence            5789999999999999   55      999999986542                 889999999999999999999999


Q ss_pred             hHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHH--HHHHHHHHccccCCCCCCCCC
Q 022858           65 GMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAE--RMALVALWRVQYKPEAMPSMT  142 (291)
Q Consensus        65 G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~cl~~~p~~RPs~~  142 (291)
                      ||++|||++|+.||......   ......+........      + ...........  .+.+++.+|++.+|++||++.
T Consensus        91 G~il~elltg~~p~~~~~~~---~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~  160 (176)
T smart00750       91 GITLYEALDYELPYNEEREL---SAILEILLNGMPADD------P-RDRSNLESVSAARSFADFMRVCASRLPQRREAAN  160 (176)
T ss_pred             HHHHHHHHhCCCCccccchh---cHHHHHHHHHhccCC------c-cccccHHHHHhhhhHHHHHHHHHhcccccccCHH
Confidence            99999999999998644321   111111111111100      0 00011122222  689999999999999999999


Q ss_pred             ccchhhhhhcc
Q 022858          143 VRPAKFMLHGS  153 (291)
Q Consensus       143 ~v~~~~~L~~~  153 (291)
                      ++  +..+...
T Consensus       161 ~l--l~~~~~~  169 (176)
T smart00750      161 HY--LAHCRAL  169 (176)
T ss_pred             HH--HHHHHHH
Confidence            99  7766544

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.88  E-value=1.3e-23  Score=179.61  Aligned_cols=130  Identities=20%  Similarity=0.203  Sum_probs=100.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++++.|++.||+|||+   .+|+||||||+||+++.+..                          ++.|++||.+.+..+
T Consensus       116 ~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~  192 (273)
T cd05074         116 VRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVY  192 (273)
T ss_pred             HHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCcc
Confidence            5688999999999999   99999999999999986543                          257899999988888


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..|+......        .....+.....         ..........+.+++.+|++.+
T Consensus       193 ~~~sDi~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~l~~~  255 (273)
T cd05074         193 TTHSDVWAFGVTMWEIMTRGQTPYAGVENS--------EIYNYLIKGNR---------LKQPPDCLEDVYELMCQCWSPE  255 (273)
T ss_pred             chhhhhHHHHHHHHHHhhCCCCCCCCCCHH--------HHHHHHHcCCc---------CCCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999998 78887543221        11111211110         0111234468899999999999


Q ss_pred             CCCCCCCCccchhhhhhcc
Q 022858          135 PEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~  153 (291)
                      |++||++.++  +..|+++
T Consensus       256 p~~Rps~~~~--~~~l~~~  272 (273)
T cd05074         256 PKCRPSFQHL--RDQLELI  272 (273)
T ss_pred             hhhCcCHHHH--HHHHHhh
Confidence            9999999999  8888754

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.88  E-value=1.1e-23  Score=184.87  Aligned_cols=122  Identities=16%  Similarity=0.190  Sum_probs=94.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus        98 ~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  174 (323)
T cd05571          98 RFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR  174 (323)
T ss_pred             HHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCc
Confidence            3578899999999999   99999999999999986542                        67899999999889999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||+||++|||++|..||......        .....+..+..          ..+......+.+++.+||+.||++
T Consensus       175 ~~DiwSlG~il~elltg~~Pf~~~~~~--------~~~~~~~~~~~----------~~p~~~~~~~~~li~~~L~~dP~~  236 (323)
T cd05571         175 AVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEEI----------RFPRTLSPEAKSLLAGLLKKDPKQ  236 (323)
T ss_pred             cccCcccchhhhhhhcCCCCCCCCCHH--------HHHHHHHcCCC----------CCCCCCCHHHHHHHHHHccCCHHH
Confidence            999999999999999999998654321        11111111111          111223467788999999999999


Q ss_pred             CC-----CCCcc
Q 022858          138 MP-----SMTVR  144 (291)
Q Consensus       138 RP-----s~~~v  144 (291)
                      ||     ++.++
T Consensus       237 R~~~~~~~~~~l  248 (323)
T cd05571         237 RLGGGPEDAKEI  248 (323)
T ss_pred             cCCCCCCCHHHH
Confidence            99     45555

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.88  E-value=1.9e-23  Score=180.07  Aligned_cols=140  Identities=16%  Similarity=0.104  Sum_probs=96.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      ..++.|++.||+|||+   .+|+||||||+||+++.++.                         ++.|+|||++.+..++
T Consensus       103 ~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  179 (287)
T cd07848         103 RSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYG  179 (287)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCC
Confidence            4688999999999999   99999999999999986542                         5679999999888899


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCch-------h-HHHHHHhhcCccchhhhhcccc------cchHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSG-------F-KWVWKKLEKGEFQDLIIVCGME------KNNKEKAER  122 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~  122 (291)
                      .++|||||||++|||++|+.||............       . .+...............+....      .........
T Consensus       180 ~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  259 (287)
T cd07848         180 KAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGV  259 (287)
T ss_pred             CchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHH
Confidence            9999999999999999999999754321100000       0 0000000000000000000000      001123456


Q ss_pred             HHHHHHHccccCCCCCCCCCcc
Q 022858          123 MALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       123 ~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +.+++.+||+.||++|||+.++
T Consensus       260 ~~dll~~~L~~~P~~R~s~~~~  281 (287)
T cd07848         260 LLDLMKNLLKLNPTDRYLTEQC  281 (287)
T ss_pred             HHHHHHHHccCCcccCCCHHHH
Confidence            8999999999999999999888

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.88  E-value=3.4e-23  Score=177.82  Aligned_cols=127  Identities=23%  Similarity=0.268  Sum_probs=95.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.+..                       +..|+|||++.+..++.+
T Consensus        98 ~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  174 (277)
T cd05607          98 IHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYP  174 (277)
T ss_pred             HHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCc
Confidence            4578899999999999   99999999999999986543                       678999999988889999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +||||+||++|||++|+.||......   ..... +..........         .........+.+++..||+.||++|
T Consensus       175 ~DvwslGv~l~el~~g~~p~~~~~~~---~~~~~-~~~~~~~~~~~---------~~~~~~~~~~~~li~~~L~~~P~~R  241 (277)
T cd05607         175 VDWFAMGCSIYEMVAGRTPFKDHKEK---VAKEE-LKRRTLEDEVK---------FEHQNFTEESKDICRLFLAKKPEDR  241 (277)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCcch---hhHHH-HHHHhhccccc---------cccccCCHHHHHHHHHHhccCHhhC
Confidence            99999999999999999998643321   00011 11111111100         0111234567899999999999999


Q ss_pred             CCCCcc
Q 022858          139 PSMTVR  144 (291)
Q Consensus       139 Ps~~~v  144 (291)
                      |++.|+
T Consensus       242 ~~~~~~  247 (277)
T cd05607         242 LGSREK  247 (277)
T ss_pred             CCCccc
Confidence            999877

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.88  E-value=2.2e-23  Score=176.51  Aligned_cols=129  Identities=22%  Similarity=0.267  Sum_probs=100.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCccccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      ++++.|++.||.|||+   .+++||||||+||+++.++.                     +..|+|||.+.+..++.++|
T Consensus       103 ~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~D  179 (254)
T cd05083         103 LQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSD  179 (254)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhh
Confidence            5688999999999999   99999999999999986543                     45699999998888999999


Q ss_pred             eechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           61 VRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        61 v~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      +||||+++|||++ |..||......        ........+...         ......+..+.+++.+||+.+|++||
T Consensus       180 v~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp  242 (254)
T cd05083         180 VWSYGVLLWEVFSYGRAPYPKMSLK--------EVKECVEKGYRM---------EPPEGCPADVYVLMTSCWETEPKKRP  242 (254)
T ss_pred             HHHHHHHHHHHHhCCCCCCccCCHH--------HHHHHHhCCCCC---------CCCCcCCHHHHHHHHHHcCCChhhCc
Confidence            9999999999997 88888644321        112222221111         11123346788999999999999999


Q ss_pred             CCCccchhhhhhc
Q 022858          140 SMTVRPAKFMLHG  152 (291)
Q Consensus       140 s~~~v~~~~~L~~  152 (291)
                      ++.++  +..|+.
T Consensus       243 ~~~~l--~~~l~~  253 (254)
T cd05083         243 SFHKL--REKLEK  253 (254)
T ss_pred             CHHHH--HHHHcc
Confidence            99999  887754

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.88  E-value=3.5e-23  Score=184.17  Aligned_cols=74  Identities=35%  Similarity=0.415  Sum_probs=66.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.|+.||+.||.|||+   ++|+||||||+|||++.+..                       ++.|+|||++.+..++.+
T Consensus       160 ~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  236 (357)
T PHA03209        160 LIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSK  236 (357)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCccccccccCcccccccccccccCCeecCCCCCCch
Confidence            5789999999999999   99999999999999986542                       678999999999899999


Q ss_pred             cceechhHHHHHHhhCCCcc
Q 022858           59 CDVRSFGMLLFEILGRRRMR   78 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~   78 (291)
                      +|||||||++|||+++..++
T Consensus       237 ~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        237 ADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             hhHHHHHHHHHHHHHcCCcc
Confidence            99999999999999866554

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.88  E-value=2.1e-23  Score=177.24  Aligned_cols=129  Identities=26%  Similarity=0.283  Sum_probs=100.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.+..                         +..|+|||++....++
T Consensus       105 ~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~  181 (260)
T cd05067         105 IDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT  181 (260)
T ss_pred             HHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcC
Confidence            4688999999999999   99999999999999986643                         3469999999888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++||+++ |+.||......        ........+..         .+.+...+..+.+++.+|++.+|
T Consensus       182 ~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p  244 (260)
T cd05067         182 IKSDVWSFGILLTEIVTYGRIPYPGMTNP--------EVIQNLERGYR---------MPRPDNCPEELYELMRLCWKEKP  244 (260)
T ss_pred             cccchHHHHHHHHHHHhCCCCCCCCCChH--------HHHHHHHcCCC---------CCCCCCCCHHHHHHHHHHccCCh
Confidence            99999999999999998 99998644321        11111211110         11112234678999999999999


Q ss_pred             CCCCCCCccchhhhhhc
Q 022858          136 EAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~  152 (291)
                      ++||++.++  +..|+.
T Consensus       245 ~~Rp~~~~l--~~~l~~  259 (260)
T cd05067         245 EERPTFEYL--RSVLED  259 (260)
T ss_pred             hhCCCHHHH--HHHhhc
Confidence            999999999  887754

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.88  E-value=4.8e-23  Score=188.03  Aligned_cols=140  Identities=17%  Similarity=0.138  Sum_probs=96.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||+|||+   .+||||||||+|||++.++.                          |+.|+|||++.+..+
T Consensus       263 ~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~  339 (461)
T PHA03211        263 TAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPY  339 (461)
T ss_pred             HHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCC
Confidence            5789999999999999   99999999999999986432                          778999999999899


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCcc-----chh-----hh-----------hccccc
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEF-----QDL-----II-----------VCGMEK  114 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-----~~-----------~~~~~~  114 (291)
                      +.++|||||||++|||++|..++...............+...+.....     ...     ..           +.....
T Consensus       340 ~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  419 (461)
T PHA03211        340 TPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRP  419 (461)
T ss_pred             CchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCc
Confidence            999999999999999999876654332211111122222222222111     000     00           000000


Q ss_pred             chH---HHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          115 NNK---EKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       115 ~~~---~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ...   .....+.+|+.+||+.||.+|||+.|+
T Consensus       420 ~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~el  452 (461)
T PHA03211        420 AWTRYYKLDLDVEYLVCRALTFDGARRPSAAEL  452 (461)
T ss_pred             chhhhccccchHHHHHHHHcccChhhCcCHHHH
Confidence            000   112367789999999999999999999

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.88  E-value=1.8e-23  Score=188.22  Aligned_cols=132  Identities=20%  Similarity=0.232  Sum_probs=102.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++++.|++.||+|||+   .+|+||||||+|||++.+..                          +..|+|||.+.+..+
T Consensus       240 ~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  316 (400)
T cd05105         240 LSFTYQVARGMEFLAS---KNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLY  316 (400)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCC
Confidence            5688999999999999   99999999999999986532                          356999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||++ |..|+......       .........+.         ....+...+..+.+++.+||+.+
T Consensus       317 ~~~~DiwSlGvil~ellt~g~~P~~~~~~~-------~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~cl~~d  380 (400)
T cd05105         317 TTLSDVWSYGILLWEIFSLGGTPYPGMIVD-------STFYNKIKSGY---------RMAKPDHATQEVYDIMVKCWNSE  380 (400)
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCCcccchh-------HHHHHHHhcCC---------CCCCCccCCHHHHHHHHHHCccC
Confidence            999999999999999997 88887644321       11111121111         01112234567899999999999


Q ss_pred             CCCCCCCCccchhhhhhccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~  154 (291)
                      |++||++.++  .+.|+...
T Consensus       381 P~~RPt~~~l--~~~l~~l~  398 (400)
T cd05105         381 PEKRPSFLHL--SDIVESLL  398 (400)
T ss_pred             HhHCcCHHHH--HHHHHHHc
Confidence            9999999999  98887653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.88  E-value=2.3e-23  Score=180.43  Aligned_cols=135  Identities=16%  Similarity=0.132  Sum_probs=98.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+++|+||||+|||++.++.                          ++.|++||....+.+
T Consensus       133 ~~~~~~i~~al~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~  209 (296)
T cd05095         133 IFMATQIASGMKYLSS---LNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKF  209 (296)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCc
Confidence            5688999999999999   99999999999999985432                          246999998888889


Q ss_pred             ccccceechhHHHHHHhh--CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           56 THKCDVRSFGMLLFEILG--RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      +.++|||||||++|||++  |..|+.......    ................      ..+.+..++..+.+++.+||+.
T Consensus       210 ~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~cl~~  279 (296)
T cd05095         210 TTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ----VIENTGEFFRDQGRQV------YLPKPALCPDSLYKLMLSCWRR  279 (296)
T ss_pred             cchhhhhHHHHHHHHHHHhCCCCCccccChHH----HHHHHHHHHhhccccc------cCCCCCCCCHHHHHHHHHHcCC
Confidence            999999999999999998  667775433211    1111111111000000      0111223447788999999999


Q ss_pred             CCCCCCCCCccchhhhhh
Q 022858          134 KPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~  151 (291)
                      ||++||++.+|  ++.|+
T Consensus       280 ~p~~Rp~~~~i--~~~l~  295 (296)
T cd05095         280 NAKERPSFQEI--HATLL  295 (296)
T ss_pred             CcccCCCHHHH--HHHHh
Confidence            99999999999  88775

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.88  E-value=1.6e-23  Score=193.09  Aligned_cols=123  Identities=21%  Similarity=0.297  Sum_probs=96.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                          |+.|+|||++.+..+
T Consensus       172 ~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  248 (478)
T PTZ00267        172 GLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRY  248 (478)
T ss_pred             HHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCC
Confidence            3578899999999999   99999999999999986542                          667999999998899


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++|||||||++|||++|+.||......        .+......+...         +.+......+.+++.+||+.+|
T Consensus       249 ~~~~Dv~slG~~l~el~tg~~Pf~~~~~~--------~~~~~~~~~~~~---------~~~~~~s~~~~~li~~~L~~dP  311 (478)
T PTZ00267        249 SKKADMWSLGVILYELLTLHRPFKGPSQR--------EIMQQVLYGKYD---------PFPCPVSSGMKALLDPLLSKNP  311 (478)
T ss_pred             CcHHhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCC---------CCCccCCHHHHHHHHHHhccCh
Confidence            99999999999999999999998643321        111222111111         1112234678899999999999


Q ss_pred             CCCCCCCcc
Q 022858          136 EAMPSMTVR  144 (291)
Q Consensus       136 ~~RPs~~~v  144 (291)
                      ++||++.++
T Consensus       312 ~~Rps~~~~  320 (478)
T PTZ00267        312 ALRPTTQQL  320 (478)
T ss_pred             hhCcCHHHH
Confidence            999999988

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.88  E-value=2.9e-23  Score=175.62  Aligned_cols=123  Identities=23%  Similarity=0.276  Sum_probs=97.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||.|||+   .+++|+||||+||+++.+..                        ++.|+|||+..+..++.
T Consensus       104 ~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  180 (256)
T cd08529         104 WRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNE  180 (256)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCC
Confidence            4688999999999999   99999999999999987543                        46799999999888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|+||||+++|||++|+.||......        ........+...         .........+.+++.+|++.+|++
T Consensus       181 ~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~~p~~  243 (256)
T cd08529         181 KSDVWALGVVLYECCTGKHPFDANNQG--------ALILKIIRGVFP---------PVSQMYSQQLAQLIDQCLTKDYRQ  243 (256)
T ss_pred             ccchHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCC---------CCccccCHHHHHHHHHHccCCccc
Confidence            999999999999999999998644321        111222222111         111234467899999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       244 Rp~~~~l  250 (256)
T cd08529         244 RPDTFQL  250 (256)
T ss_pred             CcCHHHH
Confidence            9999988

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.88  E-value=2.1e-23  Score=181.40  Aligned_cols=131  Identities=18%  Similarity=0.227  Sum_probs=100.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+|+|+||||+|||++.+..                          +..|+|||++.+..+
T Consensus       144 ~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  220 (302)
T cd05055         144 LSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVY  220 (302)
T ss_pred             HHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCC
Confidence            5688999999999999   99999999999999986532                          246999999998889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++||+++ |..||......       .........+.         ....+......+.+++.+|++.+
T Consensus       221 ~~~~DiwslGvil~el~t~g~~p~~~~~~~-------~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~cl~~~  284 (302)
T cd05055         221 TFESDVWSYGILLWEIFSLGSNPYPGMPVD-------SKFYKLIKEGY---------RMAQPEHAPAEIYDIMKTCWDAD  284 (302)
T ss_pred             CcHhHHHHHHHHHHHHHhCCCCCcCCCCch-------HHHHHHHHcCC---------cCCCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999998 89887644321       11111111111         00111122357889999999999


Q ss_pred             CCCCCCCCccchhhhhhcc
Q 022858          135 PEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~  153 (291)
                      |++||++.++  ++.|++.
T Consensus       285 p~~Rpt~~el--l~~l~~~  301 (302)
T cd05055         285 PLKRPTFKQI--VQLIGKQ  301 (302)
T ss_pred             chhCcCHHHH--HHHHHhh
Confidence            9999999999  8888653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.88  E-value=3.7e-23  Score=179.13  Aligned_cols=135  Identities=14%  Similarity=0.129  Sum_probs=98.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++++.|++.||+|||+   .+++||||||+||+++.+..                          +..|+|||++.+..+
T Consensus       132 ~~i~~~i~~al~~lH~---~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  208 (295)
T cd05097         132 LYMAVQIASGMKYLAS---LNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKF  208 (295)
T ss_pred             HHHHHHHHHHHHHHHh---cCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCc
Confidence            5688999999999999   99999999999999986542                          346999999988889


Q ss_pred             ccccceechhHHHHHHhh--CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           56 THKCDVRSFGMLLFEILG--RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      +.++||||||+++|||++  +..||......    .......+.........      ....+...+..+.+++.+|++.
T Consensus       209 ~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~  278 (295)
T cd05097         209 TTASDVWAFGVTLWEMFTLCKEQPYSLLSDE----QVIENTGEFFRNQGRQI------YLSQTPLCPSPVFKLMMRCWSR  278 (295)
T ss_pred             CchhhHHHHHHHHHHHHHcCCCCCCcccChH----HHHHHHHHhhhhccccc------cCCCCCCCCHHHHHHHHHHcCC
Confidence            999999999999999998  55566543221    01111111111100000      0011112346899999999999


Q ss_pred             CCCCCCCCCccchhhhhh
Q 022858          134 KPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~  151 (291)
                      +|++||++.+|  ++.|+
T Consensus       279 ~p~~RPs~~~i--~~~l~  294 (295)
T cd05097         279 DIKDRPTFNKI--HHFLR  294 (295)
T ss_pred             CchhCcCHHHH--HHHHh
Confidence            99999999999  88875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.88  E-value=1.4e-23  Score=184.53  Aligned_cols=77  Identities=19%  Similarity=0.211  Sum_probs=67.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------------CCccccCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------------TPGYAAPETW   50 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------------t~~y~aPE~~   50 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                               +..|+|||++
T Consensus       104 ~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  180 (327)
T cd08227         104 AYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVL  180 (327)
T ss_pred             HHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHh
Confidence            5688999999999999   99999999999999975432                               3459999998


Q ss_pred             cC--CCCccccceechhHHHHHHhhCCCccccc
Q 022858           51 MS--FPVTHKCDVRSFGMLLFEILGRRRMRTCQ   81 (291)
Q Consensus        51 ~~--~~~~~~~Dv~s~G~~l~elltg~~p~~~~   81 (291)
                      .+  ..++.++|||||||++|||++|+.||...
T Consensus       181 ~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  213 (327)
T cd08227         181 QQNLQGYDAKSDIYSVGITACELANGHVPFKDM  213 (327)
T ss_pred             hcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence            76  46889999999999999999999999653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.88  E-value=3.2e-23  Score=175.47  Aligned_cols=128  Identities=25%  Similarity=0.256  Sum_probs=100.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ..++.|++.||+|||+   .+++|+||||+||+++.+..                          ++.|+|||.+....+
T Consensus       108 ~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  184 (262)
T cd00192         108 LSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIF  184 (262)
T ss_pred             HHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCc
Confidence            5789999999999999   99999999999999997543                          567999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||+|+++|||++ |..||......        ........+..         ...+...+..+.+++.+|++.+
T Consensus       185 ~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~  247 (262)
T cd00192         185 TSKSDVWSFGVLLWEIFTLGATPYPGLSNE--------EVLEYLRKGYR---------LPKPEYCPDELYELMLSCWQLD  247 (262)
T ss_pred             chhhccHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCC---------CCCCccCChHHHHHHHHHccCC
Confidence            999999999999999998 58888655321        12222222111         1112233578899999999999


Q ss_pred             CCCCCCCCccchhhhhh
Q 022858          135 PEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~  151 (291)
                      |++||++.++  +..|+
T Consensus       248 p~~Rps~~~l--~~~l~  262 (262)
T cd00192         248 PEDRPTFSEL--VERLE  262 (262)
T ss_pred             cccCcCHHHH--HHhhC
Confidence            9999999999  77663

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.88  E-value=1.2e-23  Score=181.04  Aligned_cols=142  Identities=16%  Similarity=0.184  Sum_probs=99.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.++.                           +..|+|||++.+..
T Consensus       111 ~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  187 (284)
T cd05081         111 LLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESK  187 (284)
T ss_pred             HHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCC
Confidence            4688999999999999   99999999999999986543                           12499999998888


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhh----cCccchhhhhcccccchHHHHHHHHHHHHHc
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLE----KGEFQDLIIVCGMEKNNKEKAERMALVALWR  130 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c  130 (291)
                      ++.++||||||+++|||++|..+.......     ..........    ...+.+.+......+.....+..+.+++.+|
T Consensus       188 ~~~~~Di~slG~~l~el~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  262 (284)
T cd05081         188 FSVASDVWSFGVVLYELFTYSDKSCSPPAE-----FMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKEC  262 (284)
T ss_pred             cChHHHHHHHHHHHHHHhhcCCcCCCcchh-----hhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999987664322110     0000000000    0000011111111112233456789999999


Q ss_pred             cccCCCCCCCCCccchhhhhhcc
Q 022858          131 VQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       131 l~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      |+.+|++|||+.++  +..|+.+
T Consensus       263 l~~~p~~Rpt~~ei--~~~l~~~  283 (284)
T cd05081         263 WNNDPSQRPSFSEL--ALQVEAI  283 (284)
T ss_pred             ccCChhhCCCHHHH--HHHHHhc
Confidence            99999999999999  9988764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.88  E-value=5.8e-23  Score=175.03  Aligned_cols=133  Identities=20%  Similarity=0.293  Sum_probs=100.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.++.                        +..|+|||.+.+..++.
T Consensus       109 ~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~  185 (267)
T cd08229         109 WKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF  185 (267)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccc
Confidence            4678999999999999   99999999999999986543                        45799999998888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|+||||+++|||++|..|+......     .. ...+........        ..........+.+++.+|++.+|++
T Consensus       186 ~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~-~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~  251 (267)
T cd08229         186 KSDIWSLGCLLYEMAALQSPFYGDKMN-----LY-SLCKKIEQCDYP--------PLPSDHYSEELRQLVNMCINPDPEK  251 (267)
T ss_pred             hhhHHHHHHHHHHHHhCCCCcccccch-----HH-HHhhhhhcCCCC--------CCCcccccHHHHHHHHHhcCCCccc
Confidence            999999999999999999998643221     00 111111111110        0111234567889999999999999


Q ss_pred             CCCCCccchhhhhhcc
Q 022858          138 MPSMTVRPAKFMLHGS  153 (291)
Q Consensus       138 RPs~~~v~~~~~L~~~  153 (291)
                      |||+.+|  ++.+.+.
T Consensus       252 Rpt~~~i--~~~~~~~  265 (267)
T cd08229         252 RPDITYV--YDVAKRM  265 (267)
T ss_pred             CCCHHHH--HHHHhhh
Confidence            9999999  7777653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.88  E-value=5.5e-23  Score=174.96  Aligned_cols=133  Identities=22%  Similarity=0.317  Sum_probs=102.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.+++.||.|||+   .+++|+||||+||+++.++.                        ++.|+|||.+.+..++.
T Consensus       109 ~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~  185 (267)
T cd08224         109 WKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF  185 (267)
T ss_pred             HHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCc
Confidence            5678999999999999   99999999999999986543                        55799999998888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|+|++|+.|+......     ... .......+.....        ........+.+++.+|++.+|++
T Consensus       186 ~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~-~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~cl~~~p~~  251 (267)
T cd08224         186 KSDIWSLGCLLYEMAALQSPFYGDKMN-----LYS-LCKKIEKCDYPPL--------PADHYSEELRDLVSRCINPDPEK  251 (267)
T ss_pred             hhcHHHHHHHHHHHHHCCCCcccCCcc-----HHH-HHhhhhcCCCCCC--------ChhhcCHHHHHHHHHHcCCCccc
Confidence            999999999999999999998544311     111 1111111111111        11234567889999999999999


Q ss_pred             CCCCCccchhhhhhcc
Q 022858          138 MPSMTVRPAKFMLHGS  153 (291)
Q Consensus       138 RPs~~~v~~~~~L~~~  153 (291)
                      ||++.+|  +++|++.
T Consensus       252 Rp~~~~i--l~~~~~~  265 (267)
T cd08224         252 RPDISYV--LQVAKEM  265 (267)
T ss_pred             CCCHHHH--HHHHHHh
Confidence            9999999  9888765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.88  E-value=3.4e-23  Score=181.74  Aligned_cols=120  Identities=23%  Similarity=0.295  Sum_probs=94.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus       104 ~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  180 (323)
T cd05616         104 VFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGK  180 (323)
T ss_pred             HHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCC
Confidence            4688999999999999   99999999999999986542                        67899999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......        .....+.....          ..+......+.+++.+|++.+|++
T Consensus       181 ~~DiwSlGvil~elltg~~Pf~~~~~~--------~~~~~i~~~~~----------~~p~~~s~~~~~li~~~l~~~p~~  242 (323)
T cd05616         181 SVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIMEHNV----------AYPKSMSKEAVAICKGLMTKHPGK  242 (323)
T ss_pred             ccchhchhHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCC----------CCCCcCCHHHHHHHHHHcccCHHh
Confidence            999999999999999999999754321        11222222111          111223467789999999999999


Q ss_pred             CCCCC
Q 022858          138 MPSMT  142 (291)
Q Consensus       138 RPs~~  142 (291)
                      |++..
T Consensus       243 R~~~~  247 (323)
T cd05616         243 RLGCG  247 (323)
T ss_pred             cCCCC
Confidence            99863

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.87  E-value=3.5e-23  Score=181.10  Aligned_cols=122  Identities=21%  Similarity=0.222  Sum_probs=94.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (316)
T cd05592          99 RFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNE  175 (316)
T ss_pred             HHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCC
Confidence            3578999999999999   99999999999999986542                        77899999999888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......        .....+....          ...+......+.+++.+||+.+|++
T Consensus       176 ~~DvwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~~----------~~~~~~~~~~~~~ll~~~l~~~P~~  237 (316)
T cd05592         176 SVDWWSFGVLLYEMLIGQSPFHGEDED--------ELFDSILNDR----------PHFPRWISKEAKDCLSKLFERDPTK  237 (316)
T ss_pred             cccchhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCC----------CCCCCCCCHHHHHHHHHHccCCHHH
Confidence            999999999999999999999754321        1111111110          0111223456788999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.+.
T Consensus       238 R~~~~~~  244 (316)
T cd05592         238 RLGVDGD  244 (316)
T ss_pred             cCCChHH
Confidence            9998643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.87  E-value=5.1e-23  Score=176.49  Aligned_cols=125  Identities=22%  Similarity=0.209  Sum_probs=93.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC--------------C-------------CCccccCccccC-C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--------------W-------------TPGYAAPETWMS-F   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~--------------~-------------t~~y~aPE~~~~-~   53 (291)
                      +.++.||+.||+|||+   .+|+||||||+|||++..+              +             +..|+|||.+.+ .
T Consensus       120 ~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~  196 (274)
T cd05076         120 ITVAQQLASALSYLED---KNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGN  196 (274)
T ss_pred             HHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccCcccCccceeeecCCccccccccccccccCCcccCchhhcCCC
Confidence            5789999999999999   9999999999999997421              1             567999998875 5


Q ss_pred             CCccccceechhHHHHHHh-hCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           54 PVTHKCDVRSFGMLLFEIL-GRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      .++.++||||||+++||++ +|..|+.......     ..   ......         .  ..+......+.+++.+||+
T Consensus       197 ~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-----~~---~~~~~~---------~--~~~~~~~~~~~~li~~cl~  257 (274)
T cd05076         197 SLSTAADKWSFGTTLLEICFDGEVPLKERTPSE-----KE---RFYEKK---------H--RLPEPSCKELATLISQCLT  257 (274)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCccccChHH-----HH---HHHHhc---------c--CCCCCCChHHHHHHHHHcc
Confidence            6889999999999999985 7888886543210     00   011100         0  0001112467889999999


Q ss_pred             cCCCCCCCCCccchhhhh
Q 022858          133 YKPEAMPSMTVRPAKFML  150 (291)
Q Consensus       133 ~~p~~RPs~~~v~~~~~L  150 (291)
                      .+|++||++.++  ++.|
T Consensus       258 ~~p~~Rps~~~i--l~~L  273 (274)
T cd05076         258 YEPTQRPSFRTI--LRDL  273 (274)
T ss_pred             cChhhCcCHHHH--HHhh
Confidence            999999999999  8776

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.87  E-value=3.5e-23  Score=175.35  Aligned_cols=129  Identities=22%  Similarity=0.252  Sum_probs=100.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCccccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      ..++.|++.||.|||+   .+++|+||||+||+++.++.                     +..|+|||++....++.++|
T Consensus       105 ~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~D  181 (256)
T cd05039         105 LGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSD  181 (256)
T ss_pred             HHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEcccccccccccccccCCCcccccCchhhcCCcCCcHHH
Confidence            5688999999999999   99999999999999987653                     44699999998888999999


Q ss_pred             eechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           61 VRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        61 v~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      |||||+++||+++ |..||......        .+......+..         ...+...+..+.+++.+|+..+|++||
T Consensus       182 i~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp  244 (256)
T cd05039         182 VWSFGILLWEIYSFGRVPYPRIPLK--------DVVPHVEKGYR---------MEAPEGCPPEVYKVMKDCWELDPAKRP  244 (256)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHhcCCC---------CCCccCCCHHHHHHHHHHhccChhhCc
Confidence            9999999999997 88887544221        12222221111         111122346788999999999999999


Q ss_pred             CCCccchhhhhhc
Q 022858          140 SMTVRPAKFMLHG  152 (291)
Q Consensus       140 s~~~v~~~~~L~~  152 (291)
                      ++.++  +.+|+.
T Consensus       245 ~~~~l--~~~l~~  255 (256)
T cd05039         245 TFKQL--REQLAL  255 (256)
T ss_pred             CHHHH--HHHHhc
Confidence            99999  888865

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.87  E-value=4.7e-23  Score=180.82  Aligned_cols=122  Identities=22%  Similarity=0.225  Sum_probs=95.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (323)
T cd05575          99 RFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDR  175 (323)
T ss_pred             HHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCc
Confidence            3578999999999999   99999999999999986542                        66899999999889999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|..||......        .....+..+..          .........+.+++.+|++.||++
T Consensus       176 ~~DvwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~  237 (323)
T cd05575         176 TVDWWCLGAVLYEMLYGLPPFYSRDTA--------EMYDNILNKPL----------RLKPNISVSARHLLEGLLQKDRTK  237 (323)
T ss_pred             cccccccchhhhhhhcCCCCCCCCCHH--------HHHHHHHcCCC----------CCCCCCCHHHHHHHHHHhhcCHHh
Confidence            999999999999999999998654321        11111111110          011122467788999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.+.
T Consensus       238 R~~~~~~  244 (323)
T cd05575         238 RLGAKDD  244 (323)
T ss_pred             CCCCCCC
Confidence            9999755

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.2e-22  Score=182.61  Aligned_cols=126  Identities=25%  Similarity=0.306  Sum_probs=101.6

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEc-cCCC---------------------CCccccCccccCCCCccccc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD-VKFW---------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~-~~~~---------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      .|+.+|+.|+.|||+   +++|||||||+|||++ ..+.                     |..|.|||++....|+.++|
T Consensus       419 ~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD  495 (612)
T KOG0603|consen  419 QWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACD  495 (612)
T ss_pred             HHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcchh
Confidence            589999999999999   9999999999999995 4432                     77899999999999999999


Q ss_pred             eechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCC
Q 022858           61 VRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPS  140 (291)
Q Consensus        61 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs  140 (291)
                      +||||++||+|++|+.||......       ..+...+..+.+.            ........+|+.+||+.||.+||+
T Consensus       496 ~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s------------~~vS~~AKdLl~~LL~~dP~~Rl~  556 (612)
T KOG0603|consen  496 WWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFS------------ECVSDEAKDLLQQLLQVDPALRLG  556 (612)
T ss_pred             hHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccc------------cccCHHHHHHHHHhccCChhhCcC
Confidence            999999999999999999766543       2233334333222            222356678889999999999999


Q ss_pred             CCccchhhhh
Q 022858          141 MTVRPAKFML  150 (291)
Q Consensus       141 ~~~v~~~~~L  150 (291)
                      |.+++...++
T Consensus       557 ~~~i~~h~w~  566 (612)
T KOG0603|consen  557 ADEIGAHPWF  566 (612)
T ss_pred             hhhhccCcch
Confidence            9999544444

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.87  E-value=3.6e-23  Score=183.06  Aligned_cols=133  Identities=24%  Similarity=0.240  Sum_probs=101.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.+..                          +..|+|||.+.+..+
T Consensus       182 ~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  258 (343)
T cd05103         182 ICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY  258 (343)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCC
Confidence            4688999999999999   99999999999999986543                          246999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++||+++ |..|+......       .........+....         .+......+.+++..||+.+
T Consensus       259 ~~~~Di~slG~~l~el~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~cl~~~  322 (343)
T cd05103         259 TIQSDVWSFGVLLWEIFSLGASPYPGVKID-------EEFCRRLKEGTRMR---------APDYTTPEMYQTMLDCWHGE  322 (343)
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCCCCcccc-------HHHHHHHhccCCCC---------CCCCCCHHHHHHHHHHccCC
Confidence            999999999999999996 88887543221       11111222211111         01112346889999999999


Q ss_pred             CCCCCCCCccchhhhhhcccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      |++||++.++  ++.|+...+
T Consensus       323 p~~Rps~~ei--l~~l~~~~~  341 (343)
T cd05103         323 PSQRPTFSEL--VEHLGNLLQ  341 (343)
T ss_pred             hhhCcCHHHH--HHHHHHHHh
Confidence            9999999999  998887654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.87  E-value=3.9e-23  Score=176.45  Aligned_cols=130  Identities=19%  Similarity=0.194  Sum_probs=99.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------CCccccCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------TPGYAAPETWMS   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------t~~y~aPE~~~~   52 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.+..                             +..|+|||++.+
T Consensus       109 ~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  185 (269)
T cd05065         109 VGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY  185 (269)
T ss_pred             HHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhcc
Confidence            5688999999999999   99999999999999986532                             125999999988


Q ss_pred             CCCccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcc
Q 022858           53 FPVTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRV  131 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  131 (291)
                      ..++.++||||||+++||+++ |..||......        .....+....         ..+.+.+++..+.+++..||
T Consensus       186 ~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--------~~~~~i~~~~---------~~~~~~~~~~~~~~li~~~l  248 (269)
T cd05065         186 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------DVINAIEQDY---------RLPPPMDCPTALHQLMLDCW  248 (269)
T ss_pred             CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--------HHHHHHHcCC---------cCCCcccCCHHHHHHHHHHc
Confidence            889999999999999999886 99888644321        1111111110         01112234567889999999


Q ss_pred             ccCCCCCCCCCccchhhhhhcc
Q 022858          132 QYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       132 ~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      +.+|++||++.++  +..|+..
T Consensus       249 ~~~p~~Rp~~~~i--~~~l~~~  268 (269)
T cd05065         249 QKDRNARPKFGQI--VSTLDKM  268 (269)
T ss_pred             CCChhhCcCHHHH--HHHHHhh
Confidence            9999999999999  8887654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.87  E-value=4.9e-23  Score=180.09  Aligned_cols=78  Identities=27%  Similarity=0.393  Sum_probs=66.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccC----C-------C--------------------CCccccCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK----F-------W--------------------TPGYAAPETW   50 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~----~-------~--------------------t~~y~aPE~~   50 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.+    +       +                    |+.|+|||++
T Consensus       111 ~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~  187 (317)
T cd07868         111 KSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL  187 (317)
T ss_pred             HHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHH
Confidence            3588999999999999   999999999999999421    1       0                    5679999998


Q ss_pred             cCC-CCccccceechhHHHHHHhhCCCcccccc
Q 022858           51 MSF-PVTHKCDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        51 ~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                      .+. .++.++||||+||++|||++|++||....
T Consensus       188 ~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~  220 (317)
T cd07868         188 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  220 (317)
T ss_pred             cCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence            764 58899999999999999999999996543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.87  E-value=4.6e-23  Score=180.39  Aligned_cols=122  Identities=21%  Similarity=0.240  Sum_probs=94.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (316)
T cd05620          99 TFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTF  175 (316)
T ss_pred             HHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCc
Confidence            3578899999999999   99999999999999986542                        67899999999889999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||+||++|||++|..||......        .....+....          ...+......+.+++.+|++.||++
T Consensus       176 ~~DiwslGvil~el~~g~~Pf~~~~~~--------~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~~dP~~  237 (316)
T cd05620         176 SVDWWSFGVLLYEMLIGQSPFHGDDED--------ELFESIRVDT----------PHYPRWITKESKDILEKLFERDPTR  237 (316)
T ss_pred             ccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCC----------CCCCCCCCHHHHHHHHHHccCCHHH
Confidence            999999999999999999999654321        1111111110          0111123356788999999999999


Q ss_pred             CCCCC-cc
Q 022858          138 MPSMT-VR  144 (291)
Q Consensus       138 RPs~~-~v  144 (291)
                      ||++. ++
T Consensus       238 R~~~~~~~  245 (316)
T cd05620         238 RLGVVGNI  245 (316)
T ss_pred             cCCChHHH
Confidence            99985 45

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.87  E-value=5.9e-23  Score=200.04  Aligned_cols=121  Identities=21%  Similarity=0.250  Sum_probs=89.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc-------------------C------------------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV-------------------K------------------------   38 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~-------------------~------------------------   38 (291)
                      +.|+.||+.||+|||+   ++|+||||||+||||+.                   +                        
T Consensus        83 ~~i~~qi~~al~~lH~---~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~  159 (793)
T PLN00181         83 FHVFRQIVEIVNAAHS---QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEK  159 (793)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhh
Confidence            5688999999999999   99999999999999942                   0                        


Q ss_pred             ----------------CCCCccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCc
Q 022858           39 ----------------FWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGE  102 (291)
Q Consensus        39 ----------------~~t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  102 (291)
                                      .+|+.|||||++.+..++.++|||||||+||||++|..|+.....          ....+....
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~----------~~~~~~~~~  229 (793)
T PLN00181        160 LEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR----------TMSSLRHRV  229 (793)
T ss_pred             hhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH----------HHHHHHHhh
Confidence                            014459999999999999999999999999999998887542211          001111100


Q ss_pred             cchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          103 FQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +    .+     ...........++.+||+.+|.+||+|.|+
T Consensus       230 ~----~~-----~~~~~~~~~~~~~~~~L~~~P~~Rps~~ei  262 (793)
T PLN00181        230 L----PP-----QILLNWPKEASFCLWLLHPEPSCRPSMSEL  262 (793)
T ss_pred             c----Ch-----hhhhcCHHHHHHHHHhCCCChhhCcChHHH
Confidence            0    01     011122345678889999999999999999

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.87  E-value=3.5e-23  Score=181.78  Aligned_cols=126  Identities=21%  Similarity=0.232  Sum_probs=97.1

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCccc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      .++.||+.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.+
T Consensus       100 ~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  176 (325)
T cd05602         100 FYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRT  176 (325)
T ss_pred             HHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCc
Confidence            478999999999999   99999999999999986532                        678999999999899999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|||||||++|||++|..||......       . ....+.....          .........+.+++.+|++.+|.+|
T Consensus       177 ~DiwslG~il~el~~g~~pf~~~~~~-------~-~~~~i~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~R  238 (325)
T cd05602         177 VDWWCLGAVLYEMLYGLPPFYSRNTA-------E-MYDNILNKPL----------QLKPNITNSARHLLEGLLQKDRTKR  238 (325)
T ss_pred             cccccccHHHHHHhcCCCCCCCCCHH-------H-HHHHHHhCCc----------CCCCCCCHHHHHHHHHHcccCHHHC
Confidence            99999999999999999999654321       1 1111111100          1112234567889999999999999


Q ss_pred             CCCCccchhhhhh
Q 022858          139 PSMTVRPAKFMLH  151 (291)
Q Consensus       139 Ps~~~v~~~~~L~  151 (291)
                      |++.+.  +..+.
T Consensus       239 ~~~~~~--~~~i~  249 (325)
T cd05602         239 LGAKDD--FMEIK  249 (325)
T ss_pred             CCCCCC--HHHHh
Confidence            999876  54443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.87  E-value=6.7e-23  Score=173.58  Aligned_cols=123  Identities=21%  Similarity=0.340  Sum_probs=96.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ++++.+++.||+|||+   .+++|+||||+||+++.++.                        ++.|+|||++.+..++.
T Consensus       105 ~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  181 (257)
T cd08223         105 VEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNY  181 (257)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCc
Confidence            5788999999999999   99999999999999986542                        56899999999888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||++++|+++|+.||.....       ..... ....+...         ..+......+.+++.+|++.+|++
T Consensus       182 ~~Dv~slG~il~~l~~g~~~~~~~~~-------~~~~~-~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~  244 (257)
T cd08223         182 KSDVWALGCCVYEMATLKHAFNAKDM-------NSLVY-RIIEGKLP---------PMPKDYSPELGELIATMLSKRPEK  244 (257)
T ss_pred             hhhhHHHHHHHHHHHcCCCCCCCCCH-------HHHHH-HHHhcCCC---------CCccccCHHHHHHHHHHhccCccc
Confidence            99999999999999999999864321       11111 12122111         112234467889999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       245 Rp~~~~~  251 (257)
T cd08223         245 RPSVKSI  251 (257)
T ss_pred             CCCHHHH
Confidence            9999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.87  E-value=4.6e-23  Score=179.21  Aligned_cols=137  Identities=15%  Similarity=0.199  Sum_probs=93.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+ ..++
T Consensus       106 ~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  182 (303)
T cd07869         106 KLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYS  182 (303)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCC
Confidence            4578999999999999   99999999999999986542                        567999998875 4578


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC---ccchh-----hhhccc---ccch-H------H
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG---EFQDL-----IIVCGM---EKNN-K------E  118 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~---~~~~-~------~  118 (291)
                      .++||||+||++|||++|..||.......   .............   .....     ..+...   .+.. .      .
T Consensus       183 ~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (303)
T cd07869         183 TCLDMWGVGCIFVEMIQGVAAFPGMKDIQ---DQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLS  259 (303)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCccHH---HHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccC
Confidence            89999999999999999999997543210   0001111000000   00000     000000   0000 0      0


Q ss_pred             HHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          119 KAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       119 ~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ....+.+++.+|++.||++|||+.|+
T Consensus       260 ~~~~~~dli~~mL~~dp~~R~s~~~~  285 (303)
T cd07869         260 YVNHAEDLASKLLQCFPKNRLSAQAA  285 (303)
T ss_pred             CChHHHHHHHHHhccCchhccCHHHH
Confidence            12456789999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.87  E-value=1.2e-22  Score=180.80  Aligned_cols=77  Identities=26%  Similarity=0.362  Sum_probs=70.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..++.|++.||+|||+   ++|+||||||+|||++.++.                       ++.|+|||++.+..++.+
T Consensus       126 ~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  202 (359)
T cd07876         126 SYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKEN  202 (359)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcc
Confidence            3578999999999999   99999999999999986643                       567999999999899999


Q ss_pred             cceechhHHHHHHhhCCCccccc
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQ   81 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~   81 (291)
                      +|||||||++|||++|+.||...
T Consensus       203 ~DiwSlG~il~el~tg~~pf~~~  225 (359)
T cd07876         203 VDIWSVGCIMGELVKGSVIFQGT  225 (359)
T ss_pred             hhhHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.87  E-value=1e-22  Score=181.01  Aligned_cols=78  Identities=26%  Similarity=0.384  Sum_probs=70.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                       +..|+|||++.+..++.+
T Consensus       122 ~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  198 (355)
T cd07874         122 SYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN  198 (355)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCch
Confidence            3578999999999999   99999999999999986643                       678999999998889999


Q ss_pred             cceechhHHHHHHhhCCCcccccc
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                      +|||||||++|||++|+.||....
T Consensus       199 ~DiwslG~il~el~~g~~pf~~~~  222 (355)
T cd07874         199 VDIWSVGCIMGEMVRHKILFPGRD  222 (355)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999996543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.87  E-value=5e-23  Score=179.91  Aligned_cols=78  Identities=27%  Similarity=0.403  Sum_probs=66.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccC----CC---------------------------CCccccCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK----FW---------------------------TPGYAAPETW   50 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~----~~---------------------------t~~y~aPE~~   50 (291)
                      ..|+.|++.||.|||+   .+|+||||||+|||+..+    +.                           ++.|+|||++
T Consensus       111 ~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~  187 (317)
T cd07867         111 KSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL  187 (317)
T ss_pred             HHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHh
Confidence            4688999999999999   999999999999999421    11                           5679999998


Q ss_pred             cCC-CCccccceechhHHHHHHhhCCCcccccc
Q 022858           51 MSF-PVTHKCDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        51 ~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                      .+. .++.++|||||||++|||+||+.||....
T Consensus       188 ~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~  220 (317)
T cd07867         188 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  220 (317)
T ss_pred             cCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence            764 58899999999999999999999986543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.87  E-value=3.8e-23  Score=184.37  Aligned_cols=78  Identities=26%  Similarity=0.361  Sum_probs=70.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..++.|++.||+|||+   ++|+||||||+|||++.++.                       +..|+|||++.+..++.+
T Consensus       129 ~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  205 (364)
T cd07875         129 SYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN  205 (364)
T ss_pred             HHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCch
Confidence            4578999999999999   99999999999999986542                       678999999999899999


Q ss_pred             cceechhHHHHHHhhCCCcccccc
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                      +|||||||++|||++|+.||....
T Consensus       206 ~DiwSlG~il~ell~g~~pf~~~~  229 (364)
T cd07875         206 VDIWSVGCIMGEMIKGGVLFPGTD  229 (364)
T ss_pred             hhHHhHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999996543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=2.4e-23  Score=183.23  Aligned_cols=123  Identities=20%  Similarity=0.266  Sum_probs=92.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+. .++
T Consensus        99 ~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (330)
T cd05586          99 KFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYT  175 (330)
T ss_pred             HHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCC
Confidence            4578999999999999   99999999999999986532                        6689999998764 478


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++|||||||++|||++|..||.....        ......+..+... +        ........+.+++.+||+.||+
T Consensus       176 ~~~DvwslGvil~elltG~~Pf~~~~~--------~~~~~~i~~~~~~-~--------~~~~~~~~~~~li~~~L~~~P~  238 (330)
T cd05586         176 KHVDFWSLGVLVFEMCCGWSPFYAEDT--------QQMYRNIAFGKVR-F--------PKNVLSDEGRQFVKGLLNRNPQ  238 (330)
T ss_pred             CccceeccccEEEEeccCCCCCCCCCH--------HHHHHHHHcCCCC-C--------CCccCCHHHHHHHHHHcCCCHH
Confidence            999999999999999999999865432        1122222222110 0        0011235667899999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +||++.+.
T Consensus       239 ~R~~~~~~  246 (330)
T cd05586         239 HRLGAHRD  246 (330)
T ss_pred             HCCCCCCC
Confidence            99987655

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.87  E-value=4.6e-23  Score=173.98  Aligned_cols=128  Identities=22%  Similarity=0.248  Sum_probs=99.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||.|||+   .+++|+||||+||+++.+..                         ++.|+|||++.+..++
T Consensus        96 ~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  172 (250)
T cd05085          96 VKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYS  172 (250)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCC
Confidence            5688999999999999   99999999999999986542                         3459999999888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++||+++ |..||......        ........+...         ..+...+..+.+++.+|++.+|
T Consensus       173 ~~~Di~slG~ll~~~~~~g~~p~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p  235 (250)
T cd05085         173 SESDVWSYGILLWETFSLGVCPYPGMTNQ--------QAREQVEKGYRM---------SCPQKCPDDVYKVMQRCWDYKP  235 (250)
T ss_pred             chhHHHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcccCc
Confidence            99999999999999998 88888543221        112222221111         1112235688999999999999


Q ss_pred             CCCCCCCccchhhhhh
Q 022858          136 EAMPSMTVRPAKFMLH  151 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~  151 (291)
                      ++||++.++  ++.|.
T Consensus       236 ~~Rp~~~~l--~~~l~  249 (250)
T cd05085         236 ENRPKFSEL--QKELA  249 (250)
T ss_pred             ccCCCHHHH--HHHhc
Confidence            999999999  87764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.87  E-value=3.3e-23  Score=178.82  Aligned_cols=131  Identities=21%  Similarity=0.304  Sum_probs=100.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++++.|++.||.|||+   ++|+||||||+|||++.++.                          +..|+|||.+.+..+
T Consensus       122 ~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~  198 (288)
T cd05061         122 IQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVF  198 (288)
T ss_pred             HHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCC
Confidence            4588999999999999   99999999999999986543                          235999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++||+++ |..|+......        ........+...         ..+..+...+.+++.+|++.+
T Consensus       199 ~~~~DvwslG~~l~el~~~~~~p~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~  261 (288)
T cd05061         199 TTSSDMWSFGVVLWEITSLAEQPYQGLSNE--------QVLKFVMDGGYL---------DQPDNCPERVTDLMRMCWQFN  261 (288)
T ss_pred             ChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999998 67777543211        111111111111         111223468899999999999


Q ss_pred             CCCCCCCCccchhhhhhccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~  154 (291)
                      |++||++.++  ++.|....
T Consensus       262 p~~Rps~~~l--l~~l~~~~  279 (288)
T cd05061         262 PKMRPTFLEI--VNLLKDDL  279 (288)
T ss_pred             hhHCcCHHHH--HHHHHhhc
Confidence            9999999999  88887653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.87  E-value=3.5e-23  Score=182.06  Aligned_cols=122  Identities=17%  Similarity=0.184  Sum_probs=93.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus        98 ~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  174 (328)
T cd05593          98 RFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGR  174 (328)
T ss_pred             HHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCc
Confidence            4678999999999999   99999999999999986532                        67899999999888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......        .....+.....          ..+......+.+++.+||+.||++
T Consensus       175 ~~DiwslGvil~elltG~~Pf~~~~~~--------~~~~~~~~~~~----------~~p~~~~~~~~~li~~~L~~dP~~  236 (328)
T cd05593         175 AVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEDI----------KFPRTLSADAKSLLSGLLIKDPNK  236 (328)
T ss_pred             cCCccccchHHHHHhhCCCCCCCCCHH--------HHHHHhccCCc----------cCCCCCCHHHHHHHHHHcCCCHHH
Confidence            999999999999999999999654321        11111111110          111123456788999999999999


Q ss_pred             CC-----CCCcc
Q 022858          138 MP-----SMTVR  144 (291)
Q Consensus       138 RP-----s~~~v  144 (291)
                      ||     ++.++
T Consensus       237 R~~~~~~~~~~i  248 (328)
T cd05593         237 RLGGGPDDAKEI  248 (328)
T ss_pred             cCCCCCCCHHHH
Confidence            98     55555

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.87  E-value=1.1e-22  Score=178.83  Aligned_cols=127  Identities=19%  Similarity=0.215  Sum_probs=96.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (327)
T cd05617          99 RFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGF  175 (327)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCc
Confidence            4688999999999999   99999999999999986542                        67899999999889999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|..||...... ......+...........          ..+......+.+++.+|++.||++
T Consensus       176 ~~DiwslGvil~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~----------~~p~~~~~~~~~li~~~L~~dP~~  244 (327)
T cd05617         176 SVDWWALGVLMFEMMAGRSPFDIITDN-PDMNTEDYLFQVILEKPI----------RIPRFLSVKASHVLKGFLNKDPKE  244 (327)
T ss_pred             hheeehhHHHHHHHHhCCCCCCccCCC-cccccHHHHHHHHHhCCC----------CCCCCCCHHHHHHHHHHhccCHHH
Confidence            999999999999999999999654322 111222233333222111          111123356788999999999999


Q ss_pred             CCCCC
Q 022858          138 MPSMT  142 (291)
Q Consensus       138 RPs~~  142 (291)
                      |+++.
T Consensus       245 R~~~~  249 (327)
T cd05617         245 RLGCQ  249 (327)
T ss_pred             cCCCC
Confidence            99975

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.87  E-value=3.1e-23  Score=178.60  Aligned_cols=138  Identities=17%  Similarity=0.161  Sum_probs=99.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.++.                           +..|+|||++.+..
T Consensus       112 ~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~  188 (284)
T cd05079         112 LKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSK  188 (284)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCC
Confidence            5788999999999999   99999999999999986543                           23599999998888


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccC-------CCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHH
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARS-------GFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVA  127 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  127 (291)
                      ++.++||||||+++|||+++..|........       ...............+.         ..+....++..+.+++
T Consensus       189 ~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li  259 (284)
T cd05079         189 FYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK---------RLPRPPNCPEEVYQLM  259 (284)
T ss_pred             CCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCc---------cCCCCCCCCHHHHHHH
Confidence            9999999999999999999876543221100       00000011111111111         1111223457899999


Q ss_pred             HHccccCCCCCCCCCccchhhhhhcc
Q 022858          128 LWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       128 ~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      .+|++.+|++||++.++  +..|+.+
T Consensus       260 ~~~l~~~p~~Rpt~~~i--l~~l~~~  283 (284)
T cd05079         260 RKCWEFQPSKRTTFQNL--IEGFEAI  283 (284)
T ss_pred             HHHccCCcccCcCHHHH--HHHHHhh
Confidence            99999999999999999  8888764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.87  E-value=5.5e-23  Score=173.60  Aligned_cols=128  Identities=22%  Similarity=0.252  Sum_probs=98.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.+++.||+|||+   .+++||||||+||+++.+..                          +..|+|||.+.+..+
T Consensus        96 ~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~  172 (251)
T cd05041          96 LQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRY  172 (251)
T ss_pred             HHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCC
Confidence            4678899999999999   99999999999999986542                          234999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|+||||+++|||++ |..|+......        ..........         ....+...+..+.+++.+|++.+
T Consensus       173 ~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~  235 (251)
T cd05041         173 TSESDVWSYGILLWETFSLGDTPYPGMSNQ--------QTRERIESGY---------RMPAPQLCPEEIYRLMLQCWAYD  235 (251)
T ss_pred             CcchhHHHHHHHHHHHHhccCCCCccCCHH--------HHHHHHhcCC---------CCCCCccCCHHHHHHHHHHhccC
Confidence            999999999999999998 77777544321        0111111110         01112234567899999999999


Q ss_pred             CCCCCCCCccchhhhhh
Q 022858          135 PEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~  151 (291)
                      |++||++.++  +..|+
T Consensus       236 p~~Rp~~~el--l~~l~  250 (251)
T cd05041         236 PENRPSFSEI--YNELQ  250 (251)
T ss_pred             hhhCcCHHHH--HHHhh
Confidence            9999999999  88775

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.87  E-value=3.9e-23  Score=181.13  Aligned_cols=121  Identities=21%  Similarity=0.236  Sum_probs=94.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||+|||+   ++|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus        99 ~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (320)
T cd05590          99 RFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGP  175 (320)
T ss_pred             HHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCC
Confidence            4578999999999999   99999999999999986542                        67899999999888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......        .....+..+..          ..+......+.+++.+|++.||++
T Consensus       176 ~~DiwslG~il~el~~g~~Pf~~~~~~--------~~~~~i~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~  237 (320)
T cd05590         176 SVDWWAMGVLLYEMLCGHAPFEAENED--------DLFEAILNDEV----------VYPTWLSQDAVDILKAFMTKNPTM  237 (320)
T ss_pred             ccchhhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHhcCCC----------CCCCCCCHHHHHHHHHHcccCHHH
Confidence            999999999999999999999754321        11222222111          011123456788999999999999


Q ss_pred             CCCCCc
Q 022858          138 MPSMTV  143 (291)
Q Consensus       138 RPs~~~  143 (291)
                      ||++.+
T Consensus       238 R~~~~~  243 (320)
T cd05590         238 RLGSLT  243 (320)
T ss_pred             CCCCCC
Confidence            999844

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.87  E-value=7.3e-23  Score=174.84  Aligned_cols=132  Identities=21%  Similarity=0.227  Sum_probs=102.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.+..                         +..|+|||.+....++
T Consensus       110 ~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  186 (270)
T cd05056         110 ILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFT  186 (270)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCC
Confidence            4688999999999999   99999999999999986543                         2469999998888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++||+++ |..||......       + .......+...         ..+..++..+.+++.+|+..+|
T Consensus       187 ~~~Di~slG~il~el~~~g~~pf~~~~~~-------~-~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~P  249 (270)
T cd05056         187 SASDVWMFGVCMWEILMLGVKPFQGVKNN-------D-VIGRIENGERL---------PMPPNCPPTLYSLMTKCWAYDP  249 (270)
T ss_pred             chhhhHHHHHHHHHHHHcCCCCCCCCCHH-------H-HHHHHHcCCcC---------CCCCCCCHHHHHHHHHHcCCCh
Confidence            99999999999999986 99998654321       1 11111111111         1122344678899999999999


Q ss_pred             CCCCCCCccchhhhhhcccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ++||++.++  +..|++...
T Consensus       250 ~~Rpt~~~~--~~~l~~~~~  267 (270)
T cd05056         250 SKRPRFTEL--KAQLSDILQ  267 (270)
T ss_pred             hhCcCHHHH--HHHHHHHHh
Confidence            999999999  888887654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.87  E-value=1e-22  Score=163.79  Aligned_cols=133  Identities=18%  Similarity=0.246  Sum_probs=103.7

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCCc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~~   56 (291)
                      ....||++||.|+|.   ++|||||+||+|+||.....                          ||+|||||++...+|+
T Consensus       114 H~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~  190 (355)
T KOG0033|consen  114 HCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYS  190 (355)
T ss_pred             HHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCC
Confidence            357899999999999   99999999999999974321                          9999999999999999


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      ..+|||+.|++||-|+.|..||.+....        .+++.+.++...      ..++......+...+|+.+++..||.
T Consensus       191 kpvDiW~cGViLfiLL~G~~PF~~~~~~--------rlye~I~~g~yd------~~~~~w~~is~~Ak~LvrrML~~dP~  256 (355)
T KOG0033|consen  191 KPVDIWACGVILYILLVGYPPFWDEDQH--------RLYEQIKAGAYD------YPSPEWDTVTPEAKSLIRRMLTVNPK  256 (355)
T ss_pred             CcchhhhhhHHHHHHHhCCCCCCCccHH--------HHHHHHhccccC------CCCcccCcCCHHHHHHHHHHhccChh
Confidence            9999999999999999999999874421        234444443321      11223334456677888999999999


Q ss_pred             CCCCCCccchhhhhhc
Q 022858          137 AMPSMTVRPAKFMLHG  152 (291)
Q Consensus       137 ~RPs~~~v~~~~~L~~  152 (291)
                      +|.|+.|.++..++.+
T Consensus       257 kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  257 KRITADEALKHPWICN  272 (355)
T ss_pred             hhccHHHHhCCchhcc
Confidence            9999998844444433

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.87  E-value=9.9e-23  Score=166.20  Aligned_cols=126  Identities=25%  Similarity=0.310  Sum_probs=101.1

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccC------C
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMS------F   53 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~------~   53 (291)
                      +|.+|+.+|++|||.   .+||||||||+|||+|+|+.                       ||+|+|||.+.-      .
T Consensus       127 ~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~p  203 (411)
T KOG0599|consen  127 RIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHP  203 (411)
T ss_pred             HHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCC
Confidence            688999999999999   99999999999999998865                       999999998852      3


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      .|+..+|+||.|+++|.|+.|.+||......        .....+.+|.+.      -.++...+......+|+.+|++.
T Consensus       204 GYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm--------lMLR~ImeGkyq------F~speWadis~~~KdLIsrlLqV  269 (411)
T KOG0599|consen  204 GYSKEVDEWACGVIMYTLLAGCPPFWHRKQM--------LMLRMIMEGKYQ------FRSPEWADISATVKDLISRLLQV  269 (411)
T ss_pred             CccchhhHHHHHHHHHHHHcCCCchhHHHHH--------HHHHHHHhcccc------cCCcchhhccccHHHHHHHHHee
Confidence            5888999999999999999999998654421        122333344332      11334455667788999999999


Q ss_pred             CCCCCCCCCccc
Q 022858          134 KPEAMPSMTVRP  145 (291)
Q Consensus       134 ~p~~RPs~~~v~  145 (291)
                      ||.+|.|+.|++
T Consensus       270 dp~~Ritake~L  281 (411)
T KOG0599|consen  270 DPTKRITAKEAL  281 (411)
T ss_pred             CchhcccHHHHh
Confidence            999999999983

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.87  E-value=4e-23  Score=181.33  Aligned_cols=118  Identities=18%  Similarity=0.234  Sum_probs=91.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus        98 ~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  174 (323)
T cd05595          98 RFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR  174 (323)
T ss_pred             HHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCc
Confidence            4678999999999999   99999999999999986542                        67899999999889999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......        .....+.....          ..+......+.+++.+||+.||++
T Consensus       175 ~~DiwSlGvil~ell~g~~Pf~~~~~~--------~~~~~~~~~~~----------~~p~~~~~~~~~li~~~L~~dP~~  236 (323)
T cd05595         175 AVDWWGLGVVMYEMMCGRLPFYNQDHE--------RLFELILMEEI----------RFPRTLSPEAKSLLAGLLKKDPKQ  236 (323)
T ss_pred             hhchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCCC----------CCCCCCCHHHHHHHHHHccCCHHH
Confidence            999999999999999999998654321        11111111110          011223467788999999999999


Q ss_pred             CCC
Q 022858          138 MPS  140 (291)
Q Consensus       138 RPs  140 (291)
                      ||+
T Consensus       237 R~~  239 (323)
T cd05595         237 RLG  239 (323)
T ss_pred             hCC
Confidence            984

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.87  E-value=5.7e-23  Score=176.41  Aligned_cols=133  Identities=19%  Similarity=0.185  Sum_probs=102.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.+..                          +..|+|||.+....+
T Consensus       112 ~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~  188 (279)
T cd05057         112 LNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIY  188 (279)
T ss_pred             HHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCc
Confidence            5788999999999999   99999999999999986542                          246999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|+||||+++||+++ |..|+......        .+......+..         ...+..+...+.+++.+||..+
T Consensus       189 ~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~  251 (279)
T cd05057         189 THKSDVWSYGVTVWELMTFGAKPYEGIPAV--------EIPDLLEKGER---------LPQPPICTIDVYMVLVKCWMID  251 (279)
T ss_pred             CchhhHHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHhCCCC---------CCCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999998 99998654321        11222222111         1111223356788999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |++||++.++  +..|......
T Consensus       252 p~~Rp~~~~l--~~~l~~~~~~  271 (279)
T cd05057         252 AESRPTFKEL--INEFSKMARD  271 (279)
T ss_pred             hhhCCCHHHH--HHHHHHHHhC
Confidence            9999999999  9988877553

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.87  E-value=5.1e-23  Score=174.38  Aligned_cols=129  Identities=22%  Similarity=0.270  Sum_probs=98.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.++.                           +..|+|||++.+..
T Consensus       100 ~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~  176 (257)
T cd05040         100 CDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRT  176 (257)
T ss_pred             HHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccC
Confidence            4678899999999999   99999999999999986542                           35799999998888


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++||||||+++|||++ |..|+......       + ........ .       .....+...+..+.+++.+|++.
T Consensus       177 ~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-------~-~~~~~~~~-~-------~~~~~~~~~~~~~~~li~~~l~~  240 (257)
T cd05040         177 FSHASDVWMFGVTLWEMFTYGEEPWAGLSGS-------Q-ILKKIDKE-G-------ERLERPEACPQDIYNVMLQCWAH  240 (257)
T ss_pred             cCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-------H-HHHHHHhc-C-------CcCCCCccCCHHHHHHHHHHCCC
Confidence            9999999999999999998 99998543321       1 11111110 0       00111123346788999999999


Q ss_pred             CCCCCCCCCccchhhhhh
Q 022858          134 KPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~  151 (291)
                      +|++||++.++  ++.|.
T Consensus       241 ~p~~Rps~~~~--~~~l~  256 (257)
T cd05040         241 NPADRPTFAAL--REFLP  256 (257)
T ss_pred             CcccCCCHHHH--HHHhc
Confidence            99999999999  87764

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.87  E-value=6.4e-23  Score=179.49  Aligned_cols=122  Identities=22%  Similarity=0.247  Sum_probs=94.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (316)
T cd05619          99 TFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNT  175 (316)
T ss_pred             HHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCc
Confidence            4578999999999999   99999999999999986532                        67899999999889999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|..||......        .....+....      +    ..+......+.+++.+|++.||++
T Consensus       176 ~~DvwslG~il~el~~G~~pf~~~~~~--------~~~~~i~~~~------~----~~~~~~~~~~~~li~~~l~~~P~~  237 (316)
T cd05619         176 SVDWWSFGVLLYEMLIGQSPFHGHDEE--------ELFQSIRMDN------P----CYPRWLTREAKDILVKLFVREPER  237 (316)
T ss_pred             hhhhhhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCC------C----CCCccCCHHHHHHHHHHhccCHhh
Confidence            999999999999999999998654321        1111111110      0    011123356788999999999999


Q ss_pred             CCCCC-cc
Q 022858          138 MPSMT-VR  144 (291)
Q Consensus       138 RPs~~-~v  144 (291)
                      ||++. ++
T Consensus       238 R~~~~~~l  245 (316)
T cd05619         238 RLGVKGDI  245 (316)
T ss_pred             cCCChHHH
Confidence            99997 55

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.87  E-value=7.2e-23  Score=179.75  Aligned_cols=120  Identities=23%  Similarity=0.297  Sum_probs=93.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus       104 ~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  180 (324)
T cd05587         104 VFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGK  180 (324)
T ss_pred             HHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCc
Confidence            4578999999999999   99999999999999986532                        67899999999989999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||+||++|||++|+.||......        .....+.....          ..+......+.+++.+|++.||.+
T Consensus       181 ~~DiwslGvil~elltG~~pf~~~~~~--------~~~~~i~~~~~----------~~~~~~~~~~~~li~~~l~~~P~~  242 (324)
T cd05587         181 SVDWWAFGVLLYEMLAGQPPFDGEDED--------ELFQSIMEHNV----------SYPKSLSKEAVSICKGLLTKHPAK  242 (324)
T ss_pred             ccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCC----------CCCCCCCHHHHHHHHHHhhcCHHH
Confidence            999999999999999999999654321        11111211110          111123456788999999999999


Q ss_pred             CCCCC
Q 022858          138 MPSMT  142 (291)
Q Consensus       138 RPs~~  142 (291)
                      |++..
T Consensus       243 R~~~~  247 (324)
T cd05587         243 RLGCG  247 (324)
T ss_pred             cCCCC
Confidence            99874

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.87  E-value=9e-23  Score=179.52  Aligned_cols=128  Identities=19%  Similarity=0.244  Sum_probs=96.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..|+.|++.||+|||+   ++|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus        99 ~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (329)
T cd05618          99 RFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGF  175 (329)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCC
Confidence            4678999999999999   99999999999999986542                        67899999999989999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCC-CCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSG-FPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      ++|||||||++|||++|+.||........ ......++...+.....          ..+......+.+++.+|++.||+
T Consensus       176 ~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~----------~~p~~~~~~~~~ll~~~L~~dP~  245 (329)
T cd05618         176 SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----------RIPRSLSVKAASVLKSFLNKDPK  245 (329)
T ss_pred             ccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC----------CCCCCCCHHHHHHHHHHhcCCHH
Confidence            99999999999999999999964322211 11122333333322211          11222345678899999999999


Q ss_pred             CCCCCC
Q 022858          137 AMPSMT  142 (291)
Q Consensus       137 ~RPs~~  142 (291)
                      +||++.
T Consensus       246 ~R~~~~  251 (329)
T cd05618         246 ERLGCH  251 (329)
T ss_pred             HcCCCC
Confidence            999964

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.87  E-value=3.3e-23  Score=177.97  Aligned_cols=138  Identities=17%  Similarity=0.152  Sum_probs=102.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.++.                           +..|++||...+..
T Consensus       112 ~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~  188 (284)
T cd05038         112 LLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSK  188 (284)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCC
Confidence            5688999999999999   99999999999999987643                           23489999998888


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCC-------CchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHH
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGF-------PSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVA  127 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  127 (291)
                      ++.++||||||+++|||++|..|+.........       .............         ......+..++..+.+++
T Consensus       189 ~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~li  259 (284)
T cd05038         189 FSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE---------GERLPRPPSCPDEVYDLM  259 (284)
T ss_pred             CCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHc---------CCcCCCCccCCHHHHHHH
Confidence            999999999999999999999887543321100       0001111111111         111111223447789999


Q ss_pred             HHccccCCCCCCCCCccchhhhhhcc
Q 022858          128 LWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       128 ~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      .+|++.+|++||++.++  +++|+.+
T Consensus       260 ~~cl~~~p~~Rpt~~ei--~~~l~~i  283 (284)
T cd05038         260 KLCWEAEPQDRPSFADL--ILIVDRL  283 (284)
T ss_pred             HHHhccChhhCCCHHHH--HHHHhhc
Confidence            99999999999999999  9998765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.87  E-value=2.6e-23  Score=179.54  Aligned_cols=136  Identities=18%  Similarity=0.264  Sum_probs=94.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||.+.+ ..++
T Consensus       106 ~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  182 (288)
T cd07871         106 KIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYS  182 (288)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccC
Confidence            4578999999999999   99999999999999986542                        667999998875 4688


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhh------------cCccchhhhhcccc----cchHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLE------------KGEFQDLIIVCGME----KNNKEKA  120 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~----~~~~~~~  120 (291)
                      .++||||+||++|||++|+.||......+    ..........            ...+.....+....    .......
T Consensus       183 ~~~DiwslG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (288)
T cd07871         183 TPIDMWGVGCILYEMATGRPMFPGSTVKE----ELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLD  258 (288)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCC
Confidence            99999999999999999999996544221    0111110000            00000111110000    0001123


Q ss_pred             HHHHHHHHHccccCCCCCCCCCcc
Q 022858          121 ERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       121 ~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ....+++.+|++.||.+|||+.|+
T Consensus       259 ~~~~dll~~mL~~dp~~R~t~~~~  282 (288)
T cd07871         259 TDGIDLLSSLLLYETKSRISAEAA  282 (288)
T ss_pred             HHHHHHHHHhcCcCcccCCCHHHH
Confidence            567899999999999999999988

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.87  E-value=4.5e-23  Score=174.61  Aligned_cols=123  Identities=22%  Similarity=0.375  Sum_probs=96.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||.|||+   .+|+|+||||+||+++.++.                        ++.|+|||++.+..++.
T Consensus       103 ~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  179 (255)
T cd08219         103 LQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNN  179 (255)
T ss_pred             HHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHccCCcCc
Confidence            4678999999999999   99999999999999986542                        55699999998888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|+||||+++|+|++|..||......       . .......+....         .+......+.+++.+||+.||++
T Consensus       180 ~~Dv~slG~i~~~l~~g~~p~~~~~~~-------~-~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~P~~  242 (255)
T cd08219         180 KSDIWSLGCILYELCTLKHPFQANSWK-------N-LILKVCQGSYKP---------LPSHYSYELRSLIKQMFKRNPRS  242 (255)
T ss_pred             hhhhhhhchhheehhhccCCCCCCCHH-------H-HHHHHhcCCCCC---------CCcccCHHHHHHHHHHHhCCccc
Confidence            999999999999999999998644311       1 111222222111         11223456788999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       243 Rp~~~~i  249 (255)
T cd08219         243 RPSATTI  249 (255)
T ss_pred             CCCHHHH
Confidence            9999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.87  E-value=8.3e-23  Score=179.34  Aligned_cols=121  Identities=21%  Similarity=0.280  Sum_probs=94.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||.+.+..++.
T Consensus       104 ~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  180 (324)
T cd05589         104 VFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTR  180 (324)
T ss_pred             HHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCc
Confidence            4688999999999999   99999999999999986542                        67899999999888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......        .....+..+..          ..+......+.+++.+||+.||++
T Consensus       181 ~~DiwslG~il~el~~G~~pf~~~~~~--------~~~~~i~~~~~----------~~p~~~~~~~~~li~~~L~~dP~~  242 (324)
T cd05589         181 AVDWWGLGVLIYEMLVGESPFPGDDEE--------EVFDSIVNDEV----------RYPRFLSREAISIMRRLLRRNPER  242 (324)
T ss_pred             ccchhhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCC----------CCCCCCCHHHHHHHHHHhhcCHhH
Confidence            999999999999999999998654321        11111111110          111223466788999999999999


Q ss_pred             CCCCCc
Q 022858          138 MPSMTV  143 (291)
Q Consensus       138 RPs~~~  143 (291)
                      ||++.+
T Consensus       243 R~~~~~  248 (324)
T cd05589         243 RLGSGE  248 (324)
T ss_pred             cCCCCC
Confidence            997654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.87  E-value=6.5e-23  Score=174.93  Aligned_cols=130  Identities=21%  Similarity=0.226  Sum_probs=100.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.|+.|++.||+|||+   .+++||||||+|||++.+..                           +..|++||++.+..
T Consensus       109 ~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~  185 (267)
T cd05066         109 VGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK  185 (267)
T ss_pred             HHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCc
Confidence            5688999999999999   99999999999999986542                           23599999998888


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++|+||||+++||+++ |..||......        .....+.++.  .       .+.....+..+.+++.+|++.
T Consensus       186 ~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--------~~~~~~~~~~--~-------~~~~~~~~~~~~~li~~~l~~  248 (267)
T cd05066         186 FTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--------DVIKAIEEGY--R-------LPAPMDCPAALHQLMLDCWQK  248 (267)
T ss_pred             cCchhhhHHHHHHHHHHhcCCCCCcccCCHH--------HHHHHHhCCC--c-------CCCCCCCCHHHHHHHHHHccc
Confidence            9999999999999999886 99998654321        0111121110  0       011122346778999999999


Q ss_pred             CCCCCCCCCccchhhhhhcc
Q 022858          134 KPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~  153 (291)
                      +|++||++.++  ++.|+..
T Consensus       249 ~p~~Rp~~~~i--~~~l~~~  266 (267)
T cd05066         249 DRNERPKFEQI--VSILDKL  266 (267)
T ss_pred             CchhCCCHHHH--HHHHHhh
Confidence            99999999999  8888764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.87  E-value=1.4e-22  Score=179.99  Aligned_cols=134  Identities=18%  Similarity=0.149  Sum_probs=95.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-----
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-----   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-----   52 (291)
                      ..|+.||+.||+|||+   .+|+||||||+|||++.++.                        +..|+|||++..     
T Consensus       171 ~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  247 (353)
T PLN00034        171 ADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHG  247 (353)
T ss_pred             HHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCccccccccccC
Confidence            4689999999999999   99999999999999986542                        668999998753     


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ...+.++|||||||++|||++|+.||......    . ............         ...........+.+++.+||+
T Consensus       248 ~~~~~~~DvwslGvil~el~~g~~pf~~~~~~----~-~~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~  313 (353)
T PLN00034        248 AYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG----D-WASLMCAICMSQ---------PPEAPATASREFRHFISCCLQ  313 (353)
T ss_pred             cCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc----c-HHHHHHHHhccC---------CCCCCCccCHHHHHHHHHHcc
Confidence            23446899999999999999999998733211    0 011111111000         011122344678899999999


Q ss_pred             cCCCCCCCCCccchhhhhhc
Q 022858          133 YKPEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       133 ~~p~~RPs~~~v~~~~~L~~  152 (291)
                      .||++||++.|+.....+.+
T Consensus       314 ~~P~~Rpt~~ell~hp~~~~  333 (353)
T PLN00034        314 REPAKRWSAMQLLQHPFILR  333 (353)
T ss_pred             CChhhCcCHHHHhcCccccc
Confidence            99999999999933333433

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.3e-22  Score=179.57  Aligned_cols=129  Identities=24%  Similarity=0.283  Sum_probs=101.3

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccC-CC------------------------CCccccCccccCCC-Cc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK-FW------------------------TPGYAAPETWMSFP-VT   56 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~-~~------------------------t~~y~aPE~~~~~~-~~   56 (291)
                      .++.|++.|++|||+   ++|+||||||+|||++.+ +.                        ++.|+|||++.+.. |+
T Consensus       124 ~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~  200 (370)
T KOG0583|consen  124 KYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYS  200 (370)
T ss_pred             HHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcC
Confidence            578999999999999   999999999999999987 43                        88999999999877 87


Q ss_pred             -cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHH-HHHHHHHHHHccccC
Q 022858           57 -HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEK-AERMALVALWRVQYK  134 (291)
Q Consensus        57 -~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~cl~~~  134 (291)
                       .++||||+||+||-|++|..||+.....        .....+..+.+.   -|       ... ...+..++.+|+..|
T Consensus       201 g~~aDvWS~GViLy~ml~G~~PF~d~~~~--------~l~~ki~~~~~~---~p-------~~~~S~~~~~Li~~mL~~~  262 (370)
T KOG0583|consen  201 GKAADVWSLGVILYVLLCGRLPFDDSNVP--------NLYRKIRKGEFK---IP-------SYLLSPEARSLIEKMLVPD  262 (370)
T ss_pred             CchhhhhhhHHHHHHHHhCCCCCCCccHH--------HHHHHHhcCCcc---CC-------CCcCCHHHHHHHHHHcCCC
Confidence             6799999999999999999999874321        122223322211   11       111 567788999999999


Q ss_pred             CCCCCCCCccchhhhhhc
Q 022858          135 PEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~  152 (291)
                      |.+|+++.+|....++..
T Consensus       263 P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  263 PSTRITLLEILEHPWFQK  280 (370)
T ss_pred             cccCCCHHHHhhChhhcc
Confidence            999999999944445554

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.87  E-value=9.2e-23  Score=173.33  Aligned_cols=129  Identities=25%  Similarity=0.305  Sum_probs=99.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.+..                         +..|+|||++....++
T Consensus       105 ~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  181 (260)
T cd05073         105 IDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT  181 (260)
T ss_pred             HHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcC
Confidence            4688999999999999   99999999999999986533                         2459999999888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++|+||||+++|++++ |..||......        ........+...         +.....+..+.+++.+|++.+|
T Consensus       182 ~~~Di~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~~p  244 (260)
T cd05073         182 IKSDVWSFGILLMEIVTYGRIPYPGMSNP--------EVIRALERGYRM---------PRPENCPEELYNIMMRCWKNRP  244 (260)
T ss_pred             ccccchHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHhCCCCC---------CCcccCCHHHHHHHHHHcccCc
Confidence            99999999999999998 88888643321        111122221110         1112334678899999999999


Q ss_pred             CCCCCCCccchhhhhhc
Q 022858          136 EAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~  152 (291)
                      ++||++.++  +..|+.
T Consensus       245 ~~Rp~~~~l--~~~L~~  259 (260)
T cd05073         245 EERPTFEYI--QSVLDD  259 (260)
T ss_pred             ccCcCHHHH--HHHHhc
Confidence            999999999  888764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.87  E-value=7.4e-23  Score=175.98  Aligned_cols=125  Identities=21%  Similarity=0.248  Sum_probs=94.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.||+.||+|||+   .+|+||||||+||+++.++.                        ++.|+|||++.+..++.
T Consensus       100 ~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  176 (280)
T cd05608         100 CFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDF  176 (280)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCc
Confidence            4688999999999999   99999999999999986532                        56899999999989999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|+.||........    ............          ...+...+..+.+++.+|++.||++
T Consensus       177 ~~DvwslG~il~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~~~P~~  242 (280)
T cd05608         177 SVDYFALGVTLYEMIAARGPFRARGEKVE----NKELKQRILNDS----------VTYPDKFSPASKSFCEALLAKDPEK  242 (280)
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCCCcchh----HHHHHHhhcccC----------CCCcccCCHHHHHHHHHHhcCCHHH
Confidence            99999999999999999999865432100    000111111000          1112234567889999999999999


Q ss_pred             CCCCCc
Q 022858          138 MPSMTV  143 (291)
Q Consensus       138 RPs~~~  143 (291)
                      ||++++
T Consensus       243 R~~~~~  248 (280)
T cd05608         243 RLGFRD  248 (280)
T ss_pred             hcCCCC
Confidence            997654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.87  E-value=4.5e-23  Score=181.60  Aligned_cols=78  Identities=27%  Similarity=0.385  Sum_probs=69.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      ..++.|++.||.|||+.  .+|+||||||+|||++.++.                      ++.|+|||++.+..++.++
T Consensus       106 ~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~  183 (331)
T cd06649         106 GKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS  183 (331)
T ss_pred             HHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCCchH
Confidence            46789999999999982  46999999999999986643                      6789999999988899999


Q ss_pred             ceechhHHHHHHhhCCCccccc
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQ   81 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~   81 (291)
                      |||||||++|||++|+.||...
T Consensus       184 DiwslG~il~el~tg~~p~~~~  205 (331)
T cd06649         184 DIWSMGLSLVELAIGRYPIPPP  205 (331)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCC
Confidence            9999999999999999998643

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.87  E-value=4.9e-23  Score=180.35  Aligned_cols=119  Identities=23%  Similarity=0.292  Sum_probs=93.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||.|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  175 (318)
T cd05570          99 RFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGP  175 (318)
T ss_pred             HHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCc
Confidence            4678999999999999   99999999999999986532                        67899999999989999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......        .....+.....          ..+......+.+++.+||+.||++
T Consensus       176 ~~DiwslGvil~~l~~G~~pf~~~~~~--------~~~~~i~~~~~----------~~~~~~~~~~~~li~~~l~~dP~~  237 (318)
T cd05570         176 AVDWWALGVLLYEMLAGQSPFEGDDED--------ELFQSILEDEV----------RYPRWLSKEAKSILKSFLTKNPEK  237 (318)
T ss_pred             chhhhhHHHHHHHHhhCCCCCCCCCHH--------HHHHHHHcCCC----------CCCCcCCHHHHHHHHHHccCCHHH
Confidence            999999999999999999999644321        11111211111          111223467789999999999999


Q ss_pred             CCCC
Q 022858          138 MPSM  141 (291)
Q Consensus       138 RPs~  141 (291)
                      ||++
T Consensus       238 R~s~  241 (318)
T cd05570         238 RLGC  241 (318)
T ss_pred             cCCC
Confidence            9999

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.87  E-value=1.1e-22  Score=183.17  Aligned_cols=139  Identities=21%  Similarity=0.182  Sum_probs=96.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                          |+.|+|||++.+..+
T Consensus       188 ~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  264 (392)
T PHA03207        188 ITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPY  264 (392)
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCC
Confidence            5789999999999999   99999999999999986532                          678999999998899


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCc--c---------------chhhhhcccccc---
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGE--F---------------QDLIIVCGMEKN---  115 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~---------------~~~~~~~~~~~~---  115 (291)
                      +.++|||||||++|||++|+.||.......... ....+........  +               .....+....+.   
T Consensus       265 ~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~-~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (392)
T PHA03207        265 CAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSS-QLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIR  343 (392)
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHH-HHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhh
Confidence            999999999999999999999997654331111 1111111110000  0               000000000000   


Q ss_pred             hHHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          116 NKEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       116 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .......+.+++.+|++.||++||++.++
T Consensus       344 ~~~~~~~~~~li~~ml~~dp~~Rpsa~e~  372 (392)
T PHA03207        344 KYGMHMDVEYLIAKMLTFDQEFRPSAQDI  372 (392)
T ss_pred             ccCcchhHHHHHHHHhccChhhCCCHHHH
Confidence            00123456788999999999999999999

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=8.4e-23  Score=184.72  Aligned_cols=123  Identities=22%  Similarity=0.207  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC--------C-----------------CCccccCccccCC--CCc
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--------W-----------------TPGYAAPETWMSF--PVT   56 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~--------~-----------------t~~y~aPE~~~~~--~~~   56 (291)
                      +.+||++||.|||+   ..|||||||-.|+|++.--        +                 |..|||||++..+  .|.
T Consensus       680 YtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG  756 (1226)
T KOG4279|consen  680 YTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYG  756 (1226)
T ss_pred             HHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCC
Confidence            56899999999999   9999999999999997432        1                 8899999999876  588


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      ..+|||||||++.||.||++||......+         ..+.+-|.+.      ...+.+.+...+...++++|+..+|.
T Consensus       757 ~aADIWS~GCT~vEMATGrPPF~Elgspq---------AAMFkVGmyK------vHP~iPeelsaeak~FilrcFepd~~  821 (1226)
T KOG4279|consen  757 KAADIWSFGCTMVEMATGRPPFVELGSPQ---------AAMFKVGMYK------VHPPIPEELSAEAKNFILRCFEPDPC  821 (1226)
T ss_pred             chhhhhhccceeEeeccCCCCeeecCChh---------Hhhhhhccee------cCCCCcHHHHHHHHHHHHHHcCCCcc
Confidence            99999999999999999999997654331         1222222222      12345566778888999999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +||++.++
T Consensus       822 ~R~sA~~L  829 (1226)
T KOG4279|consen  822 DRPSAKDL  829 (1226)
T ss_pred             cCccHHHh
Confidence            99999998

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=7.8e-23  Score=180.18  Aligned_cols=130  Identities=19%  Similarity=0.231  Sum_probs=96.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCccccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                     ++.|+|||++.+..++.++|
T Consensus       104 ~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  180 (333)
T cd05600         104 RFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVD  180 (333)
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccc
Confidence            3578899999999999   99999999999999986643                     67899999999889999999


Q ss_pred             eechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCC
Q 022858           61 VRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPS  140 (291)
Q Consensus        61 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs  140 (291)
                      ||||||++|||++|..||.......        ....+...  ...................+.+++.+|++.+|++||+
T Consensus       181 vwslG~il~ell~g~~pf~~~~~~~--------~~~~i~~~--~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s  250 (333)
T cd05600         181 YWSLGCMLYEFLCGFPPFSGSTPNE--------TWENLKYW--KETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGS  250 (333)
T ss_pred             eecchHHHhhhhhCCCCCCCCCHHH--------HHHHHHhc--cccccCCCCCccccccCHHHHHHHHHHhhChhhhcCC
Confidence            9999999999999999997543221        11111110  0000000001111233567788999999999999999


Q ss_pred             CCcc
Q 022858          141 MTVR  144 (291)
Q Consensus       141 ~~~v  144 (291)
                      +.++
T Consensus       251 ~~~l  254 (333)
T cd05600         251 LEDI  254 (333)
T ss_pred             HHHH
Confidence            9998

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.87  E-value=1.4e-22  Score=174.00  Aligned_cols=131  Identities=19%  Similarity=0.210  Sum_probs=97.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      ..++.|++.||+|||+   .+|+|+||||+|||++.++.                      +..|+|||++.+..++.++
T Consensus        98 ~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  174 (279)
T cd06619          98 GRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHS  174 (279)
T ss_pred             HHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcc
Confidence            4688999999999999   99999999999999986643                      6689999999988899999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      ||||||+++|+|++|+.||............... .........     +   ..........+.+++.+|++.+|++||
T Consensus       175 DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~-----~---~~~~~~~~~~~~~li~~~l~~~P~~Rp  245 (279)
T cd06619         175 DVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL-LQCIVDEDP-----P---VLPVGQFSEKFVHFITQCMRKQPKERP  245 (279)
T ss_pred             hHHHHHHHHHHHHhCCCCchhhcccccccchHHH-HHHHhccCC-----C---CCCCCcCCHHHHHHHHHHhhCChhhCC
Confidence            9999999999999999998754432221111111 111111000     0   000111235678999999999999999


Q ss_pred             CCCcc
Q 022858          140 SMTVR  144 (291)
Q Consensus       140 s~~~v  144 (291)
                      ++.++
T Consensus       246 ~~~ei  250 (279)
T cd06619         246 APENL  250 (279)
T ss_pred             CHHHH
Confidence            99998

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.87  E-value=4.9e-23  Score=180.56  Aligned_cols=121  Identities=17%  Similarity=0.248  Sum_probs=93.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||+|||+   ++|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (321)
T cd05591          99 RFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGP  175 (321)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCccccCHHHHcCCCCCC
Confidence            4578999999999999   99999999999999986642                        67899999999889999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......        .....+..+..   .       .+......+.+++..|++.||++
T Consensus       176 ~~DvwslG~il~el~tg~~Pf~~~~~~--------~~~~~i~~~~~---~-------~p~~~~~~~~~ll~~~L~~dp~~  237 (321)
T cd05591         176 SVDWWALGVLMYEMMAGQPPFEADNED--------DLFESILHDDV---L-------YPVWLSKEAVSILKAFMTKNPNK  237 (321)
T ss_pred             ccceechhHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCC---C-------CCCCCCHHHHHHHHHHhccCHHH
Confidence            999999999999999999999754321        11112211111   0       11112356788999999999999


Q ss_pred             CCCCCc
Q 022858          138 MPSMTV  143 (291)
Q Consensus       138 RPs~~~  143 (291)
                      ||+..+
T Consensus       238 R~~~~~  243 (321)
T cd05591         238 RLGCVA  243 (321)
T ss_pred             cCCCCC
Confidence            996544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=4.6e-23  Score=178.27  Aligned_cols=118  Identities=22%  Similarity=0.215  Sum_probs=92.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCccccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      +.++.|++.||+|||+   ++|+||||||+|||++.++.                     ++.|+|||++.+..++.++|
T Consensus       104 ~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  180 (291)
T cd05612         104 LFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVD  180 (291)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhh
Confidence            4678999999999999   99999999999999986643                     67899999999888999999


Q ss_pred             eechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCC
Q 022858           61 VRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPS  140 (291)
Q Consensus        61 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs  140 (291)
                      ||||||++|||++|+.||......        .....+..+..          ..+......+.+++.+|++.||.+||+
T Consensus       181 iwSlG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~~----------~~~~~~~~~~~~li~~~l~~dp~~R~~  242 (291)
T cd05612         181 WWALGILIYEMLVGYPPFFDDNPF--------GIYEKILAGKL----------EFPRHLDLYAKDLIKKLLVVDRTRRLG  242 (291)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCc----------CCCccCCHHHHHHHHHHcCCCHHHccC
Confidence            999999999999999998654321        11222222111          111122356789999999999999996

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.87  E-value=6.8e-23  Score=177.62  Aligned_cols=125  Identities=20%  Similarity=0.212  Sum_probs=96.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.++.                        ++.|+|||.+.+..++.
T Consensus       119 ~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  195 (296)
T cd06654         119 AAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP  195 (296)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcCCCCCc
Confidence            5688999999999999   99999999999999986543                        45799999998888899


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......       .........+ ...       ...+......+.+++.+||+.+|++
T Consensus       196 ~~Dv~s~Gvil~~l~~g~~pf~~~~~~-------~~~~~~~~~~-~~~-------~~~~~~~~~~l~~li~~~l~~~p~~  260 (296)
T cd06654         196 KVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYLIATNG-TPE-------LQNPEKLSAIFRDFLNRCLDMDVEK  260 (296)
T ss_pred             cchHHHHHHHHHHHHhCCCCCCCCCHH-------HhHHHHhcCC-CCC-------CCCccccCHHHHHHHHHHCcCCccc
Confidence            999999999999999999999654321       1111111110 000       1112233466788999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       261 Rpt~~ei  267 (296)
T cd06654         261 RGSAKEL  267 (296)
T ss_pred             CcCHHHH
Confidence            9999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.87  E-value=1e-22  Score=178.60  Aligned_cols=122  Identities=23%  Similarity=0.232  Sum_probs=94.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+||+++.++.                        ++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (321)
T cd05603          99 RFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDR  175 (321)
T ss_pred             HHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCC
Confidence            3578999999999999   99999999999999986532                        66899999999888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|..||......        .....+....          ...+......+.+++.+|++.+|.+
T Consensus       176 ~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~  237 (321)
T cd05603         176 TVDWWCLGAVLYEMLYGLPPFYSRDVS--------QMYDNILHKP----------LQLPGGKTVAACDLLVGLLHKDQRR  237 (321)
T ss_pred             cCcccccchhhhhhhcCCCCCCCCCHH--------HHHHHHhcCC----------CCCCCCCCHHHHHHHHHHccCCHhh
Confidence            999999999999999999999654321        1111111111          0111223457889999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||+...-
T Consensus       238 R~~~~~~  244 (321)
T cd05603         238 RLGAKAD  244 (321)
T ss_pred             cCCCCCC
Confidence            9997633

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.87  E-value=1.5e-22  Score=173.22  Aligned_cols=78  Identities=32%  Similarity=0.463  Sum_probs=71.5

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------CCccccCccccCC
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------TPGYAAPETWMSF   53 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------t~~y~aPE~~~~~   53 (291)
                      .++.|+|.||++||+   ++||||||||+||||+.+..                             ++.|||||++...
T Consensus       113 ~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~  189 (429)
T KOG0595|consen  113 HFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQ  189 (429)
T ss_pred             HHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhc
Confidence            478899999999999   99999999999999987511                             8899999999999


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccc
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKA   83 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~   83 (291)
                      .|+.|+|+||.|+++||+++|+.||+....
T Consensus       190 ~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~  219 (429)
T KOG0595|consen  190 QYDAKADLWSIGTILYQCLTGKPPFDAETP  219 (429)
T ss_pred             cccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence            999999999999999999999999986553

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.87  E-value=6.1e-23  Score=180.61  Aligned_cols=118  Identities=24%  Similarity=0.222  Sum_probs=92.3

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCccccce
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV   61 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~Dv   61 (291)
                      .++.|++.||+|||+   .+|+||||||+|||++.++.                     ++.|+|||++.+..++.++||
T Consensus       122 ~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  198 (329)
T PTZ00263        122 FYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDW  198 (329)
T ss_pred             HHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCccee
Confidence            477899999999999   99999999999999987643                     678999999998889999999


Q ss_pred             echhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCCC
Q 022858           62 RSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSM  141 (291)
Q Consensus        62 ~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~  141 (291)
                      |||||++|||++|..||......        .....+..+...          .+......+.+++.+||+.||.+||+.
T Consensus       199 wslG~il~elltg~~pf~~~~~~--------~~~~~i~~~~~~----------~p~~~~~~~~~li~~~L~~dP~~R~~~  260 (329)
T PTZ00263        199 WTMGVLLYEFIAGYPPFFDDTPF--------RIYEKILAGRLK----------FPNWFDGRARDLVKGLLQTDHTKRLGT  260 (329)
T ss_pred             echHHHHHHHHcCCCCCCCCCHH--------HHHHHHhcCCcC----------CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            99999999999999998654321        112222222110          011123567889999999999999974

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.87  E-value=1.2e-23  Score=192.18  Aligned_cols=136  Identities=19%  Similarity=0.146  Sum_probs=116.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +-++++||.||.||-+   +++|||||..+|||++.|..                           .+.|.|||.+...+
T Consensus       734 VgMLrGIAsGMkYLsd---m~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RK  810 (996)
T KOG0196|consen  734 VGMLRGIASGMKYLSD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRK  810 (996)
T ss_pred             HHHHHHHHHHhHHHhh---cCchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcc
Confidence            4578999999999999   99999999999999997643                           57899999999999


Q ss_pred             CccccceechhHHHHHHh-hCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEIL-GRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.+||||||||++||++ .|.+||-+..+.        .+.+.         +......+.+.+|+..+..||+.|||+
T Consensus       811 FTsASDVWSyGIVmWEVmSyGERPYWdmSNQ--------dVIka---------Ie~gyRLPpPmDCP~aL~qLMldCWqk  873 (996)
T KOG0196|consen  811 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------DVIKA---------IEQGYRLPPPMDCPAALYQLMLDCWQK  873 (996)
T ss_pred             cCchhhccccceEEEEecccCCCcccccchH--------HHHHH---------HHhccCCCCCCCCcHHHHHHHHHHHHH
Confidence            999999999999999977 699998766543        12223         333455677889999999999999999


Q ss_pred             CCCCCCCCCccchhhhhhcccccccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSLASMLN  159 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~~~~~~  159 (291)
                      |-.+||.+.+|  +..|++....+..
T Consensus       874 dR~~RP~F~qi--V~~lDklIrnP~S  897 (996)
T KOG0196|consen  874 DRNRRPKFAQI--VSTLDKLIRNPNS  897 (996)
T ss_pred             HhhcCCCHHHH--HHHHHHHhcCchh
Confidence            99999999999  9999998876644

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.87  E-value=1.2e-22  Score=178.90  Aligned_cols=124  Identities=23%  Similarity=0.160  Sum_probs=92.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCC-CC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSF-PV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~-~~   55 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                         ++.|+|||++.+. .+
T Consensus       108 ~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  184 (332)
T cd05614         108 RFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGH  184 (332)
T ss_pred             HHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCC
Confidence            4578899999999999   99999999999999986532                         6789999998865 47


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++|||||||++|||++|..||......    .....+........          ...+......+.+++.+|++.||
T Consensus       185 ~~~~DiwslG~il~elltg~~pf~~~~~~----~~~~~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~~dp  250 (332)
T cd05614         185 GKAVDWWSLGILIFELLTGASPFTLEGER----NTQSEVSRRILKCD----------PPFPSFIGPEAQDLLHKLLRKDP  250 (332)
T ss_pred             CCccccccchhhhhhhhcCCCCCCCCCCC----CCHHHHHHHHhcCC----------CCCCCCCCHHHHHHHHHHcCCCH
Confidence            88999999999999999999999644321    11111222111110          01112234567889999999999


Q ss_pred             CCCCCCC
Q 022858          136 EAMPSMT  142 (291)
Q Consensus       136 ~~RPs~~  142 (291)
                      ++||++.
T Consensus       251 ~~R~~~~  257 (332)
T cd05614         251 KKRLGAG  257 (332)
T ss_pred             HHcCCCC
Confidence            9999654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.86  E-value=8.8e-23  Score=179.26  Aligned_cols=126  Identities=21%  Similarity=0.224  Sum_probs=97.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (325)
T cd05604          99 RFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDN  175 (325)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCC
Confidence            4578999999999999   99999999999999986542                        66899999999989999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|..||......        ...........          ...+.....+.+++.+|++.+|.+
T Consensus       176 ~~DvwslG~il~el~~G~~pf~~~~~~--------~~~~~~~~~~~----------~~~~~~~~~~~~ll~~ll~~~p~~  237 (325)
T cd05604         176 TVDWWCLGAVLYEMLYGLPPFYCRDVA--------EMYDNILHKPL----------VLRPGASLTAWSILEELLEKDRQR  237 (325)
T ss_pred             cCccccccceehhhhcCCCCCCCCCHH--------HHHHHHHcCCc----------cCCCCCCHHHHHHHHHHhccCHHh
Confidence            999999999999999999998654321        11112211111          001123356778999999999999


Q ss_pred             CCCCCccchhhhh
Q 022858          138 MPSMTVRPAKFML  150 (291)
Q Consensus       138 RPs~~~v~~~~~L  150 (291)
                      ||++.+.  +..+
T Consensus       238 R~~~~~~--~~~i  248 (325)
T cd05604         238 RLGAKED--FLEI  248 (325)
T ss_pred             cCCCCCC--HHHH
Confidence            9999765  4443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.86  E-value=1.9e-22  Score=177.54  Aligned_cols=128  Identities=18%  Similarity=0.235  Sum_probs=96.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||+|||+   ++|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus        99 ~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (329)
T cd05588          99 RFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGF  175 (329)
T ss_pred             HHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCC
Confidence            4688999999999999   99999999999999986532                        66799999999989999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCC-CCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSG-FPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      ++|||||||++|||++|+.||........ .....++..+.+.....          ..+......+.+++.+|++.||.
T Consensus       176 ~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~p~~~~~~~~~li~~~L~~dP~  245 (329)
T cd05588         176 SVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI----------RIPRSLSVKASSVLKGFLNKDPK  245 (329)
T ss_pred             ccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC----------CCCCCCCHHHHHHHHHHhccCHH
Confidence            99999999999999999999964332211 11122233333322211          11112345678899999999999


Q ss_pred             CCCCCC
Q 022858          137 AMPSMT  142 (291)
Q Consensus       137 ~RPs~~  142 (291)
                      +||++.
T Consensus       246 ~R~~~~  251 (329)
T cd05588         246 ERLGCH  251 (329)
T ss_pred             HcCCCC
Confidence            999853

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.86  E-value=7.3e-23  Score=184.32  Aligned_cols=131  Identities=18%  Similarity=0.192  Sum_probs=101.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++|+.|++.||+|||+   .+++||||||+|||++.+..                          +..|+|||.+.+..+
T Consensus       242 ~~~~~qi~~aL~~LH~---~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  318 (401)
T cd05107         242 VGFSYQVANGMEFLAS---KNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLY  318 (401)
T ss_pred             HHHHHHHHHHHHHHhc---CCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCC
Confidence            4688899999999999   99999999999999986432                          346999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..|+......       +........+.         ....+......+.+++.+||+.+
T Consensus       319 ~~~~DvwslGvil~e~l~~g~~P~~~~~~~-------~~~~~~~~~~~---------~~~~p~~~~~~l~~li~~cl~~~  382 (401)
T cd05107         319 TTLSDVWSFGILLWEIFTLGGTPYPELPMN-------EQFYNAIKRGY---------RMAKPAHASDEIYEIMQKCWEEK  382 (401)
T ss_pred             CcHhHHHHHHHHHHHHHHcCCCCCCCCCch-------HHHHHHHHcCC---------CCCCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999998 88887543211       11112222111         01112233568899999999999


Q ss_pred             CCCCCCCCccchhhhhhcc
Q 022858          135 PEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~  153 (291)
                      |.+||++.++  +..|++.
T Consensus       383 P~~RPs~~el--l~~L~~~  399 (401)
T cd05107         383 FEIRPDFSQL--VHLVGDL  399 (401)
T ss_pred             hhHCcCHHHH--HHHHHHH
Confidence            9999999999  9988765

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.86  E-value=4.5e-22  Score=176.00  Aligned_cols=136  Identities=16%  Similarity=0.202  Sum_probs=93.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccC-CCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMS-FPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~-~~~~~~~   59 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                     ++.|+|||++.+ ..++.++
T Consensus       121 ~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~  197 (343)
T cd07878         121 QFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTV  197 (343)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchh
Confidence            4688999999999999   99999999999999987643                     678999999876 4688999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHH-----------hhcCccchhhhh-cccccc-----hHHHHHH
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKK-----------LEKGEFQDLIIV-CGMEKN-----NKEKAER  122 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~-~~~~~~-----~~~~~~~  122 (291)
                      |||||||++|||++|+.||.......    ........           +........... ......     .......
T Consensus       198 DiwslG~il~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (343)
T cd07878         198 DIWSVGCIMAELLKGKALFPGNDYID----QLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPL  273 (343)
T ss_pred             hhHhHHHHHHHHHHCCCCCCCCCHHH----HHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHH
Confidence            99999999999999999986543210    00000000           000000000000 000000     0011234


Q ss_pred             HHHHHHHccccCCCCCCCCCcc
Q 022858          123 MALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       123 ~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +.+++.+|++.||++|||+.|+
T Consensus       274 ~~~li~~mL~~dp~~R~s~~el  295 (343)
T cd07878         274 AIDLLEKMLVLDSDKRISASEA  295 (343)
T ss_pred             HHHHHHHHcCCChhhCCCHHHH
Confidence            6789999999999999999999

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=1.1e-22  Score=172.82  Aligned_cols=124  Identities=22%  Similarity=0.160  Sum_probs=95.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      ..++.|++.||.|||+   .+++|+||||+||+++.++.                           +..|+|||++.+..
T Consensus       107 ~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  183 (263)
T cd06625         107 RKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEG  183 (263)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCC
Confidence            4678999999999999   99999999999999987542                           34699999999888


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||+|+++||+++|+.||......       ...........         ....+......+.+++.+|+..+
T Consensus       184 ~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~  247 (263)
T cd06625         184 YGRKADVWSVGCTVVEMLTEKPPWAEFEAM-------AAIFKIATQPT---------NPQLPSHVSPDARNFLRRTFVEN  247 (263)
T ss_pred             CCchhhhHHHHHHHHHHHhCCCCccccchH-------HHHHHHhccCC---------CCCCCccCCHHHHHHHHHHhhcC
Confidence            999999999999999999999998644221       11111111100         11112234467788999999999


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |++||++.++
T Consensus       248 p~~Rpt~~~l  257 (263)
T cd06625         248 AKKRPSAEEL  257 (263)
T ss_pred             cccCCCHHHH
Confidence            9999999988

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.86  E-value=1.3e-22  Score=176.56  Aligned_cols=125  Identities=22%  Similarity=0.166  Sum_probs=100.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------CCccccCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------TPGYAAPETWMS   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------t~~y~aPE~~~~   52 (291)
                      .+++.++..||+|||.   .+||||||||+|+||+.++.                             ||.+||||.+.+
T Consensus       213 r~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~  289 (576)
T KOG0585|consen  213 RKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSG  289 (576)
T ss_pred             HHHHHHHHHHHHHHHh---cCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcC
Confidence            3688999999999999   99999999999999997754                             999999999987


Q ss_pred             CC----CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHH
Q 022858           53 FP----VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVAL  128 (291)
Q Consensus        53 ~~----~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  128 (291)
                      +.    .+.+.||||+||+||.++.|+.||.+....        .+...        ++..++..+..++....+.+|+.
T Consensus       290 ~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~--------~l~~K--------Ivn~pL~fP~~pe~~e~~kDli~  353 (576)
T KOG0585|consen  290 GNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL--------ELFDK--------IVNDPLEFPENPEINEDLKDLIK  353 (576)
T ss_pred             CCCccccchhhhhhhhhhhHHHhhhccCCcccchHH--------HHHHH--------HhcCcccCCCcccccHHHHHHHH
Confidence            42    345689999999999999999999766432        11222        22223333444566788899999


Q ss_pred             HccccCCCCCCCCCccc
Q 022858          129 WRVQYKPEAMPSMTVRP  145 (291)
Q Consensus       129 ~cl~~~p~~RPs~~~v~  145 (291)
                      ++|++||++|.+..+|.
T Consensus       354 ~lL~KdP~~Ri~l~~ik  370 (576)
T KOG0585|consen  354 RLLEKDPEQRITLPDIK  370 (576)
T ss_pred             HHhhcChhheeehhhhe
Confidence            99999999999999983

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.86  E-value=7.1e-23  Score=174.96  Aligned_cols=124  Identities=19%  Similarity=0.177  Sum_probs=93.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCcccc-----C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWM-----S   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~-----~   52 (291)
                      ..++.|++.||+|||+   ++|+|+||||+||+++.+..                        +..|+|||++.     +
T Consensus       114 ~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  190 (272)
T cd06637         114 AYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPD  190 (272)
T ss_pred             HHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcC
Confidence            4588999999999999   99999999999999986643                        55799999986     3


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++|||||||++|||++|..|+......      ..  .........        ...........+.+++.+||+
T Consensus       191 ~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~------~~--~~~~~~~~~--------~~~~~~~~~~~~~~li~~~l~  254 (272)
T cd06637         191 ATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------RA--LFLIPRNPA--------PRLKSKKWSKKFQSFIESCLV  254 (272)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCccccCHH------HH--HHHHhcCCC--------CCCCCCCcCHHHHHHHHHHcC
Confidence            35788999999999999999999998643321      00  001111000        011112234578899999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .+|.+||++.++
T Consensus       255 ~~p~~Rpt~~~i  266 (272)
T cd06637         255 KNHSQRPTTEQL  266 (272)
T ss_pred             CChhhCCCHHHH
Confidence            999999999888

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.86  E-value=8.8e-23  Score=172.85  Aligned_cols=127  Identities=20%  Similarity=0.288  Sum_probs=97.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.+++.||+|||+   .+++|+||||+||+++.+..                         +..|+|||.+.+..++
T Consensus       103 ~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~  179 (256)
T cd05112         103 LGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYS  179 (256)
T ss_pred             HHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcC
Confidence            4678899999999999   89999999999999986432                         3479999999888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++||+++ |..||......        ........+.  ....+       ......+.+++.+|++.+|
T Consensus       180 ~~~Dv~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~--~~~~~-------~~~~~~~~~l~~~~l~~~p  242 (256)
T cd05112         180 SKSDVWSFGVLMWEVFSEGKTPYENRSNS--------EVVETINAGF--RLYKP-------RLASQSVYELMQHCWKERP  242 (256)
T ss_pred             hHHHHHHHHHHHHHHHcCCCCCCCcCCHH--------HHHHHHhCCC--CCCCC-------CCCCHHHHHHHHHHcccCh
Confidence            99999999999999998 88888643321        1111221110  00011       1124678999999999999


Q ss_pred             CCCCCCCccchhhhh
Q 022858          136 EAMPSMTVRPAKFML  150 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L  150 (291)
                      ++||++.++  ++.|
T Consensus       243 ~~Rp~~~~~--l~~l  255 (256)
T cd05112         243 EDRPSFSLL--LHQL  255 (256)
T ss_pred             hhCCCHHHH--HHhh
Confidence            999999999  8776

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.86  E-value=5.1e-23  Score=180.20  Aligned_cols=121  Identities=24%  Similarity=0.199  Sum_probs=94.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||.+.+..++.
T Consensus       101 ~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  177 (318)
T cd05582         101 KFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ  177 (318)
T ss_pred             HHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCC
Confidence            4688999999999999   99999999999999986543                        56799999999888899


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......        .....+.....          ..+......+.+++.+||+.||++
T Consensus       178 ~~DiwslG~il~el~tg~~p~~~~~~~--------~~~~~i~~~~~----------~~p~~~~~~~~~li~~~l~~~P~~  239 (318)
T cd05582         178 SADWWSFGVLMFEMLTGSLPFQGKDRK--------ETMTMILKAKL----------GMPQFLSPEAQSLLRALFKRNPAN  239 (318)
T ss_pred             ccceeccceEeeeeccCCCCCCCCCHH--------HHHHHHHcCCC----------CCCCCCCHHHHHHHHHHhhcCHhH
Confidence            999999999999999999998654321        11111111111          111223456788999999999999


Q ss_pred             CCCCCc
Q 022858          138 MPSMTV  143 (291)
Q Consensus       138 RPs~~~  143 (291)
                      ||++.+
T Consensus       240 R~~a~~  245 (318)
T cd05582         240 RLGAGP  245 (318)
T ss_pred             cCCCCC
Confidence            999877

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.86  E-value=1.1e-22  Score=178.55  Aligned_cols=117  Identities=25%  Similarity=0.262  Sum_probs=91.2

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCccc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      .++.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.+
T Consensus       104 ~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  180 (323)
T cd05584         104 FYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKA  180 (323)
T ss_pred             HHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCc
Confidence            467899999999999   99999999999999986543                        678999999998889999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|||||||++|||++|+.||......        .....+..+..          ..+......+.+++.+|++.+|++|
T Consensus       181 ~DiwslG~il~ell~G~~pf~~~~~~--------~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~R  242 (323)
T cd05584         181 VDWWSLGALMYDMLTGAPPFTAENRK--------KTIDKILKGKL----------NLPPYLTPEARDLLKKLLKRNPSSR  242 (323)
T ss_pred             ceecccHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCC----------CCCCCCCHHHHHHHHHHcccCHhHc
Confidence            99999999999999999999654321        11112222111          1112234567899999999999999


Q ss_pred             CC
Q 022858          139 PS  140 (291)
Q Consensus       139 Ps  140 (291)
                      |+
T Consensus       243 ~~  244 (323)
T cd05584         243 LG  244 (323)
T ss_pred             CC
Confidence            94

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.86  E-value=1.2e-22  Score=178.61  Aligned_cols=151  Identities=19%  Similarity=0.136  Sum_probs=100.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------------CCccccCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------------TPGYAAPETW   50 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------------t~~y~aPE~~   50 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                               +..|++||++
T Consensus       104 ~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  180 (328)
T cd08226         104 GNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELL  180 (328)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhh
Confidence            3688999999999999   99999999999999986531                               2359999998


Q ss_pred             cCC--CCccccceechhHHHHHHhhCCCccccccccCCCCch-------------hHHHHHH-------hhcCcc-----
Q 022858           51 MSF--PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSG-------------FKWVWKK-------LEKGEF-----  103 (291)
Q Consensus        51 ~~~--~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~-------------~~~~~~~-------~~~~~~-----  103 (291)
                      .+.  .++.++|||||||++|||++|..||............             ...-...       ...+..     
T Consensus       181 ~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (328)
T cd08226         181 RQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVA  260 (328)
T ss_pred             cCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhc
Confidence            763  5789999999999999999999998654321000000             0000000       000000     


Q ss_pred             ----chhhhhcccccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcccc
Q 022858          104 ----QDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       104 ----~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                          ..........+........+.+++.+||+.||++|||+.++.....+.....
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~  316 (328)
T cd08226         261 AGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE  316 (328)
T ss_pred             cccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence                0000011111223345678899999999999999999999954555555544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.86  E-value=2.5e-22  Score=170.19  Aligned_cols=126  Identities=21%  Similarity=0.180  Sum_probs=95.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-------C--------------------CCccccCccccCC-
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-------W--------------------TPGYAAPETWMSF-   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-------~--------------------t~~y~aPE~~~~~-   53 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.+.       .                    +..|+|||++... 
T Consensus       104 ~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~  180 (259)
T cd05037         104 LDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIPWIAPECIRNGQ  180 (259)
T ss_pred             HHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCCCCcccccccccccccCCCccChhhhcCCC
Confidence            5688999999999999   9999999999999998765       1                    5679999998876 


Q ss_pred             -CCccccceechhHHHHHHhhC-CCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcc
Q 022858           54 -PVTHKCDVRSFGMLLFEILGR-RRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRV  131 (291)
Q Consensus        54 -~~~~~~Dv~s~G~~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  131 (291)
                       .++.++||||||+++||+++| ..|+......       .+. ........        .   +......+.+++.+|+
T Consensus       181 ~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~-------~~~-~~~~~~~~--------~---~~~~~~~~~~li~~~l  241 (259)
T cd05037         181 ASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS-------EKE-RFYQDQHR--------L---PMPDCAELANLINQCW  241 (259)
T ss_pred             CCcchhhHHHHHHHHHHHHHhCCCCCcccCCch-------hHH-HHHhcCCC--------C---CCCCchHHHHHHHHHh
Confidence             788999999999999999984 6666443211       000 01111000        0   0001167889999999


Q ss_pred             ccCCCCCCCCCccchhhhhh
Q 022858          132 QYKPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       132 ~~~p~~RPs~~~v~~~~~L~  151 (291)
                      ..+|++||++.++  ++.|+
T Consensus       242 ~~~p~~Rpt~~~i--l~~l~  259 (259)
T cd05037         242 TYDPTKRPSFRAI--LRDLN  259 (259)
T ss_pred             ccChhhCCCHHHH--HHhcC
Confidence            9999999999999  87763

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.86  E-value=7e-23  Score=183.19  Aligned_cols=144  Identities=22%  Similarity=0.275  Sum_probs=98.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCC-CC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSF-PV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~-~~   55 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                         +..|+|||.+.+. .+
T Consensus       106 ~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  182 (372)
T cd07853         106 KVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHY  182 (372)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCC
Confidence            4578999999999999   99999999999999987643                         5679999998874 57


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCc----------cchhhhhcccc--------cchH
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGE----------FQDLIIVCGME--------KNNK  117 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~--------~~~~  117 (291)
                      +.++||||+||++|||++|+.||........    ...+........          ....+......        ....
T Consensus       183 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (372)
T cd07853         183 TSAVDIWSVGCIFAELLGRRILFQAQSPIQQ----LDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSS  258 (372)
T ss_pred             CcHHHHHhHHHHHHHHHcCCCCCCCCCHHHH----HHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCC
Confidence            8999999999999999999999975543210    000000000000          00000000000        0111


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCCCccchhhhhhc
Q 022858          118 EKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       118 ~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~  152 (291)
                      .....+.+++.+|++.||++|||+.|+.....+.+
T Consensus       259 ~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  293 (372)
T cd07853         259 QATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE  293 (372)
T ss_pred             CCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence            22457789999999999999999999933334444

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=4.5e-23  Score=179.30  Aligned_cols=133  Identities=19%  Similarity=0.279  Sum_probs=99.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-------C----------------CCccccCccccC-CCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-------W----------------TPGYAAPETWMS-FPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-------~----------------t~~y~aPE~~~~-~~~~~   57 (291)
                      .+|+.||++||+|+|.   +|+.|||+||+|||+..+.       +                |.+|.|||++.. +.|+.
T Consensus       113 rnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~  189 (538)
T KOG0661|consen  113 RNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSS  189 (538)
T ss_pred             HHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEecccccccccccCCCcchhhhcccccchHHhhhccccCC
Confidence            4799999999999999   9999999999999998332       2                889999999875 68999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhh---c---Cccch---h----------hhhcccccchHH
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLE---K---GEFQD---L----------IIVCGMEKNNKE  118 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~---~----------~~~~~~~~~~~~  118 (291)
                      +.||||+||+++|+.+-++.|.+....       +.+++..+   .   ..+.+   +          ..+.......+.
T Consensus       190 pvD~wA~GcI~aEl~sLrPLFPG~sE~-------Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~  262 (538)
T KOG0661|consen  190 PVDMWAVGCIMAELYSLRPLFPGASEI-------DQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPN  262 (538)
T ss_pred             chHHHHHHHHHHHHHHhcccCCCCcHH-------HHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcc
Confidence            999999999999999999988766532       22222110   0   00000   0          001111112233


Q ss_pred             HHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          119 KAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       119 ~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +....++++.+|++.||++|||+.|.
T Consensus       263 ~s~~~~~li~~ll~WDP~kRpTA~~a  288 (538)
T KOG0661|consen  263 ASSEAASLIERLLAWDPDKRPTASQA  288 (538)
T ss_pred             cCHHHHHHHHHHhcCCCccCccHHHH
Confidence            67788999999999999999999988

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.86  E-value=1.9e-22  Score=173.45  Aligned_cols=125  Identities=25%  Similarity=0.256  Sum_probs=93.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCcccc-----C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWM-----S   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~-----~   52 (291)
                      ..++.|++.||+|||+   .+++||||||+||+++.++.                        +..|+|||++.     +
T Consensus       106 ~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  182 (282)
T cd06643         106 RVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD  182 (282)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEccccccccccccccccccccccccccCHhhccccCCCC
Confidence            4688999999999999   99999999999999986542                        56799999874     3


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++|||||||++|||++|+.||......       ..... .........       ..+......+.+++.+||+
T Consensus       183 ~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-------~~~~~-~~~~~~~~~-------~~~~~~~~~~~~li~~~l~  247 (282)
T cd06643         183 RPYDYKADVWSLGITLIEMAQIEPPHHELNPM-------RVLLK-IAKSEPPTL-------AQPSRWSSEFKDFLKKCLE  247 (282)
T ss_pred             CCCCccchhhhHHHHHHHHccCCCCccccCHH-------HHHHH-HhhcCCCCC-------CCccccCHHHHHHHHHHcc
Confidence            45778999999999999999999998654321       11111 111110010       1112234678899999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .+|++||++.++
T Consensus       248 ~~p~~Rp~~~~i  259 (282)
T cd06643         248 KNVDARWTTTQL  259 (282)
T ss_pred             CChhhCcCHHHH
Confidence            999999999988

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.86  E-value=2.4e-22  Score=172.40  Aligned_cols=123  Identities=20%  Similarity=0.184  Sum_probs=95.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||.|||+   .+++|+||+|+||+++.++.                        +..|+|||++.+..++.
T Consensus       104 ~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  180 (277)
T cd06642         104 ATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDF  180 (277)
T ss_pred             HHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCch
Confidence            4578999999999999   99999999999999986542                        45799999999888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|..|+.......        .........         ...........+.+++.+|++.+|++
T Consensus       181 ~~Dv~slG~il~el~tg~~p~~~~~~~~--------~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~  243 (277)
T cd06642         181 KADIWSLGITAIELAKGEPPNSDLHPMR--------VLFLIPKNS---------PPTLEGQYSKPFKEFVEACLNKDPRF  243 (277)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCcccchhh--------HHhhhhcCC---------CCCCCcccCHHHHHHHHHHccCCccc
Confidence            9999999999999999999986443210        001111110         01112234467889999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       244 Rp~~~~i  250 (277)
T cd06642         244 RPTAKEL  250 (277)
T ss_pred             CcCHHHH
Confidence            9999999

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.86  E-value=1.9e-22  Score=176.99  Aligned_cols=121  Identities=21%  Similarity=0.278  Sum_probs=94.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus       104 ~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  180 (323)
T cd05615         104 VFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGK  180 (323)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCC
Confidence            4688999999999999   99999999999999986542                        67899999999888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......        .....+.....          ..+......+.+++.+|++.+|.+
T Consensus       181 ~~DiwslGvil~elltG~~pf~~~~~~--------~~~~~i~~~~~----------~~p~~~~~~~~~li~~~l~~~p~~  242 (323)
T cd05615         181 SVDWWAYGVLLYEMLAGQPPFDGEDED--------ELFQSIMEHNV----------SYPKSLSKEAVSICKGLMTKHPSK  242 (323)
T ss_pred             ccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCC----------CCCccCCHHHHHHHHHHcccCHhh
Confidence            999999999999999999998754321        11122211111          111223456788999999999999


Q ss_pred             CCCCCc
Q 022858          138 MPSMTV  143 (291)
Q Consensus       138 RPs~~~  143 (291)
                      |++..+
T Consensus       243 R~~~~~  248 (323)
T cd05615         243 RLGCGP  248 (323)
T ss_pred             CCCCCC
Confidence            998754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.86  E-value=1.2e-22  Score=178.57  Aligned_cols=126  Identities=20%  Similarity=0.238  Sum_probs=103.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ++++.|++.|+.|||+   ..|+|||||++||+++.+..                        |+.||+||.+.+.+|+.
T Consensus       109 ~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~  185 (426)
T KOG0589|consen  109 LKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNE  185 (426)
T ss_pred             HHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCc
Confidence            5788999999999998   99999999999999987643                        99999999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      |+||||+||++|||++-+++|......       . +...+.++         ...+.+......+..++..|++.+|+.
T Consensus       186 KSDiWsLGC~~yEm~~lk~aF~a~~m~-------~-Li~ki~~~---------~~~Plp~~ys~el~~lv~~~l~~~P~~  248 (426)
T KOG0589|consen  186 KSDIWSLGCCLYEMCTLKPAFKASNMS-------E-LILKINRG---------LYSPLPSMYSSELRSLVKSMLRKNPEH  248 (426)
T ss_pred             cCcchhhcchHHHHHhcccccCccchH-------H-HHHHHhhc---------cCCCCCccccHHHHHHHHHHhhcCCcc
Confidence            999999999999999999999766532       1 11111111         123444555678888999999999999


Q ss_pred             CCCCCccchhhh
Q 022858          138 MPSMTVRPAKFM  149 (291)
Q Consensus       138 RPs~~~v~~~~~  149 (291)
                      ||++.++  +.+
T Consensus       249 RPsa~~L--L~~  258 (426)
T KOG0589|consen  249 RPSALEL--LRR  258 (426)
T ss_pred             CCCHHHH--hhC
Confidence            9999999  655

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.86  E-value=1.7e-22  Score=170.86  Aligned_cols=125  Identities=22%  Similarity=0.208  Sum_probs=96.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||.|||+   .+++|+||+|+||+++.++.                        +..|+|||++.+..++.
T Consensus       102 ~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  178 (256)
T cd06612         102 AAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNN  178 (256)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCc
Confidence            4688999999999999   99999999999999986643                        45799999998888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|+.|+........       . ........       .....+......+.+++.+|++.+|++
T Consensus       179 ~~Di~s~G~il~~l~~g~~p~~~~~~~~~-------~-~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~l~~~P~~  243 (256)
T cd06612         179 KADIWSLGITAIEMAEGKPPYSDIHPMRA-------I-FMIPNKPP-------PTLSDPEKWSPEFNDFVKKCLVKDPEE  243 (256)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCcchhhh-------h-hhhccCCC-------CCCCchhhcCHHHHHHHHHHHhcChhh
Confidence            99999999999999999999875432210       0 00000000       001112233467889999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       244 Rps~~~i  250 (256)
T cd06612         244 RPSAIQL  250 (256)
T ss_pred             CcCHHHH
Confidence            9999998

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.86  E-value=1.9e-22  Score=172.10  Aligned_cols=130  Identities=22%  Similarity=0.259  Sum_probs=99.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ++++.|++.||.|||+.  .+++|+||||+||+++.++.                       +..|++||.+.+..++.+
T Consensus       116 ~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~  193 (269)
T cd08528         116 WNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEK  193 (269)
T ss_pred             HHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchH
Confidence            56889999999999962  68999999999999987653                       567999999998889999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +||||||+++|||++|+.||......       . .......+.....        ........+.+++.+|++.||++|
T Consensus       194 ~Dv~slG~ll~~l~~g~~p~~~~~~~-------~-~~~~~~~~~~~~~--------~~~~~~~~l~~li~~cl~~~p~~R  257 (269)
T cd08528         194 ADVWAFGCILYQMCTLQPPFYSTNML-------S-LATKIVEAVYEPL--------PEGMYSEDVTDVITSCLTPDAEAR  257 (269)
T ss_pred             HHHHHHHHHHHHHHhCCCcccccCHH-------H-HHHHHhhccCCcC--------CcccCCHHHHHHHHHHCCCCCccC
Confidence            99999999999999999998543221       1 1111111111110        011234678899999999999999


Q ss_pred             CCCCccchhhhhh
Q 022858          139 PSMTVRPAKFMLH  151 (291)
Q Consensus       139 Ps~~~v~~~~~L~  151 (291)
                      |++.|+  .++++
T Consensus       258 p~~~e~--~~~~~  268 (269)
T cd08528         258 PDIIQV--SAMIS  268 (269)
T ss_pred             CCHHHH--HHHhc
Confidence            999999  87764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.86  E-value=2e-22  Score=170.31  Aligned_cols=136  Identities=18%  Similarity=0.221  Sum_probs=98.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ..+..|++.||+|||+   ++|+||||||+|||++.++.                        |.+|.|||++.+. .|+
T Consensus       123 k~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys  199 (323)
T KOG0594|consen  123 KSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYS  199 (323)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCC
Confidence            3678999999999999   99999999999999998754                        8899999999986 799


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---Cccchhh-------------hhcccccchHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---GEFQDLI-------------IVCGMEKNNKEKA  120 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------~~~~~~~~~~~~~  120 (291)
                      ...||||+||++.||+++++.|.+....    .....+......   ..+..+.             .+.......+...
T Consensus       200 ~~vDiWs~GcIfaEm~~~~~LFpG~se~----~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~  275 (323)
T KOG0594|consen  200 TSVDIWSLGCIFAEMFTRRPLFPGDSEI----DQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLD  275 (323)
T ss_pred             CCcchHhHHHHHHHHHhCCCCCCCCcHH----HHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccC
Confidence            9999999999999999999998776542    111111111111   0111110             0000011111111


Q ss_pred             HHHHHHHHHccccCCCCCCCCCcc
Q 022858          121 ERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       121 ~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ....+++.+|++++|.+|.|+..+
T Consensus       276 ~~~~dll~~~L~y~p~~R~Sa~~a  299 (323)
T KOG0594|consen  276 PDGIELLSKLLQYDPAKRISAKGA  299 (323)
T ss_pred             ccHHHHHHHHhccCcccCcCHHHH
Confidence            467899999999999999999888

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.86  E-value=6e-23  Score=180.34  Aligned_cols=123  Identities=16%  Similarity=0.195  Sum_probs=93.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+.  .+|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus        98 ~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (325)
T cd05594          98 RFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGR  175 (325)
T ss_pred             HHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCC
Confidence            45789999999999962  69999999999999986642                        67899999999889999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|..||......        .....+.....          ..+......+.+++.+|++.||++
T Consensus       176 ~~DiwslG~il~el~tG~~Pf~~~~~~--------~~~~~i~~~~~----------~~p~~~~~~~~~li~~~L~~dP~~  237 (325)
T cd05594         176 AVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEEI----------RFPRTLSPEAKSLLSGLLKKDPKQ  237 (325)
T ss_pred             ccccccccceeeeeccCCCCCCCCCHH--------HHHHHHhcCCC----------CCCCCCCHHHHHHHHHHhhcCHHH
Confidence            999999999999999999998654321        11111111110          011122356788999999999999


Q ss_pred             CC-----CCCcc
Q 022858          138 MP-----SMTVR  144 (291)
Q Consensus       138 RP-----s~~~v  144 (291)
                      |+     ++.++
T Consensus       238 R~~~~~~~~~~i  249 (325)
T cd05594         238 RLGGGPDDAKEI  249 (325)
T ss_pred             hCCCCCCCHHHH
Confidence            97     56666

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.86  E-value=1.8e-22  Score=170.79  Aligned_cols=134  Identities=22%  Similarity=0.183  Sum_probs=99.5

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCccc
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVTHK   58 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~~~   58 (291)
                      +..||.+||+|||+   .+|+||||||+|+|+|.+.+                        |..|.|||.+.+. .|+.+
T Consensus       130 Yt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~  206 (364)
T KOG0658|consen  130 YTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTS  206 (364)
T ss_pred             HHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCce
Confidence            56899999999999   99999999999999997743                        7789999999885 79999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---------------CccchhhhhcccccchHHHHHHH
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---------------GEFQDLIIVCGMEKNNKEKAERM  123 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~  123 (291)
                      .||||.||++.||+-|++.|.+.+....    +..+.+.+..               ...+.+.......-.........
T Consensus       207 IDiWSaGCV~aELl~g~plFpG~s~~dQ----L~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~  282 (364)
T KOG0658|consen  207 IDIWSAGCVMAELLKGQPLFPGDSSVDQ----LVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDA  282 (364)
T ss_pred             eEEhhhhHHHHHHhcCCcccCCCCHHHH----HHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHH
Confidence            9999999999999999999987654311    1111111111               11111111111111233445778


Q ss_pred             HHHHHHccccCCCCCCCCCcc
Q 022858          124 ALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       124 ~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ++++.++++++|++|.++.|+
T Consensus       283 ~dll~~~L~Y~P~~R~~~~~~  303 (364)
T KOG0658|consen  283 LDLLSKLLQYSPSKRLSALEA  303 (364)
T ss_pred             HHHHHHHhccChhhcCCHHHH
Confidence            999999999999999999888

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.86  E-value=1.7e-22  Score=171.50  Aligned_cols=129  Identities=27%  Similarity=0.286  Sum_probs=99.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.+++.||+|||+   .+++|+||||+||+++.+..                         +..|+|||.+.+..++
T Consensus       106 ~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  182 (261)
T cd05034         106 VDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFT  182 (261)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcC
Confidence            5688999999999999   99999999999999986643                         2469999999988899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++||+++ |+.||......        ........+.         ....+...+..+.+++.+|++.+|
T Consensus       183 ~~~Di~slG~il~~l~t~g~~p~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~~p  245 (261)
T cd05034         183 IKSDVWSFGILLTEIVTYGRVPYPGMTNR--------EVLEQVERGY---------RMPRPPNCPEELYDLMLQCWDKDP  245 (261)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCC---------CCCCCCCCCHHHHHHHHHHcccCc
Confidence            99999999999999998 89888543211        1111111110         001112224678899999999999


Q ss_pred             CCCCCCCccchhhhhhc
Q 022858          136 EAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~  152 (291)
                      ++||++.++  .+.|+.
T Consensus       246 ~~Rp~~~~l--~~~l~~  260 (261)
T cd05034         246 EERPTFEYL--QSFLED  260 (261)
T ss_pred             ccCCCHHHH--HHHHhc
Confidence            999999999  877754

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=4.1e-22  Score=179.47  Aligned_cols=136  Identities=24%  Similarity=0.285  Sum_probs=109.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCc-c
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVT-H   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~-~   57 (291)
                      .+++.||+.|+.|+|.   .+|+||||||+|+|||.++.                       ++.|.|||++.+.+|+ .
T Consensus       115 a~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~  191 (786)
T KOG0588|consen  115 AHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGR  191 (786)
T ss_pred             HHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCC
Confidence            3688999999999999   99999999999999997654                       8899999999999887 5


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||.|||||-|+||+.||++...        ..+..++++|.+.          .+...+....+|+.+++..||..
T Consensus       192 ~sDVWSCGVILfALLtG~LPFdDdNi--------r~LLlKV~~G~f~----------MPs~Is~eaQdLLr~ml~VDp~~  253 (786)
T KOG0588|consen  192 PSDVWSCGVILFALLTGKLPFDDDNI--------RVLLLKVQRGVFE----------MPSNISSEAQDLLRRMLDVDPST  253 (786)
T ss_pred             ccccchhHHHHHHHHhCCCCCCCccH--------HHHHHHHHcCccc----------CCCcCCHHHHHHHHHHhccCccc
Confidence            69999999999999999999985542        2234444554332          22334467788889999999999


Q ss_pred             CCCCCccchhhhhhccccccc
Q 022858          138 MPSMTVRPAKFMLHGSLASML  158 (291)
Q Consensus       138 RPs~~~v~~~~~L~~~~~~~~  158 (291)
                      |.|+.||++.-.|.+-...+.
T Consensus       254 RiT~~eI~kHP~l~g~~~~~~  274 (786)
T KOG0588|consen  254 RITTEEILKHPFLSGYTSLPS  274 (786)
T ss_pred             cccHHHHhhCchhhcCCCCCh
Confidence            999999966666766655443

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.86  E-value=2.4e-22  Score=169.93  Aligned_cols=123  Identities=23%  Similarity=0.359  Sum_probs=95.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.+++.||+|||+   .+++|+||||+||+++.+..                        +..|+|||.+.+..++.
T Consensus       104 ~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  180 (256)
T cd08220         104 LHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQ  180 (256)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCc
Confidence            4678999999999999   99999999999999975432                        55799999998888899


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|+|++|..||......       ... .....+....         .+......+.+++.+||+.+|++
T Consensus       181 ~~Dv~slG~~l~~l~~~~~~~~~~~~~-------~~~-~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~  243 (256)
T cd08220         181 KSDIWALGCVLYELASLKRAFEAANLP-------ALV-LKIMSGTFAP---------ISDRYSPDLRQLILSMLNLDPSK  243 (256)
T ss_pred             ccchHHHHHHHHHHHhCCCCcccCchH-------HHH-HHHHhcCCCC---------CCCCcCHHHHHHHHHHccCChhh
Confidence            999999999999999999998654321       111 1111111111         11123467889999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       244 Rpt~~~l  250 (256)
T cd08220         244 RPQLSQI  250 (256)
T ss_pred             CCCHHHH
Confidence            9999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.86  E-value=2.3e-22  Score=170.61  Aligned_cols=126  Identities=22%  Similarity=0.319  Sum_probs=98.0

Q ss_pred             hhHHHHHHHHHHHHhcCC--CCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGC--QQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~--~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||..+  ..+++|+||||+||+++.++.                        ++.|+|||.+.+..+
T Consensus       108 ~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~  187 (265)
T cd08217         108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSY  187 (265)
T ss_pred             HHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcccccccccCCCccChhhhcCCCC
Confidence            468899999999999321  289999999999999986543                        667999999988889


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++|+||||+++|+|++|..|+.....        .........+..         ...+......+.+++.+|++.+|
T Consensus       188 ~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~l~~~p  250 (265)
T cd08217         188 DEKSDIWSLGCLIYELCALSPPFTARNQ--------LQLASKIKEGKF---------RRIPYRYSSELNEVIKSMLNVDP  250 (265)
T ss_pred             CchhHHHHHHHHHHHHHHCCCcccCcCH--------HHHHHHHhcCCC---------CCCccccCHHHHHHHHHHccCCc
Confidence            9999999999999999999999865431        112222222211         11223345778899999999999


Q ss_pred             CCCCCCCcc
Q 022858          136 EAMPSMTVR  144 (291)
Q Consensus       136 ~~RPs~~~v  144 (291)
                      ++||++.+|
T Consensus       251 ~~Rp~~~~i  259 (265)
T cd08217         251 DKRPSTEEL  259 (265)
T ss_pred             ccCCCHHHH
Confidence            999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.86  E-value=2.1e-22  Score=173.09  Aligned_cols=124  Identities=19%  Similarity=0.182  Sum_probs=93.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCcccc-----C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWM-----S   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~-----~   52 (291)
                      ..++.|++.||+|||+   .+|+|+||||+||+++.++.                        ++.|+|||.+.     .
T Consensus       124 ~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~  200 (282)
T cd06636         124 AYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPD  200 (282)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcC
Confidence            4578899999999999   99999999999999986543                        45699999876     3


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++||||||+++|||++|..||........       ... ...        ..............+.+++.+||+
T Consensus       201 ~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~-------~~~-~~~--------~~~~~~~~~~~~~~~~~li~~cl~  264 (282)
T cd06636         201 ATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA-------LFL-IPR--------NPPPKLKSKKWSKKFIDFIEGCLV  264 (282)
T ss_pred             cCCCcccchhHHHHHHHHHHhCCCCccccCHHhh-------hhh-Hhh--------CCCCCCcccccCHHHHHHHHHHhC
Confidence            4678899999999999999999999865432100       000 000        000011112344678999999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .||.+||++.|+
T Consensus       265 ~~p~~Rp~~~el  276 (282)
T cd06636         265 KNYLSRPSTEQL  276 (282)
T ss_pred             CChhhCcCHHHH
Confidence            999999999888

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.86  E-value=3.7e-22  Score=171.24  Aligned_cols=123  Identities=20%  Similarity=0.178  Sum_probs=97.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||+|||+   .+++|+||+|+||+++.++.                        +..|+|||++.+..++.
T Consensus       104 ~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~  180 (277)
T cd06640         104 ATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDS  180 (277)
T ss_pred             HHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhccCCCcc
Confidence            3578899999999999   99999999999999986542                        45699999998888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|+||||+++|||++|..|+.......        ........         .........+..+.+++.+||+.+|++
T Consensus       181 ~~Dv~slG~il~el~tg~~p~~~~~~~~--------~~~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~  243 (277)
T cd06640         181 KADIWSLGITAIELAKGEPPNSDMHPMR--------VLFLIPKN---------NPPTLTGEFSKPFKEFIDACLNKDPSF  243 (277)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCcChHh--------HhhhhhcC---------CCCCCchhhhHHHHHHHHHHcccCccc
Confidence            9999999999999999999986543210        00011111         111223445678889999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       244 Rp~~~~i  250 (277)
T cd06640         244 RPTAKEL  250 (277)
T ss_pred             CcCHHHH
Confidence            9999999

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=2.6e-22  Score=171.76  Aligned_cols=124  Identities=23%  Similarity=0.206  Sum_probs=95.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||.|||+   .+++|+||+|+||+++.++.                        ++.|+|||.+.+..++.
T Consensus       101 ~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  177 (274)
T cd06609         101 AFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDE  177 (274)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccChhhhccCCCCc
Confidence            4688999999999999   99999999999999997643                        45699999999888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++||+++|..||......       . ............+.        .......+.+++.+|+..+|++
T Consensus       178 ~sDv~slG~il~~l~tg~~p~~~~~~~-------~-~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~l~~~p~~  241 (274)
T cd06609         178 KADIWSLGITAIELAKGEPPLSDLHPM-------R-VLFLIPKNNPPSLE--------GNKFSKPFKDFVSLCLNKDPKE  241 (274)
T ss_pred             hhhHHHHHHHHHHHHhCCCCcccCchH-------H-HHHHhhhcCCCCCc--------ccccCHHHHHHHHHHhhCChhh
Confidence            999999999999999999998644321       0 11111111111110        0013457888999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       242 Rpt~~~i  248 (274)
T cd06609         242 RPSAKEL  248 (274)
T ss_pred             CcCHHHH
Confidence            9999999

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.86  E-value=2e-22  Score=174.73  Aligned_cols=135  Identities=18%  Similarity=0.175  Sum_probs=100.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.++.                        +..|+|||.+.+..++.
T Consensus       118 ~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  194 (296)
T cd06655         118 AAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP  194 (296)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCc
Confidence            5688999999999999   99999999999999986543                        45799999998888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|++++|+.||......       ..... ........       ...+......+.+++.+||+.+|++
T Consensus       195 ~~Dv~slGvil~~lltg~~pf~~~~~~-------~~~~~-~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~  259 (296)
T cd06655         195 KVDIWSLGIMAIEMVEGEPPYLNENPL-------RALYL-IATNGTPE-------LQNPEKLSPIFRDFLNRCLEMDVEK  259 (296)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHH-HHhcCCcc-------cCCcccCCHHHHHHHHHHhhcChhh
Confidence            999999999999999999998654321       11111 11110000       0112223456788999999999999


Q ss_pred             CCCCCccchhhhhhccc
Q 022858          138 MPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       138 RPs~~~v~~~~~L~~~~  154 (291)
                      ||++.++.....+....
T Consensus       260 Rpt~~~il~~~~~~~~~  276 (296)
T cd06655         260 RGSAKELLQHPFLKLAK  276 (296)
T ss_pred             CCCHHHHhhChHhhhcc
Confidence            99999995555554433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.86  E-value=2e-22  Score=173.27  Aligned_cols=137  Identities=15%  Similarity=0.122  Sum_probs=93.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      +.++.||+.||.|||+   .+|+||||||+||+++.++.                        +..|+|||++.+. .++
T Consensus       102 ~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  178 (284)
T cd07839         102 KSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS  178 (284)
T ss_pred             HHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccC
Confidence            5688999999999999   99999999999999986543                        5679999998764 478


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC---------ccchhhhhccc------ccchHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG---------EFQDLIIVCGM------EKNNKEKAE  121 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~------~~~~~~~~~  121 (291)
                      .++|||||||++|||++|..|+.......   .....+.......         ...+.......      ....+....
T Consensus       179 ~~~DiwslG~il~~l~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (284)
T cd07839         179 TSIDMWSAGCIFAELANAGRPLFPGNDVD---DQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNS  255 (284)
T ss_pred             cHHHHHHHHHHHHHHHhcCCCCcCCCCHH---HHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCH
Confidence            99999999999999999988864322110   0001010000000         00000000000      011112346


Q ss_pred             HHHHHHHHccccCCCCCCCCCcc
Q 022858          122 RMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       122 ~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .+.+++.+|++.||.+|||+.++
T Consensus       256 ~~~~li~~~l~~~P~~R~t~~~i  278 (284)
T cd07839         256 TGRDLLQNLLVCNPVQRISAEEA  278 (284)
T ss_pred             HHHHHHHHHhcCChhhcCCHHHH
Confidence            77899999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.85  E-value=1.4e-21  Score=166.89  Aligned_cols=132  Identities=17%  Similarity=0.166  Sum_probs=91.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccC---
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMS---   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~---   52 (291)
                      ..++.||+.||+|||+   .+++||||||+|||++.++.                          +..|+|||++..   
T Consensus       102 ~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  178 (268)
T cd05086         102 QRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHG  178 (268)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccC
Confidence            4678899999999999   99999999999999986532                          357999998753   


Q ss_pred             ----CCCccccceechhHHHHHHhhC-CCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHH
Q 022858           53 ----FPVTHKCDVRSFGMLLFEILGR-RRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVA  127 (291)
Q Consensus        53 ----~~~~~~~Dv~s~G~~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  127 (291)
                          ..++.++||||||+++|||+++ ..|+.....       .+....... +....+.++.....    ....+.+++
T Consensus       179 ~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~l~  246 (268)
T cd05086         179 GLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-------REVLNHVIK-DQQVKLFKPQLELP----YSERWYEVL  246 (268)
T ss_pred             ccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHh-hcccccCCCccCCC----CcHHHHHHH
Confidence                2457889999999999999974 556643321       111111111 11122222221111    235667788


Q ss_pred             HHccccCCCCCCCCCccchhhhhh
Q 022858          128 LWRVQYKPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       128 ~~cl~~~p~~RPs~~~v~~~~~L~  151 (291)
                      ..|| .+|++||++.+|  ++.|.
T Consensus       247 ~~c~-~~P~~Rp~~~~i--~~~l~  267 (268)
T cd05086         247 QFCW-LSPEKRATAEEV--HRLLT  267 (268)
T ss_pred             HHHh-hCcccCCCHHHH--HHHhc
Confidence            8899 579999999999  88763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.85  E-value=6.4e-22  Score=168.93  Aligned_cols=131  Identities=18%  Similarity=0.204  Sum_probs=92.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccC---
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMS---   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~---   52 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||++..   
T Consensus       103 ~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  179 (269)
T cd05042         103 QRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQ  179 (269)
T ss_pred             HHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccc
Confidence            4688999999999999   99999999999999987643                          245999998642   


Q ss_pred             ----CCCccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHH
Q 022858           53 ----FPVTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVA  127 (291)
Q Consensus        53 ----~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  127 (291)
                          ..++.++|||||||++|||++ |..||......       +........ .......+    .........+.+++
T Consensus       180 ~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-------~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~  247 (269)
T cd05042         180 DLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE-------QVLKQVVRE-QDIKLPKP----QLDLKYSDRWYEVM  247 (269)
T ss_pred             cccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH-------HHHHHHhhc-cCccCCCC----cccccCCHHHHHHH
Confidence                356789999999999999998 67777543321       111111111 11111111    11223345666778


Q ss_pred             HHccccCCCCCCCCCccchhhhh
Q 022858          128 LWRVQYKPEAMPSMTVRPAKFML  150 (291)
Q Consensus       128 ~~cl~~~p~~RPs~~~v~~~~~L  150 (291)
                      ..|+ .||++||++.+|  ++.|
T Consensus       248 ~~~~-~dp~~Rpt~~~v--~~~l  267 (269)
T cd05042         248 QFCW-LDPETRPTAEEV--HELL  267 (269)
T ss_pred             HHHh-cCcccccCHHHH--HHHh
Confidence            8888 599999999999  7766

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.85  E-value=1.6e-22  Score=178.73  Aligned_cols=117  Identities=21%  Similarity=0.212  Sum_probs=91.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCccccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                     |+.|+|||++.+..++.++|
T Consensus       134 ~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  210 (340)
T PTZ00426        134 CFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAAD  210 (340)
T ss_pred             HHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCcccc
Confidence            4578999999999999   99999999999999986643                     67899999999888999999


Q ss_pred             eechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           61 VRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        61 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      ||||||++|||++|..||......        .....+..+...          .+......+.+++.+|++.+|++|+
T Consensus       211 iwSlGvil~ell~G~~Pf~~~~~~--------~~~~~i~~~~~~----------~p~~~~~~~~~li~~~l~~dp~~R~  271 (340)
T PTZ00426        211 WWTLGIFIYEILVGCPPFYANEPL--------LIYQKILEGIIY----------FPKFLDNNCKHLMKKLLSHDLTKRY  271 (340)
T ss_pred             ccchhhHHHHHhcCCCCCCCCCHH--------HHHHHHhcCCCC----------CCCCCCHHHHHHHHHHcccCHHHcC
Confidence            999999999999999999754321        122222222110          1112234567899999999999996

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.85  E-value=3.5e-22  Score=184.99  Aligned_cols=74  Identities=26%  Similarity=0.320  Sum_probs=66.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      ..|+.|++.||+|||+   ++||||||||+|||++.++.                         +..|+|||++.+..++
T Consensus       270 ~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  346 (501)
T PHA03210        270 RAIMKQLLCAVEYIHD---KKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYC  346 (501)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCC
Confidence            3588999999999999   99999999999999986532                         7789999999998999


Q ss_pred             cccceechhHHHHHHhhCCCcc
Q 022858           57 HKCDVRSFGMLLFEILGRRRMR   78 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~   78 (291)
                      .++|||||||++|||++|..++
T Consensus       347 ~~~DiwSlGvil~ell~~~~~p  368 (501)
T PHA03210        347 EITDIWSCGLILLDMLSHDFCP  368 (501)
T ss_pred             cHHHHHHHHHHHHHHHHCCCCC
Confidence            9999999999999999987543

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.85  E-value=1.2e-21  Score=167.22  Aligned_cols=132  Identities=20%  Similarity=0.214  Sum_probs=92.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCC--
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSF--   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~--   53 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.+..                          +..|+|||++.+.  
T Consensus       103 ~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  179 (269)
T cd05087         103 QRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHG  179 (269)
T ss_pred             HHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccc
Confidence            3578899999999999   99999999999999986532                          3469999988642  


Q ss_pred             -----CCccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHH
Q 022858           54 -----PVTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVA  127 (291)
Q Consensus        54 -----~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  127 (291)
                           .++.++||||||+++|||++ |..||......        ................+...    ......+.+++
T Consensus       180 ~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~  247 (269)
T cd05087         180 NLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE--------QVLTYTVREQQLKLPKPRLK----LPLSDRWYEVM  247 (269)
T ss_pred             cccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH--------HHHHHHhhcccCCCCCCccC----CCCChHHHHHH
Confidence                 35789999999999999996 99998644321        01111111111111111111    11234567788


Q ss_pred             HHccccCCCCCCCCCccchhhhhh
Q 022858          128 LWRVQYKPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       128 ~~cl~~~p~~RPs~~~v~~~~~L~  151 (291)
                      ..|+ .+|++||++.+|  +..|+
T Consensus       248 ~~c~-~~P~~Rpt~~~l--~~~l~  268 (269)
T cd05087         248 QFCW-LQPEQRPSAEEV--HLLLS  268 (269)
T ss_pred             HHHh-cCcccCCCHHHH--HHHhc
Confidence            8998 589999999999  87764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.85  E-value=2.5e-22  Score=171.88  Aligned_cols=129  Identities=19%  Similarity=0.217  Sum_probs=98.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.++.                         ++.|+|||.+.+..++
T Consensus       120 ~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  196 (275)
T cd05046         120 VALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFS  196 (275)
T ss_pred             HHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCC
Confidence            4688999999999999   99999999999999986543                         3459999999888889


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++|++++ |..||......        ........+....        ......+..+.+++.+|++.+|
T Consensus       197 ~~~Di~slG~~l~~l~~~~~~p~~~~~~~--------~~~~~~~~~~~~~--------~~~~~~~~~l~~~i~~~l~~~p  260 (275)
T cd05046         197 TKSDVWSFGVLMWEVFTQGELPFYGLSDE--------EVLNRLQAGKLEL--------PVPEGCPSRLYKLMTRCWAVNP  260 (275)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCccccchH--------HHHHHHHcCCcCC--------CCCCCCCHHHHHHHHHHcCCCc
Confidence            99999999999999998 77777533211        1111122111110        0112234678899999999999


Q ss_pred             CCCCCCCccchhhhhh
Q 022858          136 EAMPSMTVRPAKFMLH  151 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~  151 (291)
                      ++||++.++  +..|.
T Consensus       261 ~~Rp~~~~~--l~~l~  274 (275)
T cd05046         261 KDRPSFSEL--VSALG  274 (275)
T ss_pred             ccCCCHHHH--HHHhc
Confidence            999999999  88764

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.85  E-value=4.9e-22  Score=169.56  Aligned_cols=125  Identities=20%  Similarity=0.134  Sum_probs=92.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCC--C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSF--P   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~--~   54 (291)
                      ..++.|++.||+|||+   .+|+||||||+||+++.+..                         +..|+|||++...  .
T Consensus       111 ~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~  187 (268)
T cd06624         111 IFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRG  187 (268)
T ss_pred             HHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhcccccc
Confidence            3578899999999999   99999999999999975321                         5689999998654  3


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||||+++|+|++|..|+.......    ..  ........         .....+......+.+++.+|++.+
T Consensus       188 ~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~----~~--~~~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~  252 (268)
T cd06624         188 YGAPADIWSLGCTIVEMATGKPPFIELGEPQ----AA--MFKVGMFK---------IHPEIPESLSAEAKNFILRCFEPD  252 (268)
T ss_pred             CCchhhhHHHHHHHHHHHhCCCCCccccChh----hh--Hhhhhhhc---------cCCCCCcccCHHHHHHHHHHcCCC
Confidence            7889999999999999999999986432110    00  00000000         001112234467888999999999


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |++||++.++
T Consensus       253 p~~Rpt~~~l  262 (268)
T cd06624         253 PDKRASAHDL  262 (268)
T ss_pred             chhCCCHHHH
Confidence            9999999988

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=2.7e-22  Score=172.95  Aligned_cols=124  Identities=23%  Similarity=0.262  Sum_probs=93.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..++.|++.||.|||+   .+|+||||||+||+++.+..                       ++.|+|||++.+..++.+
T Consensus       105 ~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  181 (285)
T cd05605         105 VFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFS  181 (285)
T ss_pred             HHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCcc
Confidence            4678999999999999   99999999999999986532                       568999999998889999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +||||+|+++||+++|..||......    .....+...+...          ....+......+.+++.+|++.||++|
T Consensus       182 ~Diws~G~~l~el~~g~~pf~~~~~~----~~~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~P~~R  247 (285)
T cd05605         182 PDWWGLGCLIYEMIEGKSPFRQRKEK----VKREEVERRVKED----------QEEYSEKFSEAARSICRQLLTKDPGFR  247 (285)
T ss_pred             ccchhHHHHHHHHHHCCCCCCCCchh----hHHHHHHHHhhhc----------ccccCcccCHHHHHHHHHHccCCHHHh
Confidence            99999999999999999999754321    0111111111110          011122345678899999999999999


Q ss_pred             CCCC
Q 022858          139 PSMT  142 (291)
Q Consensus       139 Ps~~  142 (291)
                      |++.
T Consensus       248 ~~~~  251 (285)
T cd05605         248 LGCR  251 (285)
T ss_pred             cCCC
Confidence            9543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=7.3e-22  Score=174.61  Aligned_cols=124  Identities=19%  Similarity=0.218  Sum_probs=91.8

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccC------C-------------------CCCccccCccccCC----
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK------F-------------------WTPGYAAPETWMSF----   53 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~------~-------------------~t~~y~aPE~~~~~----   53 (291)
                      .+..|++.|+.++|.   ++|||.||||.|+|+-..      +                   +|+-||+||.+...    
T Consensus       464 ~ywkqML~aV~~IH~---~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~  540 (677)
T KOG0596|consen  464 FYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSR  540 (677)
T ss_pred             HHHHHHHHHHHHHHH---hceeecCCCcccEEEEeeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccc
Confidence            467899999999999   999999999999987432      1                   29999999988632    


Q ss_pred             -------CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccch-HHHHHHHHH
Q 022858           54 -------PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNN-KEKAERMAL  125 (291)
Q Consensus        54 -------~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  125 (291)
                             +.+.++||||+||+||+|+.|++||......          +..+     ..+.+|...-+.+ .....++++
T Consensus       541 ~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~----------~aKl-----~aI~~P~~~Iefp~~~~~~~li~  605 (677)
T KOG0596|consen  541 ENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ----------IAKL-----HAITDPNHEIEFPDIPENDELID  605 (677)
T ss_pred             cCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH----------HHHH-----HhhcCCCccccccCCCCchHHHH
Confidence                   3668899999999999999999999654321          1111     1222331111111 111123899


Q ss_pred             HHHHccccCCCCCCCCCcc
Q 022858          126 VALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v  144 (291)
                      +|..||+.||++||++.++
T Consensus       606 ~mK~CL~rdPkkR~si~eL  624 (677)
T KOG0596|consen  606 VMKCCLARDPKKRWSIPEL  624 (677)
T ss_pred             HHHHHHhcCcccCCCcHHH
Confidence            9999999999999999999

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.85  E-value=2e-22  Score=173.37  Aligned_cols=140  Identities=19%  Similarity=0.259  Sum_probs=93.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ..++.|++.||+|||+   .+++|+||||+||+++.++.                        ++.|+|||.+.+. .++
T Consensus       104 ~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  180 (285)
T cd07861         104 KSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYS  180 (285)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcC
Confidence            4588999999999999   99999999999999986643                        5679999988654 578


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhH-------HHHHHhhc-Cccchhhhh---cccccchHHHHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFK-------WVWKKLEK-GEFQDLIIV---CGMEKNNKEKAERMAL  125 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~  125 (291)
                      .++||||||+++|||+||+.||..............       ..++.... .........   ............++.+
T Consensus       181 ~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (285)
T cd07861         181 TPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLD  260 (285)
T ss_pred             cHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHH
Confidence            899999999999999999999875432100000000       00000000 000000000   0000001123456789


Q ss_pred             HHHHccccCCCCCCCCCcc
Q 022858          126 VALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v  144 (291)
                      ++.+||+.||++|||+.++
T Consensus       261 li~~~l~~dP~~Rpt~~~l  279 (285)
T cd07861         261 LLEKMLIYDPAKRISAKKA  279 (285)
T ss_pred             HHHHHhcCChhhCCCHHHH
Confidence            9999999999999999888

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.85  E-value=2.5e-22  Score=175.08  Aligned_cols=148  Identities=16%  Similarity=0.227  Sum_probs=97.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||.+.+ ..++
T Consensus       107 ~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  183 (309)
T cd07872         107 KIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYS  183 (309)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCC
Confidence            3578899999999999   99999999999999986542                        667999998865 4688


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchh-------HHHHHHhhcC-ccchhhhhccc----ccchHHHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGF-------KWVWKKLEKG-EFQDLIIVCGM----EKNNKEKAERMA  124 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~  124 (291)
                      .++||||||+++|||++|+.||.............       ...++.+... .......+...    ..........+.
T Consensus       184 ~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (309)
T cd07872         184 TQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGI  263 (309)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHH
Confidence            99999999999999999999996554221000000       0000000000 00000000000    001112345678


Q ss_pred             HHHHHccccCCCCCCCCCccchhhhhhc
Q 022858          125 LVALWRVQYKPEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       125 ~l~~~cl~~~p~~RPs~~~v~~~~~L~~  152 (291)
                      +++.+|++.||.+|||+.|+.....++.
T Consensus       264 ~li~~~L~~dp~~R~t~~e~l~h~~~~~  291 (309)
T cd07872         264 ELLTKFLQYESKKRISAEEAMKHAYFRS  291 (309)
T ss_pred             HHHHHhccCChhhCCCHHHHhcChhhhh
Confidence            9999999999999999999933334443

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.85  E-value=2e-21  Score=169.59  Aligned_cols=137  Identities=18%  Similarity=0.134  Sum_probs=94.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------------CCccccCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------------TPGYAAPETW   50 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------------t~~y~aPE~~   50 (291)
                      ..++.|++.||+|||+   .+|+||||||+||+++.++.                               +..|+|||.+
T Consensus       104 ~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  180 (314)
T cd08216         104 AFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVL  180 (314)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHh
Confidence            4578999999999999   99999999999999986432                               3469999998


Q ss_pred             cC--CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHH----hhc-------Cccch----hhhh----
Q 022858           51 MS--FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKK----LEK-------GEFQD----LIIV----  109 (291)
Q Consensus        51 ~~--~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~----~~~-------~~~~~----~~~~----  109 (291)
                      ..  ..++.++|||||||++|||++|..||........   ..+.....    +..       .....    ..++    
T Consensus       181 ~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (314)
T cd08216         181 QQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM---LLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRD  257 (314)
T ss_pred             cCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHhccCccccccCchhhhcCCcCcccccccccchhh
Confidence            76  3588999999999999999999999975432100   00000000    000       00000    0000    


Q ss_pred             cccccchHHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          110 CGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       110 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .............+.+++.+||+.||++||++.++
T Consensus       258 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l  292 (314)
T cd08216         258 SVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQL  292 (314)
T ss_pred             hhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHH
Confidence            00011122334678889999999999999999999

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.85  E-value=4.2e-22  Score=168.69  Aligned_cols=123  Identities=21%  Similarity=0.301  Sum_probs=96.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ++++.|++.||.|||+   .+++|+||+|+||+++.+..                        ++.|+|||++.+..++.
T Consensus       104 ~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~  180 (256)
T cd08218         104 LDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNN  180 (256)
T ss_pred             HHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCC
Confidence            5688999999999999   99999999999999986543                        45799999998888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|+||||++++++++|..|+.....       .+.+. ....+...         ..+......+.+++.+|++.+|++
T Consensus       181 ~~Dv~slG~i~~~l~~g~~~~~~~~~-------~~~~~-~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~  243 (256)
T cd08218         181 KSDIWALGCVLYEMCTLKHAFEAGNM-------KNLVL-KIIRGSYP---------PVSSHYSYDLRNLVSQLFKRNPRD  243 (256)
T ss_pred             ccchhHHHHHHHHHHcCCCCccCCCH-------HHHHH-HHhcCCCC---------CCcccCCHHHHHHHHHHhhCChhh
Confidence            99999999999999999999864322       11111 11111111         112234567889999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.+|
T Consensus       244 Rp~~~~v  250 (256)
T cd08218         244 RPSVNSI  250 (256)
T ss_pred             CcCHHHH
Confidence            9999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=2.1e-22  Score=178.54  Aligned_cols=125  Identities=23%  Similarity=0.282  Sum_probs=94.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------------------   40 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------------------   40 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                                         
T Consensus       104 ~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (350)
T cd05573         104 RFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDH  180 (350)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccccccccccccccccccccccc
Confidence            4578999999999999   99999999999999975432                                         


Q ss_pred             ------------CCccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhh
Q 022858           41 ------------TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLII  108 (291)
Q Consensus        41 ------------t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (291)
                                  ++.|+|||++.+..++.++|||||||++|||++|+.||......       . ....+... ....  
T Consensus       181 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~-------~-~~~~i~~~-~~~~--  249 (350)
T cd05573         181 KQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ-------E-TYNKIINW-KESL--  249 (350)
T ss_pred             ccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH-------H-HHHHHhcc-CCcc--
Confidence                        56799999999999999999999999999999999999755421       1 11111110 0000  


Q ss_pred             hcccccchHHHHHHHHHHHHHccccCCCCCCC-CCcc
Q 022858          109 VCGMEKNNKEKAERMALVALWRVQYKPEAMPS-MTVR  144 (291)
Q Consensus       109 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs-~~~v  144 (291)
                         ..+........+.+++.+|++ +|.+||+ +.++
T Consensus       250 ---~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~l  282 (350)
T cd05573         250 ---RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEI  282 (350)
T ss_pred             ---cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHH
Confidence               001111134677888899997 9999999 8888

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.85  E-value=4.5e-22  Score=169.62  Aligned_cols=123  Identities=23%  Similarity=0.181  Sum_probs=90.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   .+|+|+||||+||+++.++.                           +..|+|||.+.+..
T Consensus       109 ~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  185 (266)
T cd06651         109 RKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEG  185 (266)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCC
Confidence            4688999999999999   99999999999999986542                           44699999998888


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++|||||||++||+++|+.||......       ..+........         ....+......+..++ .||..+
T Consensus       186 ~~~~~Dv~slG~i~~el~~g~~pf~~~~~~-------~~~~~~~~~~~---------~~~~~~~~~~~~~~li-~~~~~~  248 (266)
T cd06651         186 YGRKADVWSLGCTVVEMLTEKPPWAEYEAM-------AAIFKIATQPT---------NPQLPSHISEHARDFL-GCIFVE  248 (266)
T ss_pred             CCchhhhHHHHHHHHHHHHCCCCccccchH-------HHHHHHhcCCC---------CCCCchhcCHHHHHHH-HHhcCC
Confidence            999999999999999999999998644211       11111111100         0111122233444454 788899


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |++||++.|+
T Consensus       249 p~~Rp~~~ei  258 (266)
T cd06651         249 ARHRPSAEEL  258 (266)
T ss_pred             hhhCcCHHHH
Confidence            9999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.85  E-value=1.1e-21  Score=172.93  Aligned_cols=78  Identities=26%  Similarity=0.383  Sum_probs=68.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      ..++.|++.||.|||+.  .+|+||||||+|||++.++.                      +..|+|||++.+..++.++
T Consensus       106 ~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  183 (333)
T cd06650         106 GKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS  183 (333)
T ss_pred             HHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCCCcHH
Confidence            46788999999999972  47999999999999986542                      6689999999888899999


Q ss_pred             ceechhHHHHHHhhCCCccccc
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQ   81 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~   81 (291)
                      |||||||++||+++|+.||...
T Consensus       184 DvwslG~il~~l~~g~~p~~~~  205 (333)
T cd06650         184 DIWSMGLSLVEMAIGRYPIPPP  205 (333)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCc
Confidence            9999999999999999998643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.85  E-value=3.7e-22  Score=172.08  Aligned_cols=126  Identities=23%  Similarity=0.246  Sum_probs=94.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.++.|++.||.|||+   .+|+||||||+||+++.++.                       +..|+|||++.+..++.+
T Consensus       105 ~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~  181 (285)
T cd05630         105 VFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS  181 (285)
T ss_pred             HHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCc
Confidence            4678999999999999   99999999999999986432                       568999999998899999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +||||||+++|||++|+.||........    ..........     ..     ..........+.+++..||+.||++|
T Consensus       182 ~DiwslG~~l~~l~~g~~Pf~~~~~~~~----~~~~~~~~~~-----~~-----~~~~~~~~~~~~~li~~~l~~~p~~R  247 (285)
T cd05630         182 PDWWALGCLLYEMIAGQSPFQQRKKKIK----REEVERLVKE-----VQ-----EEYSEKFSPDARSLCKMLLCKDPKER  247 (285)
T ss_pred             cccHHHHHHHHHHHhCCCCCCCCCccch----HHHHHhhhhh-----hh-----hhcCccCCHHHHHHHHHHhhcCHHHc
Confidence            9999999999999999999975432100    0000000000     00     01112234567889999999999999


Q ss_pred             CC-----CCcc
Q 022858          139 PS-----MTVR  144 (291)
Q Consensus       139 Ps-----~~~v  144 (291)
                      |+     +.|+
T Consensus       248 ~s~~~~~~~~~  258 (285)
T cd05630         248 LGCQGGGAREV  258 (285)
T ss_pred             cCCCCCchHHH
Confidence            99     5566

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.85  E-value=4.2e-22  Score=169.81  Aligned_cols=130  Identities=20%  Similarity=0.190  Sum_probs=94.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCcccc---CCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWM---SFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~---~~~   54 (291)
                      ..++.|++.||+|||+   .+|+||||||+||+++.++.                        +..|+|||.+.   ...
T Consensus       109 ~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  185 (267)
T cd06646         109 AYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGG  185 (267)
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCHhHcccccCCC
Confidence            4578999999999999   99999999999999986643                        46799999874   345


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||||+++|||++|+.|+..........        ........   .+.  ..........+.+++.+||+.+
T Consensus       186 ~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~--------~~~~~~~~---~~~--~~~~~~~~~~~~~li~~~l~~~  252 (267)
T cd06646         186 YNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--------LMSKSNFQ---PPK--LKDKTKWSSTFHNFVKISLTKN  252 (267)
T ss_pred             CcchhhHHHHHHHHHHHHhCCCCccccchhhhhe--------eeecCCCC---CCC--CccccccCHHHHHHHHHHhhCC
Confidence            7889999999999999999999986443221100        00000000   000  0001123467889999999999


Q ss_pred             CCCCCCCCccchhhh
Q 022858          135 PEAMPSMTVRPAKFM  149 (291)
Q Consensus       135 p~~RPs~~~v~~~~~  149 (291)
                      |++||++.++  ++.
T Consensus       253 P~~Rp~~~~i--l~~  265 (267)
T cd06646         253 PKKRPTAERL--LTH  265 (267)
T ss_pred             hhhCcCHHHH--hcC
Confidence            9999999998  654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.85  E-value=9.5e-22  Score=171.28  Aligned_cols=124  Identities=24%  Similarity=0.267  Sum_probs=94.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------CCccccCcccc---CCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------TPGYAAPETWM---SFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------t~~y~aPE~~~---~~~~~~~   58 (291)
                      ..++.|++.||.|||+   .+|+|+||+|+||+++.++.                    +..|+|||++.   ...++.+
T Consensus       118 ~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  194 (307)
T cd06607         118 AAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDEGQYDGK  194 (307)
T ss_pred             HHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCCccccCceeeeccCCCCCCcc
Confidence            4688999999999999   99999999999999987643                    56799999874   3568889


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +||||||+++|||++|..|+......       .... ........        ..........+.+++.+||+.+|++|
T Consensus       195 sDv~s~G~il~el~tg~~p~~~~~~~-------~~~~-~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~R  258 (307)
T cd06607         195 VDVWSLGITCIELAERKPPLFNMNAM-------SALY-HIAQNDSP--------TLSSNDWSDYFRNFVDSCLQKIPQDR  258 (307)
T ss_pred             cchHHHHHHHHHHHcCCCCCCCccHH-------HHHH-HHhcCCCC--------CCCchhhCHHHHHHHHHHhcCChhhC
Confidence            99999999999999999998644321       1011 11111000        11122345678999999999999999


Q ss_pred             CCCCcc
Q 022858          139 PSMTVR  144 (291)
Q Consensus       139 Ps~~~v  144 (291)
                      |++.++
T Consensus       259 p~~~~i  264 (307)
T cd06607         259 PSSEEL  264 (307)
T ss_pred             cCHHHH
Confidence            999999

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.85  E-value=4.7e-22  Score=169.39  Aligned_cols=123  Identities=21%  Similarity=0.202  Sum_probs=95.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------------CCccccCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------------TPGYAAPETWM   51 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------------t~~y~aPE~~~   51 (291)
                      ..++.|++.||+|||+   .+++||||||+||+++.+..                              +..|+|||.+.
T Consensus       109 ~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~  185 (267)
T cd06628         109 RNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVK  185 (267)
T ss_pred             HHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhc
Confidence            4688999999999999   99999999999999986542                              35699999998


Q ss_pred             CCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcc
Q 022858           52 SFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRV  131 (291)
Q Consensus        52 ~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  131 (291)
                      +..++.++|+||||+++|+|++|+.||......       ..+.. ....         .....+......+.+++.+||
T Consensus       186 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~-~~~~---------~~~~~~~~~~~~~~~li~~~l  248 (267)
T cd06628         186 QTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL-------QAIFK-IGEN---------ASPEIPSNISSEAIDFLEKTF  248 (267)
T ss_pred             cCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH-------HHHHH-Hhcc---------CCCcCCcccCHHHHHHHHHHc
Confidence            888899999999999999999999998654321       11111 1111         011122234567889999999


Q ss_pred             ccCCCCCCCCCcc
Q 022858          132 QYKPEAMPSMTVR  144 (291)
Q Consensus       132 ~~~p~~RPs~~~v  144 (291)
                      +.+|++||++.++
T Consensus       249 ~~~p~~Rp~~~~i  261 (267)
T cd06628         249 EIDHNKRPTAAEL  261 (267)
T ss_pred             cCCchhCcCHHHH
Confidence            9999999999888

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.85  E-value=5.2e-22  Score=171.16  Aligned_cols=135  Identities=21%  Similarity=0.207  Sum_probs=97.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCC---CC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSF---PV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~---~~   55 (291)
                      ..++.+++.||+|||+.  .+++||||||+||+++.++.                       +..|+|||++.+.   .+
T Consensus       110 ~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  187 (288)
T cd06616         110 GKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGY  187 (288)
T ss_pred             HHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCC
Confidence            46889999999999972  59999999999999986532                       5679999998765   68


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||||+++||+++|+.||.....      ..+...... .+....     ............+.+++.+|++.+|
T Consensus       188 ~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p  255 (288)
T cd06616         188 DVRSDVWSLGITLYEVATGKFPYPKWNS------VFDQLTQVV-KGDPPI-----LSNSEEREFSPSFVNFINLCLIKDE  255 (288)
T ss_pred             cchhhhhHHHHHHHHHHhCCCCchhcch------HHHHHhhhc-CCCCCc-----CCCcCCCccCHHHHHHHHHHccCCh
Confidence            8999999999999999999999864321      111111111 111111     1111112345678999999999999


Q ss_pred             CCCCCCCccchhhhh
Q 022858          136 EAMPSMTVRPAKFML  150 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L  150 (291)
                      ++||++.+|.....+
T Consensus       256 ~~Rpt~~~i~~~~~~  270 (288)
T cd06616         256 SKRPKYKELLEHPFI  270 (288)
T ss_pred             hhCcCHHHHhcChhh
Confidence            999999999333334

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=1e-21  Score=166.75  Aligned_cols=127  Identities=22%  Similarity=0.227  Sum_probs=95.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC---C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF---P   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~---~   54 (291)
                      ..++.|++.||+|||+   .+++|+||||+||+++.++.                        +..|+|||.+...   .
T Consensus       104 ~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~  180 (262)
T cd06613         104 AYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGG  180 (262)
T ss_pred             HHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCC
Confidence            4688999999999999   99999999999999996643                        4569999998776   7


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||||+++|||++|..|+......       .... ......+.    + ............+.+++.+|++.+
T Consensus       181 ~~~~~Di~slG~~l~~~~tg~~p~~~~~~~-------~~~~-~~~~~~~~----~-~~~~~~~~~~~~~~~li~~~l~~~  247 (262)
T cd06613         181 YDGKCDIWALGITAIELAELQPPMFDLHPM-------RALF-LISKSNFP----P-PKLKDKEKWSPVFHDFIKKCLTKD  247 (262)
T ss_pred             cCchhhhHHHHHHHHHHHhCCCCCCCCCHH-------HHHH-HHHhccCC----C-ccccchhhhhHHHHHHHHHHcCCC
Confidence            889999999999999999999998654321       0011 11111000    0 001112234567889999999999


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |.+||++.++
T Consensus       248 p~~Rpt~~~i  257 (262)
T cd06613         248 PKKRPTATKL  257 (262)
T ss_pred             hhhCCCHHHH
Confidence            9999999988

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.85  E-value=1.3e-21  Score=175.53  Aligned_cols=133  Identities=20%  Similarity=0.191  Sum_probs=106.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      .++++||+.||.|||+.. +||||||||..||+++.+.+                       ||.+||||+.. ..|+..
T Consensus       146 k~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~  223 (632)
T KOG0584|consen  146 KSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNEL  223 (632)
T ss_pred             HHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhccccceeccCccccChHHHh-hhcchh
Confidence            468999999999999964 89999999999999998765                       99999999877 689999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +||||||+.++||+|+..||..-..       ...+++.+..|.-+..+..-        .-..+.+++.+|+.. .+.|
T Consensus       224 VDVYaFGMCmLEMvT~eYPYsEC~n-------~AQIYKKV~SGiKP~sl~kV--------~dPevr~fIekCl~~-~~~R  287 (632)
T KOG0584|consen  224 VDVYAFGMCMLEMVTSEYPYSECTN-------PAQIYKKVTSGIKPAALSKV--------KDPEVREFIEKCLAT-KSER  287 (632)
T ss_pred             hhhhhhhHHHHHHHhccCChhhhCC-------HHHHHHHHHcCCCHHHhhcc--------CCHHHHHHHHHHhcC-chhc
Confidence            9999999999999999999975543       34566666665444333220        124677888999999 9999


Q ss_pred             CCCCccchhhhhhc
Q 022858          139 PSMTVRPAKFMLHG  152 (291)
Q Consensus       139 Ps~~~v~~~~~L~~  152 (291)
                      ||+.|+++-..|..
T Consensus       288 ~sa~eLL~d~Ff~~  301 (632)
T KOG0584|consen  288 LSAKELLKDPFFDE  301 (632)
T ss_pred             cCHHHHhhChhhcc
Confidence            99999943333444

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.85  E-value=7.4e-22  Score=167.17  Aligned_cols=126  Identities=21%  Similarity=0.266  Sum_probs=97.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||+|||+   .+++|+||||+||+++.+..                        ++.|+|||.+.+..++.
T Consensus       104 ~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~  180 (256)
T cd08221         104 LWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNF  180 (256)
T ss_pred             HHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCC
Confidence            4678999999999999   89999999999999986543                        57899999998888899


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|..||......       + ....+..+...         .........+.+++.+|++.+|++
T Consensus       181 ~~Dv~slG~i~~~l~~g~~~~~~~~~~-------~-~~~~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~~p~~  243 (256)
T cd08221         181 KSDIWALGCVLYELLTLKRTFDATNPL-------N-LVVKIVQGNYT---------PVVSVYSSELISLVHSLLQQDPEK  243 (256)
T ss_pred             cchhHHHHHHHHHHHHCCCCCCCCCHH-------H-HHHHHHcCCCC---------CCccccCHHHHHHHHHHcccCccc
Confidence            999999999999999999998643321       1 11111222211         111233467889999999999999


Q ss_pred             CCCCCccchhhh
Q 022858          138 MPSMTVRPAKFM  149 (291)
Q Consensus       138 RPs~~~v~~~~~  149 (291)
                      ||++.++  +..
T Consensus       244 R~s~~~l--l~~  253 (256)
T cd08221         244 RPTADEV--LDQ  253 (256)
T ss_pred             CCCHHHH--hhC
Confidence            9999998  553

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.85  E-value=6.5e-22  Score=170.55  Aligned_cols=125  Identities=20%  Similarity=0.280  Sum_probs=96.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||+|||+   .+++||||+|+||+++.++.                        ++.|+|||.+.+..++.
T Consensus       118 ~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  194 (285)
T cd06648         118 ATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGT  194 (285)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCC
Confidence            4688999999999999   99999999999999987543                        45799999998888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|+.||.....       .... ..........       ..........+.+++.+|++.+|++
T Consensus       195 ~~Dv~slGv~l~ell~g~~p~~~~~~-------~~~~-~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~  259 (285)
T cd06648         195 EVDIWSLGIMVIEMVDGEPPYFNEPP-------LQAM-KRIRDNLPPK-------LKNLHKVSPRLRSFLDRMLVRDPAQ  259 (285)
T ss_pred             cccHHHHHHHHHHHHhCCCCCcCCCH-------HHHH-HHHHhcCCCC-------CcccccCCHHHHHHHHHHcccChhh
Confidence            99999999999999999999864322       1111 1111111000       0111123467899999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       260 Rpt~~~i  266 (285)
T cd06648         260 RATAAEL  266 (285)
T ss_pred             CcCHHHH
Confidence            9999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.85  E-value=1.1e-22  Score=178.85  Aligned_cols=125  Identities=20%  Similarity=0.214  Sum_probs=92.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCcccc-----
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWM-----   51 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~-----   51 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                         ++.|+|||++.     
T Consensus       105 ~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  181 (330)
T cd05601         105 QFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGD  181 (330)
T ss_pred             HHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhcccccc
Confidence            3578899999999999   99999999999999986543                         66799999987     


Q ss_pred             -CCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHc
Q 022858           52 -SFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWR  130 (291)
Q Consensus        52 -~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c  130 (291)
                       ...++.++|||||||++|||++|+.||......       ...............       +........+.+++..|
T Consensus       182 ~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-------~~~~~i~~~~~~~~~-------~~~~~~~~~~~~li~~l  247 (330)
T cd05601         182 GKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-------KTYNNIMNFQRFLKF-------PEDPKVSSDFLDLIQSL  247 (330)
T ss_pred             ccCCCCCcceeecccceeeeeccCCCCCCCCCHH-------HHHHHHHcCCCccCC-------CCCCCCCHHHHHHHHHH
Confidence             456789999999999999999999999654321       111111111111110       11112345677888899


Q ss_pred             cccCCCCCCCCCcc
Q 022858          131 VQYKPEAMPSMTVR  144 (291)
Q Consensus       131 l~~~p~~RPs~~~v  144 (291)
                      ++ +|++||++.++
T Consensus       248 l~-~p~~R~t~~~l  260 (330)
T cd05601         248 LC-GQKERLGYEGL  260 (330)
T ss_pred             cc-ChhhCCCHHHH
Confidence            97 99999999988

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.85  E-value=2e-22  Score=170.80  Aligned_cols=129  Identities=31%  Similarity=0.389  Sum_probs=96.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCcccc-CCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWM-SFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~-~~~~~   56 (291)
                      +.++.|++.||+|||+   .+|+|+||||+||+++.++.                        +..|+|||.+. +...+
T Consensus       101 ~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  177 (260)
T PF00069_consen  101 LKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYT  177 (260)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBS
T ss_pred             cccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            5789999999999999   99999999999999995542                        66899999998 77899


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++||||+|+++|+|++|..|+......    ...........    .......   .........+.+++..|++.||+
T Consensus       178 ~~~Di~slG~il~~l~~~~~p~~~~~~~----~~~~~~~~~~~----~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~  246 (260)
T PF00069_consen  178 RKSDIWSLGIILYELLTGKLPFEESNSD----DQLEIIEKILK----RPLPSSS---QQSREKSEELRDLIKKMLSKDPE  246 (260)
T ss_dssp             THHHHHHHHHHHHHHHHSSSSSTTSSHH----HHHHHHHHHHH----THHHHHT---TSHTTSHHHHHHHHHHHSSSSGG
T ss_pred             ccccccccccccccccccccccccccch----hhhhhhhhccc----ccccccc---cccchhHHHHHHHHHHHccCChh
Confidence            9999999999999999999998755111    00010111110    0111110   00111127889999999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +||++.++
T Consensus       247 ~R~~~~~l  254 (260)
T PF00069_consen  247 QRPSAEEL  254 (260)
T ss_dssp             GSTTHHHH
T ss_pred             HCcCHHHH
Confidence            99999888

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.85  E-value=7.2e-22  Score=167.07  Aligned_cols=127  Identities=24%  Similarity=0.273  Sum_probs=97.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      ..++.|++.||+|||+   .+++|+||||+||+++.+..                         ++.|+|||.+.+..++
T Consensus       106 ~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~  182 (258)
T smart00219      106 LSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFT  182 (258)
T ss_pred             HHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCC
Confidence            5688999999999999   99999999999999997752                         3679999999888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||+|++++||++ |..|+.....        .........+...         ......+..+.+++.+|+..+|
T Consensus       183 ~~~Di~slG~i~~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~~p  245 (258)
T smart00219      183 SKSDVWSFGVLLWEIFTLGESPYPGMSN--------EEVLEYLKKGYRL---------PKPENCPPEIYKLMLQCWAEDP  245 (258)
T ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhcCCCC---------CCCCcCCHHHHHHHHHHCcCCh
Confidence            99999999999999998 7777754321        1111222221111         1112245678889999999999


Q ss_pred             CCCCCCCccchhhhh
Q 022858          136 EAMPSMTVRPAKFML  150 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L  150 (291)
                      ++|||+.++  ++.|
T Consensus       246 ~~Rpt~~~l--l~~l  258 (258)
T smart00219      246 EDRPTFSEL--VEIL  258 (258)
T ss_pred             hhCcCHHHH--HhhC
Confidence            999999998  6654

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.85  E-value=6.1e-22  Score=171.05  Aligned_cols=125  Identities=26%  Similarity=0.272  Sum_probs=93.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC----
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF----   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~----   53 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.++.                        +..|+|||.+...    
T Consensus       131 ~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  207 (291)
T cd06639         131 SYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYD  207 (291)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcc
Confidence            4688999999999999   99999999999999986543                        4679999987643    


Q ss_pred             -CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           54 -PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        54 -~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                       .++.++|||||||++|||++|+.|+......       ..+.. +.......+.+       .......+.+++.+|++
T Consensus       208 ~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~-------~~~~~-~~~~~~~~~~~-------~~~~~~~l~~li~~~l~  272 (291)
T cd06639         208 YSYDARCDVWSLGITAIELGDGDPPLFDMHPV-------KTLFK-IPRNPPPTLLH-------PEKWCRSFNHFISQCLI  272 (291)
T ss_pred             cccCCccchHHHHHHHHHHhhCCCCCCCCcHH-------HHHHH-HhcCCCCCCCc-------ccccCHHHHHHHHHHhh
Confidence             3688999999999999999999998644321       11111 11111111111       12233568899999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .+|++||++.++
T Consensus       273 ~~p~~Rps~~~i  284 (291)
T cd06639         273 KDFEARPSVTHL  284 (291)
T ss_pred             cChhhCcCHHHH
Confidence            999999999998

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.85  E-value=8.7e-22  Score=169.18  Aligned_cols=125  Identities=20%  Similarity=0.225  Sum_probs=93.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCC-CeEeecCCCCcEEEccCCC-----------------------CCccccCccccC----C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQ-QIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMS----F   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~-~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~----~   53 (291)
                      ++++.|++.||+|||+   + +++||||||+||+++.++.                       +..|+|||.+.+    .
T Consensus       106 ~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  182 (283)
T cd06617         106 GKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK  182 (283)
T ss_pred             HHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccCCccccChhhcCCccccc
Confidence            4789999999999998   6 9999999999999986542                       557999998864    3


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      .++.++|+||||+++|||++|+.|+......      .+...... .+....+        .....+..+.+++.+||+.
T Consensus       183 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~-~~~~~~~--------~~~~~~~~l~~li~~~l~~  247 (283)
T cd06617         183 GYDVKSDVWSLGITMIELATGRFPYDSWKTP------FQQLKQVV-EEPSPQL--------PAEKFSPEFQDFVNKCLKK  247 (283)
T ss_pred             ccCccccchhhHHHHHHHHhCCCCCCccccC------HHHHHHHH-hcCCCCC--------CccccCHHHHHHHHHHccC
Confidence            5688999999999999999999998543211      11111111 1111111        0112346788999999999


Q ss_pred             CCCCCCCCCcc
Q 022858          134 KPEAMPSMTVR  144 (291)
Q Consensus       134 ~p~~RPs~~~v  144 (291)
                      +|++||++.++
T Consensus       248 ~p~~Rp~~~~i  258 (283)
T cd06617         248 NYKERPNYPEL  258 (283)
T ss_pred             ChhhCcCHHHH
Confidence            99999999999

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.85  E-value=4.7e-22  Score=171.40  Aligned_cols=124  Identities=23%  Similarity=0.250  Sum_probs=93.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.++.|++.||.|||+   ++|+||||||+||+++.+..                       +..|+|||.+.+..++.+
T Consensus       105 ~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~  181 (285)
T cd05632         105 LFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLS  181 (285)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcc
Confidence            5688999999999999   99999999999999986532                       678999999988889999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|+||||+++||+++|..||.......    ....+........          ..........+.+++..|++.||++|
T Consensus       182 ~Di~slG~~l~~l~~g~~P~~~~~~~~----~~~~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~~~P~~R  247 (285)
T cd05632         182 PDYWGLGCLIYEMIEGQSPFRGRKEKV----KREEVDRRVLETE----------EVYSAKFSEEAKSICKMLLTKDPKQR  247 (285)
T ss_pred             cchHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhhhccc----------cccCccCCHHHHHHHHHHccCCHhHc
Confidence            999999999999999999986543210    0011111111110          01112234567889999999999999


Q ss_pred             CCCC
Q 022858          139 PSMT  142 (291)
Q Consensus       139 Ps~~  142 (291)
                      |++.
T Consensus       248 ~~~~  251 (285)
T cd05632         248 LGCQ  251 (285)
T ss_pred             CCCc
Confidence            9954

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.84  E-value=2.2e-21  Score=172.07  Aligned_cols=121  Identities=25%  Similarity=0.275  Sum_probs=99.6

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCccc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      .|+.|+..||.|||+   ++|+|||+||+|||++.++.                        ||.|||||.+.+.+|+..
T Consensus       104 ~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~  180 (808)
T KOG0597|consen  104 AIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHT  180 (808)
T ss_pred             HHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccch
Confidence            588999999999999   99999999999999998764                        999999999999999999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|+||+||++||+.+|++||.....       .+ +.+.+...       +   ...+......+..+....+.+||.+|
T Consensus       181 sDlWslGcilYE~~~G~PPF~a~si-------~~-Lv~~I~~d-------~---v~~p~~~S~~f~nfl~gLL~kdP~~R  242 (808)
T KOG0597|consen  181 SDLWSLGCILYELYVGQPPFYARSI-------TQ-LVKSILKD-------P---VKPPSTASSSFVNFLQGLLIKDPAQR  242 (808)
T ss_pred             hhHHHHHHHHHHHhcCCCCchHHHH-------HH-HHHHHhcC-------C---CCCcccccHHHHHHHHHHhhcChhhc
Confidence            9999999999999999999975542       11 22222111       1   12233556778888889999999999


Q ss_pred             CCCCcc
Q 022858          139 PSMTVR  144 (291)
Q Consensus       139 Ps~~~v  144 (291)
                      -+..++
T Consensus       243 ltW~~L  248 (808)
T KOG0597|consen  243 LTWTDL  248 (808)
T ss_pred             ccHHHH
Confidence            999888

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.84  E-value=2.6e-22  Score=170.98  Aligned_cols=129  Identities=20%  Similarity=0.207  Sum_probs=106.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.|++|||.   +++||.||..+|.++|+...                          +..||+||.+.+..|
T Consensus       399 V~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~y  475 (563)
T KOG1024|consen  399 VLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHY  475 (563)
T ss_pred             HHHHHHHHHHHHHHHh---cCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhh
Confidence            4578999999999999   99999999999999985432                          778999999999999


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +..+||||||+++|||+| |+.|+..-++.        .....+.+|         ....++.+|+.++..+|.-||...
T Consensus       476 ssasDvWsfGVllWELmtlg~~PyaeIDPf--------Em~~ylkdG---------yRlaQP~NCPDeLf~vMacCWall  538 (563)
T KOG1024|consen  476 SSASDVWSFGVLLWELMTLGKLPYAEIDPF--------EMEHYLKDG---------YRLAQPFNCPDELFTVMACCWALL  538 (563)
T ss_pred             cchhhhHHHHHHHHHHHhcCCCCccccCHH--------HHHHHHhcc---------ceecCCCCCcHHHHHHHHHHHhcC
Confidence            999999999999999985 88888765543        122333332         334456678899999999999999


Q ss_pred             CCCCCCCCccchhhhhhc
Q 022858          135 PEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~  152 (291)
                      |++||++.|+  +.=|.+
T Consensus       539 peeRPsf~Ql--v~cLse  554 (563)
T KOG1024|consen  539 PEERPSFSQL--VICLSE  554 (563)
T ss_pred             cccCCCHHHH--HHHHHH
Confidence            9999999999  766644

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.84  E-value=6.1e-22  Score=171.35  Aligned_cols=125  Identities=18%  Similarity=0.296  Sum_probs=94.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+||+++.++.                        +..|+|||.+.+..++.
T Consensus       121 ~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  197 (292)
T cd06658         121 ATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGT  197 (292)
T ss_pred             HHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCc
Confidence            5688999999999999   99999999999999986543                        56799999998888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++||+++|..||......       . ........ ....+      .........+.+++.+|++.+|.+
T Consensus       198 ~~Dv~slGvil~el~~g~~p~~~~~~~-------~-~~~~~~~~-~~~~~------~~~~~~~~~~~~li~~~l~~~P~~  262 (292)
T cd06658         198 EVDIWSLGIMVIEMIDGEPPYFNEPPL-------Q-AMRRIRDN-LPPRV------KDSHKVSSVLRGFLDLMLVREPSQ  262 (292)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHH-------H-HHHHHHhc-CCCcc------ccccccCHHHHHHHHHHccCChhH
Confidence            999999999999999999998643321       0 11111110 00000      011122346778899999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       263 Rpt~~~i  269 (292)
T cd06658         263 RATAQEL  269 (292)
T ss_pred             CcCHHHH
Confidence            9999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.84  E-value=9.5e-22  Score=169.97  Aligned_cols=125  Identities=26%  Similarity=0.304  Sum_probs=93.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCcccc-----C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWM-----S   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~-----~   52 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.++.                        +..|+|||++.     .
T Consensus       113 ~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  189 (292)
T cd06644         113 QVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKD  189 (292)
T ss_pred             HHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCceeeccccccC
Confidence            5688999999999999   99999999999999985532                        56799999985     3


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++|||||||++|||++|..|+......       . .............       ..+......+.+++.+|++
T Consensus       190 ~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-------~-~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~  254 (292)
T cd06644         190 TPYDYKADIWSLGITLIEMAQIEPPHHELNPM-------R-VLLKIAKSEPPTL-------SQPSKWSMEFRDFLKTALD  254 (292)
T ss_pred             CCCCchhhhHhHHHHHHHHhcCCCCCccccHH-------H-HHHHHhcCCCccC-------CCCcccCHHHHHHHHHHhc
Confidence            45788999999999999999999998644321       1 1111111111110       1122334567889999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .+|++||++.++
T Consensus       255 ~~p~~Rp~~~~i  266 (292)
T cd06644         255 KHPETRPSAAQL  266 (292)
T ss_pred             CCcccCcCHHHH
Confidence            999999999988

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.84  E-value=4.2e-22  Score=172.97  Aligned_cols=140  Identities=14%  Similarity=0.191  Sum_probs=93.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ..++.|++.||+|||+   .+|+|+||||+||+++.++.                        ++.|+|||++.+. .++
T Consensus       107 ~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  183 (301)
T cd07873         107 KLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYS  183 (301)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCc
Confidence            4578999999999999   99999999999999986643                        5679999988754 578


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCch-------hHHHHHHh-hcCccchhhhhcccc----cchHHHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSG-------FKWVWKKL-EKGEFQDLIIVCGME----KNNKEKAERMA  124 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~  124 (291)
                      .++||||||+++|||++|+.||............       ....++.+ ..........+....    .........+.
T Consensus       184 ~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (301)
T cd07873         184 TQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGA  263 (301)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHH
Confidence            8999999999999999999998754321000000       00000000 000000000000000    00112245678


Q ss_pred             HHHHHccccCCCCCCCCCcc
Q 022858          125 LVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       125 ~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +++.+|++.||.+|||+.|+
T Consensus       264 ~li~~ml~~dp~~R~t~~ei  283 (301)
T cd07873         264 ELLSKLLQFEGRKRISAEEA  283 (301)
T ss_pred             HHHHHHhcCCcccCcCHHHH
Confidence            89999999999999999999

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.84  E-value=3.2e-22  Score=177.69  Aligned_cols=147  Identities=21%  Similarity=0.227  Sum_probs=99.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..++.|++.||+|||+   .+|+||||||+||+++.++.                       +..|+|||.+.+..++.+
T Consensus       121 ~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  197 (353)
T cd07850         121 SYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN  197 (353)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCc
Confidence            3578999999999999   99999999999999987643                       557999999998899999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCC-----------CchhHHHH----HHhhcC------ccchhhh----hcccc
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGF-----------PSGFKWVW----KKLEKG------EFQDLII----VCGME  113 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~-----------~~~~~~~~----~~~~~~------~~~~~~~----~~~~~  113 (291)
                      +|||||||++|+|++|+.||.........           ..+.....    ......      .+.+...    +....
T Consensus       198 ~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (353)
T cd07850         198 VDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSE  277 (353)
T ss_pred             hhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccc
Confidence            99999999999999999998644321000           00000000    000000      0000000    00000


Q ss_pred             cchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhh
Q 022858          114 KNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       114 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~  151 (291)
                      .........+.+++.+||+.||++||++.|++....+.
T Consensus       278 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~  315 (353)
T cd07850         278 SHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYIN  315 (353)
T ss_pred             cccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence            01122355678999999999999999999994344444

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.84  E-value=6.2e-22  Score=171.72  Aligned_cols=125  Identities=18%  Similarity=0.156  Sum_probs=95.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||.|||+   .+++||||||+||+++.++.                        ++.|+|||.+.+..++.
T Consensus       118 ~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  194 (297)
T cd06656         118 AAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP  194 (297)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCc
Confidence            4688999999999999   99999999999999986542                        56799999998888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|+||||+++|++++|..||..........       ... .....       ....+......+.+++.+|++.+|++
T Consensus       195 ~~Di~slGvil~~l~tg~~pf~~~~~~~~~~-------~~~-~~~~~-------~~~~~~~~~~~~~~li~~~l~~~p~~  259 (297)
T cd06656         195 KVDIWSLGIMAIEMVEGEPPYLNENPLRALY-------LIA-TNGTP-------ELQNPERLSAVFRDFLNRCLEMDVDR  259 (297)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCcchhee-------eec-cCCCC-------CCCCccccCHHHHHHHHHHccCChhh
Confidence            9999999999999999999996543221000       000 00000       00112233456788999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       260 Rps~~~i  266 (297)
T cd06656         260 RGSAKEL  266 (297)
T ss_pred             CcCHHHH
Confidence            9999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.84  E-value=1.4e-21  Score=163.93  Aligned_cols=118  Identities=25%  Similarity=0.311  Sum_probs=91.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCccccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      ..++.|++.||+|||+   .+++||||||+||+++.+..                     +..|+|||...+..++.++|
T Consensus        88 ~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  164 (237)
T cd05576          88 KRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACD  164 (237)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCCCCCCchhh
Confidence            4688999999999999   99999999999999987653                     45699999998888899999


Q ss_pred             eechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCC
Q 022858           61 VRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPS  140 (291)
Q Consensus        61 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs  140 (291)
                      |||+|+++||+++|..|+.......             ....  ..       ..+......+.+++.+|++.||++||+
T Consensus       165 vwslG~il~el~~g~~~~~~~~~~~-------------~~~~--~~-------~~~~~~~~~~~~li~~~l~~dp~~R~~  222 (237)
T cd05576         165 WWSLGAILFELLTGKTLVECHPSGI-------------NTHT--TL-------NIPEWVSEEARSLLQQLLQFNPTERLG  222 (237)
T ss_pred             HHHHHHHHHHHHHCcchhhcCchhc-------------cccc--cc-------CCcccCCHHHHHHHHHHccCCHHHhcC
Confidence            9999999999999998765332110             0000  00       011123356788999999999999999


Q ss_pred             CCcc
Q 022858          141 MTVR  144 (291)
Q Consensus       141 ~~~v  144 (291)
                      +.+.
T Consensus       223 ~~~~  226 (237)
T cd05576         223 AGVA  226 (237)
T ss_pred             CCcc
Confidence            8544

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.84  E-value=7.3e-22  Score=189.39  Aligned_cols=134  Identities=22%  Similarity=0.302  Sum_probs=98.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC------------------------------------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------------------------   39 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~------------------------------------------   39 (291)
                      ++|+.||+.||+|||+   .+|+||||||+|||++.++                                          
T Consensus       116 L~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~v  192 (932)
T PRK13184        116 LSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIV  192 (932)
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCC
Confidence            5688999999999999   9999999999999997532                                          


Q ss_pred             CCCccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHH
Q 022858           40 WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEK  119 (291)
Q Consensus        40 ~t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (291)
                      +|+.|||||++.+..++.++|||||||++|||+||..||.......    .   ...    ...   ..+.. .....+.
T Consensus       193 GT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k----i---~~~----~~i---~~P~~-~~p~~~i  257 (932)
T PRK13184        193 GTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK----I---SYR----DVI---LSPIE-VAPYREI  257 (932)
T ss_pred             CCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh----h---hhh----hhc---cChhh-ccccccC
Confidence            2678999999999899999999999999999999999986533210    0   000    000   00100 0011233


Q ss_pred             HHHHHHHHHHccccCCCCCCC-CCccchhhhhhcccc
Q 022858          120 AERMALVALWRVQYKPEAMPS-MTVRPAKFMLHGSLA  155 (291)
Q Consensus       120 ~~~~~~l~~~cl~~~p~~RPs-~~~v~~~~~L~~~~~  155 (291)
                      +..+.+++.+|++.||++||+ +.++  .+.|+....
T Consensus       258 P~~L~~LI~rcL~~DP~kR~ss~eeL--l~~Le~~lq  292 (932)
T PRK13184        258 PPFLSQIAMKALAVDPAERYSSVQEL--KQDLEPHLQ  292 (932)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHH--HHHHHHHHh
Confidence            466788999999999999975 4556  666666544

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.84  E-value=4.5e-22  Score=178.14  Aligned_cols=132  Identities=17%  Similarity=0.188  Sum_probs=110.3

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCC
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++.++.||+.||+||..   +++|||||..+|.|+.++..                         .+.|.|||.+....+
T Consensus       367 LlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtF  443 (1157)
T KOG4278|consen  367 LLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTF  443 (1157)
T ss_pred             HHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCccccccccc
Confidence            36789999999999999   99999999999999998754                         678999999999999


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.|+|||+|||+|||+.| |-.||.+-..        ..++         +++........+..|+.++.+||+.||+..
T Consensus       444 SiKSDVWAFGVLLWEIATYGMsPYPGidl--------SqVY---------~LLEkgyRM~~PeGCPpkVYeLMraCW~Ws  506 (1157)
T KOG4278|consen  444 SIKSDVWAFGVLLWEIATYGMSPYPGIDL--------SQVY---------GLLEKGYRMDGPEGCPPKVYELMRACWNWS  506 (1157)
T ss_pred             ccchhhHHHHHHHHHHHhcCCCCCCCccH--------HHHH---------HHHhccccccCCCCCCHHHHHHHHHHhcCC
Confidence            999999999999999985 8788765432        2233         334444445556778899999999999999


Q ss_pred             CCCCCCCCccchhhhhhccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~  154 (291)
                      |.+||+++|+  .+.++...
T Consensus       507 PsDRPsFaei--HqafEtmf  524 (1157)
T KOG4278|consen  507 PSDRPSFAEI--HQAFETMF  524 (1157)
T ss_pred             cccCccHHHH--HHHHHHHh
Confidence            9999999999  88877653

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.84  E-value=6.2e-22  Score=176.91  Aligned_cols=125  Identities=20%  Similarity=0.244  Sum_probs=92.7

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCC----
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSF----   53 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~----   53 (291)
                      .++.|++.||+|||+   ++|+||||||+|||++.++.                         ++.|+|||++.+.    
T Consensus       146 ~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  222 (370)
T cd05596         146 FYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDG  222 (370)
T ss_pred             HHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCC
Confidence            577899999999999   99999999999999986543                         6789999998653    


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      .++.++|||||||++|||++|+.||......       . ....+..... .+     ..+........+.+++..|++.
T Consensus       223 ~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-------~-~~~~i~~~~~-~~-----~~~~~~~~s~~~~~li~~~L~~  288 (370)
T cd05596         223 YYGRECDWWSVGVFLYEMLVGDTPFYADSLV-------G-TYSKIMDHKN-SL-----TFPDDIEISKQAKDLICAFLTD  288 (370)
T ss_pred             CCCCceeeeehhHHHHHHHhCCCCcCCCCHH-------H-HHHHHHcCCC-cC-----CCCCcCCCCHHHHHHHHHHccC
Confidence            4788999999999999999999999754321       1 1111111100 00     0011112346778889999999


Q ss_pred             CCCC--CCCCCcc
Q 022858          134 KPEA--MPSMTVR  144 (291)
Q Consensus       134 ~p~~--RPs~~~v  144 (291)
                      +|++  ||++.++
T Consensus       289 ~p~r~~R~s~~el  301 (370)
T cd05596         289 REVRLGRNGVDEI  301 (370)
T ss_pred             hhhccCCCCHHHH
Confidence            9987  9999888

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=8.1e-22  Score=172.68  Aligned_cols=135  Identities=16%  Similarity=0.173  Sum_probs=98.7

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCC-CCc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      .+++|++.||+|||+   ++|+|||||.+|||||.++.                         |.+|.|||.+.+. .|+
T Consensus       222 c~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg  298 (560)
T KOG0600|consen  222 CYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYG  298 (560)
T ss_pred             HHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccc
Confidence            478899999999999   99999999999999998765                         8899999999985 799


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHh--------hcCccc--hhhhh-----cccccchHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKL--------EKGEFQ--DLIIV-----CGMEKNNKEKAE  121 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~--~~~~~-----~~~~~~~~~~~~  121 (291)
                      ..+|+||.||||.||++|++.+.+....+.    +.-+.+..        ....+.  ....+     +...+.......
T Consensus       299 ~aVDlWS~GCIl~El~~gkPI~~G~tEveQ----l~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~  374 (560)
T KOG0600|consen  299 TAVDLWSVGCILAELFLGKPILQGRTEVEQ----LHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPA  374 (560)
T ss_pred             cceeehhhhHHHHHHHcCCCCcCCccHHHH----HHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCH
Confidence            999999999999999999999877654311    11111111        100111  00000     001111233356


Q ss_pred             HHHHHHHHccccCCCCCCCCCcc
Q 022858          122 RMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       122 ~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ..++|+...|..||++|.|+.++
T Consensus       375 ~~l~Ll~~lL~ldP~kR~tA~~a  397 (560)
T KOG0600|consen  375 SALDLLEKLLSLDPDKRGTASSA  397 (560)
T ss_pred             HHHHHHHHHhccCccccccHHHH
Confidence            67888999999999999999887

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.84  E-value=6e-22  Score=167.65  Aligned_cols=123  Identities=24%  Similarity=0.338  Sum_probs=95.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||.|||+   .+++|+||||+||+++.+..                         ++.|+|||+..+..++
T Consensus       104 ~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~  180 (257)
T cd08225         104 LSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYN  180 (257)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcCCCCC
Confidence            5688999999999999   99999999999999986532                         4569999998888899


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++|+||||+++||+++|..|+.....       ........ .+...         .........+.+++.+|++.+|+
T Consensus       181 ~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~-~~~~~---------~~~~~~~~~~~~~i~~~l~~~p~  243 (257)
T cd08225         181 NKTDIWSLGCVLYELCTLKHPFEGNNL-------HQLVLKIC-QGYFA---------PISPNFSRDLRSLISQLFKVSPR  243 (257)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCccH-------HHHHHHHh-cccCC---------CCCCCCCHHHHHHHHHHhccChh
Confidence            999999999999999999999854321       12222111 11111         11122345788999999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +||++.++
T Consensus       244 ~Rpt~~~l  251 (257)
T cd08225         244 DRPSITSI  251 (257)
T ss_pred             hCcCHHHH
Confidence            99999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.84  E-value=2.2e-21  Score=166.99  Aligned_cols=135  Identities=21%  Similarity=0.190  Sum_probs=99.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      ..++.+++.||.|||+.  ++++||||||+||+++.+..                      +..|+|||++.+..++.++
T Consensus       106 ~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~  183 (284)
T cd06620         106 GKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKS  183 (284)
T ss_pred             HHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCccc
Confidence            46789999999999972  58999999999999986542                      6689999999888899999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCC----CCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSG----FPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      |||||||++||+++|..||........    ...+.+........ .        .........+..+.+++.+|++.||
T Consensus       184 Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~li~~~l~~dp  254 (284)
T cd06620         184 DVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE-P--------PPRLPSSDFPEDLRDFVDACLLKDP  254 (284)
T ss_pred             hHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc-c--------CCCCCchhcCHHHHHHHHHHhcCCc
Confidence            999999999999999999976543211    11111111111110 0        0001112245678899999999999


Q ss_pred             CCCCCCCccchhhh
Q 022858          136 EAMPSMTVRPAKFM  149 (291)
Q Consensus       136 ~~RPs~~~v~~~~~  149 (291)
                      ++||++.|+  +..
T Consensus       255 ~~Rpt~~e~--~~~  266 (284)
T cd06620         255 TERPTPQQL--CAM  266 (284)
T ss_pred             ccCcCHHHH--hcC
Confidence            999999999  654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=2.1e-21  Score=174.19  Aligned_cols=124  Identities=24%  Similarity=0.256  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCcccc-----CCC
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWM-----SFP   54 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~-----~~~   54 (291)
                      ++.|++.||.|||+   .+|||||||..|||++-++.                        ||+|||||++.     +.+
T Consensus       135 vc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~P  211 (1187)
T KOG0579|consen  135 VCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQP  211 (1187)
T ss_pred             HHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCC
Confidence            67899999999999   99999999999999986643                        99999999876     458


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      |+.++|||||||+|.||..+.+|.....+.       . +.-.+....-+-       .-.+..-...+.++..+|+..|
T Consensus       212 YDykaDiWSlGITLIEMAqiEPPHhelnpM-------R-VllKiaKSePPT-------LlqPS~Ws~~F~DfLk~cL~Kn  276 (1187)
T KOG0579|consen  212 YDYKADIWSLGITLIEMAQIEPPHHELNPM-------R-VLLKIAKSEPPT-------LLQPSHWSRSFSDFLKRCLVKN  276 (1187)
T ss_pred             chhhhhHHhhhhHHHHHhccCCCccccchH-------H-HHHHHhhcCCCc-------ccCcchhhhHHHHHHHHHHhcC
Confidence            999999999999999999999997655432       1 111111111111       1123445677888999999999


Q ss_pred             CCCCCCCCccc
Q 022858          135 PEAMPSMTVRP  145 (291)
Q Consensus       135 p~~RPs~~~v~  145 (291)
                      |+.||+++++.
T Consensus       277 p~~Rp~aaqll  287 (1187)
T KOG0579|consen  277 PRNRPPAAQLL  287 (1187)
T ss_pred             CccCCCHHHHh
Confidence            99999999883

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.84  E-value=2.2e-22  Score=179.97  Aligned_cols=138  Identities=26%  Similarity=0.205  Sum_probs=109.3

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCc
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +++++.++|.||+|||+   +++|||||-.+|+|++.+..                        ...|+|||.+....++
T Consensus       264 k~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s  340 (474)
T KOG0194|consen  264 KLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFS  340 (474)
T ss_pred             HHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccc
Confidence            36789999999999999   99999999999999987432                        5789999999999999


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++|||||||++||+++ |..||.+....        .+...+....        ...+.+...+..+..++..||..+|
T Consensus       341 ~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--------~v~~kI~~~~--------~r~~~~~~~p~~~~~~~~~c~~~~p  404 (474)
T KOG0194|consen  341 FKTDVWSFGVLLWEIFENGAEPYPGMKNY--------EVKAKIVKNG--------YRMPIPSKTPKELAKVMKQCWKKDP  404 (474)
T ss_pred             cccchhheeeeEEeeeccCCCCCCCCCHH--------HHHHHHHhcC--------ccCCCCCCCHHHHHHHHHHhccCCh
Confidence            99999999999999997 78888766532        2223331111        1112223456777888889999999


Q ss_pred             CCCCCCCccchhhhhhcccccccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLASMLN  159 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~~~~~  159 (291)
                      ++||+|.++  .+.|+.+......
T Consensus       405 ~~R~tm~~i--~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  405 EDRPTMSTI--KKKLEALEKKKEA  426 (474)
T ss_pred             hhccCHHHH--HHHHHHHHhcccc
Confidence            999999999  9998888765443

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.84  E-value=6.2e-22  Score=171.14  Aligned_cols=140  Identities=20%  Similarity=0.243  Sum_probs=94.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.++.                        ++.|+|||.+.+. .++
T Consensus       109 ~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  185 (293)
T cd07843         109 KCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYS  185 (293)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccccCchhhcCCcccc
Confidence            5789999999999999   99999999999999997643                        5569999988764 468


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhH-------HHHHHhhc------CccchhhhhcccccchHH-HHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFK-------WVWKKLEK------GEFQDLIIVCGMEKNNKE-KAER  122 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~-------~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~  122 (291)
                      .++|+||||+++|||++|..||...........+..       ..+..+..      .................. ....
T Consensus       186 ~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (293)
T cd07843         186 TAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDN  265 (293)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChH
Confidence            899999999999999999999865432110000000       00000000      000000000000011111 2466


Q ss_pred             HHHHHHHccccCCCCCCCCCcc
Q 022858          123 MALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       123 ~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +.+++.+|++.+|++||++.|+
T Consensus       266 ~~~li~~~l~~~p~~R~t~~el  287 (293)
T cd07843         266 GFDLLNRLLTYDPAKRISAEDA  287 (293)
T ss_pred             HHHHHHHHhccCccccCCHHHH
Confidence            7889999999999999999988

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.84  E-value=9.2e-22  Score=185.40  Aligned_cols=132  Identities=20%  Similarity=0.228  Sum_probs=106.9

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCC
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSF   53 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~   53 (291)
                      +++++.|||.|++||++   .++|||||-.+|||++.+..                           ...|||||.+...
T Consensus       420 Llsfa~QIa~GMe~L~~---~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~  496 (609)
T KOG0200|consen  420 LLSFAYQIANGMEYLAS---VPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDR  496 (609)
T ss_pred             HHHHHHHHHHHHHHHhh---CCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccC
Confidence            36899999999999999   99999999999999987632                           3459999999999


Q ss_pred             CCccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           54 PVTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      .|+.++|||||||+|||++| |..|+.+...       ...+.+.+++|         .....+..|..++.++|..||+
T Consensus       497 ~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~-------~~~l~~~l~~G---------~r~~~P~~c~~eiY~iM~~CW~  560 (609)
T KOG0200|consen  497 VFTSKSDVWSFGILLWEIFTLGGTPYPGIPP-------TEELLEFLKEG---------NRMEQPEHCSDEIYDLMKSCWN  560 (609)
T ss_pred             cccccchhhHHHHHHHHHhhCCCCCCCCCCc-------HHHHHHHHhcC---------CCCCCCCCCCHHHHHHHHHHhC
Confidence            99999999999999999996 7778754211       11123333333         3334556678899999999999


Q ss_pred             cCCCCCCCCCccchhhhhhcc
Q 022858          133 YKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       133 ~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      .+|++||++.++  ...++..
T Consensus       561 ~~p~~RP~F~~~--~~~~~~~  579 (609)
T KOG0200|consen  561 ADPEDRPTFSEC--VEFFEKH  579 (609)
T ss_pred             CCcccCCCHHHH--HHHHHHH
Confidence            999999999999  8888774

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.84  E-value=3.2e-21  Score=166.35  Aligned_cols=134  Identities=25%  Similarity=0.225  Sum_probs=97.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      ..|+.|++.||+|||+   .+++|+||+|+||+++.+..                      +..|++||.+.+..++.++
T Consensus       108 ~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~  184 (287)
T cd06621         108 GKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITS  184 (287)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeeccccccccccccccccCCccccCHHHhcCCCCCchh
Confidence            4689999999999999   99999999999999986542                      5679999999888999999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      ||||+|+++|||++|..|+.......  ....+ ............+.+.   ..........+.+++.+|++.+|.+||
T Consensus       185 Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp  258 (287)
T cd06621         185 DVWSLGLTLLEVAQNRFPFPPEGEPP--LGPIE-LLSYIVNMPNPELKDE---PGNGIKWSEEFKDFIKQCLEKDPTRRP  258 (287)
T ss_pred             hHHHHHHHHHHHHhCCCCCCcccCCC--CChHH-HHHHHhcCCchhhccC---CCCCCchHHHHHHHHHHHcCCCcccCC
Confidence            99999999999999999987553210  01111 1111111111111000   010112346788999999999999999


Q ss_pred             CCCcc
Q 022858          140 SMTVR  144 (291)
Q Consensus       140 s~~~v  144 (291)
                      ++.|+
T Consensus       259 t~~ei  263 (287)
T cd06621         259 TPWDM  263 (287)
T ss_pred             CHHHH
Confidence            99999

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.84  E-value=9e-22  Score=162.14  Aligned_cols=114  Identities=25%  Similarity=0.247  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCcccccee
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDVR   62 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~Dv~   62 (291)
                      ++.||+.||+|||+   +.|++|||||+|||||.++.                     ||-|+|||.+.+..++.++|-|
T Consensus       149 YAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWW  225 (355)
T KOG0616|consen  149 YAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWW  225 (355)
T ss_pred             HHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCcchhHH
Confidence            67899999999999   99999999999999998864                     9999999999999999999999


Q ss_pred             chhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           63 SFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        63 s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      ||||++|||+.|.+||....+.        .++..+..+.+          ..+......+.+|+...++.|-.+|
T Consensus       226 alGVLIYEMlaG~pPF~~~~~~--------~iY~KI~~~~v----------~fP~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  226 ALGVLIYEMLAGYPPFYDDNPI--------QIYEKILEGKV----------KFPSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             HHHHHHHHHHcCCCCCcCCChH--------HHHHHHHhCcc----------cCCcccCHHHHHHHHHHHhhhhHhh
Confidence            9999999999999999877642        23444444322          1122233455666777778887777

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.84  E-value=1.2e-21  Score=168.60  Aligned_cols=125  Identities=21%  Similarity=0.196  Sum_probs=92.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-----
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-----   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-----   52 (291)
                      ..++.|++.||.|||+   .+++||||||+||+++.++.                        ++.|+|||.+..     
T Consensus       127 ~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  203 (286)
T cd06638         127 AYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLD  203 (286)
T ss_pred             HHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhcc
Confidence            3578999999999999   99999999999999986543                        567999998753     


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++||||+||++|||++|+.|+......       .... ...........+       +......+.+++.+|++
T Consensus       204 ~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~-------~~~~-~~~~~~~~~~~~-------~~~~~~~~~~li~~~l~  268 (286)
T cd06638         204 STYDARCDVWSLGITAIELGDGDPPLADLHPM-------RALF-KIPRNPPPTLHQ-------PELWSNEFNDFIRKCLT  268 (286)
T ss_pred             ccccchhhhhhHHHHHHHHhcCCCCCCCCchh-------HHHh-hccccCCCcccC-------CCCcCHHHHHHHHHHcc
Confidence            45788999999999999999999998654321       0000 011110001101       11123568899999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .+|++||++.++
T Consensus       269 ~~p~~Rps~~el  280 (286)
T cd06638         269 KDYEKRPTVSDL  280 (286)
T ss_pred             CCcccCCCHHHH
Confidence            999999999998

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.84  E-value=4.4e-22  Score=171.18  Aligned_cols=140  Identities=20%  Similarity=0.156  Sum_probs=94.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.++.                        +..|+|||.+.+ ..++
T Consensus       103 ~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  179 (286)
T cd07847         103 KKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYG  179 (286)
T ss_pred             HHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcC
Confidence            5789999999999999   99999999999999986543                        457999999876 4678


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHH-------HHHhhcCcc-chhhhhcccccc-----hHHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWV-------WKKLEKGEF-QDLIIVCGMEKN-----NKEKAERM  123 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~  123 (291)
                      .++||||||+++|||++|..||......+.........       ......... .....+......     .......+
T Consensus       180 ~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (286)
T cd07847         180 PPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPA  259 (286)
T ss_pred             chhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHH
Confidence            89999999999999999999986543211000000000       000000000 000000000000     11224678


Q ss_pred             HHHHHHccccCCCCCCCCCcc
Q 022858          124 ALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       124 ~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .+++.+|++.+|++||++.|+
T Consensus       260 ~~li~~~l~~~p~~Rp~~~ei  280 (286)
T cd07847         260 LSFLKGCLQMDPTERLSCEEL  280 (286)
T ss_pred             HHHHHHHhcCCccccCCHHHH
Confidence            899999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.84  E-value=2.3e-21  Score=166.67  Aligned_cols=136  Identities=19%  Similarity=0.224  Sum_probs=96.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.++.|++.||.|||+   .+++|+||+|+||+++.++.                       +..|+|||.+.+..++.+
T Consensus       110 ~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~  186 (287)
T cd07838         110 KDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATP  186 (287)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCc
Confidence            5688999999999999   99999999999999997653                       456999999998889999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc-Cc--c-------chhhhh---cccccchHHHHHHHHH
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK-GE--F-------QDLIIV---CGMEKNNKEKAERMAL  125 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~--~-------~~~~~~---~~~~~~~~~~~~~~~~  125 (291)
                      +|+||||+++|||++|.+||.......    ....+...... ..  .       ......   .............+.+
T Consensus       187 ~Di~s~G~~l~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (287)
T cd07838         187 VDMWSVGCIFAELFRRRPLFRGTSEAD----QLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLD  262 (287)
T ss_pred             chhhhHHHHHHHHHhCCCcccCCChHH----HHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHH
Confidence            999999999999999999886543211    00001000000 00  0       000000   0001111233467788


Q ss_pred             HHHHccccCCCCCCCCCcc
Q 022858          126 VALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v  144 (291)
                      ++.+||+.||++||++.++
T Consensus       263 li~~~l~~dp~~Rp~~~~i  281 (287)
T cd07838         263 LLKKMLTFNPHKRISAFEA  281 (287)
T ss_pred             HHHHHhccCCccCCCHHHH
Confidence            9999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.84  E-value=8.1e-22  Score=171.01  Aligned_cols=125  Identities=20%  Similarity=0.269  Sum_probs=95.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.++.                        +..|+|||++.+..++.
T Consensus       120 ~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  196 (297)
T cd06659         120 ATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGT  196 (297)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCc
Confidence            5688999999999999   99999999999999986643                        56799999998888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|+.||......       ... ..+.......       ..........+.+++.+|++.+|++
T Consensus       197 ~~Dv~slG~il~el~~g~~p~~~~~~~-------~~~-~~~~~~~~~~-------~~~~~~~~~~l~~~i~~~l~~~P~~  261 (297)
T cd06659         197 EVDIWSLGIMVIEMVDGEPPYFSDSPV-------QAM-KRLRDSPPPK-------LKNAHKISPVLRDFLERMLTREPQE  261 (297)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHH-HHHhccCCCC-------ccccCCCCHHHHHHHHHHhcCCccc
Confidence            999999999999999999998643321       101 1111110000       0011122356788999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       262 Rps~~~l  268 (297)
T cd06659         262 RATAQEL  268 (297)
T ss_pred             CcCHHHH
Confidence            9999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.84  E-value=6e-22  Score=170.53  Aligned_cols=136  Identities=19%  Similarity=0.170  Sum_probs=95.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCC-CC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSF-PV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~-~~   55 (291)
                      ..++.|++.||+|||+   .+++|+||+|+||+++.++.                         +..|+|||++.+. .+
T Consensus       103 ~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~  179 (288)
T cd07833         103 RSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNY  179 (288)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCc
Confidence            4678999999999999   99999999999999986543                         4569999999887 78


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHh-----------h-cC-----ccchhhhhccc-ccchH
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKL-----------E-KG-----EFQDLIIVCGM-EKNNK  117 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-----------~-~~-----~~~~~~~~~~~-~~~~~  117 (291)
                      +.++||||||+++|+|++|..|+.......    .........           . ..     ...+..++... ...+.
T Consensus       180 ~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (288)
T cd07833         180 GKPVDVWAIGCIMAELLDGEPLFPGDSDID----QLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPG  255 (288)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCC
Confidence            899999999999999999999886442210    000000000           0 00     00000000000 01112


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          118 EKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       118 ~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .....+.+++.+||+.+|++||++.++
T Consensus       256 ~~~~~~~~li~~~l~~~p~~Rps~~~i  282 (288)
T cd07833         256 KVSSPALDFLKACLRMDPKERLTCDEL  282 (288)
T ss_pred             ccchHHHHHHHHHhccCchhcccHHHH
Confidence            235778999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.84  E-value=8.6e-22  Score=175.11  Aligned_cols=137  Identities=18%  Similarity=0.167  Sum_probs=109.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++|+.|||.||+||.+   .++|||||.++|+|+|.++.                          .+.|||||.+.-+++
T Consensus       640 vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkF  716 (807)
T KOG1094|consen  640 VSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKF  716 (807)
T ss_pred             HHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccc
Confidence            5799999999999999   99999999999999998875                          678999999999999


Q ss_pred             ccccceechhHHHHHHh--hCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           56 THKCDVRSFGMLLFEIL--GRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ell--tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      +++||||+||+++||++  +...||......+    ..+..........      .......+.-|+..+.++++.||..
T Consensus       717 ttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~----vven~~~~~~~~~------~~~~l~~P~~cp~~lyelml~Cw~~  786 (807)
T KOG1094|consen  717 TTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ----VVENAGEFFRDQG------RQVVLSRPPACPQGLYELMLRCWRR  786 (807)
T ss_pred             cchhhhhhhHHHHHHHHHHHhhCchhhhhHHH----HHHhhhhhcCCCC------cceeccCCCcCcHHHHHHHHHHhch
Confidence            99999999999999977  6778887665431    1111111111111      1122345667889999999999999


Q ss_pred             CCCCCCCCCccchhhhhhcc
Q 022858          134 KPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~  153 (291)
                      +..+||++.++  +..|++.
T Consensus       787 es~~RPsFe~l--h~~lq~~  804 (807)
T KOG1094|consen  787 ESEQRPSFEQL--HLFLQED  804 (807)
T ss_pred             hhhcCCCHHHH--HHHHHHh
Confidence            99999999999  8777654

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=1.3e-21  Score=167.08  Aligned_cols=125  Identities=22%  Similarity=0.237  Sum_probs=93.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-----
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-----   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-----   52 (291)
                      ..++.|++.||+|||+   .+++|+||+|+||+++.++.                        +..|+|||++..     
T Consensus       116 ~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  192 (275)
T cd06608         116 AYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPD  192 (275)
T ss_pred             HHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhccccccc
Confidence            3588999999999999   99999999999999986642                        557999998753     


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++||||||+++|++++|..||......       ....+ ........       ..........+.+++.+|+.
T Consensus       193 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~-~~~~~~~~-------~~~~~~~~~~~~~li~~~l~  257 (275)
T cd06608         193 ASYDARSDVWSLGITAIELADGKPPLCDMHPM-------RALFK-IPRNPPPT-------LKSPENWSKKFNDFISECLI  257 (275)
T ss_pred             CCccccccHHHhHHHHHHHHhCCCCccccchH-------HHHHH-hhccCCCC-------CCchhhcCHHHHHHHHHHhh
Confidence            34678899999999999999999998643211       11111 11111111       11122245678899999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .||++|||+.++
T Consensus       258 ~dp~~Rpt~~~l  269 (275)
T cd06608         258 KNYEQRPFMEEL  269 (275)
T ss_pred             cChhhCcCHHHH
Confidence            999999999988

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.84  E-value=1.9e-21  Score=167.47  Aligned_cols=125  Identities=22%  Similarity=0.235  Sum_probs=96.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||+|||+   .+++|+||+|+||+++.++.                        +..|++||.+.+..++.
T Consensus       119 ~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  195 (286)
T cd06614         119 AYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGP  195 (286)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCC
Confidence            5689999999999999   99999999999999986543                        45799999998888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|+||||+++|+|++|..|+......       ..... ........       ..........+.+++.+|++.+|.+
T Consensus       196 ~~Dv~slGvil~~l~~g~~p~~~~~~~-------~~~~~-~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~  260 (286)
T cd06614         196 KVDIWSLGIMCIEMAEGEPPYLREPPL-------RALFL-ITTKGIPP-------LKNPEKWSPEFKDFLNKCLVKDPEK  260 (286)
T ss_pred             ccccHHHHHHHHHHHhCCCCCCCCCHH-------HHHHH-HHhcCCCC-------CcchhhCCHHHHHHHHHHhccChhh
Confidence            999999999999999999998644321       11111 11111111       0111224467889999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       261 Rpt~~~i  267 (286)
T cd06614         261 RPSAEEL  267 (286)
T ss_pred             CcCHHHH
Confidence            9999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.84  E-value=5.1e-21  Score=172.67  Aligned_cols=78  Identities=29%  Similarity=0.424  Sum_probs=70.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..|+.||+.||.+||+   .+|||+||||+||||.....                       +..|.|||++.+.+|+.+
T Consensus       292 r~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~  368 (586)
T KOG0667|consen  292 RKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTA  368 (586)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCc
Confidence            4689999999999999   99999999999999975432                       778999999999999999


Q ss_pred             cceechhHHHHHHhhCCCcccccc
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                      .||||||||+.||++|.+.|.+..
T Consensus       369 IDmWSLGCIlAEL~tG~PLfpG~n  392 (586)
T KOG0667|consen  369 IDMWSLGCILAELFTGEPLFPGDN  392 (586)
T ss_pred             cceeehhhhHHhHhcCccccCCCC
Confidence            999999999999999998887654

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.84  E-value=4.4e-21  Score=163.84  Aligned_cols=126  Identities=19%  Similarity=0.133  Sum_probs=96.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-C--------------------CCccccCccccCCCCccccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-W--------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-~--------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      ..++.|++.||.|||+   .+++||||||+||+++.+. .                    +..|+|||++.+..++.++|
T Consensus       112 ~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  188 (267)
T PHA03390        112 KKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFD  188 (267)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCCCcccChhhhcCCCCCchhh
Confidence            4688999999999999   9999999999999998776 2                    67899999999888999999


Q ss_pred             eechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCC
Q 022858           61 VRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPS  140 (291)
Q Consensus        61 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs  140 (291)
                      |||||+++|||++|..||......  ......+... . ..          ...........+.+++.+|++.+|.+||+
T Consensus       189 vwslG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~-~-~~----------~~~~~~~~~~~~~~li~~~l~~~p~~R~~  254 (267)
T PHA03390        189 WWAVGVLTYELLTGKHPFKEDEDE--ELDLESLLKR-Q-QK----------KLPFIKNVSKNANDFVQSMLKYNINYRLT  254 (267)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCcc--hhhHHHHHHh-h-cc----------cCCcccccCHHHHHHHHHHhccChhhCCc
Confidence            999999999999999999744321  1111111111 1 00          00111234567889999999999999996


Q ss_pred             -CCcc
Q 022858          141 -MTVR  144 (291)
Q Consensus       141 -~~~v  144 (291)
                       +.++
T Consensus       255 ~~~~~  259 (267)
T PHA03390        255 NYNEI  259 (267)
T ss_pred             hHHHH
Confidence             5777

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.84  E-value=7.2e-22  Score=169.84  Aligned_cols=135  Identities=19%  Similarity=0.285  Sum_probs=92.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCC-Cc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFP-VT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~-~~   56 (291)
                      +.++.|++.||+|||+   .+++|+||+|+||+++.++.                        ++.|+|||++.+.. ++
T Consensus       103 ~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  179 (284)
T cd07860         103 KSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS  179 (284)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCC
Confidence            4678999999999999   99999999999999987653                        45699999887644 68


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC----------------ccchhhhhcccccchHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG----------------EFQDLIIVCGMEKNNKEKA  120 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~  120 (291)
                      .++||||||+++|||+||+.||........   ... ........                .+...... ..........
T Consensus       180 ~~~Dv~slG~il~~l~tg~~p~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  254 (284)
T cd07860         180 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQ---LFR-IFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQ-DFSKVVPPLD  254 (284)
T ss_pred             cHHHHHHHHHHHHHHHHCCCCCCCCCHHHH---HHH-HHHHhCCCChhhhhhhhHHHHHHhhccccccc-CHHHHcccCC
Confidence            889999999999999999999864432100   000 00000000                00000000 0000011223


Q ss_pred             HHHHHHHHHccccCCCCCCCCCcc
Q 022858          121 ERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       121 ~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ..+.+++.+|++.||++||++.++
T Consensus       255 ~~~~~li~~~l~~~P~~Rpt~~~~  278 (284)
T cd07860         255 EDGRDLLSQMLHYDPNKRISAKAA  278 (284)
T ss_pred             HHHHHHHHHhcCCCcccCCCHHHH
Confidence            567789999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.84  E-value=1.1e-21  Score=168.65  Aligned_cols=125  Identities=19%  Similarity=0.165  Sum_probs=93.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccC-CCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMS-FPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~-~~~~~~   58 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.++.                      +..|+|||.+.. ..++.+
T Consensus       100 ~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  176 (279)
T cd05633         100 RFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSS  176 (279)
T ss_pred             HHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCch
Confidence            4688999999999999   99999999999999986532                      678999998864 568899


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|||||||++|||++|..||.......     ..........          .....+......+.+++.+|++.||++|
T Consensus       177 ~Di~slG~~l~~l~~g~~pf~~~~~~~-----~~~~~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~R  241 (279)
T cd05633         177 ADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHEIDRMTLT----------VNVELPDSFSPELKSLLEGLLQRDVSKR  241 (279)
T ss_pred             hhhHHHHHHHHHHHhCCCCcCCCCCcC-----HHHHHHHhhc----------CCcCCccccCHHHHHHHHHHhcCCHHHh
Confidence            999999999999999999986543210     0111111100          0011122344678889999999999999


Q ss_pred             CC-----CCcc
Q 022858          139 PS-----MTVR  144 (291)
Q Consensus       139 Ps-----~~~v  144 (291)
                      |+     +.++
T Consensus       242 ~~~~~~~~~~~  252 (279)
T cd05633         242 LGCLGRGAQEV  252 (279)
T ss_pred             cCCCCCCHHHH
Confidence            95     5555

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.84  E-value=2.3e-21  Score=169.71  Aligned_cols=128  Identities=24%  Similarity=0.263  Sum_probs=95.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------CCccccCcccc---CCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------TPGYAAPETWM---SFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------t~~y~aPE~~~---~~~~~~~   58 (291)
                      ..++.|++.||.|||+   .+++||||+|+||+++.++.                    ++.|+|||++.   .+.++.+
T Consensus       128 ~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  204 (317)
T cd06635         128 AAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEGQYDGK  204 (317)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCccccChhhhhcCCCCCCCcc
Confidence            4578999999999999   99999999999999986543                    56799999974   3568899


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +||||||+++|||++|..||......       .... .+......        ..........+.+++.+|++.+|.+|
T Consensus       205 ~Dv~slGvil~el~~g~~p~~~~~~~-------~~~~-~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~R  268 (317)
T cd06635         205 VDVWSLGITCIELAERKPPLFNMNAM-------SALY-HIAQNESP--------TLQSNEWSDYFRNFVDSCLQKIPQDR  268 (317)
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCccHH-------HHHH-HHHhccCC--------CCCCccccHHHHHHHHHHccCCcccC
Confidence            99999999999999999998643211       1111 11111110        01112234568899999999999999


Q ss_pred             CCCCccchhhhh
Q 022858          139 PSMTVRPAKFML  150 (291)
Q Consensus       139 Ps~~~v~~~~~L  150 (291)
                      |++.++  +..+
T Consensus       269 pt~~~i--l~~~  278 (317)
T cd06635         269 PTSEEL--LKHM  278 (317)
T ss_pred             cCHHHH--HhCh
Confidence            999999  6543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=2.7e-21  Score=164.19  Aligned_cols=126  Identities=23%  Similarity=0.238  Sum_probs=95.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------CCccccCccccCCCCccccce
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------TPGYAAPETWMSFPVTHKCDV   61 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------t~~y~aPE~~~~~~~~~~~Dv   61 (291)
                      ..++.|++.||.|||+   .+++|+||+|+||+++.++.                    +..|++||.+.+..++.++||
T Consensus       100 ~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv  176 (260)
T cd05611         100 KQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMSDW  176 (260)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCccChhhhcCCCCcchhhh
Confidence            4688999999999999   99999999999999986542                    568999999988888999999


Q ss_pred             echhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCCC
Q 022858           62 RSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSM  141 (291)
Q Consensus        62 ~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~  141 (291)
                      ||||+++||+++|..||......        ........+...      ........+...+.+++.+|++.+|++||++
T Consensus       177 ~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~  242 (260)
T cd05611         177 WSLGCVIFEFLFGYPPFHAETPD--------AVFDNILSRRIN------WPEEVKEFCSPEAVDLINRLLCMDPAKRLGA  242 (260)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhcccC------CCCcccccCCHHHHHHHHHHccCCHHHccCC
Confidence            99999999999999998644321        111111111110      0001111345778999999999999999998


Q ss_pred             Ccc
Q 022858          142 TVR  144 (291)
Q Consensus       142 ~~v  144 (291)
                      .++
T Consensus       243 ~~~  245 (260)
T cd05611         243 NGY  245 (260)
T ss_pred             CcH
Confidence            766

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.83  E-value=1.8e-21  Score=167.03  Aligned_cols=135  Identities=20%  Similarity=0.195  Sum_probs=94.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccC-CCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMS-FPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~-~~~~~   57 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++. +.                       +..|+|||.+.. ..++.
T Consensus       103 ~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  178 (282)
T cd07831         103 KSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGP  178 (282)
T ss_pred             HHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCc
Confidence            5688999999999999   99999999999999987 32                       557999997654 45788


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHH-----------HhhcCccchhhhhccc----ccchHHHHHH
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWK-----------KLEKGEFQDLIIVCGM----EKNNKEKAER  122 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~----~~~~~~~~~~  122 (291)
                      ++|||||||++|||++|..||.......    ...+...           ............+...    .......+..
T Consensus       179 ~~Di~slGv~l~el~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (282)
T cd07831         179 KMDIWAVGCVFFEILSLFPLFPGTNELD----QIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAE  254 (282)
T ss_pred             chhHHHHHHHHHHHHcCCcCCCCCCHHH----HHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHH
Confidence            9999999999999999999996543211    1111111           1100000000000000    0011234678


Q ss_pred             HHHHHHHccccCCCCCCCCCcc
Q 022858          123 MALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       123 ~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +.+++.+|++.+|++||++.++
T Consensus       255 ~~~li~~~l~~~P~~R~~~~~~  276 (282)
T cd07831         255 GLDLLKKLLAYDPDERITAKQA  276 (282)
T ss_pred             HHHHHHHHhccCcccccCHHHH
Confidence            8999999999999999999988

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.83  E-value=1.1e-21  Score=170.03  Aligned_cols=136  Identities=18%  Similarity=0.194  Sum_probs=94.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      +.++.||++||.|||+   ++++|+||||+||+++.++.                        ++.|+|||.+.+ ..++
T Consensus       105 ~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  181 (298)
T cd07841         105 KSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYG  181 (298)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCC
Confidence            5789999999999999   99999999999999987653                        356999998865 4678


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---------Cccchhhhhcc-----cccchHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---------GEFQDLIIVCG-----MEKNNKEKAER  122 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~-----~~~~~~~~~~~  122 (291)
                      .++|||||||++||+++|.++|......    ............         ...........     ...........
T Consensus       182 ~~~Dv~slG~il~e~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (298)
T cd07841         182 VGVDMWSVGCIFAELLLRVPFLPGDSDI----DQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDD  257 (298)
T ss_pred             cHHHHHHHHHHHHHHHcCCccccCCccH----HHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHH
Confidence            8999999999999999998777543321    011111100000         00000000000     00111233567


Q ss_pred             HHHHHHHccccCCCCCCCCCcc
Q 022858          123 MALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       123 ~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +.+++.+||+.+|++||++.++
T Consensus       258 ~~~li~~~l~~~P~~R~s~~e~  279 (298)
T cd07841         258 ALDLLQRLLTLNPNKRITARQA  279 (298)
T ss_pred             HHHHHHHHhcCCcccCcCHHHH
Confidence            8899999999999999999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.83  E-value=1.6e-21  Score=169.00  Aligned_cols=127  Identities=22%  Similarity=0.231  Sum_probs=93.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCC----
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFP----   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~----   54 (291)
                      ..|+.|++.||+|||+.  ++|+||||+|+||+++.++.                       +..|+|||++.+..    
T Consensus       117 ~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  194 (296)
T cd06618         117 GKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPK  194 (296)
T ss_pred             HHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccc
Confidence            46899999999999972  58999999999999986542                       45799999987543    


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||||+++|||++|+.||......      .+...... .......       +........+.+++.+|++.+
T Consensus       195 ~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~-~~~~~~~-------~~~~~~~~~l~~li~~~l~~~  260 (296)
T cd06618         195 YDIRADVWSLGISLVELATGQFPYKNCKTE------FEVLTKIL-QEEPPSL-------PPNEGFSPDFCSFVDLCLTKD  260 (296)
T ss_pred             cccchhHHHHHHHHHHHHhCCCCCCcchhH------HHHHHHHh-cCCCCCC-------CCCCCCCHHHHHHHHHHccCC
Confidence            788999999999999999999998643211      11111111 1111110       011123467899999999999


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |++||++.++
T Consensus       261 p~~Rp~~~~i  270 (296)
T cd06618         261 HRKRPKYREL  270 (296)
T ss_pred             hhhCCCHHHH
Confidence            9999999999

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.83  E-value=6.9e-22  Score=170.04  Aligned_cols=140  Identities=21%  Similarity=0.211  Sum_probs=93.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      +.++.|++.||+|||+   .+++|+||+|+||+++.++.                        +..|+|||++.+ ..++
T Consensus       103 ~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  179 (286)
T cd07846         103 RKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYG  179 (286)
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccC
Confidence            5688999999999999   99999999999999987643                        456999998875 3577


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchh-------HHHHHHhhcCc------cchhhhhcccccchHHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGF-------KWVWKKLEKGE------FQDLIIVCGMEKNNKEKAERM  123 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~-------~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~  123 (291)
                      .++||||||+++|||++|.+||...........+.       ...........      ..+...........+.....+
T Consensus       180 ~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (286)
T cd07846         180 RAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLV  259 (286)
T ss_pred             chHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHH
Confidence            89999999999999999998886443210000000       00000000000      000000000000111235678


Q ss_pred             HHHHHHccccCCCCCCCCCcc
Q 022858          124 ALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       124 ~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .+++.+||+.+|++||++.++
T Consensus       260 ~~li~~~l~~~P~~Rp~~~~i  280 (286)
T cd07846         260 LDLAKQCLRIDPDDRPSSSQL  280 (286)
T ss_pred             HHHHHHHhcCCcccchhHHHH
Confidence            899999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.83  E-value=6.4e-22  Score=170.07  Aligned_cols=138  Identities=21%  Similarity=0.263  Sum_probs=93.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ++++.|++.||+|||+   ++++|+||+|+||+++.++.                        +..|+|||++.+. .++
T Consensus       102 ~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  178 (283)
T cd07835         102 KSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYS  178 (283)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccC
Confidence            5789999999999999   99999999999999986542                        4569999988764 578


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhH-------HHHHHhhcCccchhhhh------cccccchHHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFK-------WVWKKLEKGEFQDLIIV------CGMEKNNKEKAERM  123 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~  123 (291)
                      .++||||||+++|||++|+.||..............       ..+....  .+.+....      .............+
T Consensus       179 ~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (283)
T cd07835         179 TPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVT--SLPDYKPTFPKWARQDLSKVVPNLDEDG  256 (283)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhh--hchhhhhhcccccccchhhhcCCCCHHH
Confidence            899999999999999999999865432100000000       0000000  00000000      00000111223678


Q ss_pred             HHHHHHccccCCCCCCCCCcc
Q 022858          124 ALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       124 ~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .+++.+|++.+|++||++.++
T Consensus       257 ~~li~~~l~~~P~~Rpt~~~i  277 (283)
T cd07835         257 LDLLSKMLVYDPAKRISAKAA  277 (283)
T ss_pred             HHHHHHHhcCChhhCcCHHHH
Confidence            899999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.83  E-value=2.8e-21  Score=164.72  Aligned_cols=127  Identities=20%  Similarity=0.251  Sum_probs=92.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCcccc---CCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWM---SFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~---~~~   54 (291)
                      +.++.|++.||.|||+   .+++|+||||+||+++.++.                        +..|+|||++.   ...
T Consensus       109 ~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  185 (267)
T cd06645         109 AYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGG  185 (267)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCC
Confidence            4688999999999999   99999999999999986532                        56899999874   446


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++|||||||++|||++|..|+.......       .... ........   + .. .........+.+++.+|++.+
T Consensus       186 ~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~-------~~~~-~~~~~~~~---~-~~-~~~~~~~~~~~~li~~~l~~~  252 (267)
T cd06645         186 YNQLCDIWAVGITAIELAELQPPMFDLHPMR-------ALFL-MTKSNFQP---P-KL-KDKMKWSNSFHHFVKMALTKN  252 (267)
T ss_pred             CCchhhhHHHHHHHHHHhcCCCCcccccchh-------hHHh-hhccCCCC---C-cc-cccCCCCHHHHHHHHHHccCC
Confidence            8889999999999999999999985443210       0111 00111100   0 00 001112356788999999999


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |++||++.++
T Consensus       253 P~~R~~~~~l  262 (267)
T cd06645         253 PKKRPTAEKL  262 (267)
T ss_pred             chhCcCHHHH
Confidence            9999999888

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=1e-21  Score=165.84  Aligned_cols=147  Identities=18%  Similarity=0.162  Sum_probs=99.9

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccC-CCCc
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      ++.|+++||.|+|+   -+|+||||||+|+|++.+..                          |.+|.|||.+.. ..|+
T Consensus       130 f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt  206 (359)
T KOG0660|consen  130 FLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYT  206 (359)
T ss_pred             HHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhcccccc
Confidence            56799999999999   89999999999999986532                          889999998875 5899


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCc-------hhHHHHHHhhcCccchhhhhc-cc-----ccchHHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPS-------GFKWVWKKLEKGEFQDLIIVC-GM-----EKNNKEKAERM  123 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~  123 (291)
                      ...||||.||++.||++|++.|.+.........       -.......+........+... ..     ....+......
T Consensus       207 ~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~A  286 (359)
T KOG0660|consen  207 KAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLA  286 (359)
T ss_pred             chhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHH
Confidence            999999999999999999999977653311000       001111111111111111110 00     11112334566


Q ss_pred             HHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          124 ALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       124 ~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      ++|..++|..||.+|+|+.|......|...
T Consensus       287 idLlekmL~fdP~kRita~eAL~hPYl~~~  316 (359)
T KOG0660|consen  287 IDLLEKMLVFDPKKRITAEEALAHPYLAPY  316 (359)
T ss_pred             HHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence            889999999999999999988323334433

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.83  E-value=1.7e-21  Score=171.88  Aligned_cols=119  Identities=24%  Similarity=0.322  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------------------------
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------------------------   40 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------------------------   40 (291)
                      ++.+++.|++-||.   .++|||||||+|+|||..+.                                           
T Consensus       246 YiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (550)
T KOG0605|consen  246 YIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFN  322 (550)
T ss_pred             HHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccc
Confidence            46678999999999   99999999999999996543                                           


Q ss_pred             ----------------------------CCccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhH
Q 022858           41 ----------------------------TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFK   92 (291)
Q Consensus        41 ----------------------------t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~   92 (291)
                                                  ||-|||||++.+..|+..+|.||+|||+||||.|.+||....+.+....+.+
T Consensus       323 ~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~n  402 (550)
T KOG0605|consen  323 TPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVN  402 (550)
T ss_pred             cccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence                                        8999999999999999999999999999999999999998887655555555


Q ss_pred             HHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCC
Q 022858           93 WVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPS  140 (291)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs  140 (291)
                      |-....              .+...++..+..+|+.+|+. ||++|-.
T Consensus       403 wr~~l~--------------fP~~~~~s~eA~DLI~rll~-d~~~RLG  435 (550)
T KOG0605|consen  403 WRETLK--------------FPEEVDLSDEAKDLITRLLC-DPENRLG  435 (550)
T ss_pred             Hhhhcc--------------CCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence            432211              11122233667788888888 9999976

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.83  E-value=9.4e-22  Score=170.06  Aligned_cols=136  Identities=18%  Similarity=0.245  Sum_probs=93.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc-CCC------------------------CCccccCccccC-CCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV-KFW------------------------TPGYAAPETWMS-FPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~-~~~------------------------t~~y~aPE~~~~-~~~   55 (291)
                      +.++.||+.||.|||+   .+|+||||||+||+++. ++.                        ++.|+|||.+.+ ..+
T Consensus       113 ~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~  189 (295)
T cd07837         113 KSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHY  189 (295)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCC
Confidence            4688999999999999   99999999999999997 321                        446999998865 457


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCc---c------chhh-----hhcccccchHHHHH
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGE---F------QDLI-----IVCGMEKNNKEKAE  121 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~-----~~~~~~~~~~~~~~  121 (291)
                      +.++||||||+++|||++|..||........    ...+........   .      ....     .+.......+....
T Consensus       190 ~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (295)
T cd07837         190 STPVDIWSVGCIFAEMSRKQPLFPGDSELQQ----LLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSP  265 (295)
T ss_pred             CchHHHHHHHHHHHHHHcCCCCCCCCCHHHH----HHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCH
Confidence            8999999999999999999999865432110    000000000000   0      0000     00000001122456


Q ss_pred             HHHHHHHHccccCCCCCCCCCcc
Q 022858          122 RMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       122 ~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .+.+++.+||+.+|.+||++.++
T Consensus       266 ~~~~~i~~~l~~~P~~R~~~~ei  288 (295)
T cd07837         266 EGLDLLQKMLRYDPAKRISAKAA  288 (295)
T ss_pred             HHHHHHHHHccCChhhcCCHHHH
Confidence            78899999999999999999888

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.83  E-value=2e-21  Score=165.41  Aligned_cols=124  Identities=18%  Similarity=0.165  Sum_probs=94.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------------CCccccCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------------TPGYAAPETWM   51 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------------t~~y~aPE~~~   51 (291)
                      ..++.|++.||+|||+   .+|+|+||||+||+++.++.                              +..|+|||++.
T Consensus       105 ~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  181 (265)
T cd06631         105 CKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVIN  181 (265)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhc
Confidence            3578999999999999   89999999999999985432                              45699999999


Q ss_pred             CCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhh-cCccchhhhhcccccchHHHHHHHHHHHHHc
Q 022858           52 SFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLE-KGEFQDLIIVCGMEKNNKEKAERMALVALWR  130 (291)
Q Consensus        52 ~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c  130 (291)
                      +..++.++||||||+++||+++|..||......      .. ...... .+...         ..+......+.+++.+|
T Consensus       182 ~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~-~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~~  245 (265)
T cd06631         182 ESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL------AA-MFYIGAHRGLMP---------RLPDSFSAAAIDFVTSC  245 (265)
T ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCccccCChH------HH-HHHhhhccCCCC---------CCCCCCCHHHHHHHHHH
Confidence            888999999999999999999999998643211      00 000000 01111         11122346778999999


Q ss_pred             cccCCCCCCCCCcc
Q 022858          131 VQYKPEAMPSMTVR  144 (291)
Q Consensus       131 l~~~p~~RPs~~~v  144 (291)
                      ++.+|++||++.++
T Consensus       246 l~~~p~~Rp~~~~~  259 (265)
T cd06631         246 LTRDQHERPSALQL  259 (265)
T ss_pred             hcCCcccCCCHHHH
Confidence            99999999999988

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.83  E-value=1.9e-21  Score=169.46  Aligned_cols=137  Identities=20%  Similarity=0.224  Sum_probs=94.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      ..++.|++.||.|||+.  .+++|+||||+|||++.++.                      +..|+|||.+.+..++.++
T Consensus       102 ~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~  179 (308)
T cd06615         102 GKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQS  179 (308)
T ss_pred             HHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCCCcCccChhHhcCCCCCccc
Confidence            46889999999999972  58999999999999986542                      5689999998888899999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCc--------------------cchhhhhc----ccccc
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGE--------------------FQDLIIVC----GMEKN  115 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~----~~~~~  115 (291)
                      ||||||+++|||++|..||.......    .............                    ..+..+..    .....
T Consensus       180 DiwslG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (308)
T cd06615         180 DIWSLGLSLVEMAIGRYPIPPPDAKE----LEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLP  255 (308)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcchhh----HHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCc
Confidence            99999999999999999986433210    0000000000000                    00000000    00000


Q ss_pred             hHHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          116 NKEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       116 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .......+.+++.+|++.+|++||++.++
T Consensus       256 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~l  284 (308)
T cd06615         256 SGAFSDEFQDFVDKCLKKNPKERADLKEL  284 (308)
T ss_pred             CcccCHHHHHHHHHHccCChhhCcCHHHH
Confidence            01134568899999999999999999999

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.83  E-value=2.6e-21  Score=170.52  Aligned_cols=151  Identities=19%  Similarity=0.218  Sum_probs=100.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccC-
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMS-   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~-   52 (291)
                      ..++.|++.||+|||+   .+|+||||||+||+++.++.                            +..|+|||.+.+ 
T Consensus       110 ~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  186 (334)
T cd07855         110 RYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSL  186 (334)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCC
Confidence            4688999999999999   99999999999999987643                            456999998765 


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchh-------HHHHHHhhcCccchhhhhc-cccc-----chHHH
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGF-------KWVWKKLEKGEFQDLIIVC-GMEK-----NNKEK  119 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~  119 (291)
                      ..++.++||||||+++|||++|+.||...........+.       ...........+....... ....     ..+..
T Consensus       187 ~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (334)
T cd07855         187 PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKA  266 (334)
T ss_pred             cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccC
Confidence            468899999999999999999999996543210000000       0000000000000110000 0000     11223


Q ss_pred             HHHHHHHHHHccccCCCCCCCCCccchhhhhhcccc
Q 022858          120 AERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       120 ~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ...+.+++.+|++.+|++||++.++.....+++...
T Consensus       267 ~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~  302 (334)
T cd07855         267 SPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHD  302 (334)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccC
Confidence            577899999999999999999999843444544433

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.83  E-value=7.5e-21  Score=163.20  Aligned_cols=139  Identities=21%  Similarity=0.269  Sum_probs=96.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      +.++.|++.||+|||+   .+|+|+||||+||+++.++.                        +..|+|||.+.+. .++
T Consensus       101 ~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~  177 (283)
T cd05118         101 KSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYS  177 (283)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCC
Confidence            4688999999999999   99999999999999996543                        4469999998876 788


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhH-------HHHHHhhc----C--ccchhhhhcccccchHHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFK-------WVWKKLEK----G--EFQDLIIVCGMEKNNKEKAERM  123 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~-------~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~  123 (291)
                      .++|+||+|+++|++++|+.||..............       ..+.....    .  ......+. ............+
T Consensus       178 ~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  256 (283)
T cd05118         178 TPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGM-PLPKLFPNASPQA  256 (283)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhcccccc-CHHHhhhhhCHHH
Confidence            999999999999999999999865432100000000       00000000    0  00000000 0011123456788


Q ss_pred             HHHHHHccccCCCCCCCCCcc
Q 022858          124 ALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       124 ~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .+++..||+.||.+||++.++
T Consensus       257 ~~~i~~~l~~~P~~Rp~~~~l  277 (283)
T cd05118         257 LDLLSQMLHYDPHKRITAEQA  277 (283)
T ss_pred             HHHHHHHhccCcccCcCHHHH
Confidence            999999999999999999988

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.83  E-value=5.1e-21  Score=163.03  Aligned_cols=127  Identities=22%  Similarity=0.280  Sum_probs=95.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------CCccccCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------TPGYAAPETWMS   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------t~~y~aPE~~~~   52 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.+..                             +..|+|||.+.+
T Consensus       106 ~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~  182 (268)
T cd06630         106 INYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRG  182 (268)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhcc
Confidence            5688999999999999   99999999999999975531                             346999999988


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++||||+|+++|++++|..||......    .............         .....+......+.+++.+|++
T Consensus       183 ~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~  249 (268)
T cd06630         183 EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS----NHLALIFKIASAT---------TAPSIPEHLSPGLRDVTLRCLE  249 (268)
T ss_pred             CCCCcccchHHHHHHHHHHHhCCCCCCCCCCc----chHHHHHHHhccC---------CCCCCchhhCHHHHHHHHHHcC
Confidence            88999999999999999999999998643321    0111111111000         0112223345678899999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .+|++||++.++
T Consensus       250 ~~p~~R~~~~~l  261 (268)
T cd06630         250 LQPEDRPPSREL  261 (268)
T ss_pred             CCcccCcCHHHH
Confidence            999999999888

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=9e-22  Score=175.47  Aligned_cols=125  Identities=23%  Similarity=0.315  Sum_probs=90.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC------------------------------------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------------------------   39 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~------------------------------------------   39 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.++                                          
T Consensus       104 ~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (364)
T cd05599         104 RFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMS  180 (364)
T ss_pred             HHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceecccccccccccccccccccccccccccccc
Confidence            3578999999999999   9999999999999997543                                          


Q ss_pred             --------------------CCCccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhh
Q 022858           40 --------------------WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLE   99 (291)
Q Consensus        40 --------------------~t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~   99 (291)
                                          +|+.|+|||++.+..++.++|||||||++|||++|..||......       . ....+.
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~-------~-~~~~i~  252 (364)
T cd05599         181 SKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQ-------E-TYRKII  252 (364)
T ss_pred             ccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHH-------H-HHHHHH
Confidence                                256799999999889999999999999999999999999755421       1 111111


Q ss_pred             cCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCC---CCcc
Q 022858          100 KGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPS---MTVR  144 (291)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs---~~~v  144 (291)
                      ... ..+..+     ........+.+++.+|+. +|.+|++   +.++
T Consensus       253 ~~~-~~~~~~-----~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~l  293 (364)
T cd05599         253 NWK-ETLQFP-----DEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEI  293 (364)
T ss_pred             cCC-CccCCC-----CCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHH
Confidence            100 000000     111123456677778886 8999998   6666

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.83  E-value=3.6e-21  Score=170.24  Aligned_cols=147  Identities=16%  Similarity=0.170  Sum_probs=99.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccC-CCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMS-FPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~-~~~~~~~   59 (291)
                      ..++.|++.||+|||+   .+++||||||+||+++.++.                     +..|+|||.+.+ ..++.++
T Consensus       120 ~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  196 (342)
T cd07879         120 QYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTV  196 (342)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchH
Confidence            3578999999999999   99999999999999987643                     457999999876 4688999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHH-----------HHhhcCccchhhhh-cc-----cccchHHHHHH
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVW-----------KKLEKGEFQDLIIV-CG-----MEKNNKEKAER  122 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~  122 (291)
                      |||||||++|||++|+.||.......    ......           +............. ..     .....+.....
T Consensus       197 Dv~slGvil~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (342)
T cd07879         197 DIWSVGCIMAEMLTGKTLFKGKDYLD----QLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQ  272 (342)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHH
Confidence            99999999999999999997543210    000000           00000000000000 00     00000122356


Q ss_pred             HHHHHHHccccCCCCCCCCCccchhhhhhcccc
Q 022858          123 MALVALWRVQYKPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       123 ~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      +.+++.+|++.||++||++.++.....++....
T Consensus       273 ~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         273 AVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence            789999999999999999999943355666544

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.83  E-value=1.7e-21  Score=174.74  Aligned_cols=131  Identities=22%  Similarity=0.212  Sum_probs=91.0

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-------------------------------------------
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-------------------------------------------   39 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-------------------------------------------   39 (291)
                      .++.|++.||+|||+   .+|+||||||+|||++.++                                           
T Consensus       105 ~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (381)
T cd05626         105 FYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVS  181 (381)
T ss_pred             HHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCccccccccc
Confidence            467899999999999   9999999999999997432                                           


Q ss_pred             ----------------------------CCCccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchh
Q 022858           40 ----------------------------WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGF   91 (291)
Q Consensus        40 ----------------------------~t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~   91 (291)
                                                  +|+.|+|||++.+..++.++|||||||++|||++|..||.......      
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~------  255 (381)
T cd05626         182 NCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTE------  255 (381)
T ss_pred             ccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHH------
Confidence                                        2567999999998889999999999999999999999997544220      


Q ss_pred             HHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHH--ccccCCCCCCCCCccchhhhh
Q 022858           92 KWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALW--RVQYKPEAMPSMTVRPAKFML  150 (291)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--cl~~~p~~RPs~~~v~~~~~L  150 (291)
                       ..............       +........+.+++.+  |+..++..||++.++.....+
T Consensus       256 -~~~~i~~~~~~~~~-------~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f  308 (381)
T cd05626         256 -TQLKVINWENTLHI-------PPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFF  308 (381)
T ss_pred             -HHHHHHccccccCC-------CCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCccc
Confidence             01111100000000       0001122345555554  667777789999998333333

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=6.8e-21  Score=172.46  Aligned_cols=118  Identities=22%  Similarity=0.277  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcccc
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      ++..|+.||.|||+   ++||+||||.+|||||.++.                        |+.|||||++.+..|+..+
T Consensus       473 yaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aV  549 (694)
T KOG0694|consen  473 YAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAV  549 (694)
T ss_pred             HHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchh
Confidence            67889999999999   99999999999999997653                        9999999999999999999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      |-|||||+||||+.|+.||.+....+        +...+..          ....++.-...+.+.|+.+.+..+|++|-
T Consensus       550 DWW~lGVLlyeML~Gq~PF~gddEee--------~FdsI~~----------d~~~yP~~ls~ea~~il~~ll~k~p~kRL  611 (694)
T KOG0694|consen  550 DWWGLGVLLYEMLVGESPFPGDDEEE--------VFDSIVN----------DEVRYPRFLSKEAIAIMRRLLRKNPEKRL  611 (694)
T ss_pred             hHHHHHHHHHHHHcCCCCCCCCCHHH--------HHHHHhc----------CCCCCCCcccHHHHHHHHHHhccCccccc
Confidence            99999999999999999998766431        1111111          01234455667889999999999999998


Q ss_pred             CCC
Q 022858          140 SMT  142 (291)
Q Consensus       140 s~~  142 (291)
                      .+.
T Consensus       612 G~~  614 (694)
T KOG0694|consen  612 GSG  614 (694)
T ss_pred             CCC
Confidence            874

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=1.9e-21  Score=169.94  Aligned_cols=124  Identities=20%  Similarity=0.102  Sum_probs=93.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------------------   40 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------------------   40 (291)
                      ..++.|++.||+|||+   .+++|+||||+||+++.++.                                         
T Consensus       106 ~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (316)
T cd05574         106 RFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFS  182 (316)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhc
Confidence            4578999999999999   99999999999999986532                                         


Q ss_pred             ------------CCccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhh
Q 022858           41 ------------TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLII  108 (291)
Q Consensus        41 ------------t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (291)
                                  +..|+|||++.+..++.++||||||+++|+|++|..||......       ....... .        
T Consensus       183 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-------~~~~~~~-~--------  246 (316)
T cd05574         183 EEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD-------ETFSNIL-K--------  246 (316)
T ss_pred             ccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH-------HHHHHHh-c--------
Confidence                        23599999999888999999999999999999999998654321       0011111 1        


Q ss_pred             hcccccchHHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          109 VCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       109 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ..............+.+++.+|++.+|++||++...
T Consensus       247 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~  282 (316)
T cd05574         247 KEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRG  282 (316)
T ss_pred             CCccCCCccccCHHHHHHHHHHccCCHhHCCCchhh
Confidence            000011111145788999999999999999994333

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.83  E-value=4.3e-21  Score=162.19  Aligned_cols=123  Identities=28%  Similarity=0.389  Sum_probs=97.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      ..++.|++.||+|||+   .+++|+||+|+||+++.+..                      +..|++||.+.+..++.++
T Consensus       106 ~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~  182 (256)
T cd08530         106 WRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKS  182 (256)
T ss_pred             HHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchh
Confidence            4688899999999999   99999999999999986532                      6689999999888899999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      |+||+|+++||+++|+.|+......        ........+...         .........+.+++.+|++.+|++||
T Consensus       183 D~~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp  245 (256)
T cd08530         183 DIWSLGCLLYEMATFAPPFEARSMQ--------DLRYKVQRGKYP---------PIPPIYSQDLQNFIRSMLQVKPKLRP  245 (256)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCCCC---------CCchhhCHHHHHHHHHHcCCCcccCC
Confidence            9999999999999999998654321        111122222111         12224456789999999999999999


Q ss_pred             CCCcc
Q 022858          140 SMTVR  144 (291)
Q Consensus       140 s~~~v  144 (291)
                      ++.++
T Consensus       246 ~~~~~  250 (256)
T cd08530         246 NCDKI  250 (256)
T ss_pred             CHHHH
Confidence            99988

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.83  E-value=4.2e-21  Score=163.50  Aligned_cols=123  Identities=21%  Similarity=0.155  Sum_probs=92.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      ++++.|++.||+|||+   .+++|+||||+||+++.++.                           +..|+|||++.+..
T Consensus       109 ~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  185 (265)
T cd06652         109 RKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEG  185 (265)
T ss_pred             HHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCC
Confidence            5688999999999999   99999999999999986532                           44699999998888


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||||+++|||++|+.||......       ..........         .....+......+.+++.+|+. +
T Consensus       186 ~~~~~Dv~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~-~  248 (265)
T cd06652         186 YGRKADIWSVGCTVVEMLTEKPPWAEFEAM-------AAIFKIATQP---------TNPVLPPHVSDHCRDFLKRIFV-E  248 (265)
T ss_pred             CCcchhHHHHHHHHHHHhhCCCCCCccchH-------HHHHHHhcCC---------CCCCCchhhCHHHHHHHHHHhc-C
Confidence            999999999999999999999998643211       1111111100         0111223344667778888885 8


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |++||++.++
T Consensus       249 p~~Rp~~~~i  258 (265)
T cd06652         249 AKLRPSADEL  258 (265)
T ss_pred             hhhCCCHHHH
Confidence            9999999988

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.83  E-value=3.9e-21  Score=163.46  Aligned_cols=128  Identities=22%  Similarity=0.232  Sum_probs=95.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMSF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~~   53 (291)
                      ..++.|++.||+|||+   .+++|+||||+||+++.+..                            +..|++||++...
T Consensus       105 ~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~  181 (267)
T cd06610         105 ATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQV  181 (267)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccc
Confidence            3578999999999999   99999999999999997643                            4469999998876


Q ss_pred             -CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           54 -PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        54 -~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                       .++.++|+||||+++|||++|+.|+.......       ........ ..... ..   ..........+.+++.+|++
T Consensus       182 ~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-------~~~~~~~~-~~~~~-~~---~~~~~~~~~~~~~li~~~l~  249 (267)
T cd06610         182 HGYDFKADIWSFGITAIELATGAAPYSKYPPMK-------VLMLTLQN-DPPSL-ET---GADYKKYSKSFRKMISLCLQ  249 (267)
T ss_pred             cCcCcccchHhHhHHHHHHHhCCCCccccChhh-------hHHHHhcC-CCCCc-CC---ccccccccHHHHHHHHHHcC
Confidence             78899999999999999999999986543321       01111111 00000 00   00112345678899999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .||++||++.++
T Consensus       250 ~~p~~Rp~~~~l  261 (267)
T cd06610         250 KDPSKRPTAEEL  261 (267)
T ss_pred             CChhhCcCHHHH
Confidence            999999999888

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=2.1e-21  Score=166.72  Aligned_cols=125  Identities=23%  Similarity=0.259  Sum_probs=93.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCcccc-----C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWM-----S   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~-----~   52 (291)
                      ..++.|++.||.|||+   .+|+|+||||+||+++.++.                        ++.|++||.+.     .
T Consensus       106 ~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  182 (280)
T cd06611         106 RYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKD  182 (280)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCC
Confidence            4688999999999999   99999999999999986532                        56799999875     3


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++||||||+++|||++|+.||......       . .......+....+       ..+......+.+++..||+
T Consensus       183 ~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-------~-~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~  247 (280)
T cd06611         183 NPYDYKADIWSLGITLIELAQMEPPHHELNPM-------R-VLLKILKSEPPTL-------DQPSKWSSSFNDFLKSCLV  247 (280)
T ss_pred             CCCCccccHHHHHHHHHHHHhCCCCcccCCHH-------H-HHHHHhcCCCCCc-------CCcccCCHHHHHHHHHHhc
Confidence            45778999999999999999999998654321       1 1111111111100       1112234567889999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .+|++||++.++
T Consensus       248 ~~p~~Rps~~~i  259 (280)
T cd06611         248 KDPDDRPTAAEL  259 (280)
T ss_pred             cChhhCcCHHHH
Confidence            999999999999

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.83  E-value=2.5e-21  Score=172.96  Aligned_cols=126  Identities=20%  Similarity=0.219  Sum_probs=88.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCC---
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSF---   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~---   53 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                         |+.|+|||++.+.   
T Consensus       145 ~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~  221 (370)
T cd05621         145 KFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGD  221 (370)
T ss_pred             HHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCC
Confidence            3578899999999999   99999999999999986532                         7789999998754   


Q ss_pred             -CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           54 -PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        54 -~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                       .++.++||||+||++|||++|+.||......       ..............       .+........+.+++..|++
T Consensus       222 ~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~-------~~~~~i~~~~~~~~-------~p~~~~~s~~~~~li~~~L~  287 (370)
T cd05621         222 GYYGRECDWWSVGVFLFEMLVGDTPFYADSLV-------GTYSKIMDHKNSLN-------FPEDVEISKHAKNLICAFLT  287 (370)
T ss_pred             CCCCcccCEEeehHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCcccC-------CCCcccCCHHHHHHHHHHcc
Confidence             3788999999999999999999999754321       11111111100000       01111224556677778887


Q ss_pred             cCCCC--CCCCCcc
Q 022858          133 YKPEA--MPSMTVR  144 (291)
Q Consensus       133 ~~p~~--RPs~~~v  144 (291)
                      .++..  ||++.++
T Consensus       288 ~~~~r~~R~~~~e~  301 (370)
T cd05621         288 DREVRLGRNGVEEI  301 (370)
T ss_pred             CchhccCCCCHHHH
Confidence            55433  7888887

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.83  E-value=4.9e-21  Score=165.74  Aligned_cols=125  Identities=20%  Similarity=0.203  Sum_probs=95.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||.|||+   .+++|+||||+||+++.++.                        ++.|++||.+....++.
T Consensus       118 ~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  194 (293)
T cd06647         118 AAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP  194 (293)
T ss_pred             HHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhccCCCCc
Confidence            4688999999999999   99999999999999986542                        44599999998888899


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|+||||+++||+++|+.||.........       ......+        .............+.+++.+||+.+|++
T Consensus       195 ~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~-------~~~~~~~--------~~~~~~~~~~~~~l~~li~~~l~~~p~~  259 (293)
T cd06647         195 KVDIWSLGIMAIEMVEGEPPYLNENPLRAL-------YLIATNG--------TPELQNPEKLSAIFRDFLNRCLEMDVEK  259 (293)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCChhhhe-------eehhcCC--------CCCCCCccccCHHHHHHHHHHccCChhh
Confidence            999999999999999999999654332110       0000000        0001112223456788999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       260 Rp~~~~i  266 (293)
T cd06647         260 RGSAKEL  266 (293)
T ss_pred             CcCHHHH
Confidence            9999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.83  E-value=8.7e-21  Score=165.04  Aligned_cols=132  Identities=16%  Similarity=0.166  Sum_probs=98.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------------------CC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------------------TP   42 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------------------t~   42 (291)
                      ..++.|++.||+|||+   .+++||||||+||+++.++.                                       +.
T Consensus       104 ~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (305)
T cd05609         104 RMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTP  180 (305)
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCc
Confidence            4578899999999999   99999999999999986532                                       23


Q ss_pred             ccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHH
Q 022858           43 GYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAER  122 (291)
Q Consensus        43 ~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (291)
                      .|+|||.+.+..++.++|+||||+++||+++|..||......        .+......+....   +    ......+..
T Consensus       181 ~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~--------~~~~~~~~~~~~~---~----~~~~~~~~~  245 (305)
T cd05609         181 EYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE--------ELFGQVISDDIEW---P----EGDEALPAD  245 (305)
T ss_pred             cccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhcccCC---C----CccccCCHH
Confidence            599999998888999999999999999999999998643321        1112211111100   0    001123466


Q ss_pred             HHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          123 MALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       123 ~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      +.+++.+|++.+|++||++.++  .+.|+..
T Consensus       246 ~~~li~~~l~~~P~~R~~~~~~--~~ll~~~  274 (305)
T cd05609         246 AQDLISRLLRQNPLERLGTGGA--FEVKQHR  274 (305)
T ss_pred             HHHHHHHHhccChhhccCccCH--HHHHhCc
Confidence            7899999999999999998877  6666553

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.83  E-value=3.9e-21  Score=167.58  Aligned_cols=124  Identities=24%  Similarity=0.286  Sum_probs=93.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------CCccccCcccc---CCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------TPGYAAPETWM---SFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------t~~y~aPE~~~---~~~~~~~   58 (291)
                      +.++.|++.||.|||+   .+++||||||+||+++.++.                    ++.|+|||.+.   ...++.+
T Consensus       118 ~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  194 (308)
T cd06634         118 AAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGK  194 (308)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCccccCHHHHhhcccCCCCcc
Confidence            4678899999999999   99999999999999987643                    57899999875   3467889


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|||||||++|||++|..|+......       .... ....+....        .........+.+++.+||+.+|++|
T Consensus       195 ~Di~slG~il~el~~g~~p~~~~~~~-------~~~~-~~~~~~~~~--------~~~~~~~~~~~~li~~cl~~~P~~R  258 (308)
T cd06634         195 VDVWSLGITCIELAERKPPLFNMNAM-------SALY-HIAQNESPA--------LQSGHWSEYFRNFVDSCLQKIPQDR  258 (308)
T ss_pred             cchHHHHHHHHHHHcCCCCCccccHH-------HHHH-HHhhcCCCC--------cCcccccHHHHHHHHHHhhCCcccC
Confidence            99999999999999999997543211       1111 111111110        1112344668899999999999999


Q ss_pred             CCCCcc
Q 022858          139 PSMTVR  144 (291)
Q Consensus       139 Ps~~~v  144 (291)
                      |++.++
T Consensus       259 p~~~~l  264 (308)
T cd06634         259 PTSEVL  264 (308)
T ss_pred             CCHHHH
Confidence            999998

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.83  E-value=5.2e-21  Score=184.39  Aligned_cols=135  Identities=20%  Similarity=0.304  Sum_probs=96.9

Q ss_pred             hhHHHHHHHHHHHHhcCC----CCCeEeecCCCCcEEEccC------------------------C--------------
Q 022858            2 HIIAIGTAEGIVSLHDGC----QQQIIHYNIKPENILLDVK------------------------F--------------   39 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~----~~~ivH~Dlkp~NIll~~~------------------------~--------------   39 (291)
                      +.|+.||+.||+|||+..    ..+||||||||+||||+..                        +              
T Consensus       121 l~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s  200 (1021)
T PTZ00266        121 VDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHS  200 (1021)
T ss_pred             HHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccccc
Confidence            578999999999999832    1459999999999999531                        1              


Q ss_pred             --CCCccccCccccC--CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccc
Q 022858           40 --WTPGYAAPETWMS--FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKN  115 (291)
Q Consensus        40 --~t~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (291)
                        +++.|+|||++.+  ..++.++|||||||++|||++|..||.....       ...+...+....  .+        .
T Consensus       201 ~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~-------~~qli~~lk~~p--~l--------p  263 (1021)
T PTZ00266        201 CVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN-------FSQLISELKRGP--DL--------P  263 (1021)
T ss_pred             cCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc-------HHHHHHHHhcCC--CC--------C
Confidence              1778999999864  4588999999999999999999999964332       111222221110  00        0


Q ss_pred             hHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          116 NKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       116 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      .......+.+|+..||+.+|.+||++.|++....+...
T Consensus       264 i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        264 IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence            11124678899999999999999999998322444433

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.83  E-value=1e-21  Score=173.31  Aligned_cols=145  Identities=19%  Similarity=0.189  Sum_probs=96.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccC-C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMS-F   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~-~   53 (291)
                      ..++.|++.||+|||+   .+|+||||||+||+++.++.                           +..|+|||.+.+ .
T Consensus       109 ~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  185 (336)
T cd07849         109 QYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSK  185 (336)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCC
Confidence            4578999999999999   99999999999999986542                           456999998765 4


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc-----------Cccchhhhh-ccccc-----ch
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK-----------GEFQDLIIV-CGMEK-----NN  116 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~-~~~~~-----~~  116 (291)
                      .++.++||||+|+++|||++|+.||......    ............           ....+.... .....     ..
T Consensus       186 ~~~~~~DvwslGvil~el~~G~~~f~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (336)
T cd07849         186 GYTKAIDIWSVGCILAEMLSNRPLFPGKDYL----HQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLF  261 (336)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHh
Confidence            6889999999999999999999998643211    000000000000           000000000 00000     01


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          117 KEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       117 ~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      +.....+.+++.+||+.+|++||++.++.....++..
T Consensus       262 ~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         262 PNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             cccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence            1224668899999999999999999999333335433

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.82  E-value=1.4e-20  Score=162.15  Aligned_cols=127  Identities=20%  Similarity=0.231  Sum_probs=94.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCC------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSF------   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~------   53 (291)
                      ..++.|++.||.|||+.  ++|+|+||||+||+++.++.                      +..|+|||.+.+.      
T Consensus       105 ~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  182 (286)
T cd06622         105 RRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNP  182 (286)
T ss_pred             HHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccC
Confidence            56889999999999962  69999999999999987542                      4579999998653      


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      .++.++|||||||++||+++|..||......    ...... .....+.         ....+......+.+++.+|++.
T Consensus       183 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~~-~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~  248 (286)
T cd06622         183 TYTVQSDVWSLGLSILEMALGRYPYPPETYA----NIFAQL-SAIVDGD---------PPTLPSGYSDDAQDFVAKCLNK  248 (286)
T ss_pred             CCCcccchHhHHHHHHHHHhCCCCCCCcchh----hHHHHH-HHHhhcC---------CCCCCcccCHHHHHHHHHHccc
Confidence            3578999999999999999999998643211    111111 1111111         1112233557788999999999


Q ss_pred             CCCCCCCCCcc
Q 022858          134 KPEAMPSMTVR  144 (291)
Q Consensus       134 ~p~~RPs~~~v  144 (291)
                      +|++||++.++
T Consensus       249 ~p~~Rp~~~~l  259 (286)
T cd06622         249 IPNRRPTYAQL  259 (286)
T ss_pred             CcccCCCHHHH
Confidence            99999999998

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.82  E-value=4.1e-21  Score=167.62  Aligned_cols=79  Identities=25%  Similarity=0.338  Sum_probs=68.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc----CCC---------------------------CCccccCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV----KFW---------------------------TPGYAAPETW   50 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~----~~~---------------------------t~~y~aPE~~   50 (291)
                      ..|+.|++.||+|||+   .+|+||||||+||+++.    ++.                           ++.|+|||.+
T Consensus       111 ~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  187 (316)
T cd07842         111 KSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELL  187 (316)
T ss_pred             HHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHH
Confidence            4688999999999999   99999999999999987    321                           4569999988


Q ss_pred             cCC-CCccccceechhHHHHHHhhCCCccccccc
Q 022858           51 MSF-PVTHKCDVRSFGMLLFEILGRRRMRTCQKA   83 (291)
Q Consensus        51 ~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~   83 (291)
                      .+. .++.++||||||++++||++|+.||.....
T Consensus       188 ~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~  221 (316)
T cd07842         188 LGARHYTKAIDIWAIGCIFAELLTLEPIFKGREA  221 (316)
T ss_pred             hCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcc
Confidence            764 578899999999999999999999976544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.82  E-value=1.4e-20  Score=155.45  Aligned_cols=137  Identities=19%  Similarity=0.227  Sum_probs=103.0

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCCc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~~   56 (291)
                      .|.+||+.|+.|||+   .+|.||||||+|+|......                          |+.|.|||++...+|+
T Consensus       165 eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKyd  241 (400)
T KOG0604|consen  165 EIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYD  241 (400)
T ss_pred             HHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhCchhcC
Confidence            588999999999999   99999999999999975422                          8999999999999999


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      ...|+||+||++|-|++|.+||.........+    -....+..+.+ ++.     .+......+..-+++...|..+|.
T Consensus       242 kscdmwSlgVimYIlLCGyPPFYS~hg~aisp----gMk~rI~~gqy-~FP-----~pEWs~VSe~aKdlIR~LLkt~Pt  311 (400)
T KOG0604|consen  242 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISP----GMKRRIRTGQY-EFP-----EPEWSCVSEAAKDLIRKLLKTEPT  311 (400)
T ss_pred             CCCCccchhHHHHHhhcCCCcccccCCccCCh----hHHhHhhccCc-cCC-----ChhHhHHHHHHHHHHHHHhcCCch
Confidence            99999999999999999999998766432222    12223333322 111     112233446666788888999999


Q ss_pred             CCCCCCccchhhhhhc
Q 022858          137 AMPSMTVRPAKFMLHG  152 (291)
Q Consensus       137 ~RPs~~~v~~~~~L~~  152 (291)
                      +|-++.++....++.+
T Consensus       312 eRlTI~~~m~hpwi~~  327 (400)
T KOG0604|consen  312 ERLTIEEVMDHPWINQ  327 (400)
T ss_pred             hheeHHHhhcCchhcc
Confidence            9999999933333433

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.82  E-value=4.3e-21  Score=163.21  Aligned_cols=130  Identities=22%  Similarity=0.254  Sum_probs=96.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      ..++.|++.||+|||+  ..+++|+||||+||+++.++.                      +..|+|||.+.+..++.++
T Consensus       103 ~~~~~~l~~~l~~lH~--~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~  180 (265)
T cd06605         103 GKIAVAVLKGLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKS  180 (265)
T ss_pred             HHHHHHHHHHHHHHcC--CCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchh
Confidence            4688999999999998  379999999999999997643                      5679999999888899999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      ||||||+++|++++|..|+......  .....+.... ........        .........+.+++.+|+..+|++||
T Consensus       181 Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rp  249 (265)
T cd06605         181 DIWSLGLSLIELATGRFPYPPENDP--PDGIFELLQY-IVNEPPPR--------LPSGKFSPDFQDFVNLCLIKDPRERP  249 (265)
T ss_pred             hHHHHHHHHHHHHhCCCCCCccccc--cccHHHHHHH-HhcCCCCC--------CChhhcCHHHHHHHHHHcCCCchhCc
Confidence            9999999999999999998654321  0111111111 11111000        00111456788999999999999999


Q ss_pred             CCCcc
Q 022858          140 SMTVR  144 (291)
Q Consensus       140 s~~~v  144 (291)
                      ++.++
T Consensus       250 t~~~l  254 (265)
T cd06605         250 SYKEL  254 (265)
T ss_pred             CHHHH
Confidence            99988

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.82  E-value=1.3e-21  Score=168.34  Aligned_cols=136  Identities=17%  Similarity=0.225  Sum_probs=93.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCC-CC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSF-PV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~-~~   55 (291)
                      +.++.||+.||+|||+   .+++|+||||+||+++.++.                         +..|+|||++.+. .+
T Consensus       102 ~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  178 (286)
T cd07832         102 KSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKY  178 (286)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccC
Confidence            5688999999999999   99999999999999986532                         4579999998754 46


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC------------ccchhhhhcc----cccchHHH
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG------------EFQDLIIVCG----MEKNNKEK  119 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~----~~~~~~~~  119 (291)
                      +.++||||+|+++|||++|.++|......    .............            ....+..+..    ......+.
T Consensus       179 ~~~~Di~slG~~l~~l~tg~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (286)
T cd07832         179 DPGVDLWAVGCIFAELLNGSPLFPGENDI----EQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDA  254 (286)
T ss_pred             CchhHHHHHHHHHHHHHcCCcCcCCCCHH----HHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCc
Confidence            88999999999999999998777543321    0111111100000            0000000000    00011123


Q ss_pred             HHHHHHHHHHccccCCCCCCCCCcc
Q 022858          120 AERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       120 ~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ...+.+++.+|++.+|.+||++.++
T Consensus       255 ~~~~~~li~~~l~~~p~~R~~~~~~  279 (286)
T cd07832         255 SPEALDLLKGLLVYDPSKRLSAAEA  279 (286)
T ss_pred             cHHHHHHHHHHhccChhhCCCHHHH
Confidence            4788999999999999999999988

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.82  E-value=2.4e-21  Score=167.28  Aligned_cols=137  Identities=15%  Similarity=0.265  Sum_probs=92.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      ..++.|++.||.|||+   .+|+||||||+||+++.++.                        +..|+|||++.+ ..++
T Consensus       106 ~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  182 (291)
T cd07844         106 RLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYS  182 (291)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCCCccccccccccccCCcHHhhcCcccC
Confidence            3578899999999999   99999999999999987542                        456999998875 4578


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---Cccchh-------------hhhcccccc--hHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---GEFQDL-------------IIVCGMEKN--NKE  118 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------~~~~~~~~~--~~~  118 (291)
                      .++||||+|+++|||++|+.||.......   ............   ......             ..+......  ...
T Consensus       183 ~~~Dv~slG~il~~l~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (291)
T cd07844         183 TSLDMWGVGCIFYEMATGRPLFPGSTDVE---DQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLD  259 (291)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCccHH---HHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCC
Confidence            89999999999999999999986443110   000000000000   000000             000000000  001


Q ss_pred             HHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          119 KAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       119 ~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ....+.+++.+|++.+|++||++.++
T Consensus       260 ~~~~~~~li~~~L~~~p~~Rps~~e~  285 (291)
T cd07844         260 RIPHGEELALKFLQYEPKKRISAAEA  285 (291)
T ss_pred             CchhHHHHHHHHhccCcccccCHHHH
Confidence            12566789999999999999999888

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.82  E-value=2.7e-21  Score=173.21  Aligned_cols=132  Identities=20%  Similarity=0.174  Sum_probs=110.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.||+.||+|||+   ..+|||||..+|||+.....                         .+.|||||.++-..++
T Consensus       494 ~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFT  570 (974)
T KOG4257|consen  494 TLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFT  570 (974)
T ss_pred             HHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccchhccc
Confidence            4578899999999999   99999999999999986533                         7789999999999999


Q ss_pred             cccceechhHHHHHHh-hCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEIL-GRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .+||||-|||.+||++ -|..||.+-.+.+                 +--.+......+.++.|+..+..|+.+||+++|
T Consensus       571 tASDVWMFgVCmWEIl~lGvkPfqgvkNsD-----------------VI~~iEnGeRlP~P~nCPp~LYslmskcWayeP  633 (974)
T KOG4257|consen  571 TASDVWMFGVCMWEILSLGVKPFQGVKNSD-----------------VIGHIENGERLPCPPNCPPALYSLMSKCWAYEP  633 (974)
T ss_pred             chhhHHHHHHHHHHHHHhcCCccccccccc-----------------eEEEecCCCCCCCCCCCChHHHHHHHHHhccCc
Confidence            9999999999999988 6999998776542                 111222334456678899999999999999999


Q ss_pred             CCCCCCCccchhhhhhcccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~  155 (291)
                      .+||.+.++  ...|+.+..
T Consensus       634 ~kRPrftei--~~~lsdv~q  651 (974)
T KOG4257|consen  634 SKRPRFTEI--KAILSDVLQ  651 (974)
T ss_pred             ccCCcHHHH--HHHHHHHHH
Confidence            999999999  777766544

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=2.3e-21  Score=155.29  Aligned_cols=121  Identities=24%  Similarity=0.202  Sum_probs=99.5

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCccccc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      .+..|+|.||.|+|.   ++||||||||+|+|++.++.                      |.-|.+||+..+...+..+|
T Consensus       128 ~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd  204 (281)
T KOG0580|consen  128 TYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVD  204 (281)
T ss_pred             HHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhh
Confidence            467899999999999   99999999999999986653                      88999999999999999999


Q ss_pred             eechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCC
Q 022858           61 VRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPS  140 (291)
Q Consensus        61 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs  140 (291)
                      +|++|++.||++.|.+||......        ..++.+.+-.   +       ..+........+++.+|+..+|.+|..
T Consensus       205 ~w~lgvl~yeflvg~ppFes~~~~--------etYkrI~k~~---~-------~~p~~is~~a~dlI~~ll~~~p~~r~~  266 (281)
T KOG0580|consen  205 LWSLGVLCYEFLVGLPPFESQSHS--------ETYKRIRKVD---L-------KFPSTISGGAADLISRLLVKNPIERLA  266 (281)
T ss_pred             HHHHHHHHHHHHhcCCchhhhhhH--------HHHHHHHHcc---c-------cCCcccChhHHHHHHHHhccCcccccc
Confidence            999999999999999999866522        2333333221   1       112334467788999999999999999


Q ss_pred             CCcc
Q 022858          141 MTVR  144 (291)
Q Consensus       141 ~~~v  144 (291)
                      ..|+
T Consensus       267 l~~v  270 (281)
T KOG0580|consen  267 LTEV  270 (281)
T ss_pred             HHHH
Confidence            8888

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.82  E-value=1.4e-21  Score=171.74  Aligned_cols=147  Identities=18%  Similarity=0.200  Sum_probs=101.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCC-
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSF-   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~-   53 (291)
                      +.++.|++.||+|||+   .+|+|+||||+|||++.++.                           +..|+|||.+.+. 
T Consensus       106 ~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  182 (330)
T cd07834         106 QYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSS  182 (330)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeeccc
Confidence            4688999999999999   99999999999999997642                           4459999999887 


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHH-----------hhcCccchhhhh-c-----ccccch
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKK-----------LEKGEFQDLIIV-C-----GMEKNN  116 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~-~-----~~~~~~  116 (291)
                      .++.++|+||||+++|+|++|..||........    ...+...           .......+.+.. .     ......
T Consensus       183 ~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (330)
T cd07834         183 RYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ----LNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLF  258 (330)
T ss_pred             CCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH----HHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhc
Confidence            789999999999999999999999865542110    0000000           000001111110 0     000011


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcccc
Q 022858          117 KEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       117 ~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ......+.+++.+||+.+|++||++.++.....+++...
T Consensus       259 ~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         259 PGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD  297 (330)
T ss_pred             ccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence            123567889999999999999999999933334655444

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.82  E-value=5.2e-21  Score=164.09  Aligned_cols=123  Identities=21%  Similarity=0.195  Sum_probs=95.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||.|||+   .+++|+||||+||+++.++.                        +..|+|||.+.+..++.
T Consensus       104 ~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  180 (277)
T cd06641         104 ATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS  180 (277)
T ss_pred             HHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhccCCCCc
Confidence            4678999999999999   99999999999999986642                        55799999998888899


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|+||||+++|++++|..|+......       . ..........         ..........+.+++.+|++.+|++
T Consensus       181 ~~Dv~slG~~l~~l~~g~~p~~~~~~~-------~-~~~~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~~p~~  243 (277)
T cd06641         181 KADIWSLGITAIELAKGEPPHSELHPM-------K-VLFLIPKNNP---------PTLEGNYSKPLKEFVEACLNKEPSF  243 (277)
T ss_pred             hhhHHHHHHHHHHHHcCCCCCCccchH-------H-HHHHHhcCCC---------CCCCcccCHHHHHHHHHHccCChhh
Confidence            999999999999999999998643221       1 1111111111         1112233467888999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       244 Rp~~~~~  250 (277)
T cd06641         244 RPTAKEL  250 (277)
T ss_pred             CcCHHHH
Confidence            9999999

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.82  E-value=5e-21  Score=160.94  Aligned_cols=125  Identities=25%  Similarity=0.266  Sum_probs=95.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..++.|++.||.|||.   .+++|+||+|+||+++.++.                       +..|++||.+.+...+.+
T Consensus       101 ~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~  177 (253)
T cd05122         101 AYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYK  177 (253)
T ss_pred             HHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCCcccCHHHHcCCCCCcc
Confidence            4688999999999999   99999999999999986642                       457999999988888999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +||||||++++++++|+.|+......       .... ...........       ........+.+++.+|++.||++|
T Consensus       178 ~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~-~~~~~~~~~~~-------~~~~~~~~~~~~i~~~l~~~p~~R  242 (253)
T cd05122         178 ADIWSLGITAIELAEGKPPYSELPPM-------KALF-KIATNGPPGLR-------NPEKWSDEFKDFLKKCLQKNPEKR  242 (253)
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCCchH-------HHHH-HHHhcCCCCcC-------cccccCHHHHHHHHHHccCChhhC
Confidence            99999999999999999998654321       1111 11111111111       111124678899999999999999


Q ss_pred             CCCCcc
Q 022858          139 PSMTVR  144 (291)
Q Consensus       139 Ps~~~v  144 (291)
                      |++.++
T Consensus       243 ~t~~~~  248 (253)
T cd05122         243 PTAEQL  248 (253)
T ss_pred             CCHHHH
Confidence            999888

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=4.6e-21  Score=164.26  Aligned_cols=124  Identities=19%  Similarity=0.152  Sum_probs=93.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      +.++.|++.||.|||+   .+|+|+||+|+||+++.++.                        +..|+|||.+.++ .++
T Consensus       104 ~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  180 (277)
T cd06917         104 SVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYD  180 (277)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccc
Confidence            4688999999999999   99999999999999996543                        4569999988754 578


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++|+||||+++|+|++|..|+......       ... ..........     ...   ......+.+++.+|++.||+
T Consensus       181 ~~~Dv~slG~~l~~ll~g~~p~~~~~~~-------~~~-~~~~~~~~~~-----~~~---~~~~~~~~~~i~~~l~~~p~  244 (277)
T cd06917         181 TKADIWSLGITIYEMATGNPPYSDVDAF-------RAM-MLIPKSKPPR-----LED---NGYSKLLREFVAACLDEEPK  244 (277)
T ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCChh-------hhh-hccccCCCCC-----CCc---ccCCHHHHHHHHHHcCCCcc
Confidence            8999999999999999999998654321       000 0010000000     000   01346788999999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +||++.++
T Consensus       245 ~R~~~~~i  252 (277)
T cd06917         245 ERLSAEEL  252 (277)
T ss_pred             cCcCHHHH
Confidence            99999999

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.82  E-value=1.2e-21  Score=175.36  Aligned_cols=77  Identities=34%  Similarity=0.468  Sum_probs=69.0

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-------------------------------------------
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-------------------------------------------   39 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-------------------------------------------   39 (291)
                      .++.||+.||+|||+   .+|+||||||+|||++.++                                           
T Consensus       105 ~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (376)
T cd05598         105 FYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEID  181 (376)
T ss_pred             HHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccc
Confidence            467899999999999   9999999999999997542                                           


Q ss_pred             ------------------------CCCccccCccccCCCCccccceechhHHHHHHhhCCCcccccc
Q 022858           40 ------------------------WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        40 ------------------------~t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                                              +|+.|||||++.+..++.++|||||||++|||++|+.||....
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~  248 (376)
T cd05598         182 RCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADT  248 (376)
T ss_pred             cccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCC
Confidence                                    2567999999999899999999999999999999999997554

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=4.6e-21  Score=170.79  Aligned_cols=123  Identities=24%  Similarity=0.243  Sum_probs=97.1

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------CCccccCcccc---CCCCcccc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------TPGYAAPETWM---SFPVTHKC   59 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------t~~y~aPE~~~---~~~~~~~~   59 (291)
                      -|+.+.+.||+|||+   ++.||||||..||||++++.                    ||.|||||++.   .+.|+.++
T Consensus       130 Ai~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkv  206 (948)
T KOG0577|consen  130 AITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKV  206 (948)
T ss_pred             HHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCchhcccCCccccchhHheeccccccCCcc
Confidence            477899999999999   99999999999999997653                    99999999986   46899999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      ||||+||+++||..+++|.......       ..++.....       +++.  -...+-...+..++..|++.-|.+||
T Consensus       207 DvWSLGITCIELAERkPPlFnMNAM-------SALYHIAQN-------esPt--Lqs~eWS~~F~~Fvd~CLqKipqeRp  270 (948)
T KOG0577|consen  207 DVWSLGITCIELAERKPPLFNMNAM-------SALYHIAQN-------ESPT--LQSNEWSDYFRNFVDSCLQKIPQERP  270 (948)
T ss_pred             ceeeccchhhhhhhcCCCccCchHH-------HHHHHHHhc-------CCCC--CCCchhHHHHHHHHHHHHhhCcccCC
Confidence            9999999999999999997655432       111111111       1111  11345567788999999999999999


Q ss_pred             CCCcc
Q 022858          140 SMTVR  144 (291)
Q Consensus       140 s~~~v  144 (291)
                      |..++
T Consensus       271 tse~l  275 (948)
T KOG0577|consen  271 TSEEL  275 (948)
T ss_pred             cHHHH
Confidence            98887

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.82  E-value=5.7e-21  Score=164.06  Aligned_cols=125  Identities=19%  Similarity=0.166  Sum_probs=93.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCC-CCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSF-PVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~-~~~~~   58 (291)
                      ..|+.|++.||+|||+   .+|+||||||+||+++.++.                      +..|+|||.+.++ .++.+
T Consensus       100 ~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  176 (278)
T cd05606         100 RFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSS  176 (278)
T ss_pred             HHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcc
Confidence            4688999999999999   99999999999999986532                      6789999998754 68899


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +||||+|+++|||++|+.||........     ..........          ....+......+.+++.+|++.+|.+|
T Consensus       177 ~Di~s~G~~l~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~----------~~~~~~~~s~~~~~li~~~l~~~p~~R  241 (278)
T cd05606         177 ADWFSLGCMLFKLLRGHSPFRQHKTKDK-----HEIDRMTLTM----------AVELPDSFSPELRSLLEGLLQRDVNRR  241 (278)
T ss_pred             cchHhHHHHHHHHHhCCCCCCCCCccch-----HHHHHHhhcc----------CCCCCCcCCHHHHHHHHHHhhcCHHhc
Confidence            9999999999999999999875532110     0011111000          001111234678899999999999999


Q ss_pred             C-----CCCcc
Q 022858          139 P-----SMTVR  144 (291)
Q Consensus       139 P-----s~~~v  144 (291)
                      |     ++.++
T Consensus       242 ~~~~~~~~~~l  252 (278)
T cd05606         242 LGCLGRGAQEV  252 (278)
T ss_pred             cCCCCCCHHHH
Confidence            9     66566

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.82  E-value=4.5e-21  Score=182.63  Aligned_cols=124  Identities=28%  Similarity=0.363  Sum_probs=92.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------------------   40 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------------------   40 (291)
                      ++++.+|++||.|+|+   .+||||||||.||+||.+..                                         
T Consensus       700 wrLFreIlEGLaYIH~---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~V  776 (1351)
T KOG1035|consen  700 WRLFREILEGLAYIHD---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQV  776 (1351)
T ss_pred             HHHHHHHHHHHHHHHh---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCccccccc
Confidence            5789999999999999   99999999999999996543                                         


Q ss_pred             -CCccccCccccCC---CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccch
Q 022858           41 -TPGYAAPETWMSF---PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNN  116 (291)
Q Consensus        41 -t~~y~aPE~~~~~---~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (291)
                       |.-|+|||.+.+.   +|+.|+|+||+||+++||+..   |...-.       ...+...++.+.++.-      ....
T Consensus       777 GTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~TsME-------Ra~iL~~LR~g~iP~~------~~f~  840 (1351)
T KOG1035|consen  777 GTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP---FGTSME-------RASILTNLRKGSIPEP------ADFF  840 (1351)
T ss_pred             ceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc---CCchHH-------HHHHHHhcccCCCCCC------cccc
Confidence             7889999999864   599999999999999999854   321110       1112233334444332      0112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          117 KEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       117 ~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ......-..++.++++.||.+|||+.|+
T Consensus       841 ~~~~~~e~slI~~Ll~hdP~kRPtA~eL  868 (1351)
T KOG1035|consen  841 DPEHPEEASLIRWLLSHDPSKRPTATEL  868 (1351)
T ss_pred             cccchHHHHHHHHHhcCCCccCCCHHHH
Confidence            2233445778899999999999999988

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.82  E-value=4.2e-21  Score=167.32  Aligned_cols=140  Identities=19%  Similarity=0.234  Sum_probs=94.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.++.                        +..|+|||.+.+ ..++
T Consensus       111 ~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  187 (309)
T cd07845         111 KCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYT  187 (309)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcC
Confidence            4689999999999999   99999999999999986543                        456999999875 4678


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhH-------HHHHHhhcCcc-chhhhh-cccc---cchHHHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFK-------WVWKKLEKGEF-QDLIIV-CGME---KNNKEKAERMA  124 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~-------~~~~~~~~~~~-~~~~~~-~~~~---~~~~~~~~~~~  124 (291)
                      .++||||+|+++|||++|..||.............+       ..++....... .....+ ....   .........+.
T Consensus       188 ~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (309)
T cd07845         188 TAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGL  267 (309)
T ss_pred             chHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHH
Confidence            999999999999999999999875433210000000       00000000000 000000 0000   00011245678


Q ss_pred             HHHHHccccCCCCCCCCCcc
Q 022858          125 LVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       125 ~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +++.+|++.||++||++.++
T Consensus       268 ~li~~ml~~dp~~R~t~~~i  287 (309)
T cd07845         268 RLLNFLLMYDPKKRATAEEA  287 (309)
T ss_pred             HHHHHHhcCChhhCcCHHHH
Confidence            89999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.82  E-value=5e-21  Score=161.66  Aligned_cols=123  Identities=24%  Similarity=0.309  Sum_probs=96.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.+++.||+|||+   .+++|+||+|+||+++.+..                        ++.|+|||...+..++.
T Consensus       106 ~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~  182 (258)
T cd08215         106 LDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNY  182 (258)
T ss_pred             HHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhccCCCCc
Confidence            5788999999999999   89999999999999997432                        45699999988888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|+||+|++++++++|..|+......        ............         ..+......+.+++.+|+..+|++
T Consensus       183 ~~Dv~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~~p~~  245 (258)
T cd08215         183 KSDIWSLGCVLYELCTLKHPFEGENLL--------ELALKILKGQYP---------PIPSQYSSELRNLVSSLLQKDPEE  245 (258)
T ss_pred             cccHHHHHHHHHHHHcCCCCCCCCcHH--------HHHHHHhcCCCC---------CCCCCCCHHHHHHHHHHcCCChhh
Confidence            999999999999999999998644321        111112111111         111233467889999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       246 Rp~~~~l  252 (258)
T cd08215         246 RPSIAQI  252 (258)
T ss_pred             CcCHHHH
Confidence            9999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.82  E-value=6.8e-21  Score=162.76  Aligned_cols=128  Identities=21%  Similarity=0.252  Sum_probs=93.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCC-
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFP-   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~-   54 (291)
                      ..++.|++.||.|||+   .+++|+||+|+||+++.++.                          +..|+|||.+.... 
T Consensus       111 ~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~  187 (272)
T cd06629         111 RFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQ  187 (272)
T ss_pred             HHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccC
Confidence            3578999999999999   99999999999999985542                          45799999987654 


Q ss_pred             -CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 -VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 -~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                       ++.++|+||||+++||+++|..|+......       .......... ....+.    ..........+.+++.+|++.
T Consensus       188 ~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~li~~~l~~  255 (272)
T cd06629         188 GYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI-------AAMFKLGNKR-SAPPIP----PDVSMNLSPVALDFLNACFTI  255 (272)
T ss_pred             CCCccchhHHHHHHHHHHHhCCCCCcCcchH-------HHHHHhhccc-cCCcCC----ccccccCCHHHHHHHHHHhcC
Confidence             789999999999999999999998533211       1111111110 000000    111123457788899999999


Q ss_pred             CCCCCCCCCcc
Q 022858          134 KPEAMPSMTVR  144 (291)
Q Consensus       134 ~p~~RPs~~~v  144 (291)
                      +|++||++.++
T Consensus       256 ~p~~Rps~~~i  266 (272)
T cd06629         256 NPDNRPTAREL  266 (272)
T ss_pred             ChhhCCCHHHH
Confidence            99999999988

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.82  E-value=2.6e-21  Score=168.28  Aligned_cols=136  Identities=15%  Similarity=0.147  Sum_probs=92.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMSF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~~   53 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.++.                            +..|+|||.+.+.
T Consensus       122 ~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  198 (310)
T cd07865         122 KKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGE  198 (310)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCC
Confidence            5688999999999999   89999999999999986542                            3459999988664


Q ss_pred             -CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhh---cCccc-----hhhh----hcccccc-----
Q 022858           54 -PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLE---KGEFQ-----DLII----VCGMEKN-----  115 (291)
Q Consensus        54 -~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~----~~~~~~~-----  115 (291)
                       .++.++||||||+++|||++|..|+.......    ....+.....   .....     +..+    +......     
T Consensus       199 ~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  274 (310)
T cd07865         199 RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQH----QLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERL  274 (310)
T ss_pred             cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhc
Confidence             47889999999999999999999886543210    0010111000   00000     0000    0000000     


Q ss_pred             -hHHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          116 -NKEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       116 -~~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                       .......+.+++.+|++.||.+||++.++
T Consensus       275 ~~~~~~~~~~dli~~~l~~~P~~R~t~~e~  304 (310)
T cd07865         275 KPYVKDPHALDLIDKLLVLDPAKRIDADTA  304 (310)
T ss_pred             ccccCCHHHHHHHHHHhcCChhhccCHHHH
Confidence             00112456789999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.82  E-value=6.8e-21  Score=166.44  Aligned_cols=124  Identities=25%  Similarity=0.300  Sum_probs=93.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------CCccccCcccc---CCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------TPGYAAPETWM---SFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------t~~y~aPE~~~---~~~~~~~   58 (291)
                      +.++.|++.||.|||+   .+++|+||||+||+++.++.                    +..|+|||++.   ...++.+
T Consensus       124 ~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  200 (313)
T cd06633         124 AAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGK  200 (313)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccccccChhhccccCCCCCCch
Confidence            4578899999999999   99999999999999986543                    56799999974   3568889


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +||||||+++|||++|..|+......       ....... .......        ........+.+++.+|++.+|.+|
T Consensus       201 sDv~slGvil~el~~g~~p~~~~~~~-------~~~~~~~-~~~~~~~--------~~~~~~~~l~~li~~~l~~~P~~R  264 (313)
T cd06633         201 VDVWSLGITCIELAERKPPLFNMNAM-------SALYHIA-QNDSPTL--------QSNEWTDSFRGFVDYCLQKIPQER  264 (313)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHH-hcCCCCC--------CccccCHHHHHHHHHHccCChhhC
Confidence            99999999999999999998654321       1111111 1111111        111223567889999999999999


Q ss_pred             CCCCcc
Q 022858          139 PSMTVR  144 (291)
Q Consensus       139 Ps~~~v  144 (291)
                      |++.++
T Consensus       265 p~~~~~  270 (313)
T cd06633         265 PASAEL  270 (313)
T ss_pred             cCHHHH
Confidence            999999

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.82  E-value=8.2e-21  Score=165.24  Aligned_cols=136  Identities=19%  Similarity=0.208  Sum_probs=92.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------------CCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------------TPGYAA   46 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------------t~~y~a   46 (291)
                      ..++.|+++||+|||+   .+|+|+||||+||+++.++.                                   ++.|+|
T Consensus       118 ~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a  194 (311)
T cd07866         118 KCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRP  194 (311)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCC
Confidence            4688999999999999   99999999999999987643                                   234999


Q ss_pred             CccccCC-CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---------Cccchhh----h---h
Q 022858           47 PETWMSF-PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---------GEFQDLI----I---V  109 (291)
Q Consensus        47 PE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~----~---~  109 (291)
                      ||.+.+. .++.++||||||+++|||++|+.||.......    ....+......         ..+....    .   +
T Consensus       195 PE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (311)
T cd07866         195 PELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID----QLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYP  270 (311)
T ss_pred             hHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCChhhchhhhhcccccccccCCCCC
Confidence            9987654 57889999999999999999999986543221    00101100000         0000000    0   0


Q ss_pred             cccccchHHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          110 CGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       110 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .............+.+++.+|++.+|++||++.++
T Consensus       271 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~el  305 (311)
T cd07866         271 RTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDA  305 (311)
T ss_pred             ccHHHHcccCChhHHHHHHHHcccCcccCcCHHHH
Confidence            00000011223567899999999999999999887

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.82  E-value=1.1e-20  Score=163.22  Aligned_cols=134  Identities=16%  Similarity=0.219  Sum_probs=92.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ..++.|++.||+|||+   .+|+|+||||+||+++.++.                        ++.|+|||++.+. .++
T Consensus       106 ~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  182 (291)
T cd07870         106 RLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYS  182 (291)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCC
Confidence            3578899999999999   89999999999999986543                        5679999998753 578


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhh----------------cCccchhhhhccccc-----c
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLE----------------KGEFQDLIIVCGMEK-----N  115 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~-----~  115 (291)
                      .++||||||+++|||++|..||......      .+.+...+.                ...............     .
T Consensus       183 ~~~Dv~slG~~l~~l~~g~~~f~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (291)
T cd07870         183 SALDIWGAGCIFIEMLQGQPAFPGVSDV------FEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWK  256 (291)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCchhH------HHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhcc
Confidence            8999999999999999999998654321      011111000                000000000000000     0


Q ss_pred             hHHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          116 NKEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       116 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .......+.+++.+|++.||.+|||+.++
T Consensus       257 ~~~~~~~~~~ll~~~l~~dp~~R~t~~~~  285 (291)
T cd07870         257 RLSRPPKAEDLASQMLMMFPKDRISAQDA  285 (291)
T ss_pred             ccCCChHHHHHHHHHhCcCcccCcCHHHH
Confidence            00113567789999999999999999888

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.82  E-value=1.2e-20  Score=160.20  Aligned_cols=126  Identities=22%  Similarity=0.322  Sum_probs=93.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMSF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~~   53 (291)
                      ..|+.+++.||.|||+   .+++|+||+|+||+++.++.                            +..|++||++.+.
T Consensus       102 ~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~  178 (264)
T cd06626         102 RVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGG  178 (264)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCC
Confidence            4578999999999999   99999999999999986542                            3579999998876


Q ss_pred             C---CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHc
Q 022858           54 P---VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWR  130 (291)
Q Consensus        54 ~---~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c  130 (291)
                      .   ++.++||||||+++||+++|..||......      ...... ...+....       .+........+.+++.+|
T Consensus       179 ~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~------~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~li~~~  244 (264)
T cd06626         179 KGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE------FQIMFH-VGAGHKPP-------IPDSLQLSPEGKDFLDRC  244 (264)
T ss_pred             CCCCCCcccchHHHHHHHHHHHhCCCCccCCcch------HHHHHH-HhcCCCCC-------CCcccccCHHHHHHHHHH
Confidence            5   889999999999999999999998644211      111111 11111000       111112246677899999


Q ss_pred             cccCCCCCCCCCcc
Q 022858          131 VQYKPEAMPSMTVR  144 (291)
Q Consensus       131 l~~~p~~RPs~~~v  144 (291)
                      ++.+|++||++.++
T Consensus       245 l~~~p~~R~~~~~i  258 (264)
T cd06626         245 LESDPKKRPTASEL  258 (264)
T ss_pred             ccCCcccCCCHHHH
Confidence            99999999999988

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.82  E-value=4.5e-21  Score=164.81  Aligned_cols=136  Identities=17%  Similarity=0.136  Sum_probs=94.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccC-CCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMS-FPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~-~~~   55 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.++.                         +..|+|||.+.+ ..+
T Consensus       103 ~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  179 (287)
T cd07840         103 KCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRY  179 (287)
T ss_pred             HHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccC
Confidence            5789999999999999   89999999999999997643                         456999998765 467


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC---ccc---h-----hhhh-----cccccchHH-
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG---EFQ---D-----LIIV-----CGMEKNNKE-  118 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~-----~~~~-----~~~~~~~~~-  118 (291)
                      +.++||||||+++|||++|..||.......    ....+.......   ...   .     ...+     ......... 
T Consensus       180 ~~~~Dv~slG~~l~el~t~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (287)
T cd07840         180 GPEVDMWSVGCILAELFLGKPIFQGSTELE----QLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHL  255 (287)
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhccc
Confidence            899999999999999999999986544210    111111110000   000   0     0000     000000111 


Q ss_pred             HHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          119 KAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       119 ~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +...+.+++.+|++.+|++||++.++
T Consensus       256 ~~~~~~~~i~~~l~~~P~~Rp~~~~~  281 (287)
T cd07840         256 IDPSALDLLDKLLTLDPKKRISADQA  281 (287)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHH
Confidence            25678999999999999999999888

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.82  E-value=1.6e-21  Score=168.70  Aligned_cols=135  Identities=16%  Similarity=0.199  Sum_probs=92.1

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccC-CCCc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      .++.||+.||+|||+   ++++|+||||+||+++.+..                         ++.|+|||++.+ ..++
T Consensus       106 ~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  182 (294)
T PLN00009        106 TYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYS  182 (294)
T ss_pred             HHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCC
Confidence            578899999999999   99999999999999985321                         357999998866 3578


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC---------ccchhhh------hcccccchHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG---------EFQDLII------VCGMEKNNKEKAE  121 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~------~~~~~~~~~~~~~  121 (291)
                      .++||||||+++|+|+||..||........    ...........         .+.+...      +.......+....
T Consensus       183 ~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (294)
T PLN00009        183 TPVDIWSVGCIFAEMVNQKPLFPGDSEIDE----LFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEP  258 (294)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCCh
Confidence            899999999999999999999865432100    00000000000         0000000      0000000112345


Q ss_pred             HHHHHHHHccccCCCCCCCCCcc
Q 022858          122 RMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       122 ~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .+.+++.+|++.+|++||++.++
T Consensus       259 ~~~~~i~~~l~~~P~~Rps~~~~  281 (294)
T PLN00009        259 AGVDLLSKMLRLDPSKRITARAA  281 (294)
T ss_pred             HHHHHHHHHccCChhhCcCHHHH
Confidence            67889999999999999999998

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.82  E-value=3.7e-21  Score=172.70  Aligned_cols=77  Identities=34%  Similarity=0.472  Sum_probs=68.7

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-------------------------------------------
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-------------------------------------------   39 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-------------------------------------------   39 (291)
                      .++.||+.||+|||+   .+|+||||||+|||++.++                                           
T Consensus       105 ~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (382)
T cd05625         105 FYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPA  181 (382)
T ss_pred             HHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccc
Confidence            467899999999999   9999999999999997532                                           


Q ss_pred             ----------------------------CCCccccCccccCCCCccccceechhHHHHHHhhCCCcccccc
Q 022858           40 ----------------------------WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        40 ----------------------------~t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                                                  +|+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~  252 (382)
T cd05625         182 NCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQT  252 (382)
T ss_pred             cccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCC
Confidence                                        2457999999998899999999999999999999999997543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.82  E-value=5.3e-21  Score=161.83  Aligned_cols=124  Identities=21%  Similarity=0.223  Sum_probs=94.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCC-Ccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFP-VTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~-~~~   57 (291)
                      +.++.|++.||+|||+   .+++|+||+|+||+++.++.                       +..|++||.+.... ++.
T Consensus       105 ~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~  181 (258)
T cd06632         105 RLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGL  181 (258)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCc
Confidence            4578899999999999   99999999999999986543                       55699999987765 889


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|+||||+++|++++|..||.....       ..............         ..+......+.+++.+|++.+|++
T Consensus       182 ~~D~~slG~~l~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~  245 (258)
T cd06632         182 AADIWSLGCTVLEMATGKPPWSQLEG-------VAAVFKIGRSKELP---------PIPDHLSDEAKDFILKCLQRDPSL  245 (258)
T ss_pred             hhhhHHHHHHHHHHHhCCCCcccCcH-------HHHHHHHHhcccCC---------CcCCCcCHHHHHHHHHHhhcCccc
Confidence            99999999999999999999865431       11111111111111         111223467788999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       246 Rp~~~~~  252 (258)
T cd06632         246 RPTAAEL  252 (258)
T ss_pred             CcCHHHH
Confidence            9999888

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.82  E-value=1.2e-20  Score=168.68  Aligned_cols=123  Identities=20%  Similarity=0.272  Sum_probs=87.9

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCC----
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSF----   53 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~----   53 (291)
                      .++.||+.||+|||+   .+|+||||||+|||++.++.                         |+.|+|||++.+.    
T Consensus       146 ~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~  222 (371)
T cd05622         146 FYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDG  222 (371)
T ss_pred             HHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCc
Confidence            478899999999999   99999999999999986542                         6789999998753    


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc-CccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK-GEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      .++.++|||||||++|||++|..||......       . ....+.. ......       +........+.+++..|+.
T Consensus       223 ~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-------~-~~~~i~~~~~~~~~-------~~~~~~s~~~~~li~~~L~  287 (371)
T cd05622         223 YYGRECDWWSVGVFLYEMLVGDTPFYADSLV-------G-TYSKIMNHKNSLTF-------PDDNDISKEAKNLICAFLT  287 (371)
T ss_pred             cCCCccceeehhHHHHHHHhCCCCCCCCCHH-------H-HHHHHHcCCCcccC-------CCcCCCCHHHHHHHHHHcC
Confidence            3788999999999999999999999754321       1 1111111 100011       1112334567778888997


Q ss_pred             cCCCC---CCCCCcc
Q 022858          133 YKPEA---MPSMTVR  144 (291)
Q Consensus       133 ~~p~~---RPs~~~v  144 (291)
                       +|..   ||++.++
T Consensus       288 -~~~~r~~r~~~~ei  301 (371)
T cd05622         288 -DREVRLGRNGVEEI  301 (371)
T ss_pred             -ChhhhcCCCCHHHH
Confidence             5554   5666666

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=2.7e-21  Score=173.29  Aligned_cols=123  Identities=22%  Similarity=0.282  Sum_probs=88.8

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-------------------------------------------
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-------------------------------------------   39 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-------------------------------------------   39 (291)
                      .++.|++.||+|||+   .+|+||||||+|||++.++                                           
T Consensus       105 ~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (377)
T cd05629         105 FYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAV  181 (377)
T ss_pred             HHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeeccccccccccccccccccccccccccccccccccccc
Confidence            478899999999999   9999999999999996432                                           


Q ss_pred             ----------------------------CCCccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchh
Q 022858           40 ----------------------------WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGF   91 (291)
Q Consensus        40 ----------------------------~t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~   91 (291)
                                                  +|+.|+|||++.+..++.++|||||||++|||++|..||......       
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-------  254 (377)
T cd05629         182 DSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSH-------  254 (377)
T ss_pred             ccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHH-------
Confidence                                        255699999999888999999999999999999999999654321       


Q ss_pred             HHHHHHhhc-CccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC---CCCCcc
Q 022858           92 KWVWKKLEK-GEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM---PSMTVR  144 (291)
Q Consensus        92 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R---Ps~~~v  144 (291)
                      + ....+.. .....+       +........+.+++.+|+. +|.+|   +++.++
T Consensus       255 ~-~~~~i~~~~~~~~~-------p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~  302 (377)
T cd05629         255 E-TYRKIINWRETLYF-------PDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEI  302 (377)
T ss_pred             H-HHHHHHccCCccCC-------CCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHH
Confidence            1 1111111 000000       0111223567788888987 67765   577777

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.82  E-value=3.1e-21  Score=156.80  Aligned_cols=135  Identities=17%  Similarity=0.210  Sum_probs=99.3

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCcc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVTH   57 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~~   57 (291)
                      .++.++++||+|||+   +.|+||||||.|+|++.++.                        |.+|.|||.+.+. .|..
T Consensus       105 ~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~  181 (318)
T KOG0659|consen  105 SYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGT  181 (318)
T ss_pred             HHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCC
Confidence            578899999999999   99999999999999997764                        7899999999875 7999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhh---cCc------cchhh-----hhcccccchHHHHHHH
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLE---KGE------FQDLI-----IVCGMEKNNKEKAERM  123 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~~~-----~~~~~~~~~~~~~~~~  123 (291)
                      .+||||.||++.||+-|.+-|.+.+.-+.    ...+.....   ..+      +.+.+     ...........+....
T Consensus       182 ~VDmWavGCI~AELllr~P~fpG~sDidQ----L~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~  257 (318)
T KOG0659|consen  182 GVDMWAVGCIFAELLLRVPFFPGDSDIDQ----LSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDA  257 (318)
T ss_pred             cchhhhHHHHHHHHHccCCCCCCCchHHH----HHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHH
Confidence            99999999999999999888766543211    011111110   011      11111     1111222334556677


Q ss_pred             HHHHHHccccCCCCCCCCCcc
Q 022858          124 ALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       124 ~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ++++..++.+||.+|.++.|.
T Consensus       258 ldLl~~m~~ynP~~Rita~qa  278 (318)
T KOG0659|consen  258 LDLLSKMLTYNPKKRITASQA  278 (318)
T ss_pred             HHHHHhhhccCchhcccHHHH
Confidence            999999999999999999998

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.82  E-value=1.6e-20  Score=175.58  Aligned_cols=141  Identities=18%  Similarity=0.149  Sum_probs=86.5

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCC---
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSF---   53 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~---   53 (291)
                      .|+.|++.||+|||+   .+|+||||||+|||++.+..                          ++.|||||.+...   
T Consensus       259 ~i~~qll~aL~yLH~---~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~  335 (566)
T PLN03225        259 TIMRQILFALDGLHS---TGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQT  335 (566)
T ss_pred             HHHHHHHHHHHHHHH---CCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCC
Confidence            588999999999999   99999999999999985321                          5689999965422   


Q ss_pred             -------------------CCccccceechhHHHHHHhhCCCcccccccc------CCCCchhHHHHHHhhcCccchhhh
Q 022858           54 -------------------PVTHKCDVRSFGMLLFEILGRRRMRTCQKAR------SGFPSGFKWVWKKLEKGEFQDLII  108 (291)
Q Consensus        54 -------------------~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~  108 (291)
                                         .++.++|||||||++|||+++..+.+.....      ........|... .......+.. 
T Consensus       336 ~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~-  413 (566)
T PLN03225        336 PSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKL-VEPRASPDLR-  413 (566)
T ss_pred             CCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHh-hccccchhhh-
Confidence                               2345679999999999999876654322100      000001111000 0000000000 


Q ss_pred             hcccccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhh
Q 022858          109 VCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFML  150 (291)
Q Consensus       109 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L  150 (291)
                      .  .............+|+.+|++.||++|||+.+++....+
T Consensus       414 ~--~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff  453 (566)
T PLN03225        414 R--GFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYF  453 (566)
T ss_pred             h--hhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCc
Confidence            0  000000011234589999999999999999999333334

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.82  E-value=7.5e-21  Score=163.44  Aligned_cols=139  Identities=17%  Similarity=0.243  Sum_probs=94.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ++++.|++.||+|||+   .+++||||||+||+++.++.                        +..|++||++.+. .++
T Consensus       103 ~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  179 (284)
T cd07836         103 KSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYS  179 (284)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCC
Confidence            4688999999999999   99999999999999986542                        5679999988664 568


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHH-------HHHHhhc-----CccchhhhhcccccchHHHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKW-------VWKKLEK-----GEFQDLIIVCGMEKNNKEKAERMA  124 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~-------~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  124 (291)
                      .++||||||+++||+++|..||.............+.       .++.+..     .......+. ......+.....+.
T Consensus       180 ~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  258 (284)
T cd07836         180 TSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQ-DLQQLFPHADPLGI  258 (284)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChH-HHHHHhhhcCcHHH
Confidence            8999999999999999999998654322100000000       0000000     000000000 00011123346778


Q ss_pred             HHHHHccccCCCCCCCCCcc
Q 022858          125 LVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       125 ~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +++.+|++.||++||++.++
T Consensus       259 ~~i~~~l~~~p~~R~~~~~~  278 (284)
T cd07836         259 DLLHRLLQLNPELRISAHDA  278 (284)
T ss_pred             HHHHHHhcCCcccCCCHHHH
Confidence            99999999999999999888

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.82  E-value=1.7e-20  Score=161.19  Aligned_cols=140  Identities=15%  Similarity=0.200  Sum_probs=93.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccC-CCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMS-FPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~-~~~~~   57 (291)
                      +.++.|++.||.|||+   .+++|+||+|+||+++.++.                       +..|+|||++.+ ..++.
T Consensus       102 ~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  178 (283)
T cd07830         102 RSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSS  178 (283)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCC
Confidence            5688999999999999   99999999999999997543                       556999998754 45789


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCC---------chhHHHHHHhhcCccchhhhh---cccccchHHHHHHHHH
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFP---------SGFKWVWKKLEKGEFQDLIIV---CGMEKNNKEKAERMAL  125 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  125 (291)
                      ++|+||||++++||++|+.||..........         .-..|.............+..   .............+.+
T Consensus       179 ~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (283)
T cd07830         179 PVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAID  258 (283)
T ss_pred             ccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHH
Confidence            9999999999999999999886543211000         000000000000000000000   0000001111467889


Q ss_pred             HHHHccccCCCCCCCCCcc
Q 022858          126 VALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v  144 (291)
                      ++.+|++.+|++||++.|+
T Consensus       259 li~~cl~~~p~~Rpt~~ei  277 (283)
T cd07830         259 LIKDMLRWDPKKRPTASQA  277 (283)
T ss_pred             HHHHhcccCcccCCCHHHH
Confidence            9999999999999999888

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.81  E-value=8.4e-21  Score=167.49  Aligned_cols=148  Identities=16%  Similarity=0.147  Sum_probs=96.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------CCccccCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------TPGYAAPETWMS   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------t~~y~aPE~~~~   52 (291)
                      ..++.|++.||+|||+   ++|+||||||+||+++.++.                             +..|+|||.+.+
T Consensus       110 ~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  186 (337)
T cd07852         110 RYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLG  186 (337)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeec
Confidence            3588999999999999   99999999999999987653                             346999998765


Q ss_pred             -CCCccccceechhHHHHHHhhCCCccccccccCCCCchhH-------HHHHHhhcCccchhhhh------cccccchHH
Q 022858           53 -FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFK-------WVWKKLEKGEFQDLIIV------CGMEKNNKE  118 (291)
Q Consensus        53 -~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~------~~~~~~~~~  118 (291)
                       ..++.++||||||+++|||++|+.||..............       .....+.......+++.      .......+.
T Consensus       187 ~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (337)
T cd07852         187 STRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPK  266 (337)
T ss_pred             cccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccC
Confidence             4678899999999999999999999864432100000000       00000000000000000      000011112


Q ss_pred             HHHHHHHHHHHccccCCCCCCCCCccchhhhhhc
Q 022858          119 KAERMALVALWRVQYKPEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       119 ~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~  152 (291)
                      ....+.+++.+|++.+|++||++.++.....+..
T Consensus       267 ~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~  300 (337)
T cd07852         267 ASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ  300 (337)
T ss_pred             CCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence            3567889999999999999999999932233443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.81  E-value=9.8e-21  Score=162.41  Aligned_cols=125  Identities=22%  Similarity=0.222  Sum_probs=94.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.++.|++.||.|||+   .+++|+||+|+||+++.++.                       +..|++||++.+..++.+
T Consensus        98 ~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~  174 (277)
T cd05577          98 IFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFS  174 (277)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCch
Confidence            4678999999999999   99999999999999987543                       457999999988889999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +||||||+++|+|++|+.||........    ...+......          .....+......+.+++.+||+.+|++|
T Consensus       175 ~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~R  240 (277)
T cd05577         175 VDWFALGCTLYEMIAGRSPFRQRKEKVE----KEELKRRTLE----------MAVEYPDKFSPEAKDLCEALLQKDPEKR  240 (277)
T ss_pred             hhhHHHHHHHHHHhhCCCCCCCCccccc----HHHHHhcccc----------ccccCCccCCHHHHHHHHHHccCChhHc
Confidence            9999999999999999999865443110    1111111100          0011122235678899999999999999


Q ss_pred             CCCCc
Q 022858          139 PSMTV  143 (291)
Q Consensus       139 Ps~~~  143 (291)
                      |+..+
T Consensus       241 ~~~~~  245 (277)
T cd05577         241 LGCRG  245 (277)
T ss_pred             cCCCc
Confidence            98777

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.81  E-value=8.1e-21  Score=161.42  Aligned_cols=125  Identities=24%  Similarity=0.299  Sum_probs=94.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..++.|++.||+|||+   .+++|+||||+||+++.++.                       +..|++||.+.+..++.+
T Consensus        96 ~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~  172 (262)
T cd05572          96 RFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFS  172 (262)
T ss_pred             HHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCCh
Confidence            4578899999999999   99999999999999986543                       557999999888888999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|+||+|+++|++++|..|+......     ... .......+        ......+......+.+++.+||+.+|++|
T Consensus       173 ~Di~slG~il~~l~~g~~p~~~~~~~-----~~~-~~~~~~~~--------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  238 (262)
T cd05572         173 VDYWSLGILLYELLTGRPPFGEDDED-----PME-IYNDILKG--------NGKLEFPNYIDKAAKDLIKQLLRRNPEER  238 (262)
T ss_pred             hhhhhhHHHHHHHHhCCCCcCCCCCC-----HHH-HHHHHhcc--------CCCCCCCcccCHHHHHHHHHHccCChhhC
Confidence            99999999999999999998755421     011 11111110        00111122225688999999999999999


Q ss_pred             CCCCc
Q 022858          139 PSMTV  143 (291)
Q Consensus       139 Ps~~~  143 (291)
                      |++.+
T Consensus       239 ~~~~~  243 (262)
T cd05572         239 LGNLK  243 (262)
T ss_pred             cCCcc
Confidence            99543

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.81  E-value=1.6e-20  Score=167.51  Aligned_cols=78  Identities=35%  Similarity=0.500  Sum_probs=69.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC------------------------------------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------------------------   39 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~------------------------------------------   39 (291)
                      ..++.|++.||+|||+   ++|+||||||+|||++.++                                          
T Consensus       104 ~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (363)
T cd05628         104 QFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKR  180 (363)
T ss_pred             HHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccccccccccccccccccccccc
Confidence            4578999999999999   9999999999999997542                                          


Q ss_pred             -----------------CCCccccCccccCCCCccccceechhHHHHHHhhCCCcccccc
Q 022858           40 -----------------WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        40 -----------------~t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                                       +|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       181 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~  240 (363)
T cd05628         181 KAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET  240 (363)
T ss_pred             ccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC
Confidence                             1457999999998899999999999999999999999997543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.81  E-value=3.5e-21  Score=169.99  Aligned_cols=145  Identities=19%  Similarity=0.223  Sum_probs=98.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      ..++.|++.||.|||+   ++++||||||+||+++.++.                        +..|+|||.+.. ..++
T Consensus       111 ~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  187 (337)
T cd07858         111 QYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYT  187 (337)
T ss_pred             HHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCC
Confidence            4688999999999999   99999999999999986542                        456999998865 4688


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHH-----------HhhcCccchhhhh--c----ccccchHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWK-----------KLEKGEFQDLIIV--C----GMEKNNKEK  119 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~--~----~~~~~~~~~  119 (291)
                      .++||||||+++|+|++|+.||.......    .......           ..........+..  .    .........
T Consensus       188 ~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (337)
T cd07858         188 TAIDVWSVGCIFAELLGRKPLFPGKDYVH----QLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHA  263 (337)
T ss_pred             CcccHHHHHHHHHHHHcCCCCCCCCChHH----HHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccC
Confidence            99999999999999999999986442110    0000000           0000000000000  0    000011234


Q ss_pred             HHHHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          120 AERMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       120 ~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      ...+.+++.+|++.+|++||++.++.....+...
T Consensus       264 ~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         264 NPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             CHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence            5678899999999999999999999333335443

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.81  E-value=1.1e-20  Score=160.33  Aligned_cols=129  Identities=22%  Similarity=0.270  Sum_probs=97.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------------CCccccCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------------TPGYAAPET   49 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------------t~~y~aPE~   49 (291)
                      ++++.|++.||+|||+   .+++|+||+|+||+++.+..                                +..|++||.
T Consensus        96 ~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~  172 (265)
T cd05579          96 RIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEV  172 (265)
T ss_pred             HHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHH
Confidence            5689999999999999   99999999999999986543                                346999999


Q ss_pred             ccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHH
Q 022858           50 WMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALW  129 (291)
Q Consensus        50 ~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  129 (291)
                      ......+.++||||||+++||+++|..||......        ........+...        .+........+.+++.+
T Consensus       173 ~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~--------~~~~~~~~~~~~~~i~~  236 (265)
T cd05579         173 ILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE--------EIFQNILNGKIE--------WPEDVEVSDEAIDLISK  236 (265)
T ss_pred             hcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCCcC--------CCccccCCHHHHHHHHH
Confidence            98888899999999999999999999998644321        111111111110        00011125778899999


Q ss_pred             ccccCCCCCCCCCccchhhhhh
Q 022858          130 RVQYKPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       130 cl~~~p~~RPs~~~v~~~~~L~  151 (291)
                      |++.+|++||++..+  .+.|+
T Consensus       237 ~l~~~p~~Rpt~~~~--~~~l~  256 (265)
T cd05579         237 LLVPDPEKRLGAKSI--EEIKN  256 (265)
T ss_pred             HhcCCHhhcCCCccH--HHHhc
Confidence            999999999999766  54443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.81  E-value=8.3e-21  Score=160.27  Aligned_cols=125  Identities=21%  Similarity=0.200  Sum_probs=96.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+++|+||+|+||+++.++.                          +..|++||...+...
T Consensus       104 ~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~  180 (260)
T cd06606         104 RKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEY  180 (260)
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCC
Confidence            5688999999999999   99999999999999997543                          447999999988889


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||||++++++++|..|+.....      ............         .....+......+.+++.+|++.+|
T Consensus       181 ~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~i~~~l~~~p  245 (260)
T cd06606         181 GRAADIWSLGCTVIEMATGKPPWSELGN------PMAALYKIGSSG---------EPPEIPEHLSEEAKDFLRKCLRRDP  245 (260)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCc------hHHHHHhccccC---------CCcCCCcccCHHHHHHHHHhCcCCh
Confidence            9999999999999999999999865441      111111111101         1111222335788999999999999


Q ss_pred             CCCCCCCcc
Q 022858          136 EAMPSMTVR  144 (291)
Q Consensus       136 ~~RPs~~~v  144 (291)
                      ++||++.++
T Consensus       246 ~~Rp~~~~l  254 (260)
T cd06606         246 KKRPTADEL  254 (260)
T ss_pred             hhCCCHHHH
Confidence            999999988

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.81  E-value=1.1e-20  Score=160.35  Aligned_cols=123  Identities=21%  Similarity=0.280  Sum_probs=94.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.++.|++.||.|||+   .+++|+||||+||+++.+..                       +..|+|||...+..++.+
T Consensus       109 ~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~  185 (260)
T cd08222         109 CEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSK  185 (260)
T ss_pred             HHHHHHHHHHHHHHHH---cCccccCCChhheEeecCCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCch
Confidence            4678999999999999   99999999999999984321                       557999999888888899


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|+||||+++|+|++|..|+.....       .. .......+..         ...+......+.+++.+|++.+|++|
T Consensus       186 ~Dv~slG~~~~~l~~~~~~~~~~~~-------~~-~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~R  248 (260)
T cd08222         186 SDIWSLGCILYEMCCLAHAFEGQNF-------LS-VVLRIVEGPT---------PSLPETYSRQLNSIMQSMLNKDPSLR  248 (260)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCccH-------HH-HHHHHHcCCC---------CCCcchhcHHHHHHHHHHhcCChhhC
Confidence            9999999999999999999853321       11 1111111111         11223445678899999999999999


Q ss_pred             CCCCcc
Q 022858          139 PSMTVR  144 (291)
Q Consensus       139 Ps~~~v  144 (291)
                      |++.++
T Consensus       249 p~~~~i  254 (260)
T cd08222         249 PSAAEI  254 (260)
T ss_pred             cCHHHH
Confidence            999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.81  E-value=5e-21  Score=183.29  Aligned_cols=121  Identities=23%  Similarity=0.297  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccCCC-
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMSFP-   54 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~~~-   54 (291)
                      +..|++.||+|||+   .+||||||||.||+|+.++.                            |+.|||||++.+.+ 
T Consensus      1339 yt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~ 1415 (1509)
T KOG4645|consen 1339 YTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKG 1415 (1509)
T ss_pred             HHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhccccc
Confidence            45799999999999   99999999999999996643                            99999999998643 


Q ss_pred             --CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHH-HhhcCccchhhhhcccccchHHHHHHHHHHHHHcc
Q 022858           55 --VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWK-KLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRV  131 (291)
Q Consensus        55 --~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  131 (291)
                        ...+.||||+|||++||.||++|+......        |..- .+..|..         .+.+......-.+++.+|+
T Consensus      1416 kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne--------~aIMy~V~~gh~---------Pq~P~~ls~~g~dFle~Cl 1478 (1509)
T KOG4645|consen 1416 KGHGGAADIWSLGCVVLEMATGKRPWAELDNE--------WAIMYHVAAGHK---------PQIPERLSSEGRDFLEHCL 1478 (1509)
T ss_pred             CCCCcchhhhcccceEEEeecCCCchhhccch--------hHHHhHHhccCC---------CCCchhhhHhHHHHHHHHH
Confidence              446789999999999999999998766543        2111 1122222         2223335566778899999


Q ss_pred             ccCCCCCCCCCcc
Q 022858          132 QYKPEAMPSMTVR  144 (291)
Q Consensus       132 ~~~p~~RPs~~~v  144 (291)
                      +.||++|.++.|+
T Consensus      1479 ~~dP~~Rw~~~ql 1491 (1509)
T KOG4645|consen 1479 EQDPKMRWTASQL 1491 (1509)
T ss_pred             hcCchhhhHHHHH
Confidence            9999999888777

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.81  E-value=5.8e-21  Score=172.94  Aligned_cols=122  Identities=17%  Similarity=0.215  Sum_probs=102.9

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccC-------CC--------------------CCccccCccccCCCC
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK-------FW--------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~-------~~--------------------t~~y~aPE~~~~~~~   55 (291)
                      .++.|||.||.||.+   +++|||||-.+|+||...       ++                    .+.|+|||.+...++
T Consensus       216 dya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kF  292 (1039)
T KOG0199|consen  216 DYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKF  292 (1039)
T ss_pred             HHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccc
Confidence            578999999999999   999999999999999643       11                    778999999999999


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||+|||++|||+| |..|+.+....                 .+.+.+|.+...+.++.|++.+.++++.||..+
T Consensus       293 ShaSDvWmyGVTiWEMFtyGEePW~G~~g~-----------------qIL~~iD~~erLpRPk~csedIY~imk~cWah~  355 (1039)
T KOG0199|consen  293 SHASDVWMYGVTIWEMFTYGEEPWVGCRGI-----------------QILKNIDAGERLPRPKYCSEDIYQIMKNCWAHN  355 (1039)
T ss_pred             cccchhhhhhhhHHhhhccCCCCCCCCCHH-----------------HHHHhccccccCCCCCCChHHHHHHHHHhccCC
Confidence            999999999999999996 66676544322                 233444555556677889999999999999999


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |.+||++..|
T Consensus       356 paDRptFsai  365 (1039)
T KOG0199|consen  356 PADRPTFSAI  365 (1039)
T ss_pred             ccccccHHHH
Confidence            9999999988

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.81  E-value=5.1e-21  Score=164.17  Aligned_cols=139  Identities=21%  Similarity=0.246  Sum_probs=95.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      +.++.|++.||+|||+   .+|+|+||+|+||+++.++.                        +..|+|||.+.+. .++
T Consensus       101 ~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  177 (282)
T cd07829         101 KSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYS  177 (282)
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCC
Confidence            5688999999999999   99999999999999987543                        4569999998766 788


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchh-------HHHHHHhhc-----CccchhhhhcccccchHHHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGF-------KWVWKKLEK-----GEFQDLIIVCGMEKNNKEKAERMA  124 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~-------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  124 (291)
                      .++||||||+++||+++|..||.............       ...+.....     ....... ........+.....+.
T Consensus       178 ~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  256 (282)
T cd07829         178 TAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFP-PKDLEKVLPRLDPEGI  256 (282)
T ss_pred             ccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccC-ccchHHhcccccHHHH
Confidence            99999999999999999999886543210000000       000000000     0000000 0000001112246789


Q ss_pred             HHHHHccccCCCCCCCCCcc
Q 022858          125 LVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       125 ~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +++..|++.+|++||++.++
T Consensus       257 ~~i~~~l~~~P~~Rp~~~~~  276 (282)
T cd07829         257 DLLSKMLQYNPAKRISAKEA  276 (282)
T ss_pred             HHHHHhhccCcccCCCHHHH
Confidence            99999999999999999888

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.81  E-value=2.4e-20  Score=158.10  Aligned_cols=125  Identities=23%  Similarity=0.191  Sum_probs=96.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..|+.|+++||.|||+   .+++|+||||+||+++.++.                       +..|+|||.+.+..++.+
T Consensus       103 ~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~  179 (258)
T cd05578         103 KFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVA  179 (258)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCc
Confidence            4688999999999999   99999999999999986643                       557999999988889999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|+||||+++|++++|..|+......     ...+.......          .....+...+..+.+++.+||+.+|.+|
T Consensus       180 ~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~~p~~R  244 (258)
T cd05578         180 VDWWSLGVTAYECLRGKRPYRGHSRT-----IRDQIRAKQET----------ADVLYPATWSTEAIDAINKLLERDPQKR  244 (258)
T ss_pred             ccchhhHHHHHHHHhCCCCCCCCCcc-----HHHHHHHHhcc----------ccccCcccCcHHHHHHHHHHccCChhHc
Confidence            99999999999999999998755431     11222211111          0011122334788899999999999999


Q ss_pred             CCC--Ccc
Q 022858          139 PSM--TVR  144 (291)
Q Consensus       139 Ps~--~~v  144 (291)
                      |++  .|+
T Consensus       245 ~~~~~~~l  252 (258)
T cd05578         245 LGDNLKDL  252 (258)
T ss_pred             CCccHHHH
Confidence            999  665

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.81  E-value=6.2e-21  Score=165.47  Aligned_cols=136  Identities=18%  Similarity=0.146  Sum_probs=93.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCC-CC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSF-PV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~-~~   55 (291)
                      +.++.|++.||+|||+   .+|+|+||||+||+++.++.                         +..|+|||++.+. .+
T Consensus       119 ~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  195 (302)
T cd07864         119 KSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERY  195 (302)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCC
Confidence            5688999999999999   99999999999999987542                         3459999988653 57


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC---ccchhh--------hhcc-----cccchHHH
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG---EFQDLI--------IVCG-----MEKNNKEK  119 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------~~~~-----~~~~~~~~  119 (291)
                      +.++|||||||++|||++|+.||.......    ....+.......   .+..+.        +...     ........
T Consensus       196 ~~~~Di~slG~~~~el~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (302)
T cd07864         196 GPAIDVWSCGCILGELFTKKPIFQANQELA----QLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFI  271 (302)
T ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCC
Confidence            889999999999999999999986443210    111111110000   000000        0000     00001113


Q ss_pred             HHHHHHHHHHccccCCCCCCCCCcc
Q 022858          120 AERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       120 ~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +..+.+++..||+.+|++||++.++
T Consensus       272 ~~~~~~li~~~l~~~P~~Rp~~~~i  296 (302)
T cd07864         272 PTPALDLLDHMLTLDPSKRCTAEEA  296 (302)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHH
Confidence            4678999999999999999999888

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.81  E-value=1.3e-20  Score=163.23  Aligned_cols=123  Identities=25%  Similarity=0.244  Sum_probs=93.4

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCcccc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      -++.+|+.||++||.   ..||.||+||+|||||+++.                       |.+|||||++.++.|+...
T Consensus       291 FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~  367 (591)
T KOG0986|consen  291 FYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSP  367 (591)
T ss_pred             HHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCc
Confidence            367899999999999   99999999999999998765                       9999999999999999999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      |-||+||++|||+.|+.||.......    -.+.+.+....       ++   ..++.........+....|+.||.+|-
T Consensus       368 Dwf~lGCllYemi~G~sPFr~~KeKv----k~eEvdrr~~~-------~~---~ey~~kFS~eakslc~~LL~Kdp~~RL  433 (591)
T KOG0986|consen  368 DWFSLGCLLYEMIAGHSPFRQRKEKV----KREEVDRRTLE-------DP---EEYSDKFSEEAKSLCEGLLTKDPEKRL  433 (591)
T ss_pred             cHHHHHhHHHHHHcccCchhhhhhhh----hHHHHHHHHhc-------ch---hhcccccCHHHHHHHHHHHccCHHHhc
Confidence            99999999999999999997665321    01111111111       11   122233345555566677899999997


Q ss_pred             CCC
Q 022858          140 SMT  142 (291)
Q Consensus       140 s~~  142 (291)
                      ...
T Consensus       434 Gcr  436 (591)
T KOG0986|consen  434 GCR  436 (591)
T ss_pred             cCC
Confidence            654

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.81  E-value=1.1e-20  Score=163.42  Aligned_cols=125  Identities=20%  Similarity=0.257  Sum_probs=94.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||+|||+   .+++|+||||+||+++.++.                        ++.|++||.+.+..++.
T Consensus       119 ~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~  195 (292)
T cd06657         119 AAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGP  195 (292)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHHHhcCCCCCc
Confidence            4688999999999999   99999999999999987643                        45699999988888899


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|+||||+++|||++|..||......       . ....... .....      ..........+.+++.+|++.+|.+
T Consensus       196 ~~Dv~slGvil~el~tg~~p~~~~~~~-------~-~~~~~~~-~~~~~------~~~~~~~~~~l~~li~~~l~~~P~~  260 (292)
T cd06657         196 EVDIWSLGIMVIEMVDGEPPYFNEPPL-------K-AMKMIRD-NLPPK------LKNLHKVSPSLKGFLDRLLVRDPAQ  260 (292)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHH-------H-HHHHHHh-hCCcc------cCCcccCCHHHHHHHHHHHhCCccc
Confidence            999999999999999999998643211       1 0111111 00000      0001122356788899999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       261 R~~~~~l  267 (292)
T cd06657         261 RATAAEL  267 (292)
T ss_pred             CcCHHHH
Confidence            9999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.81  E-value=4.9e-21  Score=162.68  Aligned_cols=140  Identities=19%  Similarity=0.269  Sum_probs=100.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------------------   40 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------------------   40 (291)
                      ..|+.|++++++|||+   .+++|.||||+|||+..+..                                         
T Consensus       195 r~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVs  271 (415)
T KOG0671|consen  195 RHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVS  271 (415)
T ss_pred             HHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCcceeee
Confidence            4688999999999999   99999999999999853211                                         


Q ss_pred             CCccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCC-------CchhHH------HHHHhhcCc-----
Q 022858           41 TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGF-------PSGFKW------VWKKLEKGE-----  102 (291)
Q Consensus        41 t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~-------~~~~~~------~~~~~~~~~-----  102 (291)
                      |-.|.|||++.+-.++..+||||+||||.|+.||...|....+.+..       -.+...      ..+....+.     
T Consensus       272 TRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e  351 (415)
T KOG0671|consen  272 TRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPE  351 (415)
T ss_pred             ccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCcc
Confidence            88899999999999999999999999999999999988766633210       000000      001111111     


Q ss_pred             ------cchhhhhccc----ccchHHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          103 ------FQDLIIVCGM----EKNNKEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       103 ------~~~~~~~~~~----~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                            ...+.+++..    ......+...+++|+.+++..||.+|+|+.|+
T Consensus       352 ~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EA  403 (415)
T KOG0671|consen  352 VSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREA  403 (415)
T ss_pred             ccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHH
Confidence                  1111111111    11233456789999999999999999999998

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.81  E-value=5.7e-21  Score=170.11  Aligned_cols=78  Identities=33%  Similarity=0.500  Sum_probs=69.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC------------------------------------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------------------------   39 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~------------------------------------------   39 (291)
                      ..++.|++.||+|||+   ++|+||||||+|||++.++                                          
T Consensus       104 ~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (360)
T cd05627         104 QFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKR  180 (360)
T ss_pred             HHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCccccccccccccc
Confidence            3578999999999999   9999999999999997542                                          


Q ss_pred             -----------------CCCccccCccccCCCCccccceechhHHHHHHhhCCCcccccc
Q 022858           40 -----------------WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        40 -----------------~t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                                       +|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       181 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~  240 (360)
T cd05627         181 KAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET  240 (360)
T ss_pred             ccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC
Confidence                             2467999999999899999999999999999999999997554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.81  E-value=2.2e-20  Score=161.06  Aligned_cols=133  Identities=21%  Similarity=0.159  Sum_probs=96.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCC--
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFP--   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~--   54 (291)
                      ..++.|++.||+|||+   .+++|+||||+||+++.+..                         +..|++||.+.+..  
T Consensus       108 ~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  184 (288)
T cd05583         108 RVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGG  184 (288)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCC
Confidence            4578899999999999   99999999999999986532                         55799999987654  


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      .+.++||||||+++|||++|..|+......    .......+......          ...+......+.+++.+|++.+
T Consensus       185 ~~~~~Dv~slG~il~el~tg~~p~~~~~~~----~~~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~~  250 (288)
T cd05583         185 HDKAVDWWSLGVLTFELLTGASPFTVDGEQ----NSQSEISRRILKSK----------PPFPKTMSAEARDFIQKLLEKD  250 (288)
T ss_pred             CcchhhhHHHHHHHHHHHhCCCCcccCccc----chHHHHHHHHHccC----------CCCCcccCHHHHHHHHHHhcCC
Confidence            788999999999999999999998543211    11111111111110          1111223456788999999999


Q ss_pred             CCCCCCCCccchhhhhhcc
Q 022858          135 PEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~  153 (291)
                      |++|||+.++  ...|+..
T Consensus       251 p~~R~t~~~~--~~~l~~~  267 (288)
T cd05583         251 PKKRLGANGA--DEIKNHP  267 (288)
T ss_pred             HhhccCcchH--HHHhcCc
Confidence            9999999888  6655543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=1.5e-20  Score=158.63  Aligned_cols=123  Identities=20%  Similarity=0.226  Sum_probs=94.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||.|||+   .+|+|+||||+||+++.++.                        +..|+|||...+..++.
T Consensus       102 ~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~  178 (254)
T cd06627         102 AVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGAST  178 (254)
T ss_pred             HHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCc
Confidence            4688999999999999   99999999999999997542                        55799999988777889


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||++|+++|++++|..|+......       ....... .....         ..+......+.+++.+|++.+|++
T Consensus       179 ~~Dv~~lG~~l~~l~~g~~p~~~~~~~-------~~~~~~~-~~~~~---------~~~~~~~~~~~~~i~~~l~~~p~~  241 (254)
T cd06627         179 ASDIWSLGCTVIELLTGNPPYYDLNPM-------AALFRIV-QDDHP---------PLPEGISPELKDFLMQCFQKDPNL  241 (254)
T ss_pred             chhHHHHHHHHHHHHhCCCCCCCccHH-------HHHHHHh-ccCCC---------CCCCCCCHHHHHHHHHHHhCChhh
Confidence            999999999999999999998643311       1111111 11111         111223467789999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       242 R~~~~~~  248 (254)
T cd06627         242 RPTAKQL  248 (254)
T ss_pred             CcCHHHH
Confidence            9999888

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.80  E-value=3.9e-20  Score=162.94  Aligned_cols=78  Identities=28%  Similarity=0.425  Sum_probs=68.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCcccc-----
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWM-----   51 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~-----   51 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                         |+.|+|||++.     
T Consensus       105 ~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  181 (332)
T cd05623         105 RFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDG  181 (332)
T ss_pred             HHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccC
Confidence            3578899999999999   99999999999999985532                         67899999886     


Q ss_pred             CCCCccccceechhHHHHHHhhCCCcccccc
Q 022858           52 SFPVTHKCDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        52 ~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                      ...++.++|||||||++|||++|+.||....
T Consensus       182 ~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~  212 (332)
T cd05623         182 KGKYGPECDWWSLGVCMYEMLYGETPFYAES  212 (332)
T ss_pred             CCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC
Confidence            3468899999999999999999999996543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.80  E-value=1.2e-20  Score=166.82  Aligned_cols=147  Identities=12%  Similarity=0.132  Sum_probs=95.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccC-
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMS-   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~-   52 (291)
                      ..++.||+.||+|||+   .+|+||||||+||+++.+..                            +..|+|||.+.+ 
T Consensus       117 ~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  193 (342)
T cd07854         117 RLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSP  193 (342)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCc
Confidence            4678999999999999   99999999999999974321                            446999998754 


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHH-------HHHHhhcCccchhhh-hccccc-----chHHH
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKW-------VWKKLEKGEFQDLII-VCGMEK-----NNKEK  119 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~-----~~~~~  119 (291)
                      ..++.++|||||||++|||++|+.||...............       ....... .+..... ......     .....
T Consensus       194 ~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  272 (342)
T cd07854         194 NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLN-VIPSFVRNDGGEPRRPLRDLLPGV  272 (342)
T ss_pred             cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhh-hhhhhhhhcccccCCCHHHHccCC
Confidence            46788999999999999999999999654321000000000       0000000 0000000 000000     01123


Q ss_pred             HHHHHHHHHHccccCCCCCCCCCccchhhhhhc
Q 022858          120 AERMALVALWRVQYKPEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       120 ~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~  152 (291)
                      ...+.+++.+|++.||++||++.+++....++.
T Consensus       273 ~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~  305 (342)
T cd07854         273 NPEALDFLEQILTFNPMDRLTAEEALMHPYMSC  305 (342)
T ss_pred             CHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence            356789999999999999999999944455543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.80  E-value=4.9e-21  Score=155.72  Aligned_cols=128  Identities=23%  Similarity=0.221  Sum_probs=96.6

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCC--CCccc
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSF--PVTHK   58 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~--~~~~~   58 (291)
                      |+.-+..||+||-+.  ..|||||+||+||||+..+.                       ...|||||.+...  .|+.+
T Consensus       172 ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiR  249 (361)
T KOG1006|consen  172 ITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIR  249 (361)
T ss_pred             eeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchh
Confidence            444567899999984  89999999999999997654                       6689999998743  58999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      |||||+|++|+|+.||..|+.....      ..+++.+... +..+.+..    .....+....+..++..|+-.|.++|
T Consensus       250 SDvWSLGITL~EvAtG~fPyr~w~s------vfeql~~Vv~-gdpp~l~~----~~~~~~~s~~~~~fintCl~Kd~~~R  318 (361)
T KOG1006|consen  250 SDVWSLGITLYEVATGNFPYRKWDS------VFEQLCQVVI-GDPPILLF----DKECVHYSFSMVRFINTCLIKDRSDR  318 (361)
T ss_pred             hhhhhhcceEeeeecCCCCcchHHH------HHHHHHHHHc-CCCCeecC----cccccccCHHHHHHHHHHhhcccccC
Confidence            9999999999999999999875543      3444433332 21111111    11123456788899999999999999


Q ss_pred             CCCCcc
Q 022858          139 PSMTVR  144 (291)
Q Consensus       139 Ps~~~v  144 (291)
                      |+..++
T Consensus       319 pky~~L  324 (361)
T KOG1006|consen  319 PKYDDL  324 (361)
T ss_pred             cchhhh
Confidence            998887

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.80  E-value=3.9e-20  Score=161.04  Aligned_cols=154  Identities=19%  Similarity=0.131  Sum_probs=103.3

Q ss_pred             hhHHHHHHHHHHHHhcCC------CCCeEeecCCCCcEEEccCCC--------------------------CCccccCcc
Q 022858            2 HIIAIGTAEGIVSLHDGC------QQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPET   49 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~------~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~   49 (291)
                      .+|+..+++||+|||+..      +++|+|||||++|||+..|+.                          |..|||||+
T Consensus       310 cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEv  389 (534)
T KOG3653|consen  310 CRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEV  389 (534)
T ss_pred             HHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHH
Confidence            468999999999999843      567999999999999998865                          889999999


Q ss_pred             ccCC-CCc-----cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchH------
Q 022858           50 WMSF-PVT-----HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNK------  117 (291)
Q Consensus        50 ~~~~-~~~-----~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  117 (291)
                      +.+. ++.     .+.||||+|.+|||++++..-++.....+-...+-..+-..-.-+++.+++-.....+..+      
T Consensus       390 LEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h  469 (534)
T KOG3653|consen  390 LEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKH  469 (534)
T ss_pred             HhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcC
Confidence            9864 222     3589999999999999887655422111111111111111111122233332222222222      


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcccccc
Q 022858          118 EKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       118 ~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      ..+.-+.+.+..||+.|++.|-|+.-|  -+++.+.....
T Consensus       470 ~~~~~l~et~EeCWDhDaeARLTA~Cv--~eR~~~l~~~~  507 (534)
T KOG3653|consen  470 AGMAVLCETIEECWDHDAEARLTAGCV--EERMAELMMLW  507 (534)
T ss_pred             ccHHHHHHHHHHHcCCchhhhhhhHHH--HHHHHHHhccC
Confidence            335678889999999999999999877  66666655443

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.80  E-value=2.2e-20  Score=164.46  Aligned_cols=142  Identities=20%  Similarity=0.235  Sum_probs=95.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccC-
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMS-   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~-   52 (291)
                      ..++.|++.||+|||+   .+|+||||||+||+++.++.                            +..|+|||.+.+ 
T Consensus       108 ~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  184 (332)
T cd07857         108 QSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSF  184 (332)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCC
Confidence            4688999999999999   99999999999999986532                            457999998765 


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHH-----------HhhcCccchhhhh------cccccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWK-----------KLEKGEFQDLIIV------CGMEKN  115 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~------~~~~~~  115 (291)
                      ..++.++||||+|+++|++++|..||......    ........           .+...........      ......
T Consensus       185 ~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (332)
T cd07857         185 QSYTKAIDVWSVGCILAELLGRKPVFKGKDYV----DQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESI  260 (332)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH----HHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhh
Confidence            46889999999999999999999998653311    00000000           0000000000000      000000


Q ss_pred             hHHHHHHHHHHHHHccccCCCCCCCCCccchhhhh
Q 022858          116 NKEKAERMALVALWRVQYKPEAMPSMTVRPAKFML  150 (291)
Q Consensus       116 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L  150 (291)
                      .......+.+++.+|++.+|++||++.++.....+
T Consensus       261 ~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~  295 (332)
T cd07857         261 FPNANPLALDLLEKLLAFDPTKRISVEEALEHPYL  295 (332)
T ss_pred             CCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhh
Confidence            01124578899999999999999999998333333

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.80  E-value=2.1e-20  Score=158.71  Aligned_cols=127  Identities=24%  Similarity=0.221  Sum_probs=97.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||+|||+.  .+++|+||+|+||+++.++.                        +..|+|||.+.+..++.
T Consensus       102 ~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~  179 (264)
T cd06623         102 AYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSY  179 (264)
T ss_pred             HHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCc
Confidence            57889999999999973  79999999999999987653                        46799999998888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHH-HHHHHHHHHHHccccCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKE-KAERMALVALWRVQYKPE  136 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~~p~  136 (291)
                      ++|+||||+++||+++|..|+......    ...+ ..........         ...... .+..+.+++.+|++.+|+
T Consensus       180 ~~Dv~slG~il~~l~tg~~p~~~~~~~----~~~~-~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~~p~  245 (264)
T cd06623         180 AADIWSLGLTLLECALGKFPFLPPGQP----SFFE-LMQAICDGPP---------PSLPAEEFSPEFRDFISACLQKDPK  245 (264)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCcccccc----CHHH-HHHHHhcCCC---------CCCCcccCCHHHHHHHHHHccCChh
Confidence            999999999999999999998655421    1111 1111111111         111122 457889999999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +||++.++
T Consensus       246 ~R~~~~~l  253 (264)
T cd06623         246 KRPSAAEL  253 (264)
T ss_pred             hCCCHHHH
Confidence            99999998

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.80  E-value=1.5e-20  Score=172.88  Aligned_cols=135  Identities=17%  Similarity=0.166  Sum_probs=112.7

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCC
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~   54 (291)
                      +|+|..|||+||.|||+   ..+|||||-.+|||+.+...                          .+.|||-|.+....
T Consensus       800 lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~  876 (1177)
T KOG1025|consen  800 LLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRK  876 (1177)
T ss_pred             HHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccC
Confidence            37899999999999999   99999999999999975422                          67899999999999


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      |+.++|||||||++||++| |..|+++....                 ++.+++......+.++.|...+..++.+||..
T Consensus       877 ~thqSDVWsfGVtiWElmTFGa~Py~gi~~~-----------------eI~dlle~geRLsqPpiCtiDVy~~mvkCwmi  939 (1177)
T KOG1025|consen  877 YTHQSDVWSFGVTIWELMTFGAKPYDGIPAE-----------------EIPDLLEKGERLSQPPICTIDVYMVMVKCWMI  939 (1177)
T ss_pred             CCchhhhhhhhhhHHHHHhcCCCccCCCCHH-----------------HhhHHHhccccCCCCCCccHHHHHHHHHHhcc
Confidence            9999999999999999996 88898766543                 23344444445667788899999999999999


Q ss_pred             CCCCCCCCCccchhhhhhcccccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      |+..||+++++  ...+.+....+
T Consensus       940 d~~~rp~fkel--~~~fs~~ardp  961 (1177)
T KOG1025|consen  940 DADSRPTFKEL--AEEFSRMARDP  961 (1177)
T ss_pred             CcccCccHHHH--HHHHHHHhcCc
Confidence            99999999988  77766655444

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.80  E-value=7.4e-20  Score=162.04  Aligned_cols=140  Identities=16%  Similarity=0.175  Sum_probs=93.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccC-CCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMS-FPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~-~~~~~~~   59 (291)
                      ..++.|++.||+|||+   .+|+||||||+||+++.++.                     +..|+|||.+.+ ..++.++
T Consensus       123 ~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  199 (345)
T cd07877         123 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV  199 (345)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCCCCEEEecccccccccccccccccCCCccCHHHHhCccCCCchh
Confidence            4588999999999999   99999999999999987643                     567999998766 4688899


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchh-------HHHHHHhhcCccchhhh--hcccccc----hHHHHHHHHHH
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGF-------KWVWKKLEKGEFQDLII--VCGMEKN----NKEKAERMALV  126 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~l  126 (291)
                      |||||||++|||++|+.||.............       ......+........+.  +......    .......+.++
T Consensus       200 DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  279 (345)
T cd07877         200 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDL  279 (345)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHH
Confidence            99999999999999999985433210000000       00000000000000000  0000000    00124567899


Q ss_pred             HHHccccCCCCCCCCCcc
Q 022858          127 ALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       127 ~~~cl~~~p~~RPs~~~v  144 (291)
                      +.+|++.||.+||++.++
T Consensus       280 i~~~L~~dp~~R~t~~e~  297 (345)
T cd07877         280 LEKMLVLDSDKRITAAQA  297 (345)
T ss_pred             HHHHcCCChhhcCCHHHH
Confidence            999999999999999988

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=3e-20  Score=158.25  Aligned_cols=123  Identities=20%  Similarity=0.147  Sum_probs=93.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      ++++.|++.||.|||+   .+++|+||||+||+++.++.                           +..|+|||++.+..
T Consensus       109 ~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  185 (264)
T cd06653         109 RRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEG  185 (264)
T ss_pred             HHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCC
Confidence            4688999999999999   99999999999999986542                           45799999998888


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++|+||||+++||+++|+.||.....       ...+.......         .....+......+.+++.+|++ +
T Consensus       186 ~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~---------~~~~~p~~~~~~~~~~i~~~l~-~  248 (264)
T cd06653         186 YGRKADVWSVACTVVEMLTEKPPWAEYEA-------MAAIFKIATQP---------TKPMLPDGVSDACRDFLKQIFV-E  248 (264)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCccCH-------HHHHHHHHcCC---------CCCCCCcccCHHHHHHHHHHhc-C
Confidence            89999999999999999999999864321       11111111110         1111223344678899999999 5


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |..||+..++
T Consensus       249 ~~~r~~~~~~  258 (264)
T cd06653         249 EKRRPTAEFL  258 (264)
T ss_pred             cccCccHHHH
Confidence            7999998877

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=5.1e-20  Score=162.16  Aligned_cols=77  Identities=29%  Similarity=0.411  Sum_probs=67.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccC----
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMS----   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~----   52 (291)
                      ..++.||+.||+|||+   ++|+||||||+|||++.++.                         ++.|+|||++..    
T Consensus       105 ~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  181 (331)
T cd05597         105 RFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDG  181 (331)
T ss_pred             HHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhcccc
Confidence            3578899999999999   99999999999999976542                         678999999863    


Q ss_pred             -CCCccccceechhHHHHHHhhCCCccccc
Q 022858           53 -FPVTHKCDVRSFGMLLFEILGRRRMRTCQ   81 (291)
Q Consensus        53 -~~~~~~~Dv~s~G~~l~elltg~~p~~~~   81 (291)
                       ..++.++|||||||++|||++|+.||...
T Consensus       182 ~~~~~~~~DiwslG~~l~el~~g~~Pf~~~  211 (331)
T cd05597         182 KGRYGPECDWWSLGVCMYEMLYGETPFYAE  211 (331)
T ss_pred             ccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence             45788999999999999999999998654

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.80  E-value=8e-20  Score=161.70  Aligned_cols=149  Identities=16%  Similarity=0.174  Sum_probs=98.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccC-CCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMS-FPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~-~~~~~~~   59 (291)
                      ..++.|++.||+|||+   .+|+||||||+||+++.++.                     +..|+|||.+.+ ..++.++
T Consensus       121 ~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  197 (343)
T cd07851         121 QFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV  197 (343)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEccccccccccccccCCcccccccCHHHHhCCCCCCchH
Confidence            4688999999999999   99999999999999986542                     567999998865 3678899


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhH-------HHHHHhhcCccchhhhhccc------ccchHHHHHHHHHH
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFK-------WVWKKLEKGEFQDLIIVCGM------EKNNKEKAERMALV  126 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l  126 (291)
                      ||||||+++||+++|+.||...........+.+       .....+........+..-..      ..........+.++
T Consensus       198 DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dl  277 (343)
T cd07851         198 DIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDL  277 (343)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHH
Confidence            999999999999999999865432100000000       00000000000000000000      00011125678899


Q ss_pred             HHHccccCCCCCCCCCccchhhhhhcc
Q 022858          127 ALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       127 ~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      +.+|++.+|++|||+.++.....+...
T Consensus       278 i~~~l~~~P~~Rpt~~ell~h~~~~~~  304 (343)
T cd07851         278 LEKMLVLDPDKRITAAEALAHPYLAEY  304 (343)
T ss_pred             HHHhCCCChhhCCCHHHHhcCCCcccc
Confidence            999999999999999999433345443

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.80  E-value=2.8e-20  Score=160.70  Aligned_cols=118  Identities=22%  Similarity=0.254  Sum_probs=91.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCccccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      ..++.|++.||+|||+   .+++|+||+|+||+++.++.                     ++.|+|||.+.+...+.++|
T Consensus       104 ~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  180 (290)
T cd05580         104 RFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVD  180 (290)
T ss_pred             HHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCcccc
Confidence            4578999999999999   99999999999999987643                     56799999998888889999


Q ss_pred             eechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCC
Q 022858           61 VRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPS  140 (291)
Q Consensus        61 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs  140 (291)
                      |||||+++|+|++|..||.....        ....+....+..          ..+......+.+++.+||+.+|.+||+
T Consensus       181 i~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~~p~~R~~  242 (290)
T cd05580         181 WWALGILIYEMLAGYPPFFDDNP--------IQIYEKILEGKV----------RFPSFFSPDAKDLIRNLLQVDLTKRLG  242 (290)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcCCc----------cCCccCCHHHHHHHHHHccCCHHHccC
Confidence            99999999999999999864431        111122211111          111122467788999999999999984

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.79  E-value=1.4e-19  Score=160.58  Aligned_cols=125  Identities=24%  Similarity=0.325  Sum_probs=100.9

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCCC
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~~   55 (291)
                      .++.|++.|+.|||+   .+|+||||||+|+|+.....                           |+.|+|||++....|
T Consensus       139 ~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y  215 (382)
T KOG0032|consen  139 GIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPY  215 (382)
T ss_pred             HHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCC
Confidence            578999999999999   99999999999999974421                           999999999999999


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +..+||||.|+++|.|++|.+||.......        ....+..+.+ ++     ..+.........-+++..++..||
T Consensus       216 ~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~--------~~~~i~~~~~-~f-----~~~~w~~is~~akd~i~~ll~~dp  281 (382)
T KOG0032|consen  216 GDEVDVWSIGVILYILLSGVPPFWGETEFE--------IFLAILRGDF-DF-----TSEPWDDISESAKDFIRKLLEFDP  281 (382)
T ss_pred             CcccchhHHHHHHHHHhhCCCCCcCCChhH--------HHHHHHcCCC-CC-----CCCCccccCHHHHHHHHHhcccCc
Confidence            999999999999999999999998776331        1123333322 11     123334456778889999999999


Q ss_pred             CCCCCCCcc
Q 022858          136 EAMPSMTVR  144 (291)
Q Consensus       136 ~~RPs~~~v  144 (291)
                      .+|+++.++
T Consensus       282 ~~R~ta~~~  290 (382)
T KOG0032|consen  282 RKRLTAAQA  290 (382)
T ss_pred             ccCCCHHHH
Confidence            999999999

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.79  E-value=7.9e-20  Score=160.76  Aligned_cols=140  Identities=17%  Similarity=0.174  Sum_probs=94.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccC-CCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMS-FPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~-~~~~~~~   59 (291)
                      ..++.|++.||+|||+   .+|+||||||+||+++.++.                     +..|+|||.+.+ ..++.++
T Consensus       111 ~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  187 (328)
T cd07856         111 QYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEV  187 (328)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHH
Confidence            3578899999999999   99999999999999986542                     557999998766 5688999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhH-------HHHHHhhcCccchhhhh-cccccch-----HHHHHHHHHH
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFK-------WVWKKLEKGEFQDLIIV-CGMEKNN-----KEKAERMALV  126 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~l  126 (291)
                      ||||||+++|||++|+.||...........+.+       ............++... ......+     +.....+.++
T Consensus       188 Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  267 (328)
T cd07856         188 DIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDL  267 (328)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHH
Confidence            999999999999999999865432100000000       00000001111111100 0000001     1234678899


Q ss_pred             HHHccccCCCCCCCCCcc
Q 022858          127 ALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       127 ~~~cl~~~p~~RPs~~~v  144 (291)
                      +.+|++.+|++||++.++
T Consensus       268 i~~~l~~~P~~R~t~~el  285 (328)
T cd07856         268 LEKMLVFDPQKRISAAEA  285 (328)
T ss_pred             HHHHcCCChhhCCCHHHH
Confidence            999999999999999988

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.79  E-value=1e-19  Score=160.24  Aligned_cols=76  Identities=29%  Similarity=0.449  Sum_probs=67.3

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccC-----
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMS-----   52 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~-----   52 (291)
                      .++.|++.||+|||+   ++|+||||||+|||++.++.                         ++.|+|||++.+     
T Consensus       106 ~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  182 (331)
T cd05624         106 FYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGM  182 (331)
T ss_pred             HHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCC
Confidence            578899999999999   99999999999999986532                         678999998875     


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQ   81 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~   81 (291)
                      ..++.++||||||+++|||++|+.||...
T Consensus       183 ~~~~~~~DiwSlGvil~ell~g~~Pf~~~  211 (331)
T cd05624         183 GKYGPECDWWSLGVCMYEMLYGETPFYAE  211 (331)
T ss_pred             CCCCCcccEEeeehhhhhhhhCCCCccCC
Confidence            46788999999999999999999999644

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.79  E-value=2.2e-20  Score=164.69  Aligned_cols=136  Identities=17%  Similarity=0.195  Sum_probs=94.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------------------CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------------------TPG   43 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------------------t~~   43 (291)
                      +.++.|++.||+|||+   .+++|+||||+||+++.+..                                      +..
T Consensus       122 ~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (335)
T PTZ00024        122 KCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLW  198 (335)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccC
Confidence            4688999999999999   99999999999999986532                                      345


Q ss_pred             cccCccccCC-CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC---ccchhhh-----------
Q 022858           44 YAAPETWMSF-PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG---EFQDLII-----------  108 (291)
Q Consensus        44 y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----------  108 (291)
                      |+|||.+.+. .++.++||||||+++|||++|..||.......    ....+.......   .+.....           
T Consensus       199 y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (335)
T PTZ00024        199 YRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID----QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRK  274 (335)
T ss_pred             CCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCchhhCcchhhcccccccCcCC
Confidence            9999998764 47889999999999999999999986554211    111111111000   0000000           


Q ss_pred             hcccccchHHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          109 VCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       109 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +.............+.+++.+|++.+|++||++.++
T Consensus       275 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~  310 (335)
T PTZ00024        275 PKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEA  310 (335)
T ss_pred             cccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHH
Confidence            000000111234668899999999999999999999

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.79  E-value=1.2e-19  Score=142.78  Aligned_cols=79  Identities=28%  Similarity=0.335  Sum_probs=70.6

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccC----CCC
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMS----FPV   55 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~----~~~   55 (291)
                      +|+..+..||.|||+  +..+||||+||+|||++.++.                       .-.|||||.+..    ..|
T Consensus       152 kIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY  229 (282)
T KOG0984|consen  152 KIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGY  229 (282)
T ss_pred             HhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccc
Confidence            689999999999999  489999999999999998764                       557999998864    379


Q ss_pred             ccccceechhHHHHHHhhCCCccccccc
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKA   83 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~   83 (291)
                      +.|+||||+|++++||.+++.||+....
T Consensus       230 ~vksDvWSLGItmiElA~lr~PY~~w~t  257 (282)
T KOG0984|consen  230 SVKSDVWSLGITMIEMAILRFPYESWGT  257 (282)
T ss_pred             eeehhhhhhhhhhhhhhhccccccccCC
Confidence            9999999999999999999999986654

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.79  E-value=2.6e-19  Score=158.47  Aligned_cols=149  Identities=17%  Similarity=0.144  Sum_probs=98.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccC-CCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMS-FPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~-~~~~~~~   59 (291)
                      ..++.|++.||+|||+   .+|+||||||+||+++.++.                     ++.|++||++.+ ..++.++
T Consensus       121 ~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  197 (343)
T cd07880         121 QFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTV  197 (343)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHH
Confidence            4688999999999999   99999999999999986543                     668999998876 4588899


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCch-------hHHHHHHhhcCccchhhhh--ccc----ccchHHHHHHHHHH
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSG-------FKWVWKKLEKGEFQDLIIV--CGM----EKNNKEKAERMALV  126 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~l  126 (291)
                      |+||||+++|++++|..||............       .......+...........  ...    ..........+.++
T Consensus       198 Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  277 (343)
T cd07880         198 DIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNV  277 (343)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHH
Confidence            9999999999999999998644321000000       0000001100000010000  000    00011233467899


Q ss_pred             HHHccccCCCCCCCCCccchhhhhhcc
Q 022858          127 ALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       127 ~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      +.+|++.||++||++.++.....++..
T Consensus       278 i~~~l~~dP~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         278 LEKMLVLDAESRITAAEALAHPYFEEF  304 (343)
T ss_pred             HHHHcCCChhhCCCHHHHhcCccHhhh
Confidence            999999999999999998333444444

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.78  E-value=6.3e-20  Score=153.62  Aligned_cols=134  Identities=19%  Similarity=0.227  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCccc
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVTHK   58 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~~~   58 (291)
                      +..|++.||+|||.   +-|+|||||++|+|++..+.                        |.+|.|||.+.+. .|++.
T Consensus       182 L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~  258 (419)
T KOG0663|consen  182 LMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTA  258 (419)
T ss_pred             HHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcc
Confidence            56899999999999   99999999999999997765                        8899999999985 69999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---Cccchhhhhc-----ccccc--------hHH--HH
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---GEFQDLIIVC-----GMEKN--------NKE--KA  120 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-----~~~~~--------~~~--~~  120 (291)
                      .|+||+|||+.|++++++.|.+.....    -.+.+.+....   ..+..+....     .....        ...  ..
T Consensus       259 iDMWSvGCI~aE~l~~kPlf~G~sE~d----Ql~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~ls  334 (419)
T KOG0663|consen  259 VDMWSVGCIFAELLTQKPLFPGKSEID----QLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLS  334 (419)
T ss_pred             hhhhhHHHHHHHHHhcCCCCCCCchHH----HHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccc
Confidence            999999999999999999987665321    11112111110   0111110000     00000        000  23


Q ss_pred             HHHHHHHHHccccCCCCCCCCCcc
Q 022858          121 ERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       121 ~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ..-.+++...+.+||.+|-|+.|.
T Consensus       335 e~g~~Lln~llt~dP~kR~tA~~~  358 (419)
T KOG0663|consen  335 EQGFDLLNKLLTYDPGKRITAEDG  358 (419)
T ss_pred             hhHHHHHHHHhccCccccccHHHh
Confidence            556788889999999999999988

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.78  E-value=1.8e-19  Score=154.63  Aligned_cols=122  Identities=19%  Similarity=0.133  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------------------------
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------------------------   40 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------------------------   40 (291)
                      ++.+|+.||+|||-   .+||.|||||+||||-+++.                                           
T Consensus       184 YaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~  260 (459)
T KOG0610|consen  184 YAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSP  260 (459)
T ss_pred             HHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCccccccccccccc
Confidence            56789999999999   99999999999999976543                                           


Q ss_pred             -------------------------------------CCccccCccccCCCCccccceechhHHHHHHhhCCCccccccc
Q 022858           41 -------------------------------------TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKA   83 (291)
Q Consensus        41 -------------------------------------t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~   83 (291)
                                                           |-.|+|||++.+...+.++|-|+|||++|||+.|..||.+...
T Consensus       261 r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~  340 (459)
T KOG0610|consen  261 RCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN  340 (459)
T ss_pred             chhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCc
Confidence                                                 5569999999999999999999999999999999999988876


Q ss_pred             cCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCC----CCcc
Q 022858           84 RSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPS----MTVR  144 (291)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs----~~~v  144 (291)
                      .+.                +.+++-....-+..+.....+.+|+.+.|.+||.+|-.    ++||
T Consensus       341 ~~T----------------l~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eI  389 (459)
T KOG0610|consen  341 KET----------------LRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEI  389 (459)
T ss_pred             hhh----------------HHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHh
Confidence            432                12222222222222344577889999999999999987    5555

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.78  E-value=9.2e-20  Score=152.14  Aligned_cols=126  Identities=25%  Similarity=0.265  Sum_probs=95.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.++.+++.||.|||+   .+++|+||+|+||+++.++.                       +..|++||......++.+
T Consensus        90 ~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~  166 (244)
T smart00220       90 RFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKA  166 (244)
T ss_pred             HHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCch
Confidence            5688999999999999   89999999999999997643                       567999999988888999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|||+||++++++++|..|+......       ..............       ..........+.+++.+|+..+|++|
T Consensus       167 ~Di~slG~~l~~l~~~~~p~~~~~~~-------~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~~p~~R  232 (244)
T smart00220      167 VDVWSLGVILYELLTGKPPFPGDDQL-------LELFKKIGKPKPPF-------PPPEWKISPEAKDLIRKLLVKDPEKR  232 (244)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCcH-------HHHHHHHhccCCCC-------ccccccCCHHHHHHHHHHccCCchhc
Confidence            99999999999999999998653111       11111111111110       00000044678899999999999999


Q ss_pred             CCCCcc
Q 022858          139 PSMTVR  144 (291)
Q Consensus       139 Ps~~~v  144 (291)
                      |++.++
T Consensus       233 p~~~~~  238 (244)
T smart00220      233 LTAEEA  238 (244)
T ss_pred             cCHHHH
Confidence            999988

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.78  E-value=1.2e-19  Score=152.85  Aligned_cols=120  Identities=25%  Similarity=0.268  Sum_probs=93.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||.|||+   .+++|+||||+||+++.++.                        +..|++||...+...+.
T Consensus        96 ~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~  172 (250)
T cd05123          96 RFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGK  172 (250)
T ss_pred             HHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCc
Confidence            4678999999999999   99999999999999986542                        55799999998888899


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|+||||+++|++++|..||......        ..........          ...+......+.+++.+|+..||++
T Consensus       173 ~~D~~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~~----------~~~~~~~~~~l~~~i~~~l~~~p~~  234 (250)
T cd05123         173 AVDWWSLGVLLYEMLTGKPPFYAEDRK--------EIYEKILKDP----------LRFPEFLSPEARDLISGLLQKDPTK  234 (250)
T ss_pred             hhhHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHhcCC----------CCCCCCCCHHHHHHHHHHhcCCHhh
Confidence            999999999999999999998644321        1111111110          1111222467789999999999999


Q ss_pred             CCCCC
Q 022858          138 MPSMT  142 (291)
Q Consensus       138 RPs~~  142 (291)
                      ||++.
T Consensus       235 R~~~~  239 (250)
T cd05123         235 RLGSG  239 (250)
T ss_pred             CCCcc
Confidence            99994

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.78  E-value=2.5e-20  Score=154.21  Aligned_cols=124  Identities=24%  Similarity=0.187  Sum_probs=98.5

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCccc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      .|+++.+.||+|||.   ..-||||||..||||+.++.                        |+.|||||++..-.|+.+
T Consensus       133 ~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~  209 (502)
T KOG0574|consen  133 AVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTK  209 (502)
T ss_pred             HHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchh
Confidence            477899999999999   89999999999999997754                        999999999998899999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +||||+|++..||..|++||.+-.+...               .+.-...|+..-..+..-...+-+++..|+-.+|++|
T Consensus       210 ADIWSLGITaIEMAEG~PPYsDIHPMRA---------------IFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R  274 (502)
T KOG0574|consen  210 ADIWSLGITAIEMAEGRPPYSDIHPMRA---------------IFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEER  274 (502)
T ss_pred             hhHhhhcchhhhhhcCCCCcccccccce---------------eEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHH
Confidence            9999999999999999999976654310               0000011111222344456788899999999999999


Q ss_pred             CCCCcc
Q 022858          139 PSMTVR  144 (291)
Q Consensus       139 Ps~~~v  144 (291)
                      -++.++
T Consensus       275 ~TA~~L  280 (502)
T KOG0574|consen  275 KTALRL  280 (502)
T ss_pred             HHHHHH
Confidence            988766

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=2.5e-19  Score=157.67  Aligned_cols=132  Identities=14%  Similarity=0.153  Sum_probs=103.6

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCc-c
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVT-H   57 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~-~   57 (291)
                      +++.||+.|+.|+|.   ..+|||||||+|+.+-+..+                        +..|.|||.+.+..|+ +
T Consensus       122 kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAP  198 (864)
T KOG4717|consen  122 KYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAP  198 (864)
T ss_pred             HHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCc
Confidence            578999999999999   99999999999998754432                        7789999999998887 5


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||+||+||-|++|+.||......+.                +--++|-+  -..+.....++.+|+..++..||++
T Consensus       199 AVDiWSLGVILyMLVCGq~PFqeANDSET----------------LTmImDCK--YtvPshvS~eCrdLI~sMLvRdPkk  260 (864)
T KOG4717|consen  199 AVDIWSLGVILYMLVCGQPPFQEANDSET----------------LTMIMDCK--YTVPSHVSKECRDLIQSMLVRDPKK  260 (864)
T ss_pred             chhhhHHHHHHHHHHhCCCccccccchhh----------------hhhhhccc--ccCchhhhHHHHHHHHHHHhcCchh
Confidence            68999999999999999999987654321                11122211  1223455678899999999999999


Q ss_pred             CCCCCccchhhhhhcccc
Q 022858          138 MPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       138 RPs~~~v~~~~~L~~~~~  155 (291)
                      |.+..+|....+|+..-.
T Consensus       261 RAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  261 RASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             hccHHHHhccccccCCCC
Confidence            999999855566666544

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.77  E-value=5.7e-19  Score=151.41  Aligned_cols=121  Identities=21%  Similarity=0.321  Sum_probs=100.0

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCc-cc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVT-HK   58 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~-~~   58 (291)
                      .|++||..|+.|+|.   ++++|||||.+|||||.|++                       ++.|.+||.+.+.+|. +.
T Consensus       157 hfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPE  233 (668)
T KOG0611|consen  157 HFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPE  233 (668)
T ss_pred             HHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCc
Confidence            588999999999999   99999999999999998865                       8899999999998876 67


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|.||+||+||.|+.|.-||++...        ..+.+.+..|.+.+.-           .+.....|+.+++..||++|
T Consensus       234 VDsWsLGvLLYtLVyGtMPFDG~Dh--------k~lvrQIs~GaYrEP~-----------~PSdA~gLIRwmLmVNP~RR  294 (668)
T KOG0611|consen  234 VDSWSLGVLLYTLVYGTMPFDGRDH--------KRLVRQISRGAYREPE-----------TPSDASGLIRWMLMVNPERR  294 (668)
T ss_pred             cchhhHHHHHHHHhhcccccCCchH--------HHHHHHhhcccccCCC-----------CCchHHHHHHHHHhcCcccc
Confidence            9999999999999999999987653        2233445555443321           22445678899999999999


Q ss_pred             CCCCccc
Q 022858          139 PSMTVRP  145 (291)
Q Consensus       139 Ps~~~v~  145 (291)
                      .|+.+|.
T Consensus       295 ATieDiA  301 (668)
T KOG0611|consen  295 ATIEDIA  301 (668)
T ss_pred             hhHHHHh
Confidence            9999983

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.77  E-value=1.6e-19  Score=155.87  Aligned_cols=122  Identities=22%  Similarity=0.182  Sum_probs=88.7

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCC--CC
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSF--PV   55 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~--~~   55 (291)
                      .++.|++.||.|||+   .+++||||||+|||++.++.                         +..|+|||.+...  .+
T Consensus       109 ~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  185 (290)
T cd05613         109 IYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGH  185 (290)
T ss_pred             HHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCC
Confidence            467799999999999   99999999999999986543                         5679999998753  46


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||||+++|+|++|..|+......    .............          ..+.+......+.+++.+|++.+|
T Consensus       186 ~~~~Dv~slG~~l~~ll~g~~p~~~~~~~----~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ll~~~l~~~p  251 (290)
T cd05613         186 DKAVDWWSMGVLMYELLTGASPFTVDGEK----NSQAEISRRILKS----------EPPYPQEMSALAKDIIQRLLMKDP  251 (290)
T ss_pred             CccccHHHHHHHHHHHhcCCCCCCcCCcc----ccHHHHHHHhhcc----------CCCCCccCCHHHHHHHHHHhcCCH
Confidence            78899999999999999999998643211    1111111111110          011122334677899999999999


Q ss_pred             CCCCCC
Q 022858          136 EAMPSM  141 (291)
Q Consensus       136 ~~RPs~  141 (291)
                      ++||+.
T Consensus       252 ~~R~~~  257 (290)
T cd05613         252 KKRLGC  257 (290)
T ss_pred             HHhcCC
Confidence            999853

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.76  E-value=1.3e-19  Score=167.20  Aligned_cols=123  Identities=24%  Similarity=0.296  Sum_probs=92.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccC---CC-----------------------------CCccccCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK---FW-----------------------------TPGYAAPET   49 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~---~~-----------------------------t~~y~aPE~   49 (291)
                      +.++.|++.||++||+   .+||||||||+||||+..   +.                             |-+|+|||+
T Consensus       609 ~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~  685 (903)
T KOG1027|consen  609 ISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQ  685 (903)
T ss_pred             HHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHH
Confidence            4678999999999999   999999999999999873   21                             889999999


Q ss_pred             ccCCCCccccceechhHHHHHHhhC-CCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHH
Q 022858           50 WMSFPVTHKCDVRSFGMLLFEILGR-RRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVAL  128 (291)
Q Consensus        50 ~~~~~~~~~~Dv~s~G~~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  128 (291)
                      +....-+..+||||+||++|..++| ..||......+..          +..++. .+.   . .....++  ...+|+.
T Consensus       686 L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~N----------Il~~~~-~L~---~-L~~~~d~--eA~dLI~  748 (903)
T KOG1027|consen  686 LREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQAN----------ILTGNY-TLV---H-LEPLPDC--EAKDLIS  748 (903)
T ss_pred             HhccccCcccchhhcCceEEEEecCCccCCCchHHhhhh----------hhcCcc-cee---e-eccCchH--HHHHHHH
Confidence            9998888899999999999998876 7788655432110          001100 000   0 1111222  6678899


Q ss_pred             HccccCCCCCCCCCcc
Q 022858          129 WRVQYKPEAMPSMTVR  144 (291)
Q Consensus       129 ~cl~~~p~~RPs~~~v  144 (291)
                      +++..+|..||++.+|
T Consensus       749 ~ml~~dP~~RPsa~~V  764 (903)
T KOG1027|consen  749 RMLNPDPQLRPSATDV  764 (903)
T ss_pred             HhcCCCcccCCCHHHH
Confidence            9999999999999999

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.76  E-value=4e-19  Score=152.13  Aligned_cols=121  Identities=21%  Similarity=0.259  Sum_probs=93.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------------------   40 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------------------   40 (291)
                      +.|+.|++.||+|||+   .+++|+||||+||+++.++.                                         
T Consensus       105 ~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (280)
T cd05581         105 RFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFAS  181 (280)
T ss_pred             HHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCcccccccccccccccc
Confidence            5688999999999999   99999999999999986432                                         


Q ss_pred             ---CCccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchH
Q 022858           41 ---TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNK  117 (291)
Q Consensus        41 ---t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (291)
                         +..|++||......++.++||||||++++++++|..|+......        .........          ....+.
T Consensus       182 ~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~----------~~~~~~  243 (280)
T cd05581         182 FVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY--------LTFQKILKL----------EYSFPP  243 (280)
T ss_pred             ccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHhc----------CCCCCC
Confidence               35799999988888899999999999999999999998755321        011111110          011112


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCCCc
Q 022858          118 EKAERMALVALWRVQYKPEAMPSMTV  143 (291)
Q Consensus       118 ~~~~~~~~l~~~cl~~~p~~RPs~~~  143 (291)
                      .....+.+++.+|++.+|++||++.+
T Consensus       244 ~~~~~~~~li~~~l~~~p~~R~~~~~  269 (280)
T cd05581         244 NFPPDAKDLIEKLLVLDPQDRLGVNE  269 (280)
T ss_pred             ccCHHHHHHHHHHhcCCHhhCCCccc
Confidence            22467889999999999999999943

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.74  E-value=2.3e-18  Score=143.18  Aligned_cols=79  Identities=27%  Similarity=0.332  Sum_probs=70.9

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------------CCccccCcccc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------------TPGYAAPETWM   51 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------------t~~y~aPE~~~   51 (291)
                      +|+.||+.|++|||+   +=|+||||||.|||+..++.                               |++|.|||.+.
T Consensus       136 silwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLL  212 (438)
T KOG0666|consen  136 SILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLL  212 (438)
T ss_pred             HHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhc
Confidence            688999999999999   99999999999999987732                               88999999999


Q ss_pred             CC-CCccccceechhHHHHHHhhCCCcccccccc
Q 022858           52 SF-PVTHKCDVRSFGMLLFEILGRRRMRTCQKAR   84 (291)
Q Consensus        52 ~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~   84 (291)
                      +. .|+.+.||||.||++.||+|-++.|.+....
T Consensus       213 Ga~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k  246 (438)
T KOG0666|consen  213 GARHYTKAIDVWAIGCIFAELLTLEPLFKGREEK  246 (438)
T ss_pred             ccccccchhhhHHHHHHHHHHHccCccccchhhh
Confidence            85 6999999999999999999999888765543

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.74  E-value=1.9e-18  Score=151.82  Aligned_cols=130  Identities=21%  Similarity=0.279  Sum_probs=99.1

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccccc
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      ++..+.+|++|||+   ++||.|||||+|.+||.++-                       |+.|.|||.+.+...+.++|
T Consensus       525 ~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avD  601 (732)
T KOG0614|consen  525 YVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVD  601 (732)
T ss_pred             hHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhH
Confidence            45568899999999   99999999999999998754                       99999999999999999999


Q ss_pred             eechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCC
Q 022858           61 VRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPS  140 (291)
Q Consensus        61 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs  140 (291)
                      .||+|+++|||++|.+||.+..+...    .+.+.+-+..            -..+....+...+++.+....+|..|-.
T Consensus       602 yWaLGIli~ELL~G~pPFs~~dpmkt----Yn~ILkGid~------------i~~Pr~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  602 YWALGILIYELLTGSPPFSGVDPMKT----YNLILKGIDK------------IEFPRRITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCchHHH----HHHHHhhhhh------------hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence            99999999999999999988776422    1212111111            1123344456677788888899999865


Q ss_pred             -----CCccchhhhhhc
Q 022858          141 -----MTVRPAKFMLHG  152 (291)
Q Consensus       141 -----~~~v~~~~~L~~  152 (291)
                           +.+|.+..++++
T Consensus       666 ~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  666 YQKGGINDIKKHRWFEG  682 (732)
T ss_pred             cccCChHHHHhhhhhhc
Confidence                 455555555544

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=2.2e-17  Score=144.52  Aligned_cols=114  Identities=15%  Similarity=0.175  Sum_probs=78.6

Q ss_pred             CCccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHh----------------------
Q 022858           41 TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKL----------------------   98 (291)
Q Consensus        41 t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~----------------------   98 (291)
                      |..|.|||++.+..|++.+||||++|+++||+||...|+..... .+..--+++...+                      
T Consensus       414 TRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~-~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFn  492 (590)
T KOG1290|consen  414 TRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGE-NYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFN  492 (590)
T ss_pred             hhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCC-CCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhc
Confidence            78899999999999999999999999999999999988765544 2222222222111                      


Q ss_pred             hcCccchhhh-------hccc--ccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcccc
Q 022858           99 EKGEFQDLII-------VCGM--EKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus        99 ~~~~~~~~~~-------~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ++|.+..+-.       .-+.  -....+....+.++..-+|+.+|++|||+.+.+...+|.....
T Consensus       493 r~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~  558 (590)
T KOG1290|consen  493 RRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAG  558 (590)
T ss_pred             cccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCccccCCCC
Confidence            1122211100       0000  1235677889999999999999999999999954566665544

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.71  E-value=1.6e-17  Score=138.65  Aligned_cols=133  Identities=17%  Similarity=0.184  Sum_probs=94.2

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------------CCccccCc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------------TPGYAAPE   48 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------------t~~y~aPE   48 (291)
                      +++++||.||.|||.   ++|.||||||+|||-.....                                  +..|||||
T Consensus       180 ~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPE  256 (463)
T KOG0607|consen  180 RVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPE  256 (463)
T ss_pred             HHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchh
Confidence            578999999999999   99999999999999754322                                  45699999


Q ss_pred             cccC-----CCCccccceechhHHHHHHhhCCCccccccccCC-------CCchhHHHHHHhhcCccchhhhhcccccch
Q 022858           49 TWMS-----FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSG-------FPSGFKWVWKKLEKGEFQDLIIVCGMEKNN  116 (291)
Q Consensus        49 ~~~~-----~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (291)
                      +..-     ..|+.+.|.||+|+++|-|++|.+||.+.=....       -....+.+...+.+|.+ ++.|.     ..
T Consensus       257 VVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkY-eFPdk-----dW  330 (463)
T KOG0607|consen  257 VVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKY-EFPDK-----DW  330 (463)
T ss_pred             HHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCC-cCChh-----hh
Confidence            8752     3688999999999999999999999976533211       01112222333333322 22221     12


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          117 KEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       117 ~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .......-+++...+..++.+|-++.++
T Consensus       331 ahIS~eakdlisnLlvrda~~rlsa~~v  358 (463)
T KOG0607|consen  331 AHISSEAKDLISNLLVRDAKQRLSAAQV  358 (463)
T ss_pred             HHhhHHHHHHHHHHHhccHHhhhhhhhc
Confidence            3344555677777888999999999888

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=4.9e-18  Score=147.08  Aligned_cols=145  Identities=23%  Similarity=0.149  Sum_probs=98.7

Q ss_pred             hhHHHHHHHHHHHHhcCC-----CCCeEeecCCCCcEEEccCCC----------------------------CCccccCc
Q 022858            2 HIIAIGTAEGIVSLHDGC-----QQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPE   48 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~-----~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE   48 (291)
                      ++++..+|.||++||.+.     ++.|.|||||+.|||+..|+.                            |..|||||
T Consensus       311 l~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPE  390 (513)
T KOG2052|consen  311 LKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPE  390 (513)
T ss_pred             HHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChH
Confidence            688999999999999633     567999999999999998765                            88999999


Q ss_pred             cccCC----CC--ccccceechhHHHHHHhhCC----------CccccccccCCCCchhHHHHHHhhcCccchhhhhccc
Q 022858           49 TWMSF----PV--THKCDVRSFGMLLFEILGRR----------RMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGM  112 (291)
Q Consensus        49 ~~~~~----~~--~~~~Dv~s~G~~l~elltg~----------~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (291)
                      ++...    .+  -..+||||||.++||+..+.          .||.+.-+.  .+++ +...+.+....+...++..  
T Consensus       391 vLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~--DPs~-eeMrkVVCv~~~RP~ipnr--  465 (513)
T KOG2052|consen  391 VLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPS--DPSF-EEMRKVVCVQKLRPNIPNR--  465 (513)
T ss_pred             HhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCC--CCCH-HHHhcceeecccCCCCCcc--
Confidence            98753    11  13589999999999987422          355443322  1111 2222222222222222111  


Q ss_pred             ccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhccc
Q 022858          113 EKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       113 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~  154 (291)
                       -...+.+..+.++|..||..+|..|-|+-.|  -..|.++.
T Consensus       466 -W~s~~~l~~m~klMkeCW~~Np~aRltALri--KKtl~~l~  504 (513)
T KOG2052|consen  466 -WKSDPALRVMAKLMKECWYANPAARLTALRI--KKTLAKLS  504 (513)
T ss_pred             -cccCHHHHHHHHHHHHhhcCCchhhhHHHHH--HHHHHHHh
Confidence             1234677899999999999999999997666  55555443

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.69  E-value=5.1e-18  Score=137.36  Aligned_cols=138  Identities=15%  Similarity=0.178  Sum_probs=95.5

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccCC-
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMSF-   53 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~~-   53 (291)
                      ++..++..||.|+|.   ..|+|||+|+.|+|++.++.                            |.+|.+||.+.+. 
T Consensus       128 k~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r  204 (376)
T KOG0669|consen  128 KVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDR  204 (376)
T ss_pred             HHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhccc
Confidence            567899999999999   99999999999999998654                            8899999999875 


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccccCCCCchhHH--------HHHHhhcCccchhhhhc-ccccc---hHHHH-
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKW--------VWKKLEKGEFQDLIIVC-GMEKN---NKEKA-  120 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-~~~~~---~~~~~-  120 (291)
                      .|+++.|||+-||++.||.|+.+.+.+....+. ..+...        +|+....-.+.+.+.-. .....   .++.. 
T Consensus       205 ~yg~~iDiWgAgCimaeMwtrspimqgnteqqq-l~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~k  283 (376)
T KOG0669|consen  205 EYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQ-LHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLK  283 (376)
T ss_pred             ccCCcchhHhHHHHHHHHHccCccccCChHHHH-HHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcc
Confidence            789999999999999999999998876654311 111111        11111111111111000 00000   11111 


Q ss_pred             -----HHHHHHHHHccccCCCCCCCCCcc
Q 022858          121 -----ERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       121 -----~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                           ...++++...+..||.+|+.+.++
T Consensus       284 p~~kd~~a~dLle~ll~~DP~kR~~ad~a  312 (376)
T KOG0669|consen  284 PYVKDDEALDLLEKLLKLDPTKRIDADQA  312 (376)
T ss_pred             cccCChhHHHHHHHHhccCcccCcchHhh
Confidence                 255778889999999999999988

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.69  E-value=5.9e-17  Score=139.48  Aligned_cols=117  Identities=23%  Similarity=0.301  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcccc
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      ++.+||-||-|||+   ++||.||||..||+||.++.                        |+-|+|||.+...+|..++
T Consensus       455 YAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksv  531 (683)
T KOG0696|consen  455 YAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSV  531 (683)
T ss_pred             hhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccch
Confidence            57899999999999   99999999999999997754                        9999999999999999999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      |-||||++||||+.|++||++....        .+.+.+.+.+          -.++.....+...+...-+-..|.+|-
T Consensus       532 DWWa~GVLLyEmlaGQpPFdGeDE~--------elF~aI~ehn----------vsyPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  532 DWWAFGVLLYEMLAGQPPFDGEDED--------ELFQAIMEHN----------VSYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             hHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHHcc----------CcCcccccHHHHHHHHHHhhcCCcccc
Confidence            9999999999999999999877643        1222222211          123344456666777778889999996


Q ss_pred             CC
Q 022858          140 SM  141 (291)
Q Consensus       140 s~  141 (291)
                      ..
T Consensus       594 Gc  595 (683)
T KOG0696|consen  594 GC  595 (683)
T ss_pred             CC
Confidence            54

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.68  E-value=3.1e-17  Score=152.26  Aligned_cols=125  Identities=21%  Similarity=0.145  Sum_probs=101.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-----
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-----   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-----   52 (291)
                      .-|++.++.||.+||.   +.++|||||-.||||+.++.                        |+.|||||++.-     
T Consensus       126 aYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d  202 (953)
T KOG0587|consen  126 AYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPD  202 (953)
T ss_pred             HHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCC
Confidence            3588999999999999   99999999999999998865                        999999999873     


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..|+.++|+||+|++..||--|.+|+.+..+.          ...     +.-.-.|+.....+..-.+++.+++..|+.
T Consensus       203 ~tyd~R~D~WsLGITaIEladG~PPl~DmHPm----------raL-----F~IpRNPPPkLkrp~kWs~~FndFIs~cL~  267 (953)
T KOG0587|consen  203 ATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM----------RAL-----FLIPRNPPPKLKRPKKWSKKFNDFISTCLV  267 (953)
T ss_pred             CCcccccchhhccceeehhcCCCCCccCcchh----------hhh-----ccCCCCCCccccchhhHHHHHHHHHHHHHh
Confidence            35788999999999999999999998776653          111     111112333344456677899999999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .|-.+||++.++
T Consensus       268 Kd~e~RP~~~~l  279 (953)
T KOG0587|consen  268 KDYEQRPSTEEL  279 (953)
T ss_pred             hccccCcchhhh
Confidence            999999999887

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.68  E-value=3.5e-17  Score=136.95  Aligned_cols=115  Identities=20%  Similarity=0.233  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCccccc
Q 022858            5 AIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         5 ~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      -.+|..||.|||+   .+||.||||.+|+|||.++.                        ||.|+|||++....|...+|
T Consensus       274 GaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVD  350 (516)
T KOG0690|consen  274 GAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVD  350 (516)
T ss_pred             hHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceee
Confidence            4579999999999   99999999999999998864                        99999999999999999999


Q ss_pred             eechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCC
Q 022858           61 VRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPS  140 (291)
Q Consensus        61 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs  140 (291)
                      -|.+|+++|||++|+.||......        .+...+--+   ++       ..+.....+...|....+..||.+|-.
T Consensus       351 WWG~GVVMYEMmCGRLPFyn~dh~--------kLFeLIl~e---d~-------kFPr~ls~eAktLLsGLL~kdP~kRLG  412 (516)
T KOG0690|consen  351 WWGVGVVMYEMMCGRLPFYNKDHE--------KLFELILME---DL-------KFPRTLSPEAKTLLSGLLKKDPKKRLG  412 (516)
T ss_pred             hhhhhHHHHHHHhccCcccccchh--------HHHHHHHhh---hc-------cCCccCCHHHHHHHHHHhhcChHhhcC
Confidence            999999999999999999866532        011111100   11       112222334455666778899999954

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.67  E-value=2.9e-17  Score=137.03  Aligned_cols=139  Identities=22%  Similarity=0.208  Sum_probs=95.4

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCcccc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      .|+.|++.|+.|||+   .+|+||||||+||++..+..                       +..|.|||++.+..+...+
T Consensus       122 ~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~v  198 (369)
T KOG0665|consen  122 YILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENV  198 (369)
T ss_pred             HHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccc
Confidence            578899999999999   99999999999999986543                       6789999999998899999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCC-----------CCchhHHHHHHh----h------cCccchhhhhc---ccccc
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSG-----------FPSGFKWVWKKL----E------KGEFQDLIIVC---GMEKN  115 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~-----------~~~~~~~~~~~~----~------~~~~~~~~~~~---~~~~~  115 (291)
                      ||||.||++.||++|...|.+....+.           ..++.+.+.+..    .      .-.+.+.+...   ...+.
T Consensus       199 diwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~  278 (369)
T KOG0665|consen  199 DIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEG  278 (369)
T ss_pred             hhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccC
Confidence            999999999999999988764432110           111111111110    0      00111111000   00111


Q ss_pred             hHHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          116 NKEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       116 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .+-...-..+++.++|-.+|++|.++.++
T Consensus       279 ~~~~~~~ardll~~MLvi~pe~Risv~da  307 (369)
T KOG0665|consen  279 SKLDCSLARDLLSKMLVIDPEKRISVDDA  307 (369)
T ss_pred             CccchHHHHHHHHHhhccChhhcccHHHH
Confidence            12223445678899999999999999888

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.66  E-value=6.8e-17  Score=148.12  Aligned_cols=132  Identities=19%  Similarity=0.196  Sum_probs=85.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCC--
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFP--   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~--   54 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.+..                         ++.|+|||.+....  
T Consensus       312 ~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~  388 (507)
T PLN03224        312 KGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSC  388 (507)
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCC
Confidence            3578899999999999   89999999999999986542                         56799999876422  


Q ss_pred             --------------------CccccceechhHHHHHHhhCCC-ccccccccCCCCchhHHH---HHHhhcCccchhhhhc
Q 022858           55 --------------------VTHKCDVRSFGMLLFEILGRRR-MRTCQKARSGFPSGFKWV---WKKLEKGEFQDLIIVC  110 (291)
Q Consensus        55 --------------------~~~~~Dv~s~G~~l~elltg~~-p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  110 (291)
                                          ...+.||||+||+++||++|.. |+................   +........ ++    
T Consensus       389 ~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~-~~----  463 (507)
T PLN03224        389 PRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKY-DF----  463 (507)
T ss_pred             CccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCC-Cc----
Confidence                                1134699999999999999875 554322110000000000   111111110 00    


Q ss_pred             ccccchHHHHHHHHHHHHHccccCC---CCCCCCCcc
Q 022858          111 GMEKNNKEKAERMALVALWRVQYKP---EAMPSMTVR  144 (291)
Q Consensus       111 ~~~~~~~~~~~~~~~l~~~cl~~~p---~~RPs~~~v  144 (291)
                         ...........+++.+++..+|   .+|+|+.|+
T Consensus       464 ---~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~ea  497 (507)
T PLN03224        464 ---SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQA  497 (507)
T ss_pred             ---ccccccChHHHHHHHHHhccCCCCcccCCCHHHH
Confidence               0111223566778888888765   689999988

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=1.4e-16  Score=151.48  Aligned_cols=78  Identities=29%  Similarity=0.423  Sum_probs=69.5

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccC-----C
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMS-----F   53 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~-----~   53 (291)
                      ++..|..||+-||+   .++|||||||.|||||.++.                         ||-|.+||++..     +
T Consensus       180 Y~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g  256 (1317)
T KOG0612|consen  180 YTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKG  256 (1317)
T ss_pred             HHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCcc
Confidence            45679999999999   99999999999999997654                         999999999862     5


Q ss_pred             CCccccceechhHHHHHHhhCCCcccccccc
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKAR   84 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~   84 (291)
                      .|...+|-||+||++|||+.|..||......
T Consensus       257 ~yG~ecDwWSlGV~~YEMlyG~TPFYadslv  287 (1317)
T KOG0612|consen  257 EYGRECDWWSLGVFMYEMLYGETPFYADSLV  287 (1317)
T ss_pred             ccCCccchhhhHHHHHHHHcCCCcchHHHHH
Confidence            7899999999999999999999999876543

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=2.2e-16  Score=132.71  Aligned_cols=123  Identities=19%  Similarity=0.234  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCccccc
Q 022858            5 AIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         5 ~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      ..+|+.||.|||+   .+||.||||..|+|+|..+.                        |+.|.|||.+.+..|..++|
T Consensus       357 s~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvd  433 (593)
T KOG0695|consen  357 SAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVD  433 (593)
T ss_pred             hHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceeh
Confidence            4578999999999   99999999999999997653                        89999999999999999999


Q ss_pred             eechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCC
Q 022858           61 VRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPS  140 (291)
Q Consensus        61 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs  140 (291)
                      -|++|++++||+.|+.||+.-.......+..+.+.+.+-+.++          ..+.....+...+...-+..||..|-.
T Consensus       434 wwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi----------riprslsvkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  434 WWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI----------RIPRSLSVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             HHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc----------cccceeehhhHHHHHHhhcCCcHHhcC
Confidence            9999999999999999998766554555555555555443222          112222344555666778899998854

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.64  E-value=5.7e-17  Score=145.58  Aligned_cols=127  Identities=18%  Similarity=0.156  Sum_probs=96.3

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCc-cc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVT-HK   58 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~-~~   58 (291)
                      .++.|+.+|++|||+   +.|||||||.+||||+.++.                       ++.|.|||.+.+..|+ ++
T Consensus       159 ~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe  235 (596)
T KOG0586|consen  159 AKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPE  235 (596)
T ss_pred             hhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcc
Confidence            357899999999999   99999999999999998874                       8899999999987765 67


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|+||+|+++|-|+.|..||++....+-        .+....+.        ..  .+--....+-+++.+.+-.+|.+|
T Consensus       236 ~D~Wslgvvly~LV~GsLPFDG~~lk~L--------r~rvl~gk--------~r--Ip~~ms~dce~lLrk~lvl~Pskr  297 (596)
T KOG0586|consen  236 VDIWSLGVVLYALVEGSLPFDGQNLKEL--------RPRVLRGK--------YR--IPFYMSCDCEDLLRKFLVLNPSKR  297 (596)
T ss_pred             eehhhhhhhheeeeecccccCCcccccc--------cchheeee--------ec--ccceeechhHHHHHHhhccCcccc
Confidence            9999999999999999999987654311        11111110        01  111123455677778889999999


Q ss_pred             CCCCccchhhhh
Q 022858          139 PSMTVRPAKFML  150 (291)
Q Consensus       139 Ps~~~v~~~~~L  150 (291)
                      +++.++..-.++
T Consensus       298 ~~~dqim~~~W~  309 (596)
T KOG0586|consen  298 GPCDQIMKDRWR  309 (596)
T ss_pred             CCHHHhhhhccc
Confidence            999999433333

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=1.7e-16  Score=130.02  Aligned_cols=78  Identities=29%  Similarity=0.425  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCC-CCcc
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSF-PVTH   57 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~-~~~~   57 (291)
                      ++.||++||.|||+   .+|+||||||.|.|++.|-.                         |-.|.|||.+.+. .|+.
T Consensus       161 FlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~  237 (449)
T KOG0664|consen  161 FVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTG  237 (449)
T ss_pred             hHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcC
Confidence            56899999999999   99999999999999998743                         7789999999985 6999


Q ss_pred             ccceechhHHHHHHhhCCCcccccccc
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKAR   84 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~   84 (291)
                      ..||||.||++.||+.++..|....+.
T Consensus       238 AvDiWSVGCIFaELLgRrILFQAq~Pi  264 (449)
T KOG0664|consen  238 AVDIWSVGCIFAELLQRKILFQAAGPI  264 (449)
T ss_pred             ccceehhhHHHHHHHhhhhhhhccChH
Confidence            999999999999999998888766544

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.64  E-value=1.8e-16  Score=129.92  Aligned_cols=133  Identities=17%  Similarity=0.184  Sum_probs=103.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------CCccccCccccCCCCc---ccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------TPGYAAPETWMSFPVT---HKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------t~~y~aPE~~~~~~~~---~~~   59 (291)
                      ++++.++|+|++|||+.- +-|.-..|.+..+++|++..                   .+.||+||.+...+-+   ..+
T Consensus       292 v~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pawmspealqrkped~n~raa  370 (448)
T KOG0195|consen  292 VRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAA  370 (448)
T ss_pred             HHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeeeeccccccCcccCCHHHHhcCchhcchhhh
Confidence            578999999999999952 33444579999999998865                   8899999999875433   458


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      |+|||++++|||.|+..||.+..+.+...                .+....+....++.....+.+++.-|+..||.+||
T Consensus       371 dmwsfaillwel~trevpfadlspmecgm----------------kialeglrv~ippgis~hm~klm~icmnedpgkrp  434 (448)
T KOG0195|consen  371 DMWSFAILLWELNTREVPFADLSPMECGM----------------KIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRP  434 (448)
T ss_pred             hHHHHHHHHHHhhccccccccCCchhhhh----------------hhhhccccccCCCCccHHHHHHHHHHhcCCCCcCC
Confidence            99999999999999999998877653322                11112233344555668889999999999999999


Q ss_pred             CCCccchhhhhhcc
Q 022858          140 SMTVRPAKFMLHGS  153 (291)
Q Consensus       140 s~~~v~~~~~L~~~  153 (291)
                      .+.+|  +..|+..
T Consensus       435 kfdmi--vpilekm  446 (448)
T KOG0195|consen  435 KFDMI--VPILEKM  446 (448)
T ss_pred             Cccee--hhhHHHh
Confidence            99999  8888764

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.63  E-value=1.8e-16  Score=144.48  Aligned_cols=79  Identities=24%  Similarity=0.283  Sum_probs=69.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-----------C----------------CCccccCccccC-C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-----------W----------------TPGYAAPETWMS-F   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-----------~----------------t~~y~aPE~~~~-~   53 (291)
                      +.++.+++.||.|||+   ++|+||||||.||++-...           +                |..|.+||++.. .
T Consensus       123 l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~  199 (732)
T KOG4250|consen  123 LDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQK  199 (732)
T ss_pred             HHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhcc
Confidence            5688999999999998   9999999999999984221           1                889999999984 7


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccc
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKA   83 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~   83 (291)
                      .|+..+|.|||||++|+..||..||.....
T Consensus       200 ~y~~tVDLWS~GvtlY~caTG~lPF~p~~~  229 (732)
T KOG4250|consen  200 KYTATVDLWSFGVTLYECATGELPFIPFGG  229 (732)
T ss_pred             CcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence            899999999999999999999999975543

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.63  E-value=6.4e-16  Score=139.32  Aligned_cols=87  Identities=31%  Similarity=0.431  Sum_probs=77.7

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------------------------
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------------------------   40 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------------------------   40 (291)
                      ++.+++.|+++.|.   +++|||||||+|||||.++.                                           
T Consensus       734 YIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~  810 (1034)
T KOG0608|consen  734 YIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISK  810 (1034)
T ss_pred             HHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccc
Confidence            34578999999999   99999999999999997653                                           


Q ss_pred             -----------------------CCccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHH
Q 022858           41 -----------------------TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKW   93 (291)
Q Consensus        41 -----------------------t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~   93 (291)
                                             |+-|+|||++....++..+|-||.||+||||+.|+.||....+.+....+.+|
T Consensus       811 ~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw  886 (1034)
T KOG0608|consen  811 CLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINW  886 (1034)
T ss_pred             cchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeeh
Confidence                                   88999999999999999999999999999999999999988887666656665

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.63  E-value=1.1e-16  Score=153.08  Aligned_cols=95  Identities=16%  Similarity=0.165  Sum_probs=64.8

Q ss_pred             CCccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHH
Q 022858           41 TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKA  120 (291)
Q Consensus        41 t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (291)
                      |+.|+|||++.+..++.++|||||||++|||++|+.||......       ........ .....       ........
T Consensus       543 T~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~-------~~~~~il~-~~~~~-------p~~~~~~~  607 (669)
T cd05610         543 TPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQ-------QVFQNILN-RDIPW-------PEGEEKLS  607 (669)
T ss_pred             CccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHh-cCCCC-------CcccccCC
Confidence            44689999988888999999999999999999999998654321       11111111 11100       01111234


Q ss_pred             HHHHHHHHHccccCCCCCCCCCccchhhhh
Q 022858          121 ERMALVALWRVQYKPEAMPSMTVRPAKFML  150 (291)
Q Consensus       121 ~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L  150 (291)
                      ..+.+++.+||..||.+||++.++.....+
T Consensus       608 ~~~~~~l~~lL~~dP~~R~ta~e~l~h~~~  637 (669)
T cd05610         608 VNAQNAIEILLTMDPTKRAGLKELKQHPLF  637 (669)
T ss_pred             HHHHHHHHHHcccChhHCcCHHHHHhCHhh
Confidence            567888899999999999999999433334

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.61  E-value=1.1e-15  Score=122.44  Aligned_cols=136  Identities=15%  Similarity=0.208  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCccc
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVTHK   58 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~~~   58 (291)
                      .+.+++.||.|+|+   ++|+|||+||.|+++|....                        +..|--||.+.+ ..|+.+
T Consensus       137 Y~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYS  213 (338)
T KOG0668|consen  137 YIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYS  213 (338)
T ss_pred             HHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhcccc
Confidence            56789999999999   99999999999999996532                        556788998876 468889


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHH--------HHHHhhc------Cccchhhhhccc-------ccchH
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKW--------VWKKLEK------GEFQDLIIVCGM-------EKNNK  117 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~--------~~~~~~~------~~~~~~~~~~~~-------~~~~~  117 (291)
                      .|+|||||++..|+..+.||......  +..+...        +...+..      ..+.+++.....       .....
T Consensus       214 LD~WS~GcmlA~miFrkepFFhG~dN--~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~  291 (338)
T KOG0668|consen  214 LDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQ  291 (338)
T ss_pred             HHHHHHHHHHHHHHhccCcccCCCCC--HHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCcccc
Confidence            99999999999999999998654432  1111110        0111110      011111111000       00111


Q ss_pred             HH-HHHHHHHHHHccccCCCCCCCCCcc
Q 022858          118 EK-AERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       118 ~~-~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .. ..+.+++..+.+.+|-.+|+|+.|.
T Consensus       292 hl~~peaiDlldklLrYDHqeRlTakEa  319 (338)
T KOG0668|consen  292 HLVSPEAIDLLDKLLRYDHQERLTAKEA  319 (338)
T ss_pred             ccCChHHHHHHHHHHhhccccccchHHH
Confidence            11 2567888889999999999999888

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.60  E-value=7e-16  Score=125.46  Aligned_cols=91  Identities=36%  Similarity=0.507  Sum_probs=81.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc-CCC------------------------CCccccCccccCC-CC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV-KFW------------------------TPGYAAPETWMSF-PV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~-~~~------------------------t~~y~aPE~~~~~-~~   55 (291)
                      +.++.+++.+|+|||+   .+++|+||+|.||+++. +..                        ...|++||..... ..
T Consensus        95 ~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  171 (215)
T cd00180          95 LRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYY  171 (215)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCC
Confidence            5688999999999999   89999999999999998 332                        4578999988876 78


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++|+|++|++++++                                                 ..+.+++..|++.+|
T Consensus       172 ~~~~D~~~lg~~~~~l-------------------------------------------------~~~~~~l~~~l~~~p  202 (215)
T cd00180         172 SEKSDIWSLGVILYEL-------------------------------------------------PELKDLIRKMLQKDP  202 (215)
T ss_pred             CchhhhHHHHHHHHHH-------------------------------------------------HHHHHHHHHHhhCCc
Confidence            8899999999999998                                                 467888999999999


Q ss_pred             CCCCCCCcc
Q 022858          136 EAMPSMTVR  144 (291)
Q Consensus       136 ~~RPs~~~v  144 (291)
                      ++||++.++
T Consensus       203 ~~R~~~~~l  211 (215)
T cd00180         203 EKRPSAKEI  211 (215)
T ss_pred             ccCcCHHHH
Confidence            999999888

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.60  E-value=1.7e-16  Score=140.38  Aligned_cols=122  Identities=20%  Similarity=0.211  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCCcc
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ++.||+.||.|||.   ++|+|+||||+||||.....                          |+.|+|||++.++.|+.
T Consensus       669 lvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNr  745 (888)
T KOG4236|consen  669 LVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNR  745 (888)
T ss_pred             HHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccc
Confidence            45799999999999   99999999999999975422                          99999999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ..|+||.|+++|--++|..||......      .+    .+....+   .-|   .....+.....++++...+|..-.+
T Consensus       746 SLDMWSVGVIiYVsLSGTFPFNEdEdI------nd----QIQNAaF---MyP---p~PW~eis~~AidlIn~LLqVkm~k  809 (888)
T KOG4236|consen  746 SLDMWSVGVIIYVSLSGTFPFNEDEDI------ND----QIQNAAF---MYP---PNPWSEISPEAIDLINNLLQVKMRK  809 (888)
T ss_pred             cccceeeeEEEEEEecccccCCCccch------hH----Hhhcccc---ccC---CCchhhcCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999655421      11    1111111   111   1223455567788888889998899


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      |.|..+.
T Consensus       810 Rysvdk~  816 (888)
T KOG4236|consen  810 RYSVDKS  816 (888)
T ss_pred             hcchHhh
Confidence            9987666

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.60  E-value=1.1e-15  Score=132.69  Aligned_cols=129  Identities=19%  Similarity=0.218  Sum_probs=90.5

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------------CCccccCc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------------TPGYAAPE   48 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------------t~~y~aPE   48 (291)
                      .|++||+.||.||.+. +++|||-||||.||||-....                                  |.+|++||
T Consensus       572 SIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPE  650 (775)
T KOG1151|consen  572 SIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPE  650 (775)
T ss_pred             HHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcc
Confidence            6899999999999975 489999999999999853211                                  88999999


Q ss_pred             cccCC----CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHH
Q 022858           49 TWMSF----PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMA  124 (291)
Q Consensus        49 ~~~~~----~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (291)
                      .+.-+    +++.|+||||.||++|+.+.|+.||...-..+.   ++       ....+....  ...-+..+....+..
T Consensus       651 cFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQd---IL-------qeNTIlkAt--EVqFP~KPvVsseAk  718 (775)
T KOG1151|consen  651 CFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQD---IL-------QENTILKAT--EVQFPPKPVVSSEAK  718 (775)
T ss_pred             eeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHH---HH-------hhhchhcce--eccCCCCCccCHHHH
Confidence            88754    578999999999999999999999965543211   11       111110000  000111122234556


Q ss_pred             HHHHHccccCCCCCCCCCcc
Q 022858          125 LVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       125 ~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .++.+|+++.-++|....++
T Consensus       719 aFIRRCLaYRKeDR~DV~qL  738 (775)
T KOG1151|consen  719 AFIRRCLAYRKEDRIDVQQL  738 (775)
T ss_pred             HHHHHHHHhhhhhhhhHHHH
Confidence            78899999999998875554

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.60  E-value=2e-16  Score=139.56  Aligned_cols=139  Identities=20%  Similarity=0.219  Sum_probs=101.4

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCcccc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      .++.|+..||..|-.   .+|+|.||||.|||++++..                       +-.|.|||.+.+.+|+...
T Consensus       540 sYaqQLflALklLK~---c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~i  616 (752)
T KOG0670|consen  540 SYAQQLFLALKLLKK---CGVLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPI  616 (752)
T ss_pred             HHHHHHHHHHHHHHh---cCeeecccCccceEeccCcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCc
Confidence            478999999999999   99999999999999997643                       4469999999999999999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHH----HHHHhhcCc---------------------------------
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKW----VWKKLEKGE---------------------------------  102 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~---------------------------------  102 (291)
                      |+||.||+||||.||+..|.+..+.+....+.+.    ..+++..+.                                 
T Consensus       617 D~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vk  696 (752)
T KOG0670|consen  617 DTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVK  696 (752)
T ss_pred             cceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccC
Confidence            9999999999999999999877655321100000    001111111                                 


Q ss_pred             ----cch-hhhhcccccchHHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          103 ----FQD-LIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       103 ----~~~-~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                          +.. ++.........+.....+.+|...|+..||.+|-+..+.
T Consensus       697 Ptkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqA  743 (752)
T KOG0670|consen  697 PTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQA  743 (752)
T ss_pred             cchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHH
Confidence                000 111111223345567888899999999999999998877

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.52  E-value=1.5e-14  Score=111.91  Aligned_cols=76  Identities=20%  Similarity=0.310  Sum_probs=66.6

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCcc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVTH   57 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~~   57 (291)
                      +++.|+++||.|+|+   +++.|||+||+|.|++.|+.                        |.+|.+|.++.+. -|++
T Consensus       105 sfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~t  181 (292)
T KOG0662|consen  105 SFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST  181 (292)
T ss_pred             HHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhcc
Confidence            467899999999999   99999999999999998876                        8899999999885 5889


Q ss_pred             ccceechhHHHHHHh-hCCCccccc
Q 022858           58 KCDVRSFGMLLFEIL-GRRRMRTCQ   81 (291)
Q Consensus        58 ~~Dv~s~G~~l~ell-tg~~p~~~~   81 (291)
                      +.|+||-||++.|+. .|++.|.+.
T Consensus       182 sidmwsagcifaelanagrplfpg~  206 (292)
T KOG0662|consen  182 SIDMWSAGCIFAELANAGRPLFPGN  206 (292)
T ss_pred             chHhhhcchHHHHHhhcCCCCCCCC
Confidence            999999999999998 466555443

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.52  E-value=6.5e-15  Score=120.65  Aligned_cols=129  Identities=19%  Similarity=0.221  Sum_probs=87.6

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc-CCC----------------------CCccccCccccCC-----C
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV-KFW----------------------TPGYAAPETWMSF-----P   54 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~-~~~----------------------t~~y~aPE~~~~~-----~   54 (291)
                      +++.|+++|++|||+   +++||||||.+|||+-. ++.                      +..|.+||.....     .
T Consensus       125 ~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~  201 (378)
T KOG1345|consen  125 KVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLV  201 (378)
T ss_pred             HHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccceE
Confidence            578999999999999   99999999999999843 221                      6678999977532     4


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      .++.+|||.|||+++..+||..|.......  .....+  +..+..+....+  |    ........++..+-.+-+..+
T Consensus       202 ~~ps~D~WqfGIi~f~cltG~~PWQka~~~--d~~Y~~--~~~w~~rk~~~~--P----~~F~~fs~~a~r~Fkk~lt~~  271 (378)
T KOG1345|consen  202 VNPSTDIWQFGIIFFYCLTGKFPWQKASIM--DKPYWE--WEQWLKRKNPAL--P----KKFNPFSEKALRLFKKSLTPR  271 (378)
T ss_pred             ecccccchheeeeeeeeecCCCcchhhhcc--CchHHH--HHHHhcccCccC--c----hhhcccCHHHHHHHHHhcCCc
Confidence            567899999999999999999999855433  222223  233333222211  1    111222345556666778888


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      +++|=...++
T Consensus       272 ~~drcki~~~  281 (378)
T KOG1345|consen  272 FKDRCKIWTA  281 (378)
T ss_pred             ccccchhHHH
Confidence            8888443333

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.47  E-value=2.2e-14  Score=134.40  Aligned_cols=140  Identities=16%  Similarity=0.104  Sum_probs=102.9

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccCCC
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~~~   54 (291)
                      .+++|+..|+.|+|+   .+|.|||+|++|++++.++.                            +-.|+|||.+....
T Consensus       424 c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~  500 (601)
T KOG0590|consen  424 CFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKE  500 (601)
T ss_pred             HHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccc
Confidence            467899999999999   99999999999999987743                            67899999999999


Q ss_pred             Cccc-cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHK-CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~-~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      |++. .||||.|+++..|++|+.|+..........  ..    ......   ..+...........+.+...++.++++.
T Consensus       501 ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~--~~----~~~~~~---~~~~~~~~~~~~~lp~~~~~~~~~~l~~  571 (601)
T KOG0590|consen  501 YDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF--KT----NNYSDQ---RNIFEGPNRLLSLLPRETRIIIYRMLQL  571 (601)
T ss_pred             cCcchhhhhhccceEEEEecCCCccccccccccch--hh----hccccc---cccccChHHHHHhchhhHHHHHHHHccC
Confidence            9876 799999999999999999986655432110  00    000000   0000011222334567778889999999


Q ss_pred             CCCCCCCCCccchhhhhhccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~  154 (291)
                      +|.+|-++.+|+.-.+++.+.
T Consensus       572 ~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  572 DPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             ChhheecHHHHhhChHhhhcc
Confidence            999999999995555666554

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.45  E-value=3.3e-14  Score=120.56  Aligned_cols=112  Identities=21%  Similarity=0.256  Sum_probs=80.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccC--------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMS--------   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~--------   52 (291)
                      +.+..|+.+.+++||+   .++||+||||+|++++.++.                     +..|.+||....        
T Consensus       148 l~lT~Q~I~lvA~Lh~---~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~  224 (288)
T PF14531_consen  148 LSLTVQMIRLVANLHS---YGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNN  224 (288)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSE
T ss_pred             HHHHHHHHHHHHHHhh---cceEecccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCccc
Confidence            5677899999999999   99999999999999999876                     667899987643        


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      -.++.+.|.|++|+++|.+.++..||...........                     ....+. +.+..+..|+...++
T Consensus       225 ~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~---------------------~f~~C~-~~Pe~v~~LI~~lL~  282 (288)
T PF14531_consen  225 APYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW---------------------DFSRCR-DMPEPVQFLIRGLLQ  282 (288)
T ss_dssp             EEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG---------------------GGTTSS----HHHHHHHHHHT-
T ss_pred             ceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc---------------------cchhcC-CcCHHHHHHHHHHcc
Confidence            2578889999999999999999999986654321110                     111222 556778888899999


Q ss_pred             cCCCCC
Q 022858          133 YKPEAM  138 (291)
Q Consensus       133 ~~p~~R  138 (291)
                      .+|.+|
T Consensus       283 ~~~~~R  288 (288)
T PF14531_consen  283 RNPEDR  288 (288)
T ss_dssp             SSGGGS
T ss_pred             CCcccC
Confidence            999988

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.45  E-value=4.9e-14  Score=121.70  Aligned_cols=79  Identities=30%  Similarity=0.442  Sum_probs=67.7

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------------------------
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------------------------   40 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------------------------   40 (291)
                      .++..+..||.++|.   .+||||||||+|+|.+....                                          
T Consensus       136 ~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~  212 (418)
T KOG1167|consen  136 WYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQS  212 (418)
T ss_pred             HHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccc
Confidence            467889999999999   99999999999999863211                                          


Q ss_pred             ---------------------------CCccccCccccCC-CCccccceechhHHHHHHhhCCCcccccccc
Q 022858           41 ---------------------------TPGYAAPETWMSF-PVTHKCDVRSFGMLLFEILGRRRMRTCQKAR   84 (291)
Q Consensus        41 ---------------------------t~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~   84 (291)
                                                 |++|.|||++... .-++++||||-|++++-+++++.||......
T Consensus       213 ~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd  284 (418)
T KOG1167|consen  213 VATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDD  284 (418)
T ss_pred             cccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccc
Confidence                                       9999999998864 5678999999999999999999998665543

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.41  E-value=1.9e-13  Score=123.12  Aligned_cols=140  Identities=22%  Similarity=0.219  Sum_probs=97.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCe-EeecCCCCcEEEccCCC--------------------------CCccccCccccCC-
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQI-IHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSF-   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~i-vH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~-   53 (291)
                      ..++++|+.||+|||.   -+| .|+.+++.|.++|..+.                          ...|.|||.+... 
T Consensus        51 ~s~~rdi~~Gl~ylh~---s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~  127 (484)
T KOG1023|consen   51 LSFIRDISKGLAYLHN---SPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGAL  127 (484)
T ss_pred             HHHHHHHHHHHHHHhc---CcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccc
Confidence            4578899999999999   454 99999999999986643                          3458999998863 


Q ss_pred             ------CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHH
Q 022858           54 ------PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVA  127 (291)
Q Consensus        54 ------~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  127 (291)
                            ..+.+.||||||++++|+++.+.||.........    ..+...+.. .......|... ... +....+..++
T Consensus       128 ~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~----~eii~~~~~-~~~~~~rP~i~-~~~-e~~~~l~~l~  200 (484)
T KOG1023|consen  128 SQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDP----DEIILRVKK-GGSNPFRPSIE-LLN-ELPPELLLLV  200 (484)
T ss_pred             cccccccccccCCeehHHHHHHHHHhccCccccccccCCh----HHHHHHHHh-cCCCCcCcchh-hhh-hcchHHHHHH
Confidence                  1467799999999999999999999876544222    112222222 01111111111 011 3344789999


Q ss_pred             HHccccCCCCCCCCCccchhhhhhcc
Q 022858          128 LWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       128 ~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      ..||..+|.+||++.+|  -..++..
T Consensus       201 ~~cw~e~P~~rPs~~~i--~~~~~~~  224 (484)
T KOG1023|consen  201 ARCWEEIPEKRPSIEQI--RSKLLTI  224 (484)
T ss_pred             HHhcccChhhCccHHHH--Hhhhhhh
Confidence            99999999999999998  5554443

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.39  E-value=3e-13  Score=111.67  Aligned_cols=76  Identities=32%  Similarity=0.404  Sum_probs=66.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccc-cCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETW-MSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~-~~~~~   55 (291)
                      ..++.+++.+|.|||.   .+++|+||+|+||+++.+..                         +..|++||.. ....+
T Consensus       101 ~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  177 (225)
T smart00221      101 RFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGY  177 (225)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCC
Confidence            4678899999999999   89999999999999986432                         3459999998 55677


Q ss_pred             ccccceechhHHHHHHhhCCCcccc
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTC   80 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~   80 (291)
                      +.++|+|+||++++|+++|+.||..
T Consensus       178 ~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      178 GEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             CchhhHHHHHHHHHHHHHCCCCccc
Confidence            8899999999999999999999965

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.36  E-value=1.5e-13  Score=123.02  Aligned_cols=74  Identities=35%  Similarity=0.489  Sum_probs=67.3

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCccc-c
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHK-C   59 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~-~   59 (291)
                      -|++||+.|+++||+   .+|||||||-+|+.++.++.                      |..|.|||++.+.+|-.| -
T Consensus       674 ~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~q  750 (772)
T KOG1152|consen  674 LIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQ  750 (772)
T ss_pred             HHHHHHHhccccccc---cCceecccccccEEEecCCeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcc
Confidence            378999999999999   99999999999999998864                      899999999999887655 7


Q ss_pred             ceechhHHHHHHhhCCCccc
Q 022858           60 DVRSFGMLLFEILGRRRMRT   79 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~   79 (291)
                      |||++|++||.++....||.
T Consensus       751 diwalgillytivykenpyy  770 (772)
T KOG1152|consen  751 DIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             hhhhhhheeeEEEeccCCCc
Confidence            99999999999998888875

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.34  E-value=2e-13  Score=121.28  Aligned_cols=117  Identities=20%  Similarity=0.171  Sum_probs=84.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------------CCccccCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------------TPGYAAPETWM   51 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------------t~~y~aPE~~~   51 (291)
                      ++++.|++.|++|      ++.+|||+||.||+...+..                              |..||+||++.
T Consensus       362 ~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~  435 (516)
T KOG1033|consen  362 LDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIR  435 (516)
T ss_pred             HHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHh
Confidence            5688899999999      58899999999999865431                              88999999999


Q ss_pred             CCCCccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHc
Q 022858           52 SFPVTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWR  130 (291)
Q Consensus        52 ~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c  130 (291)
                      +..|+.|+||||+|++|+|++. -...++...           ....+..+.++...         ......-..+..+.
T Consensus       436 g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~-----------t~~d~r~g~ip~~~---------~~d~p~e~~ll~~l  495 (516)
T KOG1033|consen  436 GQQYSEKVDIYALGLILAELLIQFSTQFERIA-----------TLTDIRDGIIPPEF---------LQDYPEEYTLLQQL  495 (516)
T ss_pred             hhhhhhhcchhhHHHHHHHHHHHhccHHHHHH-----------hhhhhhcCCCChHH---------hhcCcHHHHHHHHh
Confidence            9999999999999999999997 333333221           12223333333111         11112335677889


Q ss_pred             cccCCCCCCCCCcc
Q 022858          131 VQYKPEAMPSMTVR  144 (291)
Q Consensus       131 l~~~p~~RPs~~~v  144 (291)
                      +...|.+||++.++
T Consensus       496 ls~~p~~RP~~~~~  509 (516)
T KOG1033|consen  496 LSPSPEERPSAIEV  509 (516)
T ss_pred             cCCCcccCchHHHH
Confidence            99999999965443

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.33  E-value=5.4e-13  Score=121.21  Aligned_cols=125  Identities=22%  Similarity=0.172  Sum_probs=91.4

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCcccc---CCCCc
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWM---SFPVT   56 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~---~~~~~   56 (291)
                      +++...+||+|||+   .+-+|||||-.|||++..+.                        |+.|||||+..   .+.|.
T Consensus       117 vcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggyn  193 (829)
T KOG0576|consen  117 VCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYN  193 (829)
T ss_pred             HHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhccccc
Confidence            45788899999999   99999999999999986543                        99999999875   45799


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++|||+.|++..|+-.-++|.....+.        .+......    ...++..+ +....-...+-+++..|+-.+|+
T Consensus       194 qlcdiwa~gitAiel~eLqpplfdlhpm--------r~l~LmTk----S~~qpp~l-kDk~kws~~fh~fvK~altknpK  260 (829)
T KOG0576|consen  194 QLCDIWALGITAIELGELQPPLFDLHPM--------RALFLMTK----SGFQPPTL-KDKTKWSEFFHNFVKGALTKNPK  260 (829)
T ss_pred             ccccccccccchhhhhhcCCcccccchH--------HHHHHhhc----cCCCCCcc-cCCccchHHHHHHHHHHhcCCCc
Confidence            9999999999999998777775433321        11111111    11122111 22233456778899999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +||++..+
T Consensus       261 kRptaekl  268 (829)
T KOG0576|consen  261 KRPTAEKL  268 (829)
T ss_pred             cCCChhhh
Confidence            99998765

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.33  E-value=9.8e-13  Score=125.54  Aligned_cols=126  Identities=24%  Similarity=0.282  Sum_probs=88.7

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------------CCccccCccccC
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------------TPGYAAPETWMS   52 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------------t~~y~aPE~~~~   52 (291)
                      |+-|++.||.-+|.   .+|+|+|||.+|||++.=+.                               -..|.|||.+..
T Consensus       125 iaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~  201 (1431)
T KOG1240|consen  125 IAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVS  201 (1431)
T ss_pred             HHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhc
Confidence            67899999999999   99999999999999973211                               346999998764


Q ss_pred             C----------C-CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhc-CccchhhhhcccccchHHH
Q 022858           53 F----------P-VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEK-GEFQDLIIVCGMEKNNKEK  119 (291)
Q Consensus        53 ~----------~-~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  119 (291)
                      .          . .+++-||||.||++.||++ |+++|....           +...... ....+.+-.    ..   +
T Consensus       202 ~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ-----------L~aYr~~~~~~~e~~Le----~I---e  263 (1431)
T KOG1240|consen  202 ALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ-----------LLAYRSGNADDPEQLLE----KI---E  263 (1431)
T ss_pred             cccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH-----------HHhHhccCccCHHHHHH----hC---c
Confidence            1          2 6778999999999999996 577775322           1111111 011111111    00   1


Q ss_pred             HHHHHHHHHHccccCCCCCCCCCccchhhhhhc
Q 022858          120 AERMALVALWRVQYKPEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       120 ~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~  152 (291)
                      ...+.++++.+++.||++|-++.+.  ++.-.+
T Consensus       264 d~~~Rnlil~Mi~rdPs~RlSAedy--L~~yrG  294 (1431)
T KOG1240|consen  264 DVSLRNLILSMIQRDPSKRLSAEDY--LQKYRG  294 (1431)
T ss_pred             CccHHHHHHHHHccCchhccCHHHH--HHhhhc
Confidence            1367788999999999999999998  665433

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.27  E-value=9.9e-12  Score=107.25  Aligned_cols=123  Identities=20%  Similarity=0.242  Sum_probs=87.0

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------------CCccccCc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------------TPGYAAPE   48 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------------t~~y~aPE   48 (291)
                      -|+.|+++|+.|||.   ++|.|||+|++|||+.-+..                                  ...-||||
T Consensus       345 ~~laQlLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPE  421 (598)
T KOG4158|consen  345 VILAQLLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPE  421 (598)
T ss_pred             HHHHHHHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchh
Confidence            367899999999999   99999999999999852211                                  55679999


Q ss_pred             cccCCC-----C-ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHH
Q 022858           49 TWMSFP-----V-THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAER  122 (291)
Q Consensus        49 ~~~~~~-----~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (291)
                      +....+     . -.|+|.|+.|.+.||+++...||......    .+-.   ....+.+++         ..+..++.-
T Consensus       422 i~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem----~L~~---r~Yqe~qLP---------alp~~vpp~  485 (598)
T KOG4158|consen  422 IATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM----LLDT---RTYQESQLP---------ALPSRVPPV  485 (598)
T ss_pred             hhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh----eech---hhhhhhhCC---------CCcccCChH
Confidence            876421     1 25799999999999999999999763211    1100   012222222         223344566


Q ss_pred             HHHHHHHccccCCCCCCCCCcc
Q 022858          123 MALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       123 ~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +.+++...++.||++|++..-.
T Consensus       486 ~rqlV~~lL~r~pskRvsp~iA  507 (598)
T KOG4158|consen  486 ARQLVFDLLKRDPSKRVSPNIA  507 (598)
T ss_pred             HHHHHHHHhcCCccccCCccHH
Confidence            7788888999999999996533

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.15  E-value=2e-11  Score=116.46  Aligned_cols=115  Identities=20%  Similarity=0.219  Sum_probs=84.6

Q ss_pred             HHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------------------CCccccC
Q 022858            7 GTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------------------TPGYAAP   47 (291)
Q Consensus         7 ~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------------------t~~y~aP   47 (291)
                      +.+.+++|||+   .+|+|||+||.|.|++.=+.                                       |+.|.||
T Consensus       151 dmvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaP  227 (1205)
T KOG0606|consen  151 DMVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAP  227 (1205)
T ss_pred             hhhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccCh
Confidence            44789999999   99999999999999973211                                       9999999


Q ss_pred             ccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHH
Q 022858           48 ETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVA  127 (291)
Q Consensus        48 E~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  127 (291)
                      |++....|...+|-|++|+++||.+.|+.||.+..+.+    ++..+....  ..+.         +.+.....+..+++
T Consensus       228 eVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee----lfg~visd~--i~wp---------E~dea~p~Ea~dli  292 (1205)
T KOG0606|consen  228 EVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE----LFGQVISDD--IEWP---------EEDEALPPEAQDLI  292 (1205)
T ss_pred             hhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH----HHhhhhhhh--cccc---------ccCcCCCHHHHHHH
Confidence            99999999999999999999999999999998886541    111111000  0011         11222235566777


Q ss_pred             HHccccCCCCCC
Q 022858          128 LWRVQYKPEAMP  139 (291)
Q Consensus       128 ~~cl~~~p~~RP  139 (291)
                      .+.++.+|..|-
T Consensus       293 ~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  293 EQLLRQNPLCRL  304 (1205)
T ss_pred             HHHHHhChHhhc
Confidence            778888888884

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.14  E-value=9.5e-11  Score=101.30  Aligned_cols=135  Identities=26%  Similarity=0.247  Sum_probs=92.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-C------------------------------CCccccCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-W------------------------------TPGYAAPETW   50 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-~------------------------------t~~y~aPE~~   50 (291)
                      ..++.|++.++.|+|+   .+++|||+||+||+++... .                              +..|++||.+
T Consensus       104 ~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~  180 (384)
T COG0515         104 LFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVL  180 (384)
T ss_pred             HHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHh
Confidence            3578899999999999   8999999999999998654 1                              4679999999


Q ss_pred             cC---CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHH
Q 022858           51 MS---FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVA  127 (291)
Q Consensus        51 ~~---~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  127 (291)
                      .+   ..++...|+|++|++++++++|..|+......    .........+......... ..............+.++.
T Consensus       181 ~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  255 (384)
T COG0515         181 LGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS----SATSQTLKIILELPTPSLA-SPLSPSNPELISKAASDLL  255 (384)
T ss_pred             cCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc----ccHHHHHHHHHhcCCcccc-cccCccccchhhHHHHHHH
Confidence            87   57888999999999999999999996544321    0111122222111111000 0000000012235677888


Q ss_pred             HHccccCCCCCCCCCcc
Q 022858          128 LWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       128 ~~cl~~~p~~RPs~~~v  144 (291)
                      ..|+..+|..|.++.+.
T Consensus       256 ~~~~~~~~~~r~~~~~~  272 (384)
T COG0515         256 KKLLAKDPKNRLSSSSD  272 (384)
T ss_pred             HHHHhcCchhcCCHHHH
Confidence            99999999999998766

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.02  E-value=1.7e-10  Score=104.84  Aligned_cols=110  Identities=25%  Similarity=0.172  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------CCccccCccccCCCCccccceech
Q 022858            5 AIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------TPGYAAPETWMSFPVTHKCDVRSF   64 (291)
Q Consensus         5 ~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------t~~y~aPE~~~~~~~~~~~Dv~s~   64 (291)
                      ...+|.|++++|.   .+|+|||+|++||+++.++.                    |.-|||||.+.  .....+|-|||
T Consensus       103 ~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eymApEI~~--gh~~a~D~ws~  177 (612)
T KOG0603|consen  103 LAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYRAPEIIN--GHLSAADWWSF  177 (612)
T ss_pred             HHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhhhhHhhh--ccCCcccchhh
Confidence            4568899999999   99999999999999998873                    77899999988  45678999999


Q ss_pred             hHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCCC
Q 022858           65 GMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSM  141 (291)
Q Consensus        65 G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~  141 (291)
                      |++.+||+||..||....            ...+..          .....+.........+.......+|.+|--.
T Consensus       178 gvl~felltg~~pf~~~~------------~~~Il~----------~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  178 GVLAFELLTGTLPFGGDT------------MKRILK----------AELEMPRELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             hhhHHHHhhCCCCCchHH------------HHHHhh----------hccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence            999999999999987521            111111          0112233444455556666677778777654

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.00  E-value=3.9e-10  Score=98.99  Aligned_cols=136  Identities=21%  Similarity=0.171  Sum_probs=91.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC---------------------------------------CCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF---------------------------------------WTP   42 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~---------------------------------------~t~   42 (291)
                      ++|+.|++.+|++||+   .+++||||||.|+++....                                       +|.
T Consensus       125 l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~  201 (322)
T KOG1164|consen  125 LRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTL  201 (322)
T ss_pred             HHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCcc
Confidence            6799999999999999   9999999999999997432                                       045


Q ss_pred             ccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHH
Q 022858           43 GYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAER  122 (291)
Q Consensus        43 ~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (291)
                      .|+++..-.+...+.+.|+||++-++.|++.|..|.........    ...+.........         .......+..
T Consensus       202 ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~----~~~~~~~~~~~~~---------~~~~~~~~~~  268 (322)
T KOG1164|consen  202 RYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL----KSKFEKDPRKLLT---------DRFGDLKPEE  268 (322)
T ss_pred             ccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch----HHHHHHHhhhhcc---------ccccCCChHH
Confidence            66666666666778899999999999999999988755443211    1111111110000         0011112345


Q ss_pred             HHHHHHHccccCCCCCCCCCccchhhhhhcccc
Q 022858          123 MALVALWRVQYKPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       123 ~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      +..+...+-..+...+|....+  ...|.....
T Consensus       269 ~~~~~~~~~~~~~~~~Pdy~~~--~~~l~~~~~  299 (322)
T KOG1164|consen  269 FAKILEYIDSLDYEDKPDYEKL--AELLKDVFD  299 (322)
T ss_pred             HHHHHHHhhccCCcCCCCHHHH--HHHHHHHHH
Confidence            5555555666888899998877  666555443

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.92  E-value=1.2e-09  Score=92.52  Aligned_cols=121  Identities=21%  Similarity=0.269  Sum_probs=82.8

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccCCC
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~~~   54 (291)
                      +++.||..||.|||+ |.++|+|+++..+.|++..++-                            .++|.+||.-..-+
T Consensus       180 kw~tqIlsal~yLhs-~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn  258 (458)
T KOG1266|consen  180 KWCTQILSALSYLHS-CDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTN  258 (458)
T ss_pred             HHHHHHHhhhhhhhc-cCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccc
Confidence            688999999999997 6799999999999999885542                            56888998766667


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      .+..+|||+||+-.+||..+..-.......    ...        +..+...+..   ...     ..-..++..|++..
T Consensus       259 ~~~a~dIy~fgmcAlemailEiq~tnseS~----~~~--------ee~ia~~i~~---len-----~lqr~~i~kcl~~e  318 (458)
T KOG1266|consen  259 TTGASDIYKFGMCALEMAILEIQSTNSESK----VEV--------EENIANVIIG---LEN-----GLQRGSITKCLEGE  318 (458)
T ss_pred             cccchhhhhhhHHHHHHHHheeccCCCcce----eeh--------hhhhhhheee---ccC-----ccccCcCcccccCC
Confidence            788999999999999988765432111110    000        0011111100   000     11134566899999


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |..||+|+++
T Consensus       319 P~~rp~ar~l  328 (458)
T KOG1266|consen  319 PNGRPDARLL  328 (458)
T ss_pred             CCCCcchhhh
Confidence            9999999987

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.65  E-value=1.6e-08  Score=89.85  Aligned_cols=36  Identities=33%  Similarity=0.414  Sum_probs=33.5

Q ss_pred             CcccCHHHHHHHhhccc--cccccCCCceeEEEEeccc
Q 022858          230 PIRFTSQQLSIATDNFT--HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       230 ~~~fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l~~~  265 (291)
                      ...|+|+||.+||+||+  +.||+||||.||||.++.-
T Consensus        62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~   99 (361)
T KOG1187|consen   62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG   99 (361)
T ss_pred             cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC
Confidence            46799999999999999  8999999999999999774

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.65  E-value=2.6e-08  Score=80.87  Aligned_cols=77  Identities=14%  Similarity=0.109  Sum_probs=57.0

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecC-CCCcEEEccCCC-------------------------------------CCcc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNI-KPENILLDVKFW-------------------------------------TPGY   44 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dl-kp~NIll~~~~~-------------------------------------t~~y   44 (291)
                      .++.|++.+|+++|+   .+|+|||| ||+|||++.++.                                     ++.|
T Consensus        95 ~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~  171 (218)
T PRK12274         95 AYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAA  171 (218)
T ss_pred             HHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            467899999999999   99999999 799999986643                                     4455


Q ss_pred             ccCccccCC-CCc-cccceechhHHHHHHhhCCCcccccc
Q 022858           45 AAPETWMSF-PVT-HKCDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        45 ~aPE~~~~~-~~~-~~~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                      ++|+...-- ..+ ...+-++-|.-+|+++|+..+.....
T Consensus       172 l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        172 LTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             CCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence            555432211 222 34567788999999999988865443

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.61  E-value=5.2e-08  Score=86.27  Aligned_cols=34  Identities=24%  Similarity=0.310  Sum_probs=31.0

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecC-CCCcEEEccCC
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNI-KPENILLDVKF   39 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dl-kp~NIll~~~~   39 (291)
                      .++.++++||.|||+   .+|+|||| ||+|||++.++
T Consensus       115 ~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~  149 (365)
T PRK09188        115 AWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDG  149 (365)
T ss_pred             HHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCC
Confidence            578899999999999   99999999 99999997654

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.57  E-value=1.6e-08  Score=83.52  Aligned_cols=65  Identities=14%  Similarity=0.150  Sum_probs=47.2

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------CCccccCc-----cccCCCCccccceechhHHHHHH
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------TPGYAAPE-----TWMSFPVTHKCDVRSFGMLLFEI   71 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------t~~y~aPE-----~~~~~~~~~~~Dv~s~G~~l~el   71 (291)
                      ...+++.+|..+|.   .+++|||+||+||+++.++.      ......-+     .+....++.++|+||||+++.-.
T Consensus       140 ~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~~~gi~liDfg~~~~~~e~~a~d~~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        140 VKAKIKASIESLHQ---HGMVSGDPHKGNFIVSKNGLRIIDLSGKRCTAQRKAKDRIDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             HHHHHHHHHHHHHH---cCCccCCCChHHEEEeCCCEEEEECCCcccccchhhHHHHHHHhHhcccccccceeEeehHH
Confidence            45689999999999   99999999999999986542      11111111     12234567899999999987754

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.46  E-value=4.8e-08  Score=92.04  Aligned_cols=126  Identities=22%  Similarity=0.232  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHHHh-cCCCCCeEeecCCCCcEEEccCC-C----------------------------CCccccCccccCC
Q 022858            4 IAIGTAEGIVSLH-DGCQQQIIHYNIKPENILLDVKF-W----------------------------TPGYAAPETWMSF   53 (291)
Q Consensus         4 i~~~ia~gL~ylH-~~~~~~ivH~Dlkp~NIll~~~~-~----------------------------t~~y~aPE~~~~~   53 (291)
                      ++.|+..|+.|+| .   .++.|||+||+|.+++.++ .                            ++.|+|||...+.
T Consensus       128 ~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~  204 (601)
T KOG0590|consen  128 YLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGK  204 (601)
T ss_pred             hhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccch
Confidence            5678999999999 6   9999999999999999776 2                            6789999998885


Q ss_pred             C-CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           54 P-VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        54 ~-~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      . .....|+||.|+++.-+++|..|.+........  ...|.....   ..        ..............+..+++.
T Consensus       205 ~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~--~~~~~~~~~---~~--------~~~~~~~~~~~~~~~l~k~l~  271 (601)
T KOG0590|consen  205 AYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR--YSSWKSNKG---RF--------TQLPWNSISDQAHDLLHKILK  271 (601)
T ss_pred             hhcCCCcccccccccccccccCCCCcccccccccc--ceeeccccc---cc--------ccCccccCChhhhhccccccc
Confidence            4 456789999999999999999997665543211  111111110   00        001112223455666777888


Q ss_pred             cCCCCCCCCCccc
Q 022858          133 YKPEAMPSMTVRP  145 (291)
Q Consensus       133 ~~p~~RPs~~~v~  145 (291)
                      .+|..|.+..++.
T Consensus       272 ~~~~~r~s~~~~~  284 (601)
T KOG0590|consen  272 ENPSNRLSIEELK  284 (601)
T ss_pred             CCchhcccccccc
Confidence            9999999988883

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.45  E-value=1.8e-07  Score=79.51  Aligned_cols=80  Identities=23%  Similarity=0.270  Sum_probs=69.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------------------CCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------------------TPGYA   45 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------------------t~~y~   45 (291)
                      +.||+|+..-++|+|+   +.+|.|||||+|.||.....                                    |..||
T Consensus       127 ~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYM  203 (449)
T KOG1165|consen  127 AMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYM  203 (449)
T ss_pred             HHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeee
Confidence            4689999999999999   99999999999999974332                                    77888


Q ss_pred             cCccccCCCCccccceechhHHHHHHhhCCCcccccccc
Q 022858           46 APETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKAR   84 (291)
Q Consensus        46 aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~   84 (291)
                      +-..-.+..-+.+.|+=|+|-++...+-|..|+.+....
T Consensus       204 SINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~  242 (449)
T KOG1165|consen  204 SINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD  242 (449)
T ss_pred             EeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc
Confidence            887777777888999999999999999999999876644

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.38  E-value=2.8e-07  Score=89.61  Aligned_cols=73  Identities=25%  Similarity=0.243  Sum_probs=64.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------------CCccccCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------------TPGYAAPE   48 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------------t~~y~aPE   48 (291)
                      +.|+.|++.-++.||.   .+|||+||||+|.||.....                                 |-.+-++|
T Consensus       797 ~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~E  873 (974)
T KOG1166|consen  797 MFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIE  873 (974)
T ss_pred             hHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHH
Confidence            4578999999999999   99999999999999963321                                 66788999


Q ss_pred             cccCCCCccccceechhHHHHHHhhCCCc
Q 022858           49 TWMSFPVTHKCDVRSFGMLLFEILGRRRM   77 (291)
Q Consensus        49 ~~~~~~~~~~~Dv~s~G~~l~elltg~~p   77 (291)
                      +..+..++...|.|.++.+++-||.|+..
T Consensus       874 M~~grpWtYq~DyfGlAa~~h~mLFG~y~  902 (974)
T KOG1166|consen  874 MREGRPWTYQIDYFGLAATVHVMLFGKYM  902 (974)
T ss_pred             HhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999988654

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.34  E-value=1.1e-07  Score=87.90  Aligned_cols=123  Identities=20%  Similarity=0.245  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------------CCccccCccccC
Q 022858            6 IGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------------TPGYAAPETWMS   52 (291)
Q Consensus         6 ~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------------t~~y~aPE~~~~   52 (291)
                      .+++.||.|+|..  .++||++|.|++|.++.+..                                 ..-|.|||++..
T Consensus       106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~  183 (700)
T KOG2137|consen  106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG  183 (700)
T ss_pred             hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence            4567899999994  89999999999999997752                                 556999999998


Q ss_pred             CCCccccceechhHHHHHHh-hCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcc
Q 022858           53 FPVTHKCDVRSFGMLLFEIL-GRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRV  131 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  131 (291)
                      ...+.++|+||+|+.+|-+. +|+.-+........ ..+.      .   ...+.    .........+.++.+-+.+.+
T Consensus       184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~-~~~~------~---~~~~~----~~~~~s~~~p~el~~~l~k~l  249 (700)
T KOG2137|consen  184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS-YSFS------R---NLLNA----GAFGYSNNLPSELRESLKKLL  249 (700)
T ss_pred             ccccccccceeeeeEEEEEecCCcchhhccCCcch-hhhh------h---ccccc----ccccccccCcHHHHHHHHHHh
Confidence            88889999999999999888 55555544432211 1000      0   00000    001111233456666677788


Q ss_pred             ccCCCCCCCCCcc
Q 022858          132 QYKPEAMPSMTVR  144 (291)
Q Consensus       132 ~~~p~~RPs~~~v  144 (291)
                      ..++..||++.++
T Consensus       250 ~~~~~~rp~~~~l  262 (700)
T KOG2137|consen  250 NGDSAVRPTLDLL  262 (700)
T ss_pred             cCCcccCcchhhh
Confidence            9999999976655

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.33  E-value=1.5e-07  Score=76.66  Aligned_cols=80  Identities=24%  Similarity=0.285  Sum_probs=64.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------------CCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------------TPGYAAP   47 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------------t~~y~aP   47 (291)
                      |-.+-|++.-++|+|.   +++|||||||+|.|..-+-.                                  |..|.+-
T Consensus       114 LMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASi  190 (341)
T KOG1163|consen  114 LMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASI  190 (341)
T ss_pred             HHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhh
Confidence            4467899999999999   99999999999999863321                                  6667666


Q ss_pred             ccccCCCCccccceechhHHHHHHhhCCCcccccccc
Q 022858           48 ETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKAR   84 (291)
Q Consensus        48 E~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~   84 (291)
                      ....+..-+.+.|+=|+|-+|....-|..|+.+....
T Consensus       191 nAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~  227 (341)
T KOG1163|consen  191 NAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA  227 (341)
T ss_pred             hhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence            6555556677899999999998888999998766543

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.31  E-value=4e-07  Score=73.66  Aligned_cols=33  Identities=15%  Similarity=0.245  Sum_probs=30.0

Q ss_pred             hhHHHHHHHHHHHH-hcCCCCCeEeecCCCCcEEEcc
Q 022858            2 HIIAIGTAEGIVSL-HDGCQQQIIHYNIKPENILLDV   37 (291)
Q Consensus         2 l~i~~~ia~gL~yl-H~~~~~~ivH~Dlkp~NIll~~   37 (291)
                      ++++.|++.+|.|+ |+   .+|+||||||+|||++.
T Consensus       120 ~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIli~~  153 (190)
T cd05147         120 RELYLQVIQIMRILYQD---CRLVHADLSEYNLLYHD  153 (190)
T ss_pred             HHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEEC
Confidence            46789999999999 67   89999999999999984

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.13  E-value=1.1e-05  Score=79.19  Aligned_cols=77  Identities=13%  Similarity=0.030  Sum_probs=48.0

Q ss_pred             CCccccCccccCCCCcc--ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHH
Q 022858           41 TPGYAAPETWMSFPVTH--KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKE  118 (291)
Q Consensus        41 t~~y~aPE~~~~~~~~~--~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (291)
                      +..+.++|.......+.  ..|+|.+|..+..+..|..+-......                   ..+.+.        .
T Consensus       353 ~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~~-------------------~~~l~~--------~  405 (1351)
T KOG1035|consen  353 AEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAVP-------------------VSLLDV--------L  405 (1351)
T ss_pred             ccccccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccccch-------------------hhhhcc--------c
Confidence            44566666655544443  369999999999988776553222110                   011111        0


Q ss_pred             HHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          119 KAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       119 ~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ....+......|+..+++.|++..++
T Consensus       406 ~~~~~~d~~~~~~~~~~~~Rl~~~~l  431 (1351)
T KOG1035|consen  406 STSELLDALPKCLDEDSEERLSALEL  431 (1351)
T ss_pred             cchhhhhhhhhhcchhhhhccchhhh
Confidence            11145666778999999999999888

>PRK10345 hypothetical protein; Provisional

Probab=98.10  E-value=2.3e-06  Score=70.16  Aligned_cols=32  Identities=25%  Similarity=0.303  Sum_probs=28.4

Q ss_pred             HHHHHHHHH-HHHhcCCCCCeEeecCCCCcEEEccC
Q 022858            4 IAIGTAEGI-VSLHDGCQQQIIHYNIKPENILLDVK   38 (291)
Q Consensus         4 i~~~ia~gL-~ylH~~~~~~ivH~Dlkp~NIll~~~   38 (291)
                      ++.+++.++ +|||+   ++|+||||||+|||++.+
T Consensus       109 ~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~  141 (210)
T PRK10345        109 QLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRI  141 (210)
T ss_pred             HHHHHHHHHHHHHHH---CCEeecCCCHHHEEEecc
Confidence            467888888 99999   999999999999999864

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.08  E-value=2.7e-06  Score=68.83  Aligned_cols=33  Identities=18%  Similarity=0.207  Sum_probs=30.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD   36 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~   36 (291)
                      +.|+.|++.+|.++|+.  .+|+||||||+|||++
T Consensus       120 ~~i~~~l~~~l~~lH~~--~givHrDlkP~NIll~  152 (190)
T cd05145         120 EELYEQVVEQMRRLYQE--AGLVHGDLSEYNILYH  152 (190)
T ss_pred             HHHHHHHHHHHHHHHHh--CCEecCCCChhhEEEE
Confidence            46889999999999983  7999999999999998

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>smart00090 RIO RIO-like kinase

Probab=97.98  E-value=5.9e-06  Score=69.23  Aligned_cols=32  Identities=19%  Similarity=0.236  Sum_probs=30.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCC-eEeecCCCCcEEEc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQ-IIHYNIKPENILLD   36 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~-ivH~Dlkp~NIll~   36 (291)
                      ..++.|++.+|.|||.   .+ ++||||||+||+++
T Consensus       151 ~~i~~qi~~~l~~LH~---~g~iiH~Dikp~NIli~  183 (237)
T smart00090      151 FELYDDILEEMRKLYK---EGELVHGDLSEYNILVH  183 (237)
T ss_pred             HHHHHHHHHHHHHHHh---cCCEEeCCCChhhEEEE
Confidence            3688999999999999   88 99999999999998

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.91  E-value=8.1e-06  Score=68.51  Aligned_cols=33  Identities=27%  Similarity=0.329  Sum_probs=29.9

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF   39 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~   39 (291)
                      .+.+++.+|.+||+   .+|+||||||.|||++.+.
T Consensus       147 ~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~~  179 (239)
T PRK01723        147 QWQAIGQLIARFHD---AGVYHADLNAHNILLDPDG  179 (239)
T ss_pred             HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCCC
Confidence            46789999999999   9999999999999998753

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.89  E-value=5.5e-06  Score=75.61  Aligned_cols=122  Identities=19%  Similarity=0.229  Sum_probs=84.0

Q ss_pred             hhHHHHHHH----HHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------------CCccccC
Q 022858            2 HIIAIGTAE----GIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------------TPGYAAP   47 (291)
Q Consensus         2 l~i~~~ia~----gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------------t~~y~aP   47 (291)
                      .+++.+...    ||.++|+   .+++|-|+||.||+...+..                              ...|++|
T Consensus       221 ~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~k  297 (524)
T KOG0601|consen  221 WNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAK  297 (524)
T ss_pred             hhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeCh
Confidence            345666777    9999999   99999999999999987722                              5579999


Q ss_pred             ccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHH
Q 022858           48 ETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVA  127 (291)
Q Consensus        48 E~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  127 (291)
                      |...+ -++..+|+|++|.+..+..++..++......         .|...+.+.+..-...        .-..++....
T Consensus       298 e~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~---------~W~~~r~~~ip~e~~~--------~~s~~l~~~~  359 (524)
T KOG0601|consen  298 ELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNS---------SWSQLRQGYIPLEFCE--------GGSSSLRSVT  359 (524)
T ss_pred             hhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCC---------CccccccccCchhhhc--------CcchhhhhHH
Confidence            97654 6778899999999999999888766544322         1111211111111100        1112333467


Q ss_pred             HHccccCCCCCCCCCcc
Q 022858          128 LWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       128 ~~cl~~~p~~RPs~~~v  144 (291)
                      ..+++.+|..|++...+
T Consensus       360 ~~~~d~~~~~~~~~q~~  376 (524)
T KOG0601|consen  360 SQMLDEDPRLRLTAQIL  376 (524)
T ss_pred             HHhcCcchhhhhHHHHH
Confidence            78899999999987665

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.86  E-value=8.7e-06  Score=78.87  Aligned_cols=76  Identities=26%  Similarity=0.374  Sum_probs=66.6

Q ss_pred             HHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------------------------
Q 022858            6 IGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------------------------   40 (291)
Q Consensus         6 ~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------------------------   40 (291)
                      ..+..+++|||.   ..++|||++|.|+|...++.                                             
T Consensus       911 ~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~  987 (1205)
T KOG0606|consen  911 LERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSAD  987 (1205)
T ss_pred             HHHHhhhhcccc---chhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccc
Confidence            456789999999   77999999999999764432                                             


Q ss_pred             ----------CCccccCccccCCCCccccceechhHHHHHHhhCCCcccccccc
Q 022858           41 ----------TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKAR   84 (291)
Q Consensus        41 ----------t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~   84 (291)
                                |+.|.+||...+......+|.|+.|++++|.++|.+||....+.
T Consensus       988 ~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq 1041 (1205)
T KOG0606|consen  988 EARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQ 1041 (1205)
T ss_pred             hhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchh
Confidence                      88899999999988888999999999999999999999877764

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.81  E-value=1.2e-05  Score=73.53  Aligned_cols=120  Identities=15%  Similarity=0.191  Sum_probs=79.9

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccc--cCccccCCCCc
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYA--APETWMSFPVT   56 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~--aPE~~~~~~~~   56 (291)
                      ++++..|++.|+.++|+   +.++|+|+||+||++..++.                      .-.++  ++.......+.
T Consensus       368 ~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~  444 (524)
T KOG0601|consen  368 RLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHL  444 (524)
T ss_pred             hhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhccccccccccceecccccccccccccchhhccccccc
Confidence            36778899999999999   99999999999999988522                      22333  44444456788


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .+.|+++||..+.|.+++...-.....           +..+..+.....         +.. ...+..++...+..++.
T Consensus       445 ~~~~~~sl~~~~~e~~~~~~ls~~~~~-----------~~~i~~~~~p~~---------~~~-~~~~q~~~kv~~~~~~~  503 (524)
T KOG0601|consen  445 SKADIFSLGLSVDEAITGSPLSESGVQ-----------SLTIRSGDTPNL---------PGL-KLQLQVLLKVMINPDRK  503 (524)
T ss_pred             cccccccccccccccccCcccCccccc-----------ceeeecccccCC---------Cch-HHhhhhhhhhhcCCccc
Confidence            899999999999999988764322110           111112211111         111 13444555566788888


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      .||.+.+.
T Consensus       504 ~~~l~~~l  511 (524)
T KOG0601|consen  504 RRPSAVEL  511 (524)
T ss_pred             cchhhhhh
Confidence            88988776

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.79  E-value=4.4e-05  Score=67.54  Aligned_cols=80  Identities=18%  Similarity=0.206  Sum_probs=65.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCcccc-----CC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWM-----SF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~-----~~   53 (291)
                      ++.++.+|.+.+-||.   .+.+-+|++++|+|+..+..                       ...|.+||.-.     +.
T Consensus       120 lrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~  196 (637)
T COG4248         120 LRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGF  196 (637)
T ss_pred             HHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEEcccceeeccCCceEecccCccccCCHHHhcccccccc
Confidence            6788999999999999   99999999999999975532                       66799999655     23


Q ss_pred             CCccccceechhHHHHHHhhC-CCcccccccc
Q 022858           54 PVTHKCDVRSFGMLLFEILGR-RRMRTCQKAR   84 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg-~~p~~~~~~~   84 (291)
                      .-+...|-|.+|+++++++.| +.||.+-...
T Consensus       197 ~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~  228 (637)
T COG4248         197 ERTANHDNFGLAVLIFHLLFGGRHPYSGIPLI  228 (637)
T ss_pred             CCCccccchhHHHHHHHHHhcCCCCCCccccc
Confidence            456789999999999998865 8888765443

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.76  E-value=2.3e-05  Score=63.71  Aligned_cols=33  Identities=30%  Similarity=0.274  Sum_probs=30.7

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccC
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK   38 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~   38 (291)
                      .++.+++.++.++|.   .+++||||||+||+++.+
T Consensus       129 ~~~~~i~~~l~~lh~---~gi~H~Dl~p~Nill~~~  161 (198)
T cd05144         129 EVLDEILEEIVKAYK---HGIIHGDLSEFNILVDDD  161 (198)
T ss_pred             HHHHHHHHHHHHHHH---CCCCcCCCCcccEEEcCC
Confidence            578899999999999   999999999999999875

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK14879 serine/threonine protein kinase; Provisional

Probab=97.63  E-value=3.8e-05  Score=62.93  Aligned_cols=32  Identities=22%  Similarity=0.316  Sum_probs=30.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD   36 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~   36 (291)
                      ..++.+++.+|.++|+   .+++|+|++|.|||++
T Consensus        98 ~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~  129 (211)
T PRK14879         98 LELSREIGRLVGKLHS---AGIIHGDLTTSNMILS  129 (211)
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE
Confidence            4788999999999999   9999999999999998

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=97.61  E-value=5.4e-05  Score=61.44  Aligned_cols=31  Identities=19%  Similarity=0.296  Sum_probs=29.5

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD   36 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~   36 (291)
                      .++.+++.+|.+||+   .+++|+|++|.||+++
T Consensus        94 ~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~  124 (199)
T TIGR03724        94 ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR  124 (199)
T ss_pred             HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE
Confidence            578899999999999   9999999999999998

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=97.57  E-value=4.6e-05  Score=71.67  Aligned_cols=33  Identities=18%  Similarity=0.289  Sum_probs=30.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV   37 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~   37 (291)
                      ..++.+++.+|.|||+   .+++||||||+|||++.
T Consensus       431 ~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl~~  463 (535)
T PRK09605        431 PELVRKVGEIVAKLHK---AGIVHGDLTTSNFIVRD  463 (535)
T ss_pred             HHHHHHHHHHHHHHHh---CCCccCCCChHHEEEEC
Confidence            3578999999999999   99999999999999943

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.50  E-value=7.9e-05  Score=59.79  Aligned_cols=33  Identities=21%  Similarity=0.195  Sum_probs=30.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD   36 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~   36 (291)
                      ..++.+++.++.++|..  .+|+|+||||+||+++
T Consensus       117 ~~~~~~~~~~l~~lh~~--~~ivH~Dl~p~Nili~  149 (187)
T cd05119         117 EELYDQILELMRKLYRE--AGLVHGDLSEYNILVD  149 (187)
T ss_pred             HHHHHHHHHHHHHHhhc--cCcCcCCCChhhEEEE
Confidence            35788999999999983  7899999999999998

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.35  E-value=0.00023  Score=54.23  Aligned_cols=37  Identities=32%  Similarity=0.287  Sum_probs=31.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK   38 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~   38 (291)
                      ..++.+++.+|+++|.....+++|+|++|+||+++..
T Consensus        89 ~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~  125 (155)
T cd05120          89 EDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDG  125 (155)
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECC
Confidence            3577899999999999544579999999999999873

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=96.90  E-value=0.00077  Score=54.55  Aligned_cols=33  Identities=12%  Similarity=0.125  Sum_probs=28.8

Q ss_pred             hHHHHHHHHHHHH-hcCCCCCeEeecCCCCcEEEccC
Q 022858            3 IIAIGTAEGIVSL-HDGCQQQIIHYNIKPENILLDVK   38 (291)
Q Consensus         3 ~i~~~ia~gL~yl-H~~~~~~ivH~Dlkp~NIll~~~   38 (291)
                      ++..+++.+|..| |.   .++||+||++.|||++.+
T Consensus       128 ~i~~~i~~~l~~l~H~---~glVHGDLs~~NIL~~~~  161 (197)
T cd05146         128 NAYYQVLSMMKQLYKE---CNLVHADLSEYNMLWHDG  161 (197)
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEECC
Confidence            4567899999999 78   899999999999999743

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=96.89  E-value=0.0014  Score=61.27  Aligned_cols=67  Identities=15%  Similarity=0.189  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----CC--------------------ccccCccccCCCCcccc
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----TP--------------------GYAAPETWMSFPVTHKC   59 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----t~--------------------~y~aPE~~~~~~~~~~~   59 (291)
                      .+.||+.||.|||..  .+++|++|.-+.|+++..+.    ..                    .|..|+.+...  ....
T Consensus       109 Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s--~~s~  184 (690)
T KOG1243|consen  109 GLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPS--EWSI  184 (690)
T ss_pred             HHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCcc--ccch
Confidence            367999999999973  79999999999999998876    11                    12233221111  1235


Q ss_pred             ceechhHHHHHHhhC
Q 022858           60 DVRSFGMLLFEILGR   74 (291)
Q Consensus        60 Dv~s~G~~l~elltg   74 (291)
                      |.|.|||+++|++.|
T Consensus       185 D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  185 DSWGLGCLIEELFNG  199 (690)
T ss_pred             hhhhHHHHHHHHhCc
Confidence            999999999999988

>cd05151 ChoK Choline Kinase (ChoK)

Probab=96.84  E-value=0.0013  Score=51.71  Aligned_cols=35  Identities=26%  Similarity=0.193  Sum_probs=28.2

Q ss_pred             hHHHHHHHHHHHHhcCC--CCCeEeecCCCCcEEEcc
Q 022858            3 IIAIGTAEGIVSLHDGC--QQQIIHYNIKPENILLDV   37 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~--~~~ivH~Dlkp~NIll~~   37 (291)
                      .++.+++.+|+.||...  ...++|+|++|.||+++.
T Consensus        87 ~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~  123 (170)
T cd05151          87 ENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDD  123 (170)
T ss_pred             HHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEEC
Confidence            35678999999999932  122699999999999983

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=96.72  E-value=0.0014  Score=53.66  Aligned_cols=34  Identities=35%  Similarity=0.425  Sum_probs=31.7

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF   39 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~   39 (291)
                      .++.+++..+.-||.   .+|+|+|+++.|||++.+.
T Consensus       122 ~ll~~l~~~i~~lH~---~gi~H~Dl~~~NILv~~~~  155 (206)
T PF06293_consen  122 ELLRALARLIAKLHD---AGIYHGDLNPSNILVDPDD  155 (206)
T ss_pred             HHHHHHHHHHHHHHH---CcCCCCCCCcccEEEeCCC
Confidence            578899999999999   9999999999999999875

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=96.45  E-value=0.0022  Score=54.65  Aligned_cols=32  Identities=19%  Similarity=0.213  Sum_probs=29.9

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV   37 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~   37 (291)
                      .++.+++..+.-||.   .+|+|+|++++|||++.
T Consensus       142 ~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~  173 (268)
T PRK15123        142 MLIKRVATMVRDMHA---AGINHRDCYICHFLLHL  173 (268)
T ss_pred             HHHHHHHHHHHHHHH---CcCccCCCChhhEEEec
Confidence            577899999999999   99999999999999985

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=96.14  E-value=0.0097  Score=47.36  Aligned_cols=35  Identities=37%  Similarity=0.353  Sum_probs=31.3

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW   40 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~   40 (291)
                      ..+..|-+.+.-||.   ..|||+||..+||+|..++.
T Consensus       117 ~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~  151 (229)
T KOG3087|consen  117 ELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGN  151 (229)
T ss_pred             HHHHHHHHHHHHhhh---CCeecccccccceEEecCCC
Confidence            567888899999999   99999999999999987765

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=96.10  E-value=0.011  Score=53.08  Aligned_cols=20  Identities=30%  Similarity=0.406  Sum_probs=17.5

Q ss_pred             cccccccCCCceeEEEEecc
Q 022858          245 FTHLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       245 F~~~lG~GGfG~VYkG~l~~  264 (291)
                      +...+|+|+||.||||+|+.
T Consensus       214 l~eli~~Grfg~V~KaqL~~  233 (534)
T KOG3653|consen  214 LLELIGRGRFGCVWKAQLDN  233 (534)
T ss_pred             hHHHhhcCccceeehhhccC
Confidence            33689999999999999976

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=95.90  E-value=0.0036  Score=58.24  Aligned_cols=22  Identities=27%  Similarity=0.450  Sum_probs=19.4

Q ss_pred             Hhhccc--cccccCCCceeEEEEe
Q 022858          241 ATDNFT--HLLVSGGSGALYKLQR  262 (291)
Q Consensus       241 aT~nF~--~~lG~GGfG~VYkG~l  262 (291)
                      .+++|.  ++||+||||.||||.+
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~  166 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLR  166 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEe
Confidence            367888  8999999999999975

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=95.55  E-value=0.032  Score=56.49  Aligned_cols=34  Identities=18%  Similarity=0.116  Sum_probs=23.7

Q ss_pred             ccCHHHHHHHhhccccccccCCCceeEEEEecccc
Q 022858          232 RFTSQQLSIATDNFTHLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       232 ~fs~~el~~aT~nF~~~lG~GGfG~VYkG~l~~~~  266 (291)
                      .++++++..+.. ..+.||+|+||.||||+...-+
T Consensus       682 ~~~~~~~~~~~~-~~~~ig~G~~g~Vy~~~~~~~~  715 (968)
T PLN00113        682 SITINDILSSLK-EENVISRGKKGASYKGKSIKNG  715 (968)
T ss_pred             hhhHHHHHhhCC-cccEEccCCCeeEEEEEECCCC
Confidence            456666654322 2278999999999999875443

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.33  E-value=0.023  Score=45.29  Aligned_cols=34  Identities=21%  Similarity=0.220  Sum_probs=29.9

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF   39 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~   39 (291)
                      .++..+-.-+.-||.   .+|||+||.++||++....
T Consensus        96 ~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~  129 (204)
T COG3642          96 DLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR  129 (204)
T ss_pred             HHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc
Confidence            467777888899999   9999999999999998874

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=95.24  E-value=0.02  Score=52.55  Aligned_cols=34  Identities=18%  Similarity=0.179  Sum_probs=27.0

Q ss_pred             hHHHHHHH-HHHHHhcCCCCCeEeecCCCCcEEEccCC
Q 022858            3 IIAIGTAE-GIVSLHDGCQQQIIHYNIKPENILLDVKF   39 (291)
Q Consensus         3 ~i~~~ia~-gL~ylH~~~~~~ivH~Dlkp~NIll~~~~   39 (291)
                      +++..++. .+..+|.   .+++|+|+||.||+++.++
T Consensus       260 ~ia~~~~~~~l~ql~~---~g~~H~D~hPgNilv~~~g  294 (437)
T TIGR01982       260 ALAENLARSFLNQVLR---DGFFHADLHPGNIFVLKDG  294 (437)
T ss_pred             HHHHHHHHHHHHHHHh---CCceeCCCCcccEEECCCC
Confidence            35555555 4677888   9999999999999998764

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=94.64  E-value=0.055  Score=43.56  Aligned_cols=33  Identities=27%  Similarity=0.375  Sum_probs=26.0

Q ss_pred             hHHHHHHHHHHHH-hcCCCCCeEeecCCCCcEEEccC
Q 022858            3 IIAIGTAEGIVSL-HDGCQQQIIHYNIKPENILLDVK   38 (291)
Q Consensus         3 ~i~~~ia~gL~yl-H~~~~~~ivH~Dlkp~NIll~~~   38 (291)
                      .++.+++..+..+ |.   .+|||+||.+.|||++.+
T Consensus       110 ~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~  143 (188)
T PF01163_consen  110 ELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG  143 (188)
T ss_dssp             HHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT
T ss_pred             HHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc
Confidence            3566777766664 67   899999999999999987

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK09902 hypothetical protein; Provisional

Probab=94.45  E-value=0.035  Score=45.36  Aligned_cols=34  Identities=12%  Similarity=0.019  Sum_probs=31.2

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF   39 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~   39 (291)
                      .++.+|+..+.-||.   .++.|+|+-+.|||++.++
T Consensus       132 ~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g  165 (216)
T PRK09902        132 AMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEG  165 (216)
T ss_pred             HHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCC
Confidence            678899999999999   9999999999999998553

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=94.33  E-value=0.02  Score=54.36  Aligned_cols=24  Identities=29%  Similarity=0.385  Sum_probs=20.5

Q ss_pred             Hhhccc--cccccCCCceeEEEEecc
Q 022858          241 ATDNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       241 aT~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      .+++|.  ++||+||||.||+|.+..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~  155 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVN  155 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcC
Confidence            466788  899999999999998843

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=93.82  E-value=0.071  Score=43.88  Aligned_cols=33  Identities=27%  Similarity=0.325  Sum_probs=28.8

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF   39 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~   39 (291)
                      ++..+++++.-||.   .++.|+|..|+|++++.+.
T Consensus       140 ~~~ki~~~ikqlH~---~G~~HGD~hpgNFlv~~~~  172 (229)
T PF06176_consen  140 LAEKIVEAIKQLHK---HGFYHGDPHPGNFLVSNNG  172 (229)
T ss_pred             HHHHHHHHHHHHHH---cCCccCCCCcCcEEEECCc
Confidence            34568889999999   9999999999999999764

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PHA02882 putative serine/threonine kinase; Provisional

Probab=93.44  E-value=0.041  Score=47.39  Aligned_cols=19  Identities=32%  Similarity=0.412  Sum_probs=16.9

Q ss_pred             cccccCCCceeEEEEeccc
Q 022858          247 HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~  265 (291)
                      .+||+||||.||+|+....
T Consensus        18 ~~LG~G~fG~Vy~~~~~~~   36 (294)
T PHA02882         18 KLIGCGGFGCVYETQCASD   36 (294)
T ss_pred             eEEecCCCceEEEEEEcCC
Confidence            6899999999999997655

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=93.38  E-value=0.048  Score=52.66  Aligned_cols=22  Identities=32%  Similarity=0.219  Sum_probs=19.5

Q ss_pred             cccccCCCceeEEEEecccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQN  268 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~~  268 (291)
                      .+||+|.||.||||.+=|-+.|
T Consensus       702 kvLGsgAfGtV~kGiw~Pege~  723 (1177)
T KOG1025|consen  702 KVLGSGAFGTVYKGIWIPEGEN  723 (1177)
T ss_pred             ceeccccceeEEeeeEecCCce
Confidence            6899999999999999777665

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=93.26  E-value=0.1  Score=50.08  Aligned_cols=40  Identities=15%  Similarity=0.200  Sum_probs=31.6

Q ss_pred             cCHHHHHHHhhccc-----------cccccCCCceeEEEEecc-cccceeec
Q 022858          233 FTSQQLSIATDNFT-----------HLLVSGGSGALYKLQRDF-WQQNQCVS  272 (291)
Q Consensus       233 fs~~el~~aT~nF~-----------~~lG~GGfG~VYkG~l~~-~~~~~~~~  272 (291)
                      ++|++=-+|.+.|+           ..||.|.||.||+|.|+. =+.-.||.
T Consensus       610 ~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VA  661 (996)
T KOG0196|consen  610 HTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVA  661 (996)
T ss_pred             ccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEE
Confidence            68888888888887           479999999999999954 44556664

>PTZ00284 protein kinase; Provisional

Probab=92.17  E-value=0.057  Score=49.92  Aligned_cols=34  Identities=18%  Similarity=0.289  Sum_probs=26.0

Q ss_pred             CHHHHHHHhhccc--cccccCCCceeEEEEeccccc
Q 022858          234 TSQQLSIATDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       234 s~~el~~aT~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ..+++...+++|.  .+||+||||.||++.....++
T Consensus       120 ~~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~  155 (467)
T PTZ00284        120 LGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKE  155 (467)
T ss_pred             cCCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCe
Confidence            3445556678888  899999999999998765443

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=91.99  E-value=0.058  Score=46.18  Aligned_cols=36  Identities=19%  Similarity=0.228  Sum_probs=30.4

Q ss_pred             cCHHHHHHHhhccc--cccccCCCceeEEEEecccccc
Q 022858          233 FTSQQLSIATDNFT--HLLVSGGSGALYKLQRDFWQQN  268 (291)
Q Consensus       233 fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l~~~~~~  268 (291)
                      ++..++..++++|.  ..||+|+||.||++.....+..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~   49 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSL   49 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCE
Confidence            66678888999999  8999999999999988665543

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=91.93  E-value=0.068  Score=49.75  Aligned_cols=16  Identities=25%  Similarity=0.399  Sum_probs=14.9

Q ss_pred             cccccCCCceeEEEEe
Q 022858          247 HLLVSGGSGALYKLQR  262 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l  262 (291)
                      ..||+|.||+||||.+
T Consensus       398 ~rIGsGsFGtV~Rg~w  413 (678)
T KOG0193|consen  398 ERIGSGSFGTVYRGRW  413 (678)
T ss_pred             ceeccccccceeeccc
Confidence            7899999999999975

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=91.68  E-value=0.052  Score=46.26  Aligned_cols=35  Identities=11%  Similarity=0.190  Sum_probs=29.7

Q ss_pred             cCHHHHHHHhhccc--cccccCCCceeEEEEeccccc
Q 022858          233 FTSQQLSIATDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       233 fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      +.++.+..++++|.  ..||+|+||.||++.....+.
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~   44 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGS   44 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCc
Confidence            56678888899999  899999999999998866543

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=91.27  E-value=0.15  Score=45.01  Aligned_cols=37  Identities=8%  Similarity=0.002  Sum_probs=30.3

Q ss_pred             cccCHHHHHHHhhccc--cccccCCCceeEEEEeccccc
Q 022858          231 IRFTSQQLSIATDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       231 ~~fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ++....++..++++|.  ..||+|+||.||+|.....+.
T Consensus         5 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~   43 (345)
T cd07877           5 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGL   43 (345)
T ss_pred             hhhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCe
Confidence            3456678888999999  789999999999998765554

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=90.58  E-value=0.39  Score=40.80  Aligned_cols=34  Identities=21%  Similarity=0.086  Sum_probs=25.7

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW   40 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~   40 (291)
                      |+..|++-+.-+-.   .+|||+|+.+=||++++++.
T Consensus       207 il~~il~~~~~~~~---~GiVHGDlSefNIlV~~dg~  240 (304)
T COG0478         207 ILDKILEEVRKAYR---RGIVHGDLSEFNILVTEDGD  240 (304)
T ss_pred             HHHHHHHHHHHHHH---cCccccCCchheEEEecCCC
Confidence            34445555554445   89999999999999999865

>PRK09188 serine/threonine protein kinase; Provisional

Probab=90.54  E-value=0.13  Score=45.85  Aligned_cols=22  Identities=9%  Similarity=-0.117  Sum_probs=18.2

Q ss_pred             hccc--cccccCCCceeEEEEecc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      ++|.  ..||+||||.||+++.+.
T Consensus        18 ~~Y~~~~~IG~G~fg~Vy~a~~~~   41 (365)
T PRK09188         18 ARFVETAVLKRDVFSTVERGYFAG   41 (365)
T ss_pred             CCceEccEEeecCcEEEEEEEEcC
Confidence            4455  789999999999998754

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=90.16  E-value=0.18  Score=42.89  Aligned_cols=33  Identities=18%  Similarity=0.148  Sum_probs=26.5

Q ss_pred             CHHHHHHHhhccc--cccccCCCceeEEEEecccc
Q 022858          234 TSQQLSIATDNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       234 s~~el~~aT~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      +..++..+++.|.  ..||+||||.||+|+...-+
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~   41 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTG   41 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCC
Confidence            5666667777787  89999999999999976543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=90.15  E-value=0.16  Score=45.41  Aligned_cols=37  Identities=8%  Similarity=0.192  Sum_probs=29.5

Q ss_pred             ccCHHHHHHHhhccc--cccccCCCceeEEEEecccccc
Q 022858          232 RFTSQQLSIATDNFT--HLLVSGGSGALYKLQRDFWQQN  268 (291)
Q Consensus       232 ~fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l~~~~~~  268 (291)
                      .-+.+++....++|.  ..||+||||.||+++.+.-++.
T Consensus        32 ~~~~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~   70 (371)
T cd05622          32 INKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKV   70 (371)
T ss_pred             hhHHhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcE
Confidence            345666777778888  8999999999999988765544

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=90.08  E-value=0.12  Score=46.15  Aligned_cols=31  Identities=13%  Similarity=0.263  Sum_probs=24.4

Q ss_pred             HHhhccc--cccccCCCceeEEEEeccccccee
Q 022858          240 IATDNFT--HLLVSGGSGALYKLQRDFWQQNQC  270 (291)
Q Consensus       240 ~aT~nF~--~~lG~GGfG~VYkG~l~~~~~~~~  270 (291)
                      ..+++|.  .+||+|+||.||+++....+..-+
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a   72 (370)
T cd05596          40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYA   72 (370)
T ss_pred             CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEE
Confidence            3456677  889999999999999877665433

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=89.86  E-value=0.16  Score=46.60  Aligned_cols=21  Identities=19%  Similarity=0.243  Sum_probs=18.3

Q ss_pred             cccccccCCCceeEEEEeccc
Q 022858          245 FTHLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       245 F~~~lG~GGfG~VYkG~l~~~  265 (291)
                      +..+||+|-||.||+|.|..=
T Consensus       161 l~kkLGeGaFGeV~~G~l~~~  181 (474)
T KOG0194|consen  161 LGKKLGEGAFGEVFKGKLKLK  181 (474)
T ss_pred             ccceeecccccEEEEEEEEec
Confidence            447999999999999999764

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=89.80  E-value=0.16  Score=45.49  Aligned_cols=19  Identities=26%  Similarity=0.340  Sum_probs=15.9

Q ss_pred             cccccCCCceeEEEEeccc
Q 022858          247 HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~  265 (291)
                      ..||+|.||.||||.-..-
T Consensus        19 ~~IgrGsfG~Vyk~~d~~t   37 (467)
T KOG0201|consen   19 ELIGRGSFGEVYKAIDNKT   37 (467)
T ss_pred             hhccccccceeeeeeeccc
Confidence            5899999999999975443

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=89.27  E-value=0.22  Score=44.58  Aligned_cols=21  Identities=14%  Similarity=0.031  Sum_probs=17.8

Q ss_pred             cccccCCCceeEEEEeccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      +.||+||||.||+++...+++
T Consensus        44 ~~LG~G~fg~V~~~~~~~~~~   64 (374)
T cd05106          44 KTLGAGAFGKVVEATAFGLGK   64 (374)
T ss_pred             heecCCCcccEEEEEEecCCc
Confidence            899999999999998755554

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=89.24  E-value=0.21  Score=44.76  Aligned_cols=16  Identities=19%  Similarity=0.246  Sum_probs=14.8

Q ss_pred             cccccCCCceeEEEEe
Q 022858          247 HLLVSGGSGALYKLQR  262 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l  262 (291)
                      .+||+||||.||++..
T Consensus        41 ~~LG~G~fG~V~~~~~   56 (375)
T cd05104          41 KTLGAGAFGKVVEATA   56 (375)
T ss_pred             heecCCccceEEEEEE
Confidence            8999999999999975

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=89.11  E-value=0.21  Score=44.33  Aligned_cols=18  Identities=22%  Similarity=0.224  Sum_probs=15.6

Q ss_pred             cccccCCCceeEEEEecc
Q 022858          247 HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~  264 (291)
                      .+||+|.||+||||+...
T Consensus        16 ~~iG~GsfavVykg~h~~   33 (429)
T KOG0595|consen   16 REIGSGSFAVVYKGRHKK   33 (429)
T ss_pred             hhccCcceEEEEEeEecc
Confidence            369999999999999843

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=89.00  E-value=0.2  Score=43.77  Aligned_cols=18  Identities=28%  Similarity=0.412  Sum_probs=16.1

Q ss_pred             cccccCCCceeEEEEecc
Q 022858          247 HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~  264 (291)
                      +.+|.|.||.||+|++..
T Consensus        30 ~liG~GsFg~Vyq~~~~e   47 (364)
T KOG0658|consen   30 RLIGSGSFGVVYQAKLRE   47 (364)
T ss_pred             EEEeecccceEEEEEEcC
Confidence            689999999999999843

>PTZ00036 glycogen synthase kinase; Provisional

Probab=88.98  E-value=0.25  Score=45.33  Aligned_cols=25  Identities=12%  Similarity=0.219  Sum_probs=19.7

Q ss_pred             hhccc--cccccCCCceeEEEEecccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      +++|.  .+||+||||.||+|+...-+
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~   91 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTS   91 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCC
Confidence            44566  78999999999999875433

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=88.23  E-value=0.21  Score=46.73  Aligned_cols=32  Identities=16%  Similarity=0.150  Sum_probs=22.7

Q ss_pred             HHHHHHhhccc--cccccCCCceeEEEEeccccc
Q 022858          236 QQLSIATDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       236 ~el~~aT~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .+.....++|.  +.||+||||.||+++...-+.
T Consensus        25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~   58 (496)
T PTZ00283         25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGE   58 (496)
T ss_pred             ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCC
Confidence            33344455666  899999999999998654433

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=88.23  E-value=0.22  Score=43.29  Aligned_cols=18  Identities=17%  Similarity=0.370  Sum_probs=15.9

Q ss_pred             cccccCCCceeEEEEecc
Q 022858          247 HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~  264 (291)
                      |+|++|.||.||||+-+.
T Consensus        82 nrI~EGtyGiVYRakdk~   99 (419)
T KOG0663|consen   82 NRIEEGTYGVVYRAKDKK   99 (419)
T ss_pred             hhcccCcceeEEEeccCC
Confidence            899999999999997543

>PHA03210 serine/threonine kinase US3; Provisional

Probab=88.01  E-value=0.3  Score=45.70  Aligned_cols=23  Identities=17%  Similarity=0.232  Sum_probs=18.8

Q ss_pred             hhccc--cccccCCCceeEEEEecc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      .++|.  .+||+||||.||++.+..
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~  171 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRA  171 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEec
Confidence            45677  899999999999987643

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=87.85  E-value=0.24  Score=47.02  Aligned_cols=16  Identities=25%  Similarity=0.403  Sum_probs=14.6

Q ss_pred             cccccCCCceeEEEEe
Q 022858          247 HLLVSGGSGALYKLQR  262 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l  262 (291)
                      +.||+||||.||+|+=
T Consensus        19 e~LG~Ga~g~V~rgrn   34 (732)
T KOG4250|consen   19 ERLGKGAFGNVYRGRN   34 (732)
T ss_pred             hhhcCCccceeeeecc
Confidence            6899999999999983

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=87.72  E-value=0.58  Score=43.27  Aligned_cols=72  Identities=17%  Similarity=0.246  Sum_probs=52.6

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----CCccccCccccCC---C--CccccceechhHHHHHH
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----TPGYAAPETWMSF---P--VTHKCDVRSFGMLLFEI   71 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----t~~y~aPE~~~~~---~--~~~~~Dv~s~G~~l~el   71 (291)
                      ++.++.|++.||.++|+   -|..-+-|.+++||++.+..    ..+.|.  ++...   .  --.+-|.-.||.+++-|
T Consensus       395 lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~D--vl~~d~~~~le~~Qq~D~~~lG~ll~aL  469 (655)
T KOG3741|consen  395 LWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMD--VLQEDPTEPLESQQQNDLRDLGLLLLAL  469 (655)
T ss_pred             HHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEeccccee--eecCCCCcchhHHhhhhHHHHHHHHHHH
Confidence            36789999999999999   89888999999999998843    122221  11111   1  12457888999999999


Q ss_pred             hhCCCc
Q 022858           72 LGRRRM   77 (291)
Q Consensus        72 ltg~~p   77 (291)
                      .||..-
T Consensus       470 At~~~n  475 (655)
T KOG3741|consen  470 ATGTEN  475 (655)
T ss_pred             hhcccc
Confidence            999543

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=87.63  E-value=0.79  Score=36.85  Aligned_cols=40  Identities=18%  Similarity=0.113  Sum_probs=34.5

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW   40 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~   40 (291)
                      |.+|+.++++.+++++......+.-.|++++|+-++.++.
T Consensus        61 R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~  100 (188)
T PF12260_consen   61 RAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGR  100 (188)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCc
Confidence            5789999999999999866556888899999999997754

Proteins in this uncharacterised family are described as transmembrane proteins.

>PHA03211 serine/threonine kinase US3; Provisional

Probab=87.37  E-value=0.59  Score=43.27  Aligned_cols=26  Identities=19%  Similarity=0.425  Sum_probs=20.7

Q ss_pred             ccc--cccccCCCceeEEEEecccccce
Q 022858          244 NFT--HLLVSGGSGALYKLQRDFWQQNQ  269 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~~~~~~  269 (291)
                      +|.  .+||+|+||.||+++....++.-
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~v  197 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHPDYPQRV  197 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEECCCCCEE
Confidence            466  78999999999999987655433

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=87.22  E-value=0.34  Score=42.50  Aligned_cols=21  Identities=24%  Similarity=0.477  Sum_probs=17.7

Q ss_pred             ccc--cccccCCCceeEEEEecc
Q 022858          244 NFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      .|.  .+||+||||.||++.-..
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~   41 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKS   41 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecC
Confidence            566  799999999999998644

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=86.93  E-value=0.61  Score=43.90  Aligned_cols=19  Identities=21%  Similarity=0.448  Sum_probs=17.8

Q ss_pred             CCeEeecCCCCcEEEccCC
Q 022858           21 QQIIHYNIKPENILLDVKF   39 (291)
Q Consensus        21 ~~ivH~Dlkp~NIll~~~~   39 (291)
                      .+++|+|+||.||+++.++
T Consensus       279 ~GffHaDpHPGNIlv~~~g  297 (537)
T PRK04750        279 DGFFHADMHPGNIFVSYDP  297 (537)
T ss_pred             CCeeeCCCChHHeEEecCC
Confidence            8999999999999999875

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=86.93  E-value=0.35  Score=43.88  Aligned_cols=17  Identities=24%  Similarity=0.216  Sum_probs=15.3

Q ss_pred             cccccCCCceeEEEEec
Q 022858          247 HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~  263 (291)
                      .+||+||||.||+|..-
T Consensus        43 ~~LG~G~fG~Vy~~~~~   59 (400)
T cd05105          43 RILGSGAFGKVVEGTAY   59 (400)
T ss_pred             heecCCCCceEEEEEEc
Confidence            78999999999999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=86.62  E-value=0.44  Score=43.23  Aligned_cols=19  Identities=21%  Similarity=0.127  Sum_probs=16.7

Q ss_pred             cccccCCCceeEEEEeccc
Q 022858          247 HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~  265 (291)
                      .+||+|+||.||+|....+
T Consensus        43 ~~lG~G~fG~Vy~~~~~~~   61 (401)
T cd05107          43 RTLGSGAFGRVVEATAHGL   61 (401)
T ss_pred             hhccCCCceeEEEEEEcCC
Confidence            7999999999999987544

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=86.60  E-value=0.3  Score=43.71  Aligned_cols=30  Identities=10%  Similarity=0.321  Sum_probs=23.0

Q ss_pred             HHHHHHhhccc--cccccCCCceeEEEEeccc
Q 022858          236 QQLSIATDNFT--HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       236 ~el~~aT~nF~--~~lG~GGfG~VYkG~l~~~  265 (291)
                      .++...+++|.  .+||+||||.||+++...-
T Consensus        36 ~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~   67 (370)
T cd05621          36 RKLQMKAEDYDVVKVIGRGAFGEVQLVRHKSS   67 (370)
T ss_pred             HhcCCCHHHCeEEEEEEecCCeEEEEEEECCC
Confidence            34444566777  8899999999999987653

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=86.30  E-value=0.57  Score=41.41  Aligned_cols=30  Identities=13%  Similarity=0.222  Sum_probs=22.5

Q ss_pred             Hhhccc--cccccCCCceeEEEEeccccccee
Q 022858          241 ATDNFT--HLLVSGGSGALYKLQRDFWQQNQC  270 (291)
Q Consensus       241 aT~nF~--~~lG~GGfG~VYkG~l~~~~~~~~  270 (291)
                      ..+.|.  ..||+||||.||++.-...+..-.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va   46 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVA   46 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEE
Confidence            345676  789999999999998665555433

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=86.28  E-value=0.56  Score=41.50  Aligned_cols=21  Identities=24%  Similarity=0.344  Sum_probs=17.6

Q ss_pred             cccccCCCceeEEEEeccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ++||+|+||.||+|.....++
T Consensus        80 ~~lg~G~~g~V~~~~~~~~~~  100 (353)
T PLN00034         80 NRIGSGAGGTVYKVIHRPTGR  100 (353)
T ss_pred             hhccCCCCeEEEEEEECCCCC
Confidence            689999999999998765443

>PHA03209 serine/threonine kinase US3; Provisional

Probab=86.17  E-value=0.63  Score=41.34  Aligned_cols=24  Identities=17%  Similarity=0.286  Sum_probs=19.6

Q ss_pred             hhccc--cccccCCCceeEEEEeccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~  265 (291)
                      +.+|.  ..||+|+||.||+|..+.-
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~   90 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQ   90 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCC
Confidence            44566  8999999999999987544

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=86.10  E-value=0.41  Score=44.03  Aligned_cols=25  Identities=16%  Similarity=0.408  Sum_probs=20.3

Q ss_pred             HHHhhccc--cccccCCCceeEEEEec
Q 022858          239 SIATDNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       239 ~~aT~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      +-..++|.  ..||+|+||.||-.+-.
T Consensus       137 r~~~~DFe~Lk~IgkGAfGeVrLarKk  163 (550)
T KOG0605|consen  137 RLSLDDFELLKVIGKGAFGEVRLARKK  163 (550)
T ss_pred             cCCcccchhheeeccccceeEEEEEEc
Confidence            34677888  89999999999987643

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=86.07  E-value=0.75  Score=40.40  Aligned_cols=27  Identities=15%  Similarity=0.210  Sum_probs=20.3

Q ss_pred             hccc--cccccCCCceeEEEEecccccce
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQNQ  269 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~~~  269 (291)
                      +.|.  ..||+|+||.||++....-+..-
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~v   43 (343)
T cd07878          15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKV   43 (343)
T ss_pred             hhhhhheecccCCCeEEEEEEECCCCCEE
Confidence            4455  68999999999999876555433

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=86.06  E-value=0.87  Score=37.69  Aligned_cols=47  Identities=11%  Similarity=-0.089  Sum_probs=32.7

Q ss_pred             CCeEeecCCCCcEEEccCCCCCccccCccccCCCCccccceechhHHHHHHh
Q 022858           21 QQIIHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL   72 (291)
Q Consensus        21 ~~ivH~Dlkp~NIll~~~~~t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ell   72 (291)
                      ..++|+|+.+.|||++.+.........|+...+..     .|.+|+++.|..
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~-----~~Dla~~~~e~~  216 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYR-----AFDIANHFNEWA  216 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCch-----heeHHHHHHHHc
Confidence            46999999999999997333445555664433222     577888888865

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PHA03111 Ser/Thr kinase; Provisional

Probab=85.85  E-value=1  Score=39.50  Aligned_cols=36  Identities=25%  Similarity=0.399  Sum_probs=22.5

Q ss_pred             HHHHHHHHHHHHhc-CCCCCeEeecCCCCcEEEccCC
Q 022858            4 IAIGTAEGIVSLHD-GCQQQIIHYNIKPENILLDVKF   39 (291)
Q Consensus         4 i~~~ia~gL~ylH~-~~~~~ivH~Dlkp~NIll~~~~   39 (291)
                      |..|||.=.-.+.+ -|-...+|-||||.|||+-.+.
T Consensus       284 ifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~  320 (444)
T PHA03111        284 IFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSD  320 (444)
T ss_pred             HHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCC
Confidence            34555433222322 2236799999999999986553

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=85.62  E-value=0.57  Score=41.04  Aligned_cols=21  Identities=14%  Similarity=0.047  Sum_probs=17.8

Q ss_pred             cccccCCCceeEEEEeccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      +.||+|+||.||+++...-++
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~   44 (329)
T PTZ00263         24 ETLGTGSFGRVRIAKHKGTGE   44 (329)
T ss_pred             EEEEecCCeEEEEEEECCCCC
Confidence            789999999999999765443

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=85.53  E-value=0.47  Score=42.36  Aligned_cols=20  Identities=30%  Similarity=0.280  Sum_probs=17.1

Q ss_pred             cccccCCCceeEEEEecccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ..||+|+||.||||.+.-..
T Consensus        47 ~~iG~G~~g~V~~~~~~g~~   66 (362)
T KOG0192|consen   47 EVLGSGSFGTVYKGKWRGTD   66 (362)
T ss_pred             hhcccCCceeEEEEEeCCce
Confidence            56999999999999986654

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=85.36  E-value=0.34  Score=41.27  Aligned_cols=15  Identities=33%  Similarity=0.576  Sum_probs=13.6

Q ss_pred             cccccCCCceeEEEE
Q 022858          247 HLLVSGGSGALYKLQ  261 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~  261 (291)
                      .+||+|.||.|||.+
T Consensus        25 ~~IG~GsFg~vykv~   39 (375)
T KOG0591|consen   25 KKIGRGSFGEVYKVQ   39 (375)
T ss_pred             HHHcCCcchheEEee
Confidence            589999999999964

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=85.33  E-value=0.4  Score=45.44  Aligned_cols=70  Identities=20%  Similarity=0.140  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCccccce
Q 022858            4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHKCDV   61 (291)
Q Consensus         4 i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~~Dv   61 (291)
                      +++.-+++|+|+|+   -.=+|+|    ||+..++..                      ++.++|||+...+.+..+.|+
T Consensus       341 ~~r~et~~l~~l~~---~~~~~~d----~~l~s~~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~  413 (829)
T KOG0576|consen  341 PLRKETRPLAELHS---SYKVHRD----NILGSEEEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDS  413 (829)
T ss_pred             hhhhhccccccccc---ccccCcc----cccccccccccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCc
Confidence            44556678999998   5568888    777654322                      778999999999999999999


Q ss_pred             echhHHHHHHhhCCCcccc
Q 022858           62 RSFGMLLFEILGRRRMRTC   80 (291)
Q Consensus        62 ~s~G~~l~elltg~~p~~~   80 (291)
                      |+.|.-..++.-|.+|...
T Consensus       414 ~~~~~~~~~~ap~~pPr~~  432 (829)
T KOG0576|consen  414 GSLAVSAIQMAPGLPPRSS  432 (829)
T ss_pred             cCCCcchhhcCCCCCCCCC
Confidence            9999877777777766543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	291
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		3e-11
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		9e-11
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-06
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		2e-06

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 26/165 (15%)
Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
           IA+G+A G+  LHD C  +IIH ++K  NILLD +F                        
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 40  -WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-GRRRMRTCQKARSGFPSGFKWVWKK 97
             T G+ APE   +   + K DV  +G++L E++ G+R     + A         WV   
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 98  LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
           L++ + + L+ V        E+ E++  VAL   Q  P   P M+
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 308

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFWTP--------------------- 42
           IA+G+A G+  LHD C  +IIH ++K  NILLD +F                        
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 195
Query: 43  ----GYAAPETWMSFPVTHKCDVRSFGMLLFEIL-GRRRMRTCQKARSGFPSGFKWVWKK 97
               G+ APE   +   + K DV  +G++L E++ G+R     + A         WV   
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 98  LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
           L++ + + L+ V        E+ E++  VAL   Q  P   P M+
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
           I IG A G+  LH    + IIH ++K  NILLD  F                        
Sbjct: 144 ICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 40  --WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKK 97
              T GY  PE ++   +T K DV SFG++LFE+L  R     Q       +  +W  + 
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA-IVQSLPREMVNLAEWAVES 259
Query: 98  LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSM 141
              G+ + ++     +K   E   +    A+  +    E  PSM
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
           I IG A G+  LH    + IIH ++K  NILLD  F                        
Sbjct: 144 ICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 40  --WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKK 97
              T GY  PE ++   +T K DV SFG++LFE+L  R     Q       +  +W  + 
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA-IVQSLPREMVNLAEWAVES 259
Query: 98  LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSM 141
              G+ + ++     +K   E   +    A+  +    E  PSM
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	291
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-29
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	6e-21
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	6e-20
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-13
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-11
3soc_A	322	Activin receptor type-2A; structural genomics cons	7e-11
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-10
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-10
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-10
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	5e-09
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-08
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	5e-08
2a19_B	284	Interferon-induced, double-stranded RNA-activated	9e-08
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-07
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-07
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-07
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-07
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-07
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-07
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-07
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-07
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-07
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	6e-07
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	6e-07
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	9e-07
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	9e-07
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-06
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-06
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-06
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-06
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-06
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-06
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-06
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-06
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-06
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-06
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-06
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	5e-06
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-06
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	6e-06
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	9e-06
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	9e-06
3ork_A	311	Serine/threonine protein kinase; structural genomi	1e-05
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-05
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-05
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-05
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-05
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	3e-05
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-05
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	4e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-05
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	4e-05
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-05
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-05
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-05
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	5e-05
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	6e-05
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	6e-05
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	6e-05
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	8e-05
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-04
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-04
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-04
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-04
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-04
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-04
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-04
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-04
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-04
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-04
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-04
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-04
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-04
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	2e-04
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-04
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-04
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-04
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-04
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	4e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	5e-04
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-04
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	5e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	6e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	7e-04
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  113 bits (284), Expect = 1e-29
 Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 32/177 (18%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
           IA+G+A G+  LHD C  +IIH ++K  NILLD +F                        
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV 195

Query: 41  --TPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-GRRRMRTCQKARSGFPSGFKWVWKK 97
             T G+ APE   +   + K DV  +G++L E++ G+R     + A         WV   
Sbjct: 196 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255

Query: 98  LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT--VRPAKFMLHG 152
           L++ + + L+ V        E+ E++  VAL   Q  P   P M+  VR    ML G
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR----MLEG 308

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 90.0 bits (224), Expect = 6e-21
 Identities = 43/165 (26%), Positives = 64/165 (38%), Gaps = 32/165 (19%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
           I IG A G+  LH      IIH ++K  NILLD  F                        
Sbjct: 144 ICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTV 200

Query: 41  ---TPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-GRRRMRTCQKARSGFPSGFKWVWK 96
              T GY  PE ++   +T K DV SFG++LFE+L  R  +           +  +W  +
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP--REMVNLAEWAVE 258

Query: 97  KLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSM 141
               G+ + ++     +K   E   +    A+  +    E  PSM
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 86.8 bits (216), Expect = 6e-20
 Identities = 43/167 (25%), Positives = 61/167 (36%), Gaps = 37/167 (22%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
           IA G A GI  LH+      IH +IK  NILLD  F                        
Sbjct: 138 IAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSR 194

Query: 41  ---TPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-GRRRMRTCQKARSGFPSGFKWVWK 96
              T  Y APE  +   +T K D+ SFG++L EI+ G   +   ++ +           +
Sbjct: 195 IVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ----LLLDIKEE 249

Query: 97  KL-EKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
              E+   +D I    M   +    E M  VA   +  K    P + 
Sbjct: 250 IEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIK 295

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 67.7 bits (166), Expect = 3e-13
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 22/95 (23%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF----------------------WT 41
             +  ++G+  LH    + +IH ++KP N+LL                           +
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGS 166

Query: 42  PGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRR 76
             + APE +     + KCDV S+G++L+E++ RR+
Sbjct: 167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 201

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 25/96 (26%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK---F----------------- 39
           +A   A+G+  LH      I+H N+K  N+L+D    VK   F                 
Sbjct: 142 MAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA 200

Query: 40  WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRR 75
            TP + APE     P   K DV SFG++L+E+   +
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ 236

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 60.9 bits (148), Expect = 7e-11
 Identities = 31/182 (17%), Positives = 54/182 (29%), Gaps = 45/182 (24%)

Query: 4   IAIGTAEGIVSLH-------DGCQQQIIHYNIKPENILLDVKF----------------- 39
           IA   A G+  LH       DG +  I H +IK +N+LL                     
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK 185

Query: 40  ---------WTPGYAAPE-----TWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARS 85
                     T  Y APE              + D+ + G++L+E+   R          
Sbjct: 186 SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELA-SRCTAADGPVDE 244

Query: 86  GFPSGFKWVWKKLEKGEFQDLIIVCGM----EKNNKEKAERMALVALWR--VQYKPEAMP 139
                 + + +     + Q++++            ++ A    L         +  EA  
Sbjct: 245 YMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARL 304

Query: 140 SM 141
           S 
Sbjct: 305 SA 306

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 60.0 bits (146), Expect = 1e-10
 Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 30/102 (29%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
            A+  A G+  LHD     IIH ++K  NIL+  K                         
Sbjct: 110 WAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT 169

Query: 41  -------TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRR 75
                     + APE   +   +   DV S+G+LL+E+L   
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 59.9 bits (146), Expect = 1e-10
 Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 23/94 (24%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK---F------------WTPGY 44
            A+  A G+  LH   +  I  + +   ++++D     +                + P +
Sbjct: 116 FALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAW 174

Query: 45  AAPETWMSFP---VTHKCDVRSFGMLLFEILGRR 75
            APE     P        D+ SF +LL+E++ R 
Sbjct: 175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTRE 208

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 59.3 bits (144), Expect = 2e-10
 Identities = 28/148 (18%), Positives = 47/148 (31%), Gaps = 47/148 (31%)

Query: 3   IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD---------VK---F----------- 39
            + +  A GI  +       I+H +++  NI L           K   F           
Sbjct: 126 RLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVS 184

Query: 40  ---WTPGYAAPE--TWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGF-PSGFKW 93
                  + APE         T K D  SF M+L+ IL      T +     +     K+
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL------TGEGPFDEYSYGKIKF 238

Query: 94  VWKKLEKG-----------EFQDLIIVC 110
           +    E+G             +++I +C
Sbjct: 239 INMIREEGLRPTIPEDCPPRLRNVIELC 266

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 55.0 bits (133), Expect = 5e-09
 Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 32/98 (32%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK---FW---------------- 40
           IA  TA G+  LH    + IIH ++K  NI L     VK   F                 
Sbjct: 125 IARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ 181

Query: 41  ---TPGYAAPE---TWMSFPVTHKCDVRSFGMLLFEIL 72
              +  + APE      S P + + DV +FG++L+E++
Sbjct: 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 219

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 21/109 (19%), Positives = 35/109 (32%), Gaps = 40/109 (36%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD---VK---FW----------------- 40
           IA    +G+  LH    + I+H ++K +N+  D   V    F                  
Sbjct: 135 IAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKL 191

Query: 41  -----TPGYAAPE---------TWMSFPVTHKCDVRSFGMLLFEILGRR 75
                   + APE              P +   DV + G + +E+  R 
Sbjct: 192 RIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHARE 240

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 52.6 bits (126), Expect = 5e-08
 Identities = 31/134 (23%), Positives = 47/134 (35%), Gaps = 45/134 (33%)

Query: 9   AEGIVSLHDGCQQQIIHYNIKPENILLD----VK---FW--------------------- 40
           AE +  LH    + ++H ++KP NI       VK   F                      
Sbjct: 174 AEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 230

Query: 41  --------TPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-----GRRRMRTCQKARSG- 86
                   T  Y +PE       +HK D+ S G++LFE+L        R+R     R+  
Sbjct: 231 ATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLK 290

Query: 87  FPSGFKWVWKKLEK 100
           FP  F   + +   
Sbjct: 291 FPLLFTQKYPQEHM 304

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 51.1 bits (123), Expect = 9e-08
 Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 44/131 (33%)

Query: 8   TAEGIVSLHDGCQQQIIHYNIKPENILLD----VK---F-W---------------TPGY 44
             +G+  +H    +++I+ ++KP NI L     VK   F                 T  Y
Sbjct: 131 ITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRY 187

Query: 45  AAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG--- 101
            +PE   S     + D+ + G++L E+             + F +     +  L  G   
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAEL--------LHVCDTAFETSK--FFTDLRDGIIS 237

Query: 102 -----EFQDLI 107
                + + L+
Sbjct: 238 DIFDKKEKTLL 248

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 21/88 (23%), Positives = 30/88 (34%), Gaps = 26/88 (29%)

Query: 15  LHD--GCQQQIIHYNIKPENILLD----VKFW--------------------TPGYAAPE 48
            H        ++H ++KP N+ LD    VK                      TP Y +PE
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPE 186

Query: 49  TWMSFPVTHKCDVRSFGMLLFEILGRRR 76
                    K D+ S G LL+E+     
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYELCALMP 214

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 12/77 (15%), Positives = 21/77 (27%), Gaps = 15/77 (19%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILL----DVKFWTPGYAAPETWMSFPVTHKC 59
                A    + H   +  +      P  + +    DV    P               + 
Sbjct: 134 AMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPATMPD-------ANPQD 183

Query: 60  DVRSFGMLLFEIL-GRR 75
           D+R  G  L+ +L  R 
Sbjct: 184 DIRGIGASLYALLVNRW 200

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 22/110 (20%), Positives = 35/110 (31%), Gaps = 39/110 (35%)

Query: 4   IAIGTAEGIVSLH-----DGCQQQIIHYNIKPENILLDVKF------------------- 39
           +A  +  G+  LH        +  I H ++K +NIL+                       
Sbjct: 139 LAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE 198

Query: 40  ---------WTPGYAAPE------TWMSFPVTHKCDVRSFGMLLFEILGR 74
                     T  Y  PE          F      D+ SFG++L+E+  R
Sbjct: 199 VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 21/98 (21%), Positives = 33/98 (33%), Gaps = 29/98 (29%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK---F----------------- 39
           I       + + H        H ++KPENIL+          F                 
Sbjct: 139 IVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT 195

Query: 40  -WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-GRR 75
             T  Y APE +     T++ D+ +   +L+E L G  
Sbjct: 196 VGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSP 233

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 26/142 (18%), Positives = 47/142 (33%), Gaps = 51/142 (35%)

Query: 9   AEGIVSLHDGCQQQIIHYNIKPENILLD------------VKFW-----------TPGYA 45
              +  LH    Q ++H ++KP NI L             +               P Y 
Sbjct: 167 LLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYM 223

Query: 46  APETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG---- 101
           APE           DV S G+ + E+     +          P G +  W++L +G    
Sbjct: 224 APELLQG-SYGTAADVFSLGLTILEVACNMEL----------PHGGEG-WQQLRQGYLPP 271

Query: 102 --------EFQDLIIVCGMEKN 115
                   E + ++++  +E +
Sbjct: 272 EFTAGLSSELRSVLVMM-LEPD 292

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 27/86 (31%)

Query: 15  LHDGCQQQIIHYNIKPENILLD----VK---F-----------------WTPGYAAPETW 50
           +HD   ++I+H +IK +NI L     V+   F                  TP Y +PE  
Sbjct: 141 VHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEIC 197

Query: 51  MSFPVTHKCDVRSFGMLLFEILGRRR 76
            + P  +K D+ + G +L+E+   + 
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLKH 223

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 27/113 (23%), Positives = 35/113 (30%), Gaps = 41/113 (36%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK---FW---------------- 40
            A   A G+  LH      IIH ++   N L+     V    F                 
Sbjct: 113 FAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR 169

Query: 41  ---------------TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMR 78
                           P + APE         K DV SFG++L EI+GR    
Sbjct: 170 SLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNAD 222

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 49.7 bits (118), Expect = 4e-07
 Identities = 12/95 (12%), Positives = 31/95 (32%), Gaps = 26/95 (27%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK----------------FW 40
           +HI+         +L     + ++H +  P+N+ +     +                   
Sbjct: 196 LHILTAQLIRLAANLQS---KGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASS 252

Query: 41  TPGYAAPETWM---SFPVTHKCDVRSFGMLLFEIL 72
            P   AP  ++   +   TH  +    G+ ++ + 
Sbjct: 253 VPVTYAPREFLNASTATFTHALNAWQLGLSIYRVW 287

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 50.1 bits (119), Expect = 5e-07
 Identities = 24/90 (26%), Positives = 32/90 (35%), Gaps = 29/90 (32%)

Query: 9   AEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TP 42
           +  +  LH   + +IIH ++KPENI+L                               T 
Sbjct: 131 SSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTL 187

Query: 43  GYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
            Y APE       T   D  SFG L FE +
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECI 217

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 49.2 bits (117), Expect = 6e-07
 Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 34/100 (34%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK---F-------------WTPG 43
           + +     + SLH      ++H  ++P +I+LD    V    F              + G
Sbjct: 211 LTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRG 267

Query: 44  YAAPETWMS-----------FPVTHKCDVRSFGMLLFEIL 72
           +  PE                 +T   D  + G++++ I 
Sbjct: 268 FEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW 307

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 49.0 bits (117), Expect = 6e-07
 Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 39/110 (35%)

Query: 4   IAIGTAEGIVSLH-----DGCQQQIIHYNIKPENILLDVKF------------------- 39
           +A+ TA G+  LH        +  I H ++K +NIL+                       
Sbjct: 144 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 203

Query: 40  ---------WTPGYAAPE------TWMSFPVTHKCDVRSFGMLLFEILGR 74
                     T  Y APE          F    + D+ + G++ +EI  R
Sbjct: 204 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 48.5 bits (116), Expect = 9e-07
 Identities = 32/134 (23%), Positives = 47/134 (35%), Gaps = 45/134 (33%)

Query: 9   AEGIVSLHDGCQQQIIHYNIKPENILLD----VK---FW--------------------- 40
           AE +  LH    + ++H ++KP NI       VK   F                      
Sbjct: 128 AEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184

Query: 41  --------TPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-----GRRRMRTCQKARSG- 86
                   T  Y +PE       +HK D+ S G++LFE+L        R+RT    R+  
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLK 244

Query: 87  FPSGFKWVWKKLEK 100
           FP  F   +     
Sbjct: 245 FPPLFTQKYPCEYV 258

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 48.7 bits (116), Expect = 9e-07
 Identities = 32/221 (14%), Positives = 64/221 (28%), Gaps = 64/221 (28%)

Query: 4   IAIGTAEGIVSLH------DGCQQQIIHYNIKPENILLDVKF------------------ 39
           +A     G+  LH      D  +  I H ++   N+L+                      
Sbjct: 116 LAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRL 175

Query: 40  --------------WTPGYAAPE-------TWMSFPVTHKCDVRSFGMLLFEILGRRRMR 78
                          T  Y APE                + D+ + G++ +EI     MR
Sbjct: 176 VRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF----MR 231

Query: 79  TCQKARSGFPSGFK--WVWKKLEKGEFQDLIIVCGMEK-----NNKEKAERMALVALWR- 130
                       ++  +  +      F+D+ ++   EK         K   +A+ +L   
Sbjct: 232 CTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKET 291

Query: 131 ----VQYKPEAMPSMTVRPAKFMLHGSLASMLNVSSAMSSD 167
                    EA  +   + A+  +   L  +   + ++S  
Sbjct: 292 IEDCWDQDAEARLTA--QXAEERM-AELMMIWERNKSVSPT 329

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 26/142 (18%), Positives = 37/142 (26%), Gaps = 49/142 (34%)

Query: 9   AEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------T 41
             G+  L +     I+H NIKP NI+  +                              T
Sbjct: 122 VGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGT 178

Query: 42  PGYAAPE--------TWMSFPVTHKCDVRSFGMLLFEIL-----------GRRRMRTCQK 82
             Y  P+                   D+ S G+  +               RR      K
Sbjct: 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK 238

Query: 83  ARSGFPSGFKWVWKKLEKGEFQ 104
             +G PSG     +K E G   
Sbjct: 239 IITGKPSGAISGVQKAENGPID 260

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 48.7 bits (116), Expect = 1e-06
 Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 23/95 (24%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD---VK----------------FWTPGY 44
             +     +  LH      +++ ++KPENI+L    +K                + TPG+
Sbjct: 187 YLLEILPALSYLH---SIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYLYGTPGF 243

Query: 45  AAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRT 79
            APE   + P T   D+ + G  L  +      R 
Sbjct: 244 QAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRN 277

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 26/82 (31%)

Query: 15  LHDGCQQQIIHYNIKPENILLD----VK---F-W--------------TPGYAAPETWMS 52
           +H+  ++ I H ++KP NIL+D    VK   F                T  +  PE + +
Sbjct: 167 IHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSN 224

Query: 53  FPVTH--KCDVRSFGMLLFEIL 72
               +  K D+ S G+ L+ + 
Sbjct: 225 ESSYNGAKVDIWSLGICLYVMF 246

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 26/142 (18%), Positives = 37/142 (26%), Gaps = 49/142 (34%)

Query: 9   AEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------T 41
             G+  L +     I+H NIKP NI+  +                              T
Sbjct: 122 VGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGT 178

Query: 42  PGYAAPE--------TWMSFPVTHKCDVRSFGMLLFEIL-----------GRRRMRTCQK 82
             Y  P+                   D+ S G+  +               RR      K
Sbjct: 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK 238

Query: 83  ARSGFPSGFKWVWKKLEKGEFQ 104
             +G PSG     +K E G   
Sbjct: 239 IITGKPSGAISGVQKAENGPID 260

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 35/115 (30%)

Query: 9   AEGIVSLHDGCQQQIIHYNIKPENILLDVK-------F-W--------------TPGYAA 46
           A+ +   H   ++++IH +IKPEN+L+  K       F W              T  Y  
Sbjct: 124 ADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLP 180

Query: 47  PETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSG---FPSGF 91
           PE         K D+   G+L +E L             T ++  +    FP   
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFL 235

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 27/115 (23%), Positives = 38/115 (33%), Gaps = 35/115 (30%)

Query: 9   AEGIVSLHDGCQQQIIHYNIKPENILLDVK-------F-W--------------TPGYAA 46
           A  +   H    +++IH +IKPEN+LL          F W              T  Y  
Sbjct: 119 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 175

Query: 47  PETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSG---FPSGF 91
           PE         K D+ S G+L +E L             T ++       FP   
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 230

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 48.5 bits (115), Expect = 1e-06
 Identities = 16/99 (16%), Positives = 30/99 (30%), Gaps = 33/99 (33%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK--------------------- 38
           + +     + SLH      ++H  ++P +I+LD    V                      
Sbjct: 216 LTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRG 272

Query: 39  FWTPGYAAPETWMSFP-----VTHKCDVRSFGMLLFEIL 72
           F  P   A             +T   D  + G+ ++ I 
Sbjct: 273 FAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 25/142 (17%), Positives = 42/142 (29%), Gaps = 46/142 (32%)

Query: 8   TAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------- 40
           T  G+  LH      I+H ++KP NIL+ +                              
Sbjct: 127 TTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183

Query: 41  -----TPGYAAPE---TWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARS 85
                T G+ APE          T+  D+ S G + + ++       G+   R       
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLG 243

Query: 86  GFPSGFKWVWKKLEKGEFQDLI 107
                     K  +    ++LI
Sbjct: 244 ACSLDCLHPEKHEDV-IARELI 264

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 47.0 bits (112), Expect = 3e-06
 Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 39/110 (35%)

Query: 4   IAIGTAEGIVSLH-----DGCQQQIIHYNIKPENILLD----VK---F------------ 39
           I +  A G+  LH        +  I H ++K +NIL+                       
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 169

Query: 40  ---------WTPGYAAPE------TWMSFPVTHKCDVRSFGMLLFEILGR 74
                     T  Y APE          F    + D+ +FG++L+E+  R
Sbjct: 170 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 27/92 (29%)

Query: 9   AEGIVSLHDGCQQQIIHYNIKPENILLD----VK---F-----------------WTPGY 44
              +  +H    ++++H +IKP N+ +     VK                      TP Y
Sbjct: 146 CSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYY 202

Query: 45  AAPETWMSFPVTHKCDVRSFGMLLFEILGRRR 76
            +PE         K D+ S G LL+E+   + 
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQS 234

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 46.9 bits (111), Expect = 3e-06
 Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 47/138 (34%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
            A+     I  +HD    +IIH +IKP+N +L   F                        
Sbjct: 177 FAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDM 233

Query: 41  --------------TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSG 86
                         T G+   E   + P  ++ D       ++ +L    M+        
Sbjct: 234 KLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN----- 288

Query: 87  FPSGFKWVWKKLEKGEFQ 104
              G +   + L +    
Sbjct: 289 --EGGECKPEGLFRRLPH 304

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 46.1 bits (110), Expect = 5e-06
 Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 29/98 (29%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK---F----------------- 39
                 +GI   H     +I+H +IKP+NIL+D    +K   F                 
Sbjct: 116 FTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHV 172

Query: 40  -WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-GRR 75
             T  Y +PE           D+ S G++L+E+L G  
Sbjct: 173 LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEP 210

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 46.2 bits (110), Expect = 5e-06
 Identities = 30/142 (21%), Positives = 44/142 (30%), Gaps = 48/142 (33%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLD----VKFW------------------------- 40
           E +  +H    Q IIH ++KP NI +D    VK                           
Sbjct: 127 EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183

Query: 41  ---------TPGYAAPETWMSFPV-THKCDVRSFGMLLFEIL-----GRRRMRTCQKARS 85
                    T  Y A E          K D+ S G++ FE++     G  R+   +K RS
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRS 243

Query: 86  GFPSGFKWVWKKLEKGEFQDLI 107
                         K   + +I
Sbjct: 244 VSIEFPPDFDDNKMK-VEKKII 264

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 45.8 bits (109), Expect = 6e-06
 Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 39/100 (39%)

Query: 9   AEGIVSLHDGCQQQIIHYNIKPENILLD---VK---F-------------------WTPG 43
            E + ++H      I+H ++KP N L+    +K   F                    T  
Sbjct: 137 LEAVHTIHQ---HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 193

Query: 44  YAAPETWMSFP-----------VTHKCDVRSFGMLLFEIL 72
           Y  PE                 ++ K DV S G +L+ + 
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 233

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 45.5 bits (108), Expect = 9e-06
 Identities = 23/108 (21%), Positives = 38/108 (35%), Gaps = 40/108 (37%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VKFW------------------- 40
           I   T   +  +H   +  IIH ++K EN+LL     +K                     
Sbjct: 141 IFYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQ 199

Query: 41  -------------TPGYAAPE---TWMSFPVTHKCDVRSFGMLLFEIL 72
                        TP Y  PE    + +FP+  K D+ + G +L+ + 
Sbjct: 200 RRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLC 247

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 45.5 bits (108), Expect = 9e-06
 Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 39/100 (39%)

Query: 9   AEGIVSLHDGCQQQIIHYNIKPENILLD---VK---F-------------------WTPG 43
            E + ++H   Q  I+H ++KP N L+    +K   F                    T  
Sbjct: 118 LEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 174

Query: 44  YAAPE-----------TWMSFPVTHKCDVRSFGMLLFEIL 72
           Y  PE                 ++ K DV S G +L+ + 
Sbjct: 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 214

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 31/100 (31%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK---F----------------- 39
           +     + +   H   Q  IIH ++KP NI++     VK   F                 
Sbjct: 121 VIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177

Query: 40  ---WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-GRR 75
               T  Y +PE      V  + DV S G +L+E+L G  
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 39/105 (37%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VKFW------------------- 40
           + +G   G+ ++H    +   H ++KP NILL                            
Sbjct: 139 LLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQAL 195

Query: 41  ----------TPGYAAPETWMS---FPVTHKCDVRSFGMLLFEIL 72
                     T  Y APE +       +  + DV S G +L+ ++
Sbjct: 196 TLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 29/156 (18%), Positives = 43/156 (27%), Gaps = 61/156 (39%)

Query: 9   AEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------- 40
           A G+  LH     +IIH ++KP+NIL+                                 
Sbjct: 125 ASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181

Query: 41  -------------TPGYAAPE-------TWMSFPVTHKCDVRSFGMLLFEILGR------ 74
                        T G+ APE             +T   D+ S G + + IL +      
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241

Query: 75  ---RRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLI 107
               R     +             + L   E  DLI
Sbjct: 242 DKYSRESNIIRGIFSLDEMKCLHDRSLIA-EATDLI 276

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 24/91 (26%)

Query: 3   IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILL----DVKFW------------------ 40
            ++I   +G+  L +  + +I+H ++KP NIL+    ++K                    
Sbjct: 135 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 192

Query: 41  TPGYAAPETWMSFPVTHKCDVRSFGMLLFEI 71
           T  Y +PE       + + D+ S G+ L E+
Sbjct: 193 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 223

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 35/145 (24%), Positives = 51/145 (35%), Gaps = 53/145 (36%)

Query: 8   TAE---GIVSLHDGCQQQIIHYNIKPENILLD---------------------VKFW--- 40
            AE    I S+H   Q   +H +IKP+NIL+D                     V+     
Sbjct: 181 LAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV 237

Query: 41  -TPGYAAPETWMSFPVTHK-----CDVRSFGMLLFEIL-------GRRRMRTCQK----- 82
            TP Y +PE   +           CD  S G+ ++E+L           + T  K     
Sbjct: 238 GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK 297

Query: 83  ARSGFPSGFKWVWKKLEKGEFQDLI 107
            R  FP+    V +       +DLI
Sbjct: 298 ERFQFPTQVTDVSE-----NAKDLI 317

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 39/99 (39%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLD---VK---F-------------------WTPGY 44
           E + ++H   Q  I+H ++KP N L+    +K   F                       Y
Sbjct: 166 EAVHTIH---QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNY 222

Query: 45  AAPE-----------TWMSFPVTHKCDVRSFGMLLFEIL 72
             PE                 ++ K DV S G +L+ + 
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 29/88 (32%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLD-------------------------VKFWTPGY 44
           +G+  +H   +   +H ++KPENI+                           V   T  +
Sbjct: 266 KGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEF 322

Query: 45  AAPETWMSFPVTHKCDVRSFGMLLFEIL 72
           AAPE     PV +  D+ S G+L + IL
Sbjct: 323 AAPEVAEGKPVGYYTDMWSVGVLSY-IL 349

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 34/108 (31%)

Query: 15  LHDGCQQQIIHYNIKPENILLD----VK---F----------W----TPGYAAPETWMSF 53
           LH      +I+ ++KPEN+L+D    ++   F          W    TP   APE  +S 
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSK 213

Query: 54  PVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSG---FPSGF 91
                 D  + G+L++E+          + ++  +K  SG   FPS F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 29/124 (23%), Positives = 43/124 (34%), Gaps = 44/124 (35%)

Query: 8   TAEGIVS----LHDGCQQQIIHYNIKPENILLD----------------------VKFW- 40
           TAE IVS    LH    + IIH ++KPENILL+                       +   
Sbjct: 136 TAE-IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 191

Query: 41  ---TPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSG---F 87
              T  Y +PE           D+ + G ++++++               QK       F
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251

Query: 88  PSGF 91
           P  F
Sbjct: 252 PEKF 255

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 29/88 (32%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLD-------------------------VKFWTPGY 44
           EG+  +H   +  I+H +IKPENI+ +                         V   T  +
Sbjct: 160 EGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEF 216

Query: 45  AAPETWMSFPVTHKCDVRSFGMLLFEIL 72
           AAPE     PV    D+ + G+L + +L
Sbjct: 217 AAPEIVDREPVGFYTDMWAIGVLGY-VL 243

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 31/90 (34%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILL--------DVK-------------------FWTP 42
           +G+  LH    ++I H+++KPENI+L         +K                   F TP
Sbjct: 126 DGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182

Query: 43  GYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
            + APE     P+  + D+ S G++ + IL
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITY-IL 211

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 29/88 (32%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLD-------------------------VKFWTPGY 44
           EGI  +H   Q  I+H ++KPENIL                           V F TP +
Sbjct: 198 EGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEF 254

Query: 45  AAPETWMSFPVTHKCDVRSFGMLLFEIL 72
            APE      V+   D+ S G++ + +L
Sbjct: 255 LAPEVVNYDFVSFPTDMWSVGVIAY-ML 281

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 43.9 bits (104), Expect = 4e-05
 Identities = 34/131 (25%), Positives = 51/131 (38%), Gaps = 38/131 (29%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLD----------------VKFW----------TPG 43
            G+  LH   +  I+H ++KPEN+LL+                  F           T  
Sbjct: 147 SGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAY 203

Query: 44  YAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGFKWVWK 96
           Y APE  +      KCDV S G++LF +L       G+      +K   G  +     WK
Sbjct: 204 YIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWK 262

Query: 97  KLEKGEFQDLI 107
            + +   +DLI
Sbjct: 263 NVSE-GAKDLI 272

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 31/90 (34%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILL--------DVK-------------------FWTP 42
           +G+  LH    ++I H+++KPENI+L         +K                   F TP
Sbjct: 126 DGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182

Query: 43  GYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
            + APE     P+  + D+ S G++ + IL
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITY-IL 211

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 43.3 bits (102), Expect = 4e-05
 Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 35/95 (36%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLD---------------VKFW-------------- 40
             +  LH    Q I H +IKPEN L                  +F+              
Sbjct: 179 SALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA 235

Query: 41  -TPGYAAPE--TWMSFPVTHKCDVRSFGMLLFEIL 72
            TP + APE     +     KCD  S G+LL  +L
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLL 270

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 35/131 (26%), Positives = 50/131 (38%), Gaps = 38/131 (29%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLD----------------VKFW----------TPG 43
            GI  LH   +  I+H +IKPENILL+                  F           T  
Sbjct: 157 SGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY 213

Query: 44  YAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGFKWVWK 96
           Y APE  +      KCDV S G++++ +L       G+      +K   G        WK
Sbjct: 214 YIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWK 272

Query: 97  KLEKGEFQDLI 107
            +   E ++LI
Sbjct: 273 NISD-EAKELI 282

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 20/158 (12%), Positives = 41/158 (25%), Gaps = 66/158 (41%)

Query: 9   AEGIVSLHDGCQQQIIHYNIKPENILLD-----------------------VKFW----- 40
             G+  +H      ++H +IKP NI +                         K       
Sbjct: 125 GRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV 181

Query: 41  -----------TPGYAAPETWM-SFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFP 88
                         + A E    ++    K D+ +  + +    G   +           
Sbjct: 182 TRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----- 236

Query: 89  SGFKWVWKKLEKG-----------EFQDLIIVCGMEKN 115
                 W ++ +G           EF +L+ V  +  +
Sbjct: 237 ------WHEIRQGRLPRIPQVLSQEFTELLKVM-IHPD 267

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 30/89 (33%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILL-------DVK-------------------FWTPG 43
           EG+  LH   Q  I+H ++KP+NILL       D+K                     TP 
Sbjct: 142 EGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPE 198

Query: 44  YAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
           Y APE     P+T   D+ + G++ + +L
Sbjct: 199 YLAPEILNYDPITTATDMWNIGIIAY-ML 226

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 23/88 (26%)

Query: 8   TAEGIVSLHDGCQQQIIHYNIKPENILLD-------------VKFW----------TPGY 44
            AE    L D  +++I++ ++KPENILLD             V             T GY
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGY 351

Query: 45  AAPETWMSFPVTHKCDVRSFGMLLFEIL 72
            APE   +   T   D  + G LL+E++
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMI 379

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 43.0 bits (102), Expect = 6e-05
 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 29/88 (32%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILL------DVK-------------------FWTPGY 44
           E +  LH      I H++I+PENI+        +K                   F  P Y
Sbjct: 113 EALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEY 169

Query: 45  AAPETWMSFPVTHKCDVRSFGMLLFEIL 72
            APE      V+   D+ S G L++ +L
Sbjct: 170 YAPEVHQHDVVSTATDMWSLGTLVY-VL 196

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 26/108 (24%), Positives = 37/108 (34%), Gaps = 44/108 (40%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLDVK---------------------FW-----TPG 43
             +  LH+     IIH ++KPEN+LL  +                            TP 
Sbjct: 250 LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 306

Query: 44  YAAPE---TWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFP 88
           Y APE   +  +       D  S G++LF  L            SG+P
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICL------------SGYP 342

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 42.8 bits (101), Expect = 8e-05
 Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 38/131 (29%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLD----------------VKFW----------TPG 43
            GI  +H   + +I+H ++KPEN+LL+                  F           T  
Sbjct: 137 SGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 193

Query: 44  YAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGFKWVWK 96
           Y APE  +      KCDV S G++L+ +L       G       +K   G  +     WK
Sbjct: 194 YIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 252

Query: 97  KLEKGEFQDLI 107
           K+ +   +DLI
Sbjct: 253 KVSE-SAKDLI 262

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 29/96 (30%)

Query: 3   IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VKFW------------------ 40
            IA+   + +  LH   +  +IH ++KP N+L++    VK                    
Sbjct: 113 KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170

Query: 41  -TPGYAAPE----TWMSFPVTHKCDVRSFGMLLFEI 71
               Y APE           + K D+ S G+ + E+
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 31/90 (34%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILL--------DVK-------------------FWTP 42
           +G+  LH    ++I H+++KPENI+L         +K                   F TP
Sbjct: 119 DGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP 175

Query: 43  GYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
            + APE     P+  + D+ S G++ + IL
Sbjct: 176 EFVAPEIVNYEPLGLEADMWSIGVITY-IL 204

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 29/96 (30%)

Query: 3   IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK---FW--------------- 40
            I + T + +  L +    +IIH +IKP NILLD    +K   F                
Sbjct: 129 KITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA 186

Query: 41  -TPGYAAPE----TWMSFPVTHKCDVRSFGMLLFEI 71
               Y APE    +        + DV S G+ L+E+
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYEL 222

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 30/88 (34%)

Query: 15  LHDGCQQQIIHYNIKPENILLDV------------KFW-----------TPGYAAPETWM 51
           L     Q+IIH ++KP+NILLD                           T  Y APE + 
Sbjct: 131 LQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFS 187

Query: 52  SFPVT-HKCDVR--SFGMLLFEIL-GRR 75
           S     +   V   S G+  +E+L GRR
Sbjct: 188 SRKGAGYSFAVDWWSLGVTAYELLRGRR 215

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 27/82 (32%)

Query: 15  LHDGCQQQIIHYNIKPENILLD----VK---F-W----------------TPGYAAPETW 50
           LH      I+H ++   N+LL     +K   F                  TP Y +PE  
Sbjct: 128 LH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIA 184

Query: 51  MSFPVTHKCDVRSFGMLLFEIL 72
                  + DV S G + + +L
Sbjct: 185 TRSAHGLESDVWSLGCMFYTLL 206

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 38/131 (29%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLD----------------VKFW----------TPG 43
            GI  +H   +  I+H ++KPENILL+                  F           T  
Sbjct: 132 SGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188

Query: 44  YAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGFKWVWK 96
           Y APE  +      KCDV S G++L+ +L       G+      ++  +G  +     W+
Sbjct: 189 YIAPEV-LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR 247

Query: 97  KLEKGEFQDLI 107
            +   + +DLI
Sbjct: 248 TISD-DAKDLI 257

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 23/92 (25%), Positives = 33/92 (35%), Gaps = 33/92 (35%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLDVK---------------------FW-----TPG 43
             +  LH+     IIH ++KPEN+LL  +                            TP 
Sbjct: 125 LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 181

Query: 44  YAAPE---TWMSFPVTHKCDVRSFGMLLFEIL 72
           Y APE   +  +       D  S G++LF I 
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILF-IC 212

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 29/90 (32%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLDVKFWTPG-------------------------- 43
            G+  +H  C   IIH +IKPEN+L+++                                
Sbjct: 142 LGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 199

Query: 44  -YAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
            Y +PE  +  P     D+ S   L+FE++
Sbjct: 200 EYRSPEVLLGAPWGCGADIWSTACLIFELI 229

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 31/90 (34%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILL--------DVK-------------------FWTP 42
            G+  LH     QI H+++KPENI+L         +K                   F TP
Sbjct: 125 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181

Query: 43  GYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
            + APE     P+  + D+ S G++ + IL
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITY-IL 210

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 25/86 (29%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLD-----VK---FW---------------TPGYAA 46
           +G+  LH      IIH ++K +NI +      VK                    TP + A
Sbjct: 140 KGLQFLHT-RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMA 198

Query: 47  PETWMSFPVTHKCDVRSFGMLLFEIL 72
           PE +         DV +FGM + E+ 
Sbjct: 199 PEMYEE-KYDESVDVYAFGMCMLEMA 223

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 26/79 (32%)

Query: 19  CQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPV 55
               ++H +IK ENIL+D+                          T  Y+ PE W+ +  
Sbjct: 166 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE-WIRYHR 224

Query: 56  TH--KCDVRSFGMLLFEIL 72
            H     V S G+LL++++
Sbjct: 225 YHGRSAAVWSLGILLYDMV 243

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 34/108 (31%)

Query: 15  LHDGCQQQIIHYNIKPENILLD----VK---F----------W----TPGYAAPETWMSF 53
           LH    + II+ ++KPENILLD    +K   F          +    TP Y APE   + 
Sbjct: 122 LHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTK 178

Query: 54  PVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSG---FPSGF 91
           P     D  SFG+L++E+L           M+T +K  +    FP  F
Sbjct: 179 PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFF 226

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 29/94 (30%)

Query: 8   TAEGIVSLHDGCQQQIIHYNIKPENILLD---------------------VKFW----TP 42
           TAE +++L        IH ++KP+N+LLD                     V+      TP
Sbjct: 174 TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 233

Query: 43  GYAAPETWMSFPVTHK----CDVRSFGMLLFEIL 72
            Y +PE   S          CD  S G+ L+E+L
Sbjct: 234 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 6/33 (18%), Positives = 15/33 (45%), Gaps = 8/33 (24%)

Query: 113 EKNNKEKAE-RMALVALWRVQYKPEAMPSMTVR 144
           EK   +K +  + L       Y  ++ P++ ++
Sbjct: 18  EKQALKKLQASLKL-------YADDSAPALAIK 43

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 30/97 (30%)

Query: 3   IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK---FW--------------- 40
            + +   + +  L +  +  +IH ++KP NILLD    +K   F                
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185

Query: 41  -TPGYAAPE-----TWMSFPVTHKCDVRSFGMLLFEI 71
               Y APE              + DV S G+ L E+
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVEL 222

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 31/147 (21%), Positives = 47/147 (31%), Gaps = 55/147 (37%)

Query: 8   TAE---GIVSLHDGCQQQIIHYNIKPENILLD---------------------VKFW--- 40
            AE    I S+H   +   +H +IKP+NILLD                     V+     
Sbjct: 168 LAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV 224

Query: 41  -TPGYAAPE-------TWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQK--- 82
            TP Y +PE          +     +CD  + G+  +E+              T  K   
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH 284

Query: 83  --ARSGFPSGFKWVWKKLEKGEFQDLI 107
                  P   + V +     E +D I
Sbjct: 285 YKEHLSLPLVDEGVPE-----EARDFI 306

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 33/92 (35%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLD----VK-------------------FWTPGYAA 46
           E I +LH      I+H ++KPENILLD    +K                     TP Y A
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLA 191

Query: 47  PE------TWMSFPVTHKCDVRSFGMLLFEIL 72
           PE               + D+ S G++++  L
Sbjct: 192 PEIIECSMNDNHPGYGKEVDMWSTGVIMY-TL 222

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 26/79 (32%)

Query: 19  CQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPV 55
             + ++H +IK ENIL+D++                         T  Y+ PE W+S   
Sbjct: 156 HSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPE-WISRHQ 214

Query: 56  TH--KCDVRSFGMLLFEIL 72
            H     V S G+LL++++
Sbjct: 215 YHALPATVWSLGILLYDMV 233

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 30/92 (32%)

Query: 8   TAE---GIVSLHDGCQQQIIHYNIKPENILLD----VKFW-------------------- 40
           TA+   G+  LH   Q+ II+ ++KPEN+LLD    V+                      
Sbjct: 295 TAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351

Query: 41  TPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
           TPG+ APE  +        D  + G+ L+E++
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMI 383

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 40.2 bits (95), Expect = 4e-04
 Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 30/89 (33%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLDVK---------------------FW-----TPG 43
           E I   H      I+H N+KPEN+LL  K                      W     TPG
Sbjct: 116 ESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG 172

Query: 44  YAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
           Y +PE     P +   D+ + G++L+ IL
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILY-IL 200

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 27/82 (32%)

Query: 15  LHDGCQQQIIHYNIKPENILLD----VK---F-W----------------TPGYAAPETW 50
           LH   + ++IH ++K  N+ L+    VK   F                  TP Y APE  
Sbjct: 157 LH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL 213

Query: 51  MSFPVTHKCDVRSFGMLLFEIL 72
                + + DV S G +++ +L
Sbjct: 214 SKKGHSFEVDVWSIGCIMYTLL 235

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 30/90 (33%)

Query: 9   AEGIVSLHDGCQQQIIHYNIKPENILL-------DVK-------------------FWTP 42
            E +  LH+     I+H ++KPEN+L         +K                     TP
Sbjct: 158 LEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTP 214

Query: 43  GYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
           GY APE         + D+ S G++ + IL
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIITY-IL 243

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 27/82 (32%)

Query: 15  LHDGCQQQIIHYNIKPENILLD----VK---F-W----------------TPGYAAPETW 50
           LH   + ++IH ++K  N+ L+    VK   F                  TP Y APE  
Sbjct: 131 LH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL 187

Query: 51  MSFPVTHKCDVRSFGMLLFEIL 72
                + + DV S G +++ +L
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLL 209

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 22/89 (24%), Positives = 32/89 (35%), Gaps = 29/89 (32%)

Query: 9   AEGIVSLHDGCQQQIIHYNIKPENILLD----------------VKFW---------TPG 43
              +  LH+     I+H ++KPEN+L                               TPG
Sbjct: 116 LSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPG 172

Query: 44  YAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
           Y APE     P +   D  S G++ + IL
Sbjct: 173 YVAPEVLAQKPYSKAVDCWSIGVITY-IL 200

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 40.0 bits (94), Expect = 6e-04
 Identities = 23/90 (25%), Positives = 32/90 (35%), Gaps = 31/90 (34%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLD----------------VKFW-----------TP 42
           E +   HD     IIH ++KP  +LL                 ++             TP
Sbjct: 141 EALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 197

Query: 43  GYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
            + APE     P     DV   G++LF IL
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILF-IL 226

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 39.7 bits (93), Expect = 7e-04
 Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 33/92 (35%)

Query: 10  EGIVSLHDGCQQQIIHYNIKPENILLD----VK--------------FW-----TPGYAA 46
           E +  LH      I+H ++KPENILLD    ++                     TPGY A
Sbjct: 211 EAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLA 267

Query: 47  PE------TWMSFPVTHKCDVRSFGMLLFEIL 72
           PE               + D+ + G++LF  L
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILF-TL 298

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 39.9 bits (93), Expect = 7e-04
 Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 29/91 (31%)

Query: 8   TAE---GIVSLHDGCQQQIIHYNIKPENILLDV------------KFW----------TP 42
            AE   G+  +H    + +++ ++KP NILLD               +          T 
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH 354

Query: 43  GYAAPETWMS-FPVTHKCDVRSFGMLLFEIL 72
           GY APE            D  S G +LF++L
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	291
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.97
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.97
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.97
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.97
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.97
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.97
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.96
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.95
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.95
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.95
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.95
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.94
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.94
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.94
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.93
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.93
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.93
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.93
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.92
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.92
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.92
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.92
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.92
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.92
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.92
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.92
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.92
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.92
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.92
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.92
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.92
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.92
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.92
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.92
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.92
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.92
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.92
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.92
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.92
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.91
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.91
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.91
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.91
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.91
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.91
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.91
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.91
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.91
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.91
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.91
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.91
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.91
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.91
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.91
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.91
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.91
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.91
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.91
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.91
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.91
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.91
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.91
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.91
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.91
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.91
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.91
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.91
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.91
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.91
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.91
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.91
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.91
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.91
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.91
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.91
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.91
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.9
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.9
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.9
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.9
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.9
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.9
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.9
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.9
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.9
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.9
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.9
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.9
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.9
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.9
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.9
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.9
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.9
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.9
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.9
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.9
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.9
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.9
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.9
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.9
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.9
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.9
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.9
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.9
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.9
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.9
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.9
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.9
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.9
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.9
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.9
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.9
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.9
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.9
3niz_A	311	Rhodanese family protein; structural genomics, str	99.9
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.9
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.9
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.9
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.9
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.9
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.9
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.9
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.9
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.9
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.89
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.89
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.89
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.89
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.89
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.89
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.89
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.89
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.89
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.89
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.89
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.89
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.89
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.89
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.89
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.89
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.89
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.89
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.89
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.89
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.89
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.89
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.89
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.89
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.89
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.89
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.89
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.89
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.89
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.89
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.89
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.89
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.89
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.89
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.89
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.89
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.88
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.88
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.88
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.88
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.88
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.88
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.88
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.88
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.88
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.88
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.88
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.88
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.88
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.88
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.88
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.88
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.88
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.88
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.88
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.88
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.88
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.88
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.88
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.88
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.88
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.88
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.88
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.88
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.88
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.88
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.88
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.88
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.88
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.88
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.88
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.88
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.88
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.88
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.88
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.88
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.88
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.88
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.88
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.88
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.88
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.88
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.88
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.87
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.87
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.87
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.87
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.87
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.87
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.87
3bhy_A	283	Death-associated protein kinase 3; death associate	99.87
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.87
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.87
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.87
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.87
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.87
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.87
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.87
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.87
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.87
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.87
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.87
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.87
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.87
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.87
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.86
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.86
3uqc_A	286	Probable conserved transmembrane protein; structur	99.86
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.86
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.86
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.86
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.86
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.86
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.86
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.85
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.85
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.85
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.85
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.85
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.83
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.83
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.82
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.72
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.51
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.15
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.75
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.34
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.12
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	97.01
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	96.97
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	96.23
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	96.22
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	96.03
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	95.92
4aoj_A	329	High affinity nerve growth factor receptor; transf	95.63
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	95.5
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	95.45
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	95.39
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	95.33
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	94.7
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	94.7
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	94.66
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	94.56
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	94.55
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	93.69
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	93.5
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	93.16
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	93.13
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	93.12
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	93.09
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	93.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	92.85
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	92.55
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	92.51
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	92.5
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	92.47
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	92.2
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	92.07
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	92.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	91.99
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	91.92
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	91.64
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	91.62
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	91.44
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	91.41
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	91.37
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	91.31
3soc_A	322	Activin receptor type-2A; structural genomics cons	91.16
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	90.91
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	90.82
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	90.81
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	90.8
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	90.65
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	90.49
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	90.49
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	90.38
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	90.31
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	90.07
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	90.05
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	89.93
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	89.91
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	89.67
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	89.62
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	89.59
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	89.54
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	89.51
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	89.47
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	89.46
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	89.44
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	89.42
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	89.39
3uqc_A	286	Probable conserved transmembrane protein; structur	89.32
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	89.3
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	89.29
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	89.25
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	89.22
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	89.09
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	89.08
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	89.03
3an0_A	340	Dual specificity mitogen-activated protein kinase;	88.91
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	88.84
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	88.75
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	88.72
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	88.6
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	88.56
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	88.54
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	88.5
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	88.48
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	88.38
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	88.33
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	88.3
3pls_A	298	Macrophage-stimulating protein receptor; protein k	88.29
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	88.26
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	88.25
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	88.22
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	88.12
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	88.11
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	88.03
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	88.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	87.99
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	87.97
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	87.94
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	87.88
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	87.87
3niz_A	311	Rhodanese family protein; structural genomics, str	87.85
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	87.85
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	87.83
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	87.76
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	87.75
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	87.71
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	87.71
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	87.7
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	87.7
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	87.68
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	87.65
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	87.57
3aln_A	327	Dual specificity mitogen-activated protein kinase;	87.55
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	87.5
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	87.41
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	87.41
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	87.35
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	87.35
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	87.32
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	87.31
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	87.23
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	87.22
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	87.21
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	87.17
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	87.17
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	87.15
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	87.1
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	87.04
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	87.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	86.94
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	86.86
2dyl_A	318	Dual specificity mitogen-activated protein kinase	86.81
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	86.77
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	86.76
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	86.73
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	86.73
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	86.72
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	86.71
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	86.69
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	86.65
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	86.63
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	86.61
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	86.56
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	86.55
3ork_A	311	Serine/threonine protein kinase; structural genomi	86.54
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	86.48
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	86.46
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	86.32
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	86.27
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	86.24
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	86.16
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	85.93
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	85.91
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	85.77
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	85.71
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	85.59
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	85.56
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	85.34
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	85.25
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	85.22
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	85.19
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	85.15
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	85.06
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	85.05
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	85.02
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	85.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	84.92
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	84.88
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	84.82
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	84.8
3rp9_A	458	Mitogen-activated protein kinase; structural genom	84.79
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	84.79
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	84.67
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	84.65
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	84.63
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	84.51
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	84.51
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	84.49
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	84.43
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	84.38
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	84.34
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	84.33
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	84.22
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	84.12
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	84.01
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	83.95
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	83.85
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	83.81
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	83.8
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	83.68
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	83.61
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	83.56
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	83.49
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	83.4
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	83.32
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	83.27
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	83.19
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	83.09
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	82.96
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	82.87
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	82.8
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	82.67
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	82.04
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	81.85
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	81.82
2a19_B	284	Interferon-induced, double-stranded RNA-activated	81.81
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	81.7
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	81.4
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	81.21
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	80.91
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	80.39
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	80.2
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	80.05

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.97  E-value=7.9e-34  Score=247.66  Aligned_cols=134  Identities=18%  Similarity=0.185  Sum_probs=109.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++|+.|||.||+|||+   ++||||||||+||||+.++.                          |+.|||||++.+..+
T Consensus       161 ~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~  237 (329)
T 4aoj_A          161 LAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKF  237 (329)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCC
Confidence            5799999999999999   99999999999999997643                          778999999999999


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||+| |+.||......        .+...+..+..         .+.+..++..+.+|+.+||+.|
T Consensus       238 ~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--------~~~~~i~~g~~---------~~~p~~~~~~~~~li~~cl~~d  300 (329)
T 4aoj_A          238 TTESDVWSFGVVLWEIFTYGKQPWYQLSNT--------EAIDCITQGRE---------LERPRACPPEVYAIMRGCWQRE  300 (329)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--------HHHHHHHHTCC---------CCCCTTCCHHHHHHHHHHCCSS
T ss_pred             CccccccchHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHcCCC---------CCCcccccHHHHHHHHHHcCcC
Confidence            999999999999999998 89999755421        12222322211         1223345678899999999999


Q ss_pred             CCCCCCCCccchhhhhhcccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      |++||||.||  ++.|+.+.+.+
T Consensus       301 P~~RPs~~ei--~~~L~~l~~~p  321 (329)
T 4aoj_A          301 PQQRHSIKDV--HARLQALAQAP  321 (329)
T ss_dssp             TTTSCCHHHH--HHHHHHHHHSC
T ss_pred             hhHCcCHHHH--HHHHHHHhhCC
Confidence            9999999999  99999886653

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.97  E-value=5.5e-34  Score=246.49  Aligned_cols=131  Identities=15%  Similarity=0.151  Sum_probs=108.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++|+.|||.||+|||+   ++||||||||+||||+.++.                          |+.|||||++.++.+
T Consensus       148 ~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~  224 (308)
T 4gt4_A          148 VHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKF  224 (308)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCC
Confidence            5799999999999999   99999999999999987643                          678999999999999


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||+| |..||......        .+...+..+..         .+.+.+++..+.+|+.+||+.|
T Consensus       225 s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--------~~~~~i~~~~~---------~~~p~~~~~~~~~li~~C~~~d  287 (308)
T 4gt4_A          225 SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--------DVVEMIRNRQV---------LPCPDDCPAWVYALMIECWNEF  287 (308)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--------HHHHHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CccchhhhHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCC---------CCCcccchHHHHHHHHHHcCCC
Confidence            999999999999999998 89998755421        22333333222         2233456678899999999999


Q ss_pred             CCCCCCCCccchhhhhhccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~  154 (291)
                      |++||||.||  ++.|+...
T Consensus       288 P~~RPs~~ei--~~~L~a~~  305 (308)
T 4gt4_A          288 PSRRPRFKDI--HSRLRAWG  305 (308)
T ss_dssp             GGGSCCHHHH--HHHHHTSC
T ss_pred             hhHCcCHHHH--HHHHHhcc
Confidence            9999999999  99998653

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.97  E-value=4.2e-34  Score=246.22  Aligned_cols=133  Identities=20%  Similarity=0.238  Sum_probs=109.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++|+.|||.||+|||+   ++||||||||+||||+.++.                          |+.|||||++.+..+
T Consensus       131 ~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~  207 (299)
T 4asz_A          131 LHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKF  207 (299)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCC
Confidence            5799999999999999   99999999999999997654                          778999999999999


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||+| |+.||......        .+...+..+..         .+.+..++..+.+|+.+||+.|
T Consensus       208 ~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--------~~~~~i~~~~~---------~~~p~~~~~~~~~li~~cl~~d  270 (299)
T 4asz_A          208 TTESDVWSLGVVLWEIFTYGKQPWYQLSNN--------EVIECITQGRV---------LQRPRTCPQEVYELMLGCWQRE  270 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHHTCC---------CCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHcCCC---------CCCCccchHHHHHHHHHHcCCC
Confidence            999999999999999998 89999765421        22333333322         1223345678899999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |++||||.+|  ++.|+++...
T Consensus       271 P~~RPs~~~i--~~~L~~~~~~  290 (299)
T 4asz_A          271 PHMRKNIKGI--HTLLQNLAKA  290 (299)
T ss_dssp             GGGSCCHHHH--HHHHHHHHHH
T ss_pred             hhHCcCHHHH--HHHHHHHHhc
Confidence            9999999999  9999887553

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.97  E-value=1.6e-33  Score=242.85  Aligned_cols=138  Identities=23%  Similarity=0.217  Sum_probs=107.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccC---
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMS---   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~---   52 (291)
                      ++|+.|||.||+|||+   ++||||||||+||||+.++.                          |+.|||||++.+   
T Consensus       135 ~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~  211 (307)
T 3omv_A          135 IDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN  211 (307)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSS
T ss_pred             HHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCC
Confidence            5799999999999999   99999999999999986632                          889999999864   


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..|+.++|||||||++|||+||+.||.....       ...+...+..+...    + .....+..++..+.+|+.+||+
T Consensus       212 ~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~-------~~~~~~~~~~~~~~----p-~~~~~~~~~~~~l~~li~~cl~  279 (307)
T 3omv_A          212 NPFSFQSDVYSYGIVLYELMTGELPYSHINN-------RDQIIFMVGRGYAS----P-DLSKLYKNCPKAMKRLVADCVK  279 (307)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-------HHHHHHHHHTTCCC----C-CSTTSCTTSCHHHHHHHHHHTC
T ss_pred             CCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh-------HHHHHHHHhcCCCC----C-CcccccccchHHHHHHHHHHcC
Confidence            4689999999999999999999999975432       12222222222111    0 1112234456788999999999


Q ss_pred             cCCCCCCCCCccchhhhhhccccc
Q 022858          133 YKPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       133 ~~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      .||++||||.||  ++.|+.+...
T Consensus       280 ~dP~~RPs~~ei--~~~Le~l~~~  301 (307)
T 3omv_A          280 KVKEERPLFPQI--LSSIELLQHS  301 (307)
T ss_dssp             SSSTTSCCHHHH--HHHHHHHHTT
T ss_pred             CCHhHCcCHHHH--HHHHHHHhcc
Confidence            999999999999  9988776543

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.97  E-value=5.7e-33  Score=244.23  Aligned_cols=134  Identities=25%  Similarity=0.255  Sum_probs=108.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|||.||+|||+   ++||||||||+|||++.++.                          |+.|||||++.+..|
T Consensus       188 ~~~~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y  264 (353)
T 4ase_A          188 ICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY  264 (353)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHhHhh---CCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCC
Confidence            5689999999999999   99999999999999987643                          778999999999999


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||+| |+.||......       +.+...+..+...         +.+..++..+.+++.+||+.|
T Consensus       265 ~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~-------~~~~~~i~~g~~~---------~~p~~~~~~~~~li~~c~~~d  328 (353)
T 4ase_A          265 TIQSDVWSFGVLLWEIFSLGASPYPGVKID-------EEFCRRLKEGTRM---------RAPDYTTPEMYQTMLDCWHGE  328 (353)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-------HHHHHHHHHTCCC---------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             CCcccEeehHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHHcCCCC---------CCCccCCHHHHHHHHHHcCcC
Confidence            999999999999999998 89999754422       2233333333221         222334567889999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |++|||+.||  ++.|+.+.+.
T Consensus       329 P~~RPt~~ei--l~~L~~llq~  348 (353)
T 4ase_A          329 PSQRPTFSEL--VEHLGNLLQA  348 (353)
T ss_dssp             GGGSCCHHHH--HHHHHHHHHH
T ss_pred             hhHCcCHHHH--HHHHHHHHHH
Confidence            9999999999  9998877543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.97  E-value=1.2e-31  Score=231.87  Aligned_cols=148  Identities=20%  Similarity=0.122  Sum_probs=107.6

Q ss_pred             hhHHHHHHHHHHHHhcCC-----CCCeEeecCCCCcEEEccCCC----------------------------CCccccCc
Q 022858            2 HIIAIGTAEGIVSLHDGC-----QQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPE   48 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~-----~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE   48 (291)
                      ++|+.|+|.||+|||+.+     .++||||||||+||||+.++.                            |+.|||||
T Consensus       103 ~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE  182 (303)
T 3hmm_A          103 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE  182 (303)
T ss_dssp             HHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHH
Confidence            578999999999999832     249999999999999997654                            78999999


Q ss_pred             cccCC------CCccccceechhHHHHHHhhCCCccccccccCCC-------CchhHHHHHHhhcCccchhhhhccc-cc
Q 022858           49 TWMSF------PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGF-------PSGFKWVWKKLEKGEFQDLIIVCGM-EK  114 (291)
Q Consensus        49 ~~~~~------~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-~~  114 (291)
                      ++.+.      .++.++|||||||++|||+||.+|+......+..       ...............+    ++... ..
T Consensus       183 ~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----rp~~p~~~  258 (303)
T 3hmm_A          183 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL----RPNIPNRW  258 (303)
T ss_dssp             HHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC----CCCCCGGG
T ss_pred             HhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccC----CCCCCccc
Confidence            98754      4788999999999999999999887544322110       0111222222222111    11111 11


Q ss_pred             chHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcccc
Q 022858          115 NNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       115 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ...+++..+.+|+.+||+.||++||||.||  ++.|+++.+
T Consensus       259 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ei--~~~L~~l~~  297 (303)
T 3hmm_A          259 QSCEALRVMAKIMRECWYANGAARLTALRI--KKTLSQLSQ  297 (303)
T ss_dssp             GSSHHHHHHHHHHHTTCCSSGGGSCCHHHH--HHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHcccCHhHCcCHHHH--HHHHHHHHH
Confidence            234567788999999999999999999999  999987654

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.97  E-value=2e-31  Score=232.15  Aligned_cols=134  Identities=19%  Similarity=0.111  Sum_probs=105.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------------CCccccCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------------TPGYAAPETWM   51 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------------t~~y~aPE~~~   51 (291)
                      ..|+.||+.||+|||+   ++||||||||+||||+.++.                              |+.|||||++.
T Consensus       153 ~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~  229 (336)
T 4g3f_A          153 LYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM  229 (336)
T ss_dssp             HHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHC
Confidence            4689999999999999   99999999999999986542                              78899999999


Q ss_pred             CCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcc
Q 022858           52 SFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRV  131 (291)
Q Consensus        52 ~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  131 (291)
                      +..|+.++|||||||++|||+||+.||.......    +...+    ..+..       .....+...+..+.+++.+||
T Consensus       230 ~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~----~~~~i----~~~~~-------~~~~~~~~~s~~~~~li~~~L  294 (336)
T 4g3f_A          230 GKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP----LCLKI----ASEPP-------PIREIPPSCAPLTAQAIQEGL  294 (336)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC----CHHHH----HHSCC-------GGGGSCTTSCHHHHHHHHHHT
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH----HHHHH----HcCCC-------CchhcCccCCHHHHHHHHHHc
Confidence            9999999999999999999999999997654321    11111    11110       001122344567889999999


Q ss_pred             ccCCCCCCCCCccchhhhhhcccc
Q 022858          132 QYKPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       132 ~~~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      +.||++|||+.|+  ++.|.....
T Consensus       295 ~~dP~~R~sa~el--~~~l~~~l~  316 (336)
T 4g3f_A          295 RKEPVHRASAMEL--RRKVGKALQ  316 (336)
T ss_dssp             CSSGGGSCCHHHH--HHHHHHHHH
T ss_pred             cCCHhHCcCHHHH--HHHHHHHHh
Confidence            9999999999999  888766544

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.96  E-value=4.7e-31  Score=230.85  Aligned_cols=131  Identities=21%  Similarity=0.263  Sum_probs=103.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.|+.||+.||+|||+   ++||||||||+||||+.++.                        |+.|||||++.+..|+.
T Consensus       128 ~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~  204 (350)
T 4b9d_A          128 LDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNN  204 (350)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCH
T ss_pred             HHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCc
Confidence            4688999999999999   99999999999999997754                        99999999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||+||++|||+||+.||......        .+...+..+...         +.+...+..+.+|+.+||+.||++
T Consensus       205 ~~DiwSlGvilyemltG~~PF~~~~~~--------~~~~~i~~~~~~---------~~~~~~s~~~~~li~~~L~~dP~~  267 (350)
T 4b9d_A          205 KSDIWALGCVLYELCTLKHAFEAGSMK--------NLVLKIISGSFP---------PVSLHYSYDLRSLVSQLFKRNPRD  267 (350)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHTCCC---------CCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHcCCCC---------CCCccCCHHHHHHHHHHccCChhH
Confidence            999999999999999999999755421        122222222221         112233467889999999999999


Q ss_pred             CCCCCccchhhhhhc
Q 022858          138 MPSMTVRPAKFMLHG  152 (291)
Q Consensus       138 RPs~~~v~~~~~L~~  152 (291)
                      |||+.|+....++.+
T Consensus       268 R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          268 RPSVNSILEKGFIAK  282 (350)
T ss_dssp             SCCHHHHHTSHHHHT
T ss_pred             CcCHHHHhcCHHhhc
Confidence            999999932233443

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.96  E-value=5e-30  Score=219.49  Aligned_cols=124  Identities=19%  Similarity=0.217  Sum_probs=96.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCC--eEeecCCCCcEEEcc-CCC----------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQ--IIHYNIKPENILLDV-KFW----------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~--ivH~Dlkp~NIll~~-~~~----------------------t~~y~aPE~~~~~~~~   56 (291)
                      ..|+.||+.||+|||+   ++  ||||||||+||||+. ++.                      |+.|||||++.+ .|+
T Consensus       132 ~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~-~y~  207 (290)
T 3fpq_A          132 RSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYD  207 (290)
T ss_dssp             HHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCC
T ss_pred             HHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcCC-CCC
Confidence            4688999999999999   66  999999999999974 332                      999999998865 699


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++|||||||++|||+||+.||.....       ...+...+..+......+        ...+..+.+++.+||+.||+
T Consensus       208 ~~~DiwSlGvilyelltg~~Pf~~~~~-------~~~~~~~i~~~~~~~~~~--------~~~~~~~~~li~~~L~~dP~  272 (290)
T 3fpq_A          208 ESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRRVTSGVKPASFD--------KVAIPEVKEIIEGCIRQNKD  272 (290)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHHHTTTCCCGGGG--------GCCCHHHHHHHHHHSCSSGG
T ss_pred             cHHHHHHHHHHHHHHHHCCCCCCCCCc-------HHHHHHHHHcCCCCCCCC--------ccCCHHHHHHHHHHccCChh
Confidence            999999999999999999999964432       122333333322211111        11234678899999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +|||+.|+
T Consensus       273 ~R~s~~e~  280 (290)
T 3fpq_A          273 ERYSIKDL  280 (290)
T ss_dssp             GSCCHHHH
T ss_pred             HCcCHHHH
Confidence            99999998

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.96  E-value=9.1e-30  Score=222.36  Aligned_cols=133  Identities=19%  Similarity=0.204  Sum_probs=103.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..|+.||+.||+|||+   ++||||||||+||||+.++.                        |+.|||||++.+..|+.
T Consensus       173 ~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~  249 (346)
T 4fih_A          173 AAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGP  249 (346)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCc
Confidence            4688999999999999   99999999999999987653                        89999999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||+||++|||++|+.||......        .+...+.......       ..........+.+|+.+||+.||++
T Consensus       250 ~~DiWSlGvilyeml~G~~PF~~~~~~--------~~~~~i~~~~~~~-------~~~~~~~s~~~~dli~~~L~~dP~~  314 (346)
T 4fih_A          250 EVDIWSLGIMVIEMVDGEPPYFNEPPL--------KAMKMIRDNLPPR-------LKNLHKVSPSLKGFLDRLLVRDPAQ  314 (346)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHSSCCC-------CSCGGGSCHHHHHHHHHHSCSSTTT
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHcCCCCC-------CCccccCCHHHHHHHHHHcCCChhH
Confidence            999999999999999999999754321        1122222211111       1112233467889999999999999


Q ss_pred             CCCCCccchhhhhhc
Q 022858          138 MPSMTVRPAKFMLHG  152 (291)
Q Consensus       138 RPs~~~v~~~~~L~~  152 (291)
                      |||+.|+....++.+
T Consensus       315 R~ta~e~l~Hp~~~~  329 (346)
T 4fih_A          315 RATAAELLKHPFLAK  329 (346)
T ss_dssp             SCCHHHHTTCGGGGG
T ss_pred             CcCHHHHhcCHhhcC
Confidence            999999943445543

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.95  E-value=6.3e-30  Score=217.11  Aligned_cols=129  Identities=23%  Similarity=0.260  Sum_probs=99.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCC-cc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPV-TH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~-~~   57 (291)
                      ..++.||+.||+|||+   ++|+||||||+|||++.++.                       |+.|||||++.+..+ +.
T Consensus       115 ~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~  191 (275)
T 3hyh_A          115 RRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP  191 (275)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC---------------CTTSCHHHHSSSSCCCT
T ss_pred             HHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCC
Confidence            4688999999999999   99999999999999987654                       899999999998876 57


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||+||++|||+||+.||.....        ..+...+..+...          .+......+.+++.+||+.||++
T Consensus       192 ~~DiwSlGvily~lltg~~PF~~~~~--------~~~~~~i~~~~~~----------~p~~~s~~~~~li~~~L~~dP~~  253 (275)
T 3hyh_A          192 EVDVWSCGVILYVMLCRRLPFDDESI--------PVLFKNISNGVYT----------LPKFLSPGAAGLIKRMLIVNPLN  253 (275)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCC----------CCTTSCHHHHHHHHHHSCSSGGG
T ss_pred             hhhhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCCC----------CCCCCCHHHHHHHHHHccCChhH
Confidence            89999999999999999999975432        1122222222111          11123456788999999999999


Q ss_pred             CCCCCccchhhhhh
Q 022858          138 MPSMTVRPAKFMLH  151 (291)
Q Consensus       138 RPs~~~v~~~~~L~  151 (291)
                      |||+.|+....+++
T Consensus       254 R~s~~eil~hpw~k  267 (275)
T 3hyh_A          254 RISIHEIMQDDWFK  267 (275)
T ss_dssp             SCCHHHHHHCHHHH
T ss_pred             CcCHHHHHcCcccc
Confidence            99999993333454

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.95  E-value=1.4e-29  Score=218.00  Aligned_cols=122  Identities=17%  Similarity=0.245  Sum_probs=98.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ..|+.||+.||+|||+   ++||||||||+|||++.++.                          |+.|||||++.+..|
T Consensus       135 ~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y  211 (311)
T 4aw0_A          135 RFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA  211 (311)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCB
T ss_pred             HHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCC
Confidence            3588999999999999   99999999999999986643                          889999999999999


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||+||++|||++|+.||......        .+...+..+...          .+......+.+|+.+||+.||
T Consensus       212 ~~~~DiWSlGvilyeml~G~~PF~~~~~~--------~~~~~i~~~~~~----------~p~~~s~~~~dli~~lL~~dp  273 (311)
T 4aw0_A          212 CKSSDLWALGCIIYQLVAGLPPFRAGNEG--------LIFAKIIKLEYD----------FPEKFFPKARDLVEKLLVLDA  273 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCC----------CCTTCCHHHHHHHHHHSCSSG
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCC----------CCcccCHHHHHHHHHHccCCH
Confidence            99999999999999999999999754321        122222222211          111223567889999999999


Q ss_pred             CCCCCCCcc
Q 022858          136 EAMPSMTVR  144 (291)
Q Consensus       136 ~~RPs~~~v  144 (291)
                      ++|||+.|+
T Consensus       274 ~~R~t~~e~  282 (311)
T 4aw0_A          274 TKRLGCEEM  282 (311)
T ss_dssp             GGSTTSGGG
T ss_pred             hHCcChHHH
Confidence            999999987

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.95  E-value=3.3e-29  Score=224.01  Aligned_cols=133  Identities=20%  Similarity=0.221  Sum_probs=103.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..|+.||+.||+|||+   ++||||||||+||||+.++.                        |+.|||||++.+..|+.
T Consensus       250 ~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~  326 (423)
T 4fie_A          250 AAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGP  326 (423)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCc
Confidence            4688999999999999   99999999999999987654                        89999999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||.+....       + +...+.......       ..........+.+|+.+||+.||++
T Consensus       327 ~~DiWSlGvilyeml~G~~PF~~~~~~-------~-~~~~i~~~~~~~-------~~~~~~~s~~~~dli~~~L~~dP~~  391 (423)
T 4fie_A          327 EVDIWSLGIMVIEMVDGEPPYFNEPPL-------K-AMKMIRDNLPPR-------LKNLHKVSPSLKGFLDRLLVRDPAQ  391 (423)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHH-------H-HHHHHHHSCCCC-------CSCTTSSCHHHHHHHHHHSCSSTTT
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCcCHH-------H-HHHHHHcCCCCC-------CcccccCCHHHHHHHHHHcCCChhH
Confidence            999999999999999999999754321       1 122222211111       1111223467889999999999999


Q ss_pred             CCCCCccchhhhhhc
Q 022858          138 MPSMTVRPAKFMLHG  152 (291)
Q Consensus       138 RPs~~~v~~~~~L~~  152 (291)
                      |||+.|++...++.+
T Consensus       392 R~ta~ell~Hp~~~~  406 (423)
T 4fie_A          392 RATAAELLKHPFLAK  406 (423)
T ss_dssp             SCCHHHHTTCGGGGG
T ss_pred             CcCHHHHhcCHHhcC
Confidence            999999943345543

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.95  E-value=1.6e-29  Score=217.42  Aligned_cols=120  Identities=24%  Similarity=0.213  Sum_probs=96.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..|+.||+.||+|||+   ++||||||||+|||++.++.                        |+.|||||++.+..|+.
T Consensus       129 ~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~  205 (304)
T 3ubd_A          129 KFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ  205 (304)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCT
T ss_pred             HHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCC
Confidence            4688999999999999   99999999999999987654                        89999999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||+||++|||+||+.||......        .+...+..+..          ..+...+..+.+++.+||+.||++
T Consensus       206 ~~DiwSlGvilyemltG~~PF~~~~~~--------~~~~~i~~~~~----------~~p~~~s~~~~~li~~~L~~dP~~  267 (304)
T 3ubd_A          206 SADWWSFGVLMFEMLTGTLPFQGKDRK--------ETMTMILKAKL----------GMPQFLSPEAQSLLRMLFKRNPAN  267 (304)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC----------CCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             CCcccchHHHHHHHHhCCCCCCCcCHH--------HHHHHHHcCCC----------CCCCcCCHHHHHHHHHHcccCHHH
Confidence            999999999999999999999755421        12222222211          111223457789999999999999


Q ss_pred             CCCCC
Q 022858          138 MPSMT  142 (291)
Q Consensus       138 RPs~~  142 (291)
                      |||+.
T Consensus       268 R~ta~  272 (304)
T 3ubd_A          268 RLGAG  272 (304)
T ss_dssp             STTCS
T ss_pred             CCCCC
Confidence            99974

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.94  E-value=7.5e-29  Score=213.62  Aligned_cols=121  Identities=24%  Similarity=0.277  Sum_probs=92.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------------------CCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------------------TPGYA   45 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------------------t~~y~   45 (291)
                      +.|+.||+.||+|||+   ++||||||||+|||++.++.                                    |+.||
T Consensus       121 ~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Ym  197 (299)
T 4g31_A          121 LHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYM  197 (299)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTS
T ss_pred             HHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCcccc
Confidence            4688999999999999   99999999999999986542                                    78899


Q ss_pred             cCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHH
Q 022858           46 APETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMAL  125 (291)
Q Consensus        46 aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (291)
                      |||++.+..|+.++|||||||++|||++   ||......       ..............         ........+.+
T Consensus       198 APE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~-------~~~~~~~~~~~~p~---------~~~~~~~~~~~  258 (299)
T 4g31_A          198 SPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER-------VRTLTDVRNLKFPP---------LFTQKYPCEYV  258 (299)
T ss_dssp             CHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH-------HHHHHHHHTTCCCH---------HHHHHCHHHHH
T ss_pred             CHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH-------HHHHHHHhcCCCCC---------CCcccCHHHHH
Confidence            9999999999999999999999999996   65432110       01111122222221         12233345678


Q ss_pred             HHHHccccCCCCCCCCCcc
Q 022858          126 VALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v  144 (291)
                      ++.+||+.||++|||+.|+
T Consensus       259 li~~~L~~dP~~Rps~~ei  277 (299)
T 4g31_A          259 MVQDMLSPSPMERPEAINI  277 (299)
T ss_dssp             HHHHHTCSSGGGSCCHHHH
T ss_pred             HHHHHcCCChhHCcCHHHH
Confidence            9999999999999999998

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.94  E-value=3.1e-28  Score=212.03  Aligned_cols=149  Identities=31%  Similarity=0.412  Sum_probs=125.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||++.+..+
T Consensus       142 ~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  218 (321)
T 2qkw_B          142 LEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRL  218 (321)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBC
T ss_pred             HHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCC
Confidence            5789999999999999   99999999999999986643                          667999999988899


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||||+++|||++|+.||....+. .......|.......+.+...+++..........+..+.+++.+||+.||
T Consensus       219 ~~~~Di~slG~il~ell~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP  297 (321)
T 2qkw_B          219 TEKSDVYSFGVVLFEVLCARSAIVQSLPR-EMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSS  297 (321)
T ss_dssp             CTHHHHHHHHHHHHHHHHCCTTCSCSSSS-SCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSG
T ss_pred             CcccchHhHHHHHHHHHhCCCcccccCcH-HHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCc
Confidence            99999999999999999999999866544 33445556555566666666666666666678889999999999999999


Q ss_pred             CCCCCCCccchhhhhhccccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ++||++.++  ++.|+.....
T Consensus       298 ~~Rps~~el--l~~L~~~l~~  316 (321)
T 2qkw_B          298 EDRPSMGDV--LWKLEYALRL  316 (321)
T ss_dssp             GGSCCHHHH--HHHHHHHHHS
T ss_pred             ccCcCHHHH--HHHHHHHhhc
Confidence            999999999  9999887654

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.94  E-value=6.8e-28  Score=210.13  Aligned_cols=152  Identities=32%  Similarity=0.424  Sum_probs=124.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.|+.|++.||+|||+.+..+|+||||||+|||++.++.                         |+.|+|||.+.+..++
T Consensus       134 ~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  213 (326)
T 3uim_A          134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS  213 (326)
T ss_dssp             HHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEEC
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCC
Confidence            578999999999999933339999999999999987643                         7789999999888899


Q ss_pred             cccceechhHHHHHHhhCCCccccccccC-CCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARS-GFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++|||++|+.||....... .......|+.............+...........+..+.+++.+||+.||
T Consensus       214 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP  293 (326)
T 3uim_A          214 EKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSP  293 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCG
T ss_pred             ccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCC
Confidence            99999999999999999999997544322 23345566655555666666666666666778888999999999999999


Q ss_pred             CCCCCCCccchhhhhhcccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~  155 (291)
                      .+|||+.++  ++.|++...
T Consensus       294 ~~Rps~~el--l~~L~~~~~  311 (326)
T 3uim_A          294 MERPKMSEV--VRMLEGDGL  311 (326)
T ss_dssp             GGSCCHHHH--HHHHHTSSC
T ss_pred             ccCCCHHHH--HHHhcCcch
Confidence            999999999  999987543

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.93  E-value=9.2e-28  Score=209.69  Aligned_cols=134  Identities=17%  Similarity=0.192  Sum_probs=106.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                          |+.|+|||++.+..+
T Consensus       120 ~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  196 (327)
T 3poz_A          120 LNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY  196 (327)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCC
Confidence            5789999999999999   99999999999999987542                          558999999999999


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |+.||......        .+...+..+.         ....+..+...+.+++.+||+.|
T Consensus       197 ~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~  259 (327)
T 3poz_A          197 THQSDVWSYGVTVWELMTFGSKPYDGIPAS--------EISSILEKGE---------RLPQPPICTIDVYMIMVKCWMID  259 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------GHHHHHHTTC---------CCCCCTTBCHHHHHHHHHHTCSC
T ss_pred             CchhhhhhhHHHHHHHHhcCCCCccCCCHH--------HHHHHHHcCC---------CCCCCccCCHHHHHHHHHHcCCC
Confidence            999999999999999999 99998754432        1112222211         11222334567889999999999


Q ss_pred             CCCCCCCCccchhhhhhcccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      |++||++.++  ++.|+.....+
T Consensus       260 p~~Rps~~el--l~~l~~~~~~~  280 (327)
T 3poz_A          260 ADSRPKFREL--IIEFSKMARDP  280 (327)
T ss_dssp             GGGSCCHHHH--HHHHHHHHTSH
T ss_pred             hhhCCCHHHH--HHHHHHHHhhh
Confidence            9999999999  99998876543

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.93  E-value=5.1e-27  Score=207.33  Aligned_cols=78  Identities=24%  Similarity=0.393  Sum_probs=69.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC------------------------------------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------------------------   39 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~------------------------------------------   39 (291)
                      ..++.|++.||+|||+   ++||||||||+|||++.+.                                          
T Consensus       120 ~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (361)
T 4f9c_A          120 REYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSIC  196 (361)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC-----------------
T ss_pred             HHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccccccccccccccccccccccc
Confidence            3688999999999999   9999999999999997542                                          


Q ss_pred             -----------CCCccccCccccCC-CCccccceechhHHHHHHhhCCCcccccc
Q 022858           40 -----------WTPGYAAPETWMSF-PVTHKCDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        40 -----------~t~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                                 +|+.|||||++.+. .++.++||||+||++|||++|+.||....
T Consensus       197 ~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~  251 (361)
T 4f9c_A          197 LSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS  251 (361)
T ss_dssp             ---------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred             ccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence                       27789999999875 58999999999999999999999996443

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.93  E-value=9.6e-27  Score=207.87  Aligned_cols=145  Identities=20%  Similarity=0.233  Sum_probs=100.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMSF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~~   53 (291)
                      ..|+.||+.||+|||+   ++||||||||+|||++.++.                            |+.|||||++.+.
T Consensus       161 ~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~  237 (398)
T 4b99_A          161 RYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL  237 (398)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCC
Confidence            4689999999999999   99999999999999986643                            8899999998875


Q ss_pred             -CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC-----------ccchhhhh-cccccc-----
Q 022858           54 -PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG-----------EFQDLIIV-CGMEKN-----  115 (291)
Q Consensus        54 -~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-~~~~~~-----  115 (291)
                       .++.++||||+||++|||++|+.||.+....    .....+.......           .....+.. ....+.     
T Consensus       238 ~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~----~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (398)
T 4b99_A          238 HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV----HQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETV  313 (398)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH----HHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHH
T ss_pred             CCCCChhheehhHHHHHHHHHCCCCCCCCCHH----HHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHh
Confidence             5689999999999999999999999765422    0111111110000           00000000 000000     


Q ss_pred             hHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          116 NKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       116 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      .+.....+.+|+.+||+.||++|||+.|++...++.+.
T Consensus       314 ~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  351 (398)
T 4b99_A          314 YPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY  351 (398)
T ss_dssp             STTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred             CCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence            01123567889999999999999999999444556544

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.93  E-value=3.2e-27  Score=209.78  Aligned_cols=133  Identities=21%  Similarity=0.222  Sum_probs=106.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||++.+..+
T Consensus       206 ~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  282 (370)
T 2psq_A          206 VSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY  282 (370)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCC
Confidence            4688999999999999   99999999999999986643                          457999999999999


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||++ |..||......        .+...+..+..         ...+..+...+.+++.+||+.|
T Consensus       283 ~~~~DvwslG~il~ellt~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~d  345 (370)
T 2psq_A          283 THQSDVWSFGVLMWEIFTLGGSPYPGIPVE--------ELFKLLKEGHR---------MDKPANCTNELYMMMRDCWHAV  345 (370)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------GHHHHHHTTCC---------CCCCTTSCHHHHHHHHHHTCSS
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHhcCCC---------CCCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999999 99998654321        12222222211         1222334567889999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |++||++.|+  ++.|+.+...
T Consensus       346 P~~Rpt~~el--l~~L~~il~~  365 (370)
T 2psq_A          346 PSQRPTFKQL--VEDLDRILTL  365 (370)
T ss_dssp             GGGSCCHHHH--HHHHHHHHHH
T ss_pred             hhhCcCHHHH--HHHHHHHHHH
Confidence            9999999999  9999887654

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.92  E-value=1.6e-26  Score=198.87  Aligned_cols=141  Identities=21%  Similarity=0.180  Sum_probs=103.5

Q ss_pred             hhHHHHHHHHHHHHh--------cCCCCCeEeecCCCCcEEEccCCC----------------------------CCccc
Q 022858            2 HIIAIGTAEGIVSLH--------DGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYA   45 (291)
Q Consensus         2 l~i~~~ia~gL~ylH--------~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~   45 (291)
                      ++|+.|++.||+|||        +   ++|+||||||+|||++.++.                            |+.|+
T Consensus       108 ~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~  184 (301)
T 3q4u_A          108 LRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM  184 (301)
T ss_dssp             HHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGC
T ss_pred             HHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccccccccccccccccee
Confidence            578999999999999        6   99999999999999986542                            67899


Q ss_pred             cCccccCC------CCccccceechhHHHHHHhhC----------CCccccccccCCCCchhHHHHHHhhcCccchhhhh
Q 022858           46 APETWMSF------PVTHKCDVRSFGMLLFEILGR----------RRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIV  109 (291)
Q Consensus        46 aPE~~~~~------~~~~~~Dv~s~G~~l~elltg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (291)
                      |||++.+.      .++.++||||||+++|||++|          ..||........   ....................
T Consensus       185 aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  261 (301)
T 3q4u_A          185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP---SFEDMRKVVCVDQQRPNIPN  261 (301)
T ss_dssp             CHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC---CHHHHHHHHTTSCCCCCCCG
T ss_pred             ChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc---chhhhhHHHhccCCCCCCCh
Confidence            99999876      566799999999999999999          777754433211   11212222211111100000


Q ss_pred             cccccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          110 CGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       110 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                         .......+..+.+++.+||+.||++|||+.++  ++.|+++
T Consensus       262 ---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i--~~~L~~i  300 (301)
T 3q4u_A          262 ---RWFSDPTLTSLAKLMKECWYQNPSARLTALRI--KKTLTKI  300 (301)
T ss_dssp             ---GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHH--HHHHHHH
T ss_pred             ---hhccCccHHHHHHHHHHHhhcChhhCCCHHHH--HHHHhcc
Confidence               11223567889999999999999999999999  9988764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.92  E-value=4.2e-27  Score=205.56  Aligned_cols=134  Identities=17%  Similarity=0.182  Sum_probs=106.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||.+.+..+
T Consensus       120 ~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  196 (327)
T 3lzb_A          120 LNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY  196 (327)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCC
Confidence            5789999999999999   99999999999999986532                          457999999999999


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||......        ........+.         ....+......+.+++.+||+.|
T Consensus       197 ~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~d  259 (327)
T 3lzb_A          197 THQSDVWSYGVTVWELMTFGSKPYDGIPAS--------EISSILEKGE---------RLPQPPICTIDVYMIMRKCWMID  259 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------GHHHHHHTTC---------CCCCCTTBCHHHHHHHHHHTCSS
T ss_pred             ChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--------HHHHHHHcCC---------CCCCCccCCHHHHHHHHHHcCCC
Confidence            999999999999999999 99998755432        1112222111         11122234467889999999999


Q ss_pred             CCCCCCCCccchhhhhhcccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      |.+||++.++  ++.|+.....+
T Consensus       260 p~~Rps~~el--l~~L~~~~~~~  280 (327)
T 3lzb_A          260 ADSRPKFREL--IIEFSKMARDP  280 (327)
T ss_dssp             GGGSCCHHHH--HHHHHHHHTSH
T ss_pred             hhHCcCHHHH--HHHHHHHHhCc
Confidence            9999999999  99998887554

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.92  E-value=1.5e-26  Score=204.87  Aligned_cols=143  Identities=13%  Similarity=0.096  Sum_probs=109.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEc--cCC-------------------------------CCCccccCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD--VKF-------------------------------WTPGYAAPE   48 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~--~~~-------------------------------~t~~y~aPE   48 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++  .++                               +|+.|+|||
T Consensus       155 ~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  231 (364)
T 3op5_A          155 LQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSID  231 (364)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHH
T ss_pred             HHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHH
Confidence            5789999999999999   9999999999999998  322                               267899999


Q ss_pred             cccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHH
Q 022858           49 TWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVAL  128 (291)
Q Consensus        49 ~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  128 (291)
                      ++.+..++.++|||||||++|||++|+.||......   .......... ....+.++++++...   ...+..+.+++.
T Consensus       232 ~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~li~  304 (364)
T 3op5_A          232 AHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD---PKYVRDSKIR-YRENIASLMDKCFPA---ANAPGEIAKYME  304 (364)
T ss_dssp             HHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC---HHHHHHHHHH-HHHCHHHHHHHHSCT---TCCCHHHHHHHH
T ss_pred             HhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC---HHHHHHHHHH-hhhhHHHHHHHhccc---ccCHHHHHHHHH
Confidence            999989999999999999999999999999864322   1111111111 112333444443221   122467889999


Q ss_pred             HccccCCCCCCCCCccchhhhhhccccc
Q 022858          129 WRVQYKPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       129 ~cl~~~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      .||+.+|++||++.++  ++.|+.....
T Consensus       305 ~cl~~~p~~RP~~~~l--~~~l~~~~~~  330 (364)
T 3op5_A          305 TVKLLDYTEKPLYENL--RDILLQGLKA  330 (364)
T ss_dssp             HHHTCCTTCCCCHHHH--HHHHHHHHHH
T ss_pred             HHhcCCCCCCCCHHHH--HHHHHHHHHH
Confidence            9999999999999999  9988887654

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.92  E-value=6.4e-27  Score=204.15  Aligned_cols=134  Identities=19%  Similarity=0.149  Sum_probs=105.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||++.+..+
T Consensus       118 ~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  194 (325)
T 3kex_A          118 LNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY  194 (325)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCC
Confidence            5788999999999999   99999999999999986543                          558999999998899


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||......        .+...+..+..         ...+..+...+.+++.+||+.|
T Consensus       195 ~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~d  257 (325)
T 3kex_A          195 THQSDVWSYGVTVWELMTFGAEPYAGLRLA--------EVPDLLEKGER---------LAQPQICTIDVYMVMVKCWMID  257 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--------HHHHHHHTTCB---------CCCCTTBCTTTTHHHHHHTCSC
T ss_pred             ChhhHhHHhHHHHHHHHhCCCCCccccCHH--------HHHHHHHcCCC---------CCCCCcCcHHHHHHHHHHcCCC
Confidence            999999999999999999 99999754322        11122222111         1111223346788999999999


Q ss_pred             CCCCCCCCccchhhhhhcccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      |.+||++.++  ++.|+.....+
T Consensus       258 p~~Rps~~el--~~~l~~~~~~~  278 (325)
T 3kex_A          258 ENIRPTFKEL--ANEFTRMARDP  278 (325)
T ss_dssp             TTTSCCHHHH--HHHHHHHTTSH
T ss_pred             hhhCcCHHHH--HHHHHHHHhcc
Confidence            9999999999  99998876654

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.92  E-value=1.6e-26  Score=200.08  Aligned_cols=140  Identities=21%  Similarity=0.306  Sum_probs=107.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      +.++.|++.||+|||+.+..+|+||||||+|||++.++.                      ++.|+|||++.+..++.++
T Consensus       105 ~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  184 (307)
T 2eva_A          105 MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKC  184 (307)
T ss_dssp             HHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------CCTTSSCHHHHTCCCCCTHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCCceEChhhhCCCCCCcHH
Confidence            568899999999999865568999999999999976542                      7889999999998999999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      ||||||+++|||++|+.||......     ... .......+..         .......+..+.+++.+||+.||++||
T Consensus       185 Di~slG~il~el~~g~~p~~~~~~~-----~~~-~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rp  249 (307)
T 2eva_A          185 DVFSWGIILWEVITRRKPFDEIGGP-----AFR-IMWAVHNGTR---------PPLIKNLPKPIESLMTRCWSKDPSQRP  249 (307)
T ss_dssp             HHHHHHHHHHHHHHTCCTTTTTCSS-----HHH-HHHHHHTTCC---------CCCBTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHHHHHHHHHHHCCCCchhhCcc-----HHH-HHHHHhcCCC---------CCcccccCHHHHHHHHHHhcCChhhCc
Confidence            9999999999999999998644321     111 1111111111         111223346788999999999999999


Q ss_pred             CCCccchhhhhhccccccc
Q 022858          140 SMTVRPAKFMLHGSLASML  158 (291)
Q Consensus       140 s~~~v~~~~~L~~~~~~~~  158 (291)
                      |+.++  ++.|+.+.....
T Consensus       250 s~~el--l~~L~~~~~~~~  266 (307)
T 2eva_A          250 SMEEI--VKIMTHLMRYFP  266 (307)
T ss_dssp             CHHHH--HHHHHHHGGGCC
T ss_pred             CHHHH--HHHHHHHHHhcc
Confidence            99999  999988765543

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.92  E-value=5.3e-27  Score=204.75  Aligned_cols=135  Identities=20%  Similarity=0.202  Sum_probs=107.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                           |+.|+|||++.+..
T Consensus       154 ~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  230 (325)
T 3kul_A          154 VGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT  230 (325)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCC
Confidence            5789999999999999   99999999999999987643                           44699999999889


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++||||||+++|||++ |..||......        .+...+..+         ...+.+..++..+.+++.+||+.
T Consensus       231 ~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~  293 (325)
T 3kul_A          231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNR--------DVISSVEEG---------YRLPAPMGCPHALHQLMLDCWHK  293 (325)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--------HHHHHHHTT---------CCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             CCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHHcC---------CCCCCCCCcCHHHHHHHHHHccC
Confidence            9999999999999999998 99998654321        122222221         11122234456788999999999


Q ss_pred             CCCCCCCCCccchhhhhhccccccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSLASML  158 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~~~~~  158 (291)
                      ||++||++.++  ++.|+.+...+.
T Consensus       294 dp~~Rps~~ei--l~~L~~l~~~~~  316 (325)
T 3kul_A          294 DRAQRPRFSQI--VSVLDALIRSPE  316 (325)
T ss_dssp             SGGGSCCHHHH--HHHHHHHHHSCC
T ss_pred             ChhhCcCHHHH--HHHHHHHHhCcc
Confidence            99999999999  999998876543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.92  E-value=6.2e-27  Score=207.72  Aligned_cols=135  Identities=22%  Similarity=0.185  Sum_probs=106.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------CCccccCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------TPGYAAPETWMS   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------t~~y~aPE~~~~   52 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.++.                             |+.|+|||++.+
T Consensus       184 ~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  260 (367)
T 3l9p_A          184 LHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFME  260 (367)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcC
Confidence            4689999999999999   99999999999999984331                             567999999998


Q ss_pred             CCCccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcc
Q 022858           53 FPVTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRV  131 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  131 (291)
                      ..++.++|||||||++|||++ |..||......        .+...+..+..         ...+..++..+.+++.+||
T Consensus       261 ~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--------~~~~~i~~~~~---------~~~~~~~~~~l~~li~~~l  323 (367)
T 3l9p_A          261 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--------EVLEFVTSGGR---------MDPPKNCPGPVYRIMTQCW  323 (367)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHHHHHHTTCC---------CCCCTTCCHHHHHHHHHHT
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCC---------CCCCccCCHHHHHHHHHHc
Confidence            899999999999999999998 99998654321        12222222111         1112234467889999999


Q ss_pred             ccCCCCCCCCCccchhhhhhccccccc
Q 022858          132 QYKPEAMPSMTVRPAKFMLHGSLASML  158 (291)
Q Consensus       132 ~~~p~~RPs~~~v~~~~~L~~~~~~~~  158 (291)
                      +.||.+||++.++  ++.|+.....+.
T Consensus       324 ~~dP~~Rps~~ei--l~~l~~~~~~~~  348 (367)
T 3l9p_A          324 QHQPEDRPNFAII--LERIEYCTQDPD  348 (367)
T ss_dssp             CSSGGGSCCHHHH--HHHHHHHHHCHH
T ss_pred             CCCHhHCcCHHHH--HHHHHHHhhChh
Confidence            9999999999999  999988766543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.92  E-value=9.4e-27  Score=201.81  Aligned_cols=134  Identities=26%  Similarity=0.293  Sum_probs=105.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCC--eEeecCCCCcEEEccCCC------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQ--IIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~--ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||+|||+   .+  |+||||||+|||++.++.                        |+.|+|||.+.+..+
T Consensus       140 ~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  216 (309)
T 3p86_A          140 LSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPS  216 (309)
T ss_dssp             HHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC-----------------CCTTSCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCC
Confidence            5689999999999999   78  999999999999987643                        788999999999999


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||||+++|||++|+.||......       +.........         .....+......+.+++.+||+.||
T Consensus       217 ~~~~DiwslG~il~elltg~~Pf~~~~~~-------~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dP  280 (309)
T 3p86_A          217 NEKSDVYSFGVILWELATLQQPWGNLNPA-------QVVAAVGFKC---------KRLEIPRNLNPQVAAIIEGCWTNEP  280 (309)
T ss_dssp             CTTHHHHHHHHHHHHHHHCCCTTTTSCHH-------HHHHHHHHSC---------CCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhcC---------CCCCCCccCCHHHHHHHHHHccCCh
Confidence            99999999999999999999999654321       1111111011         0111122334678899999999999


Q ss_pred             CCCCCCCccchhhhhhccccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ++||++.++  ++.|+.....
T Consensus       281 ~~Rps~~~l--l~~L~~~~~~  299 (309)
T 3p86_A          281 WKRPSFATI--MDLLRPLIKS  299 (309)
T ss_dssp             GGSCCHHHH--HHHHHHHHC-
T ss_pred             hhCcCHHHH--HHHHHHHHHh
Confidence            999999999  9999887654

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.92  E-value=1.8e-26  Score=201.09  Aligned_cols=147  Identities=18%  Similarity=0.135  Sum_probs=106.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCC----------CeEeecCCCCcEEEccCCC--------------------------CCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQ----------QIIHYNIKPENILLDVKFW--------------------------TPGYA   45 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~----------~ivH~Dlkp~NIll~~~~~--------------------------t~~y~   45 (291)
                      +.|+.|++.||+|||+   .          +|+||||||+|||++.++.                          |+.|+
T Consensus       124 ~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~  200 (322)
T 3soc_A          124 CHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM  200 (322)
T ss_dssp             HHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGC
T ss_pred             HHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCcccc
Confidence            5789999999999999   7          9999999999999986642                          77899


Q ss_pred             cCccccC-----CCCccccceechhHHHHHHhhCCCccccccccCCCCc--------hhHHHHHHhhcCccchhhhhccc
Q 022858           46 APETWMS-----FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPS--------GFKWVWKKLEKGEFQDLIIVCGM  112 (291)
Q Consensus        46 aPE~~~~-----~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~  112 (291)
                      |||++.+     ..++.++|||||||++|||++|+.||...........        .................+..   
T Consensus       201 aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  277 (322)
T 3soc_A          201 APEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRD---  277 (322)
T ss_dssp             CHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCG---
T ss_pred             CHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccc---
Confidence            9999886     3567789999999999999999999976543321110        01111111111111100000   


Q ss_pred             ccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhccccc
Q 022858          113 EKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       113 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ......++..+.+++.+||+.||++|||+.++  ++.|+.+.+.
T Consensus       278 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el--l~~L~~l~~~  319 (322)
T 3soc_A          278 YWQKHAGMAMLCETIEECWDHDAEARLSAGCV--GERITQMQRL  319 (322)
T ss_dssp             GGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHH--HHHHHHHHHH
T ss_pred             cccccchHHHHHHHHHHHccCChhhCcCHHHH--HHHHHHHHHH
Confidence            01123456779999999999999999999999  9999887643

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.92  E-value=9.3e-27  Score=207.01  Aligned_cols=134  Identities=19%  Similarity=0.206  Sum_probs=105.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.++.                           ++.|+|||++.+..
T Consensus       150 ~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  226 (373)
T 2qol_A          150 VGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK  226 (373)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCC
Confidence            5789999999999999   99999999999999987653                           34699999999889


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++||||||+++||+++ |+.||......        .+...+..+         ...+.+..++..+.+++.+||+.
T Consensus       227 ~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--------~~~~~i~~~---------~~~~~~~~~~~~l~~li~~cl~~  289 (373)
T 2qol_A          227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--------DVIKAVDEG---------YRLPPPMDCPAALYQLMLDCWQK  289 (373)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--------HHHHHHHTT---------EECCCCTTCBHHHHHHHHHHTCS
T ss_pred             cCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcC---------CCCCCCccccHHHHHHHHHHhCc
Confidence            9999999999999999997 99998654321        112222211         11122234457789999999999


Q ss_pred             CCCCCCCCCccchhhhhhcccccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      ||++||++.++  ++.|+.....+
T Consensus       290 dp~~RPs~~~i--~~~L~~~~~~~  311 (373)
T 2qol_A          290 DRNNRPKFEQI--VSILDKLIRNP  311 (373)
T ss_dssp             SGGGSCCHHHH--HHHHHHHHHCG
T ss_pred             ChhhCcCHHHH--HHHHHHHHhCc
Confidence            99999999999  99998886654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.92  E-value=5.9e-27  Score=208.58  Aligned_cols=132  Identities=20%  Similarity=0.175  Sum_probs=105.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.||+.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||.+.+..+
T Consensus       216 ~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  292 (377)
T 3cbl_A          216 LQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRY  292 (377)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCC
Confidence            5789999999999999   99999999999999987653                          345999999998899


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||++ |..||......        .+...+..+.         ..+.+..++..+.+++.+||+.|
T Consensus       293 ~~~~DvwslG~il~el~t~g~~p~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~l~~li~~cl~~d  355 (377)
T 3cbl_A          293 SSESDVWSFGILLWETFSLGASPYPNLSNQ--------QTREFVEKGG---------RLPCPELCPDAVFRLMEQCWAYE  355 (377)
T ss_dssp             EHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--------HHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCC---------CCCCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999998 99998654321        1222222221         11222334567889999999999


Q ss_pred             CCCCCCCCccchhhhhhcccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      |++|||+.++  ++.|+.+..
T Consensus       356 P~~Rps~~~i--~~~L~~i~~  374 (377)
T 3cbl_A          356 PGQRPSFSTI--YQELQSIRK  374 (377)
T ss_dssp             GGGSCCHHHH--HHHHHHHHH
T ss_pred             chhCcCHHHH--HHHHHHHHh
Confidence            9999999999  999987654

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.92  E-value=1.1e-25  Score=194.44  Aligned_cols=142  Identities=30%  Similarity=0.394  Sum_probs=109.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||+|||+   .+|+||||||+||+++.++.                          ++.|+|||.+.+ .+
T Consensus       136 ~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~  211 (307)
T 2nru_A          136 CKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EI  211 (307)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EE
T ss_pred             HHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CC
Confidence            5689999999999999   99999999999999986642                          678999998765 58


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc--CccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK--GEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      +.++||||||+++|||++|..||.........   .. +......  ..+.+.+++ ............+.+++.+||+.
T Consensus       212 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~  286 (307)
T 2nru_A          212 TPKSDIYSFGVVLLEIITGLPAVDEHREPQLL---LD-IKEEIEDEEKTIEDYIDK-KMNDADSTSVEAMYSVASQCLHE  286 (307)
T ss_dssp             CTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT---TH-HHHHHHTTSCCHHHHSCS-SCSCCCHHHHHHHHHHHHHHTCS
T ss_pred             CccchhHHHHHHHHHHHHCCCCcccCcchHHH---HH-HHHHhhhhhhhhhhhccc-cccccchHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999766543211   11 1111111  112222222 22345567788999999999999


Q ss_pred             CCCCCCCCCccchhhhhhccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~  154 (291)
                      ||.+||++.++  ++.|+++.
T Consensus       287 ~p~~Rps~~~l--~~~L~~l~  305 (307)
T 2nru_A          287 KKNKRPDIKKV--QQLLQEMT  305 (307)
T ss_dssp             STTTSCCHHHH--HHHHHHHC
T ss_pred             CcccCcCHHHH--HHHHHHHh
Confidence            99999999999  99998764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.92  E-value=1.4e-26  Score=210.98  Aligned_cols=133  Identities=24%  Similarity=0.294  Sum_probs=106.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      ++|+.||+.||+|||+   .+|+||||||+|||++.++.                         ++.|+|||.+....++
T Consensus       287 ~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  363 (454)
T 1qcf_A          287 IDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT  363 (454)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCC
Confidence            5689999999999999   99999999999999997643                         4579999999988999


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++|||||||++|||++ |+.||......        .+...+..+.         ..+.+..++..+.+++.+||+.||
T Consensus       364 ~~~DvwslG~~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~---------~~~~~~~~~~~l~~li~~cl~~dp  426 (454)
T 1qcf_A          364 IKSDVWSFGILLMEIVTYGRIPYPGMSNP--------EVIRALERGY---------RMPRPENCPEELYNIMMRCWKNRP  426 (454)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHHHHHHHTC---------CCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             cHHHHHhHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCC---------CCCCCCCCCHHHHHHHHHHccCCh
Confidence            99999999999999999 99998654321        1222222211         112223455788999999999999


Q ss_pred             CCCCCCCccchhhhhhccccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ++|||+.+|  +..|+.....
T Consensus       427 ~~RPt~~~i--~~~L~~~~~~  445 (454)
T 1qcf_A          427 EERPTFEYI--QSVLDDFYTA  445 (454)
T ss_dssp             GGSCCHHHH--HHHHHTSSSS
T ss_pred             hHCcCHHHH--HHHHHHHHhc
Confidence            999999999  9999887653

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.92  E-value=3.4e-26  Score=196.35  Aligned_cols=140  Identities=17%  Similarity=0.186  Sum_probs=105.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEE---ccCCC-------------------------------CCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILL---DVKFW-------------------------------TPGYAAP   47 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll---~~~~~-------------------------------t~~y~aP   47 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||+   +.++.                               ++.|+||
T Consensus       108 ~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  184 (296)
T 4hgt_A          108 LLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI  184 (296)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCH
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccch
Confidence            5789999999999999   999999999999999   43321                               6789999


Q ss_pred             ccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHH
Q 022858           48 ETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVA  127 (291)
Q Consensus        48 E~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  127 (291)
                      |.+.+..++.++|||||||++|||++|+.||.......... ....+.........         .......+..+.+++
T Consensus       185 E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~l~~li  254 (296)
T 4hgt_A          185 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ-KYERISEKKMSTPI---------EVLCKGYPSEFATYL  254 (296)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS-HHHHHHHHHHHSCH---------HHHTTTSCHHHHHHH
T ss_pred             HHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh-hhhhhhcccccchh---------hhhhccCCHHHHHHH
Confidence            99999899999999999999999999999997655432221 11111111110000         000011246788999


Q ss_pred             HHccccCCCCCCCCCccchhhhhhccccc
Q 022858          128 LWRVQYKPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       128 ~~cl~~~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ..||+.||++||++.++  ++.|+.....
T Consensus       255 ~~~l~~~p~~Rpt~~~l--~~~l~~~~~~  281 (296)
T 4hgt_A          255 NFCRSLRFDDKPDYSYL--RQLFRNLFHR  281 (296)
T ss_dssp             HHHHTSCTTCCCCHHHH--HHHHHHHHHH
T ss_pred             HHHHhcCCCCCCCHHHH--HHHHHHHHHH
Confidence            99999999999999999  9998887654

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.92  E-value=1.5e-26  Score=201.34  Aligned_cols=135  Identities=20%  Similarity=0.217  Sum_probs=106.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||.+.+..+
T Consensus       140 ~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  216 (323)
T 3qup_A          140 VRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLY  216 (323)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCC
Confidence            5789999999999999   99999999999999987643                          457999999998899


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||......        ........+.         ....+...+..+.+++.+||+.|
T Consensus       217 ~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~d  279 (323)
T 3qup_A          217 TVHSDVWAFGVTMWEIMTRGQTPYAGIENA--------EIYNYLIGGN---------RLKQPPECMEEVYDLMYQCWSAD  279 (323)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------GHHHHHHTTC---------CCCCCTTCCHHHHHHHHHTTCSS
T ss_pred             CCccchhhHHHHHHHHHhCCCCCccccChH--------HHHHHHhcCC---------CCCCCCccCHHHHHHHHHHccCC
Confidence            999999999999999999 89998754432        1112221111         11122234467889999999999


Q ss_pred             CCCCCCCCccchhhhhhccccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLASML  158 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~~~  158 (291)
                      |++||++.++  ++.|+++...+.
T Consensus       280 p~~Rps~~~l--~~~l~~~l~~~~  301 (323)
T 3qup_A          280 PKQRPSFTCL--RMELENILGHLS  301 (323)
T ss_dssp             GGGSCCHHHH--HHHHHHHHHC--
T ss_pred             hhhCcCHHHH--HHHHHHHHHHhh
Confidence            9999999999  999998876543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.92  E-value=2.6e-26  Score=209.03  Aligned_cols=132  Identities=20%  Similarity=0.197  Sum_probs=106.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCccccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      +.++.||+.||+|||+   .+|+||||||+|||++.++.                     ++.|+|||.+.+..++.++|
T Consensus       292 ~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sD  368 (450)
T 1k9a_A          292 LKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD  368 (450)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCTTTSCHHHHHSSCCCHHHH
T ss_pred             HHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCCCcHHH
Confidence            5789999999999999   99999999999999987643                     67899999999999999999


Q ss_pred             eechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           61 VRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        61 v~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      |||||+++|||++ |..||......        .+...+..+.         ....+..++..+.+++.+||+.||.+||
T Consensus       369 vwslG~~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~---------~~~~p~~~~~~l~~li~~cl~~dp~~Rp  431 (450)
T 1k9a_A          369 VWSFGILLWEIYSFGRVPYPRIPLK--------DVVPRVEKGY---------KMDAPDGCPPAVYDVMKNCWHLDAATRP  431 (450)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTSCTT--------THHHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCC---------CCCCCCcCCHHHHHHHHHHcCCChhHCc
Confidence            9999999999998 99998755432        1222222221         1122234557889999999999999999


Q ss_pred             CCCccchhhhhhcccc
Q 022858          140 SMTVRPAKFMLHGSLA  155 (291)
Q Consensus       140 s~~~v~~~~~L~~~~~  155 (291)
                      ++.++  +..|+.+..
T Consensus       432 t~~~l--~~~L~~i~~  445 (450)
T 1k9a_A          432 TFLQL--REQLEHIRT  445 (450)
T ss_dssp             CHHHH--HHHHHHHHH
T ss_pred             CHHHH--HHHHHHHHH
Confidence            99999  999887654

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.92  E-value=1.1e-26  Score=206.42  Aligned_cols=140  Identities=9%  Similarity=-0.020  Sum_probs=102.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccC--CCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMS--FPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~--~~~~~~   58 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.++.                     |+.|+|||++.+  ..++.+
T Consensus       197 ~~i~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~  273 (371)
T 3q60_A          197 HILTAQLIRLAANLQS---KGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHA  273 (371)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHH
T ss_pred             HHHHHHHHHHHHHHHH---CCCccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCcc
Confidence            4567999999999999   99999999999999997754                     789999999987  679999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|||||||++|||++|+.||..........         +...............+........+.+++.+||+.||++|
T Consensus       274 ~DiwSlG~il~elltg~~Pf~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  344 (371)
T 3q60_A          274 LNAWQLGLSIYRVWCLFLPFGLVTPGIKGS---------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRR  344 (371)
T ss_dssp             HHHHHHHHHHHHHHHSSCSTTBCCTTCTTC---------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTC
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCcCcccccc---------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhC
Confidence            999999999999999999998764321100         00000000000001111112335678899999999999999


Q ss_pred             CCCCccchhhhhhcc
Q 022858          139 PSMTVRPAKFMLHGS  153 (291)
Q Consensus       139 Ps~~~v~~~~~L~~~  153 (291)
                      |++.++.....+.+.
T Consensus       345 pt~~e~l~hp~f~~~  359 (371)
T 3q60_A          345 LLPLEAMETPEFLQL  359 (371)
T ss_dssp             CCHHHHTTSHHHHHH
T ss_pred             CCHHHHhcCHHHHHH
Confidence            999999444445444

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.92  E-value=4.7e-26  Score=195.72  Aligned_cols=140  Identities=15%  Similarity=0.166  Sum_probs=105.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC------------------------------------CCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------------------WTPGYA   45 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~------------------------------------~t~~y~   45 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++                                    +|+.|+
T Consensus       109 ~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  185 (298)
T 1csn_A          109 AMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYM  185 (298)
T ss_dssp             HHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTC
T ss_pred             HHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccC
Confidence            5789999999999999   9999999999999996542                                    157799


Q ss_pred             cCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHH
Q 022858           46 APETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMAL  125 (291)
Q Consensus        46 aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (291)
                      |||.+.+..++.++||||||+++|||++|+.||.......     .......+.....     ...........+..+.+
T Consensus       186 aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-----~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~  255 (298)
T 1csn_A          186 SINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT-----NKQKYERIGEKKQ-----STPLRELCAGFPEEFYK  255 (298)
T ss_dssp             CHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC-----HHHHHHHHHHHHH-----HSCHHHHTTTSCHHHHH
T ss_pred             CchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccc-----cHHHHHHHHhhcc-----CccHHHHHhhCcHHHHH
Confidence            9999999899999999999999999999999997654221     1111111111000     00000011123467889


Q ss_pred             HHHHccccCCCCCCCCCccchhhhhhccccc
Q 022858          126 VALWRVQYKPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ++.+||+.||++||++.++  ++.|++....
T Consensus       256 li~~~l~~dp~~RP~~~~l--~~~l~~~~~~  284 (298)
T 1csn_A          256 YMHYARNLAFDATPDYDYL--QGLFSKVLER  284 (298)
T ss_dssp             HHHHHHHCCTTCCCCHHHH--HHHHHHHHHH
T ss_pred             HHHHHhcCCcccCCCHHHH--HHHHHHHHHh
Confidence            9999999999999999999  9999887654

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.92  E-value=5.1e-26  Score=195.36  Aligned_cols=140  Identities=16%  Similarity=0.181  Sum_probs=105.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEc---cCCC-------------------------------CCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD---VKFW-------------------------------TPGYAAP   47 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~---~~~~-------------------------------t~~y~aP   47 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++   .++.                               ++.|+||
T Consensus       108 ~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  184 (296)
T 3uzp_A          108 LLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI  184 (296)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCH
T ss_pred             HHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCCh
Confidence            5789999999999999   9999999999999994   3221                               6679999


Q ss_pred             ccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHH
Q 022858           48 ETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVA  127 (291)
Q Consensus        48 E~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  127 (291)
                      |.+.+..++.++||||||+++|||++|+.||.......... ....+..........         ......+..+.+++
T Consensus       185 E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~l~~li  254 (296)
T 3uzp_A          185 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ-KYERISEKKMSTPIE---------VLCKGYPSEFATYL  254 (296)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS-HHHHHHHHHHHSCHH---------HHTTTSCHHHHHHH
T ss_pred             hhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhh-hhhhhcccccCCchH---------HHHhhCCHHHHHHH
Confidence            99999899999999999999999999999998654332221 111111111100000         00112346788999


Q ss_pred             HHccccCCCCCCCCCccchhhhhhccccc
Q 022858          128 LWRVQYKPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       128 ~~cl~~~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      .+||+.||++||++.++  ++.|+.....
T Consensus       255 ~~~l~~dp~~Rps~~~l--~~~l~~~~~~  281 (296)
T 3uzp_A          255 NFCRSLRFDDKPDYSYL--RQLFRNLFHR  281 (296)
T ss_dssp             HHHHTSCTTCCCCHHHH--HHHHHHHHHH
T ss_pred             HHHHhcCcCcCCCHHHH--HHHHHHHHHh
Confidence            99999999999999999  9999887654

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.92  E-value=2.3e-26  Score=199.10  Aligned_cols=136  Identities=24%  Similarity=0.226  Sum_probs=105.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------------------CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------------------TPG   43 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------------------t~~   43 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                                      |+.
T Consensus       111 ~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  187 (310)
T 3s95_A          111 VSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY  187 (310)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGG
T ss_pred             HHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcc
Confidence            5789999999999999   99999999999999986642                                      456


Q ss_pred             cccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHH
Q 022858           44 YAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERM  123 (291)
Q Consensus        44 y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (291)
                      |+|||++.+..++.++||||||+++|||++|..|+.............  ..         ...+.    ..+..++..+
T Consensus       188 y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~--~~---------~~~~~----~~~~~~~~~l  252 (310)
T 3s95_A          188 WMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN--VR---------GFLDR----YCPPNCPPSF  252 (310)
T ss_dssp             GCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC--HH---------HHHHH----TCCTTCCTTH
T ss_pred             eeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh--hh---------ccccc----cCCCCCCHHH
Confidence            999999999999999999999999999999999986554332211110  00         01111    1112234568


Q ss_pred             HHHHHHccccCCCCCCCCCccchhhhhhcccccc
Q 022858          124 ALVALWRVQYKPEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       124 ~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      .+++.+||+.||++||++.++  ++.|+.+....
T Consensus       253 ~~li~~~l~~dP~~Rps~~~l--~~~L~~l~~~~  284 (310)
T 3s95_A          253 FPITVRCCDLDPEKRPSFVKL--EHWLETLRMHL  284 (310)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHH--HHHHHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHH--HHHHHHHHHhc
Confidence            889999999999999999999  99998886543

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.91  E-value=9.8e-26  Score=210.84  Aligned_cols=132  Identities=18%  Similarity=0.176  Sum_probs=99.6

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccC-CCCcccc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMS-FPVTHKC   59 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~-~~~~~~~   59 (291)
                      .++.||+.||+|||+   ++||||||||+||||+.++.                      |+.|||||++.+ ..|+.++
T Consensus       296 ~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~v  372 (689)
T 3v5w_A          296 FYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA  372 (689)
T ss_dssp             HHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHH
T ss_pred             HHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHH
Confidence            578999999999999   99999999999999997754                      999999999975 5799999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      |+||+||++|||++|..||.......    . ..+.........          ..+......+.+|+.+||+.||.+|+
T Consensus       373 DiWSLGvilYEmLtG~~PF~~~~~~~----~-~~i~~~i~~~~~----------~~p~~~S~~a~dLI~~lL~~dP~~Rl  437 (689)
T 3v5w_A          373 DWFSLGCMLFKLLRGHSPFRQHKTKD----K-HEIDRMTLTMAV----------ELPDSFSPELRSLLEGLLQRDVNRRL  437 (689)
T ss_dssp             HHHHHHHHHHHHHHSSCTTCGGGCCC----H-HHHHHHHHHCCC----------CCCTTSCHHHHHHHHHHTCSCGGGCT
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCChHH----H-HHHHHhhcCCCC----------CCCccCCHHHHHHHHHHccCCHhHCC
Confidence            99999999999999999997654321    1 111222211111          11122346778999999999999999


Q ss_pred             CC-----Cccchhhhhhc
Q 022858          140 SM-----TVRPAKFMLHG  152 (291)
Q Consensus       140 s~-----~~v~~~~~L~~  152 (291)
                      +.     .||.....+.+
T Consensus       438 ~~~~~ga~ei~~HpfF~~  455 (689)
T 3v5w_A          438 GCLGRGAQEVKESPFFRS  455 (689)
T ss_dssp             TCSSSTHHHHTTSGGGTT
T ss_pred             CCCCCCHHHHhcCccccC
Confidence            84     55644444443

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.91  E-value=1.4e-26  Score=204.30  Aligned_cols=133  Identities=25%  Similarity=0.251  Sum_probs=104.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                          |+.|+|||++.+..+
T Consensus       196 ~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  272 (359)
T 3vhe_A          196 ICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY  272 (359)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCC
Confidence            5689999999999999   99999999999999985543                          567999999998899


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||......       .........+..         ...+......+.+++..||+.|
T Consensus       273 ~~~~Di~slG~il~ellt~g~~p~~~~~~~-------~~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~d  336 (359)
T 3vhe_A          273 TIQSDVWSFGVLLWEIFSLGASPYPGVKID-------EEFCRRLKEGTR---------MRAPDYTTPEMYQTMLDCWHGE  336 (359)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-------HHHHHHHHHTCC---------CCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CchhhhhhHHHHHHHHHhcCCCCCCccchh-------HHHHHHHHcCCC---------CCCCCCCCHHHHHHHHHHccCC
Confidence            999999999999999998 99998654322       112222222111         1112223467889999999999


Q ss_pred             CCCCCCCCccchhhhhhcccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      |.+||++.|+  ++.|+.+..
T Consensus       337 P~~Rps~~el--l~~L~~~~~  355 (359)
T 3vhe_A          337 PSQRPTFSEL--VEHLGNLLQ  355 (359)
T ss_dssp             GGGSCCHHHH--HHHHHHHHH
T ss_pred             hhhCCCHHHH--HHHHHHHHH
Confidence            9999999999  999987764

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.91  E-value=1.5e-26  Score=198.77  Aligned_cols=141  Identities=16%  Similarity=0.136  Sum_probs=105.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                           +..|+|||.+.+..
T Consensus       117 ~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  193 (295)
T 3ugc_A          117 LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESK  193 (295)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCC
Confidence            5689999999999999   99999999999999986542                           33599999999889


Q ss_pred             CccccceechhHHHHHHhhCCCcccccccc-----CCCC---chhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHH
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKAR-----SGFP---SGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALV  126 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  126 (291)
                      ++.++||||||+++|||++|..|+......     ....   ........         .+......+.+..++..+.++
T Consensus       194 ~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~l  264 (295)
T 3ugc_A          194 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE---------LLKNNGRLPRPDGCPDEIYMI  264 (295)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH---------HHHTTCCCCCCTTCCHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH---------HHhccCcCCCCcCcCHHHHHH
Confidence            999999999999999999999887544321     0000   00001111         111111222334456788999


Q ss_pred             HHHccccCCCCCCCCCccchhhhhhccccc
Q 022858          127 ALWRVQYKPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       127 ~~~cl~~~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      +.+||+.||++|||+.++  ++.|+.+...
T Consensus       265 i~~~l~~dp~~Rps~~el--~~~L~~l~~~  292 (295)
T 3ugc_A          265 MTECWNNNVNQRPSFRDL--ALRVDQIRDN  292 (295)
T ss_dssp             HHHHSCSSGGGSCCHHHH--HHHHHHHHHC
T ss_pred             HHHHcCCChhhCCCHHHH--HHHHHHHHHh
Confidence            999999999999999999  9999887653

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.91  E-value=3.1e-25  Score=195.04  Aligned_cols=142  Identities=15%  Similarity=0.174  Sum_probs=105.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC--C-------------------------------CCccccCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--W-------------------------------TPGYAAPE   48 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~--~-------------------------------t~~y~aPE   48 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.++  .                               ++.|+|||
T Consensus       154 ~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  230 (345)
T 2v62_A          154 LQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLD  230 (345)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHH
T ss_pred             HHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHH
Confidence            5789999999999999   9999999999999998654  1                               67899999


Q ss_pred             cccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHH
Q 022858           49 TWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVAL  128 (291)
Q Consensus        49 ~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  128 (291)
                      ++.+..++.++|||||||++|||++|+.||......   ............. .+...+.....   ....+..+.+++.
T Consensus       231 ~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~l~~li~  303 (345)
T 2v62_A          231 AHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD---PVAVQTAKTNLLD-ELPQSVLKWAP---SGSSCCEIAQFLV  303 (345)
T ss_dssp             HHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC---HHHHHHHHHHHHH-TTTHHHHHHSC---TTSCCHHHHHHHH
T ss_pred             HhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc---cHHHHHHHHhhcc-cccHHHHhhcc---ccccHHHHHHHHH
Confidence            999989999999999999999999999999653221   0011111111111 11111111000   0123467899999


Q ss_pred             HccccCCCCCCCCCccchhhhhhcccc
Q 022858          129 WRVQYKPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       129 ~cl~~~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      .||+.||++||++.++  ++.|+....
T Consensus       304 ~~l~~dp~~Rps~~~l--~~~L~~~~~  328 (345)
T 2v62_A          304 CAHSLAYDEKPNYQAL--KKILNPHGI  328 (345)
T ss_dssp             HHHTCCTTCCCCHHHH--HHHHCTTCC
T ss_pred             HHhhcCcccCCCHHHH--HHHHhccCC
Confidence            9999999999999999  999987654

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.91  E-value=2e-26  Score=196.74  Aligned_cols=132  Identities=22%  Similarity=0.213  Sum_probs=104.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                         ++.|+|||.+.+..++
T Consensus       119 ~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  195 (281)
T 1mp8_A          119 ILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT  195 (281)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCS
T ss_pred             HHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCC
Confidence            5688999999999999   99999999999999986542                         4579999999888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++|||++ |..||......        .....+..+..         .+.+...+..+.+++.+|++.||
T Consensus       196 ~~~Di~slG~~l~ell~~g~~pf~~~~~~--------~~~~~i~~~~~---------~~~~~~~~~~l~~li~~~l~~~p  258 (281)
T 1mp8_A          196 SASDVWMFGVCMWEILMHGVKPFQGVKNN--------DVIGRIENGER---------LPMPPNCPPTLYSLMTKCWAYDP  258 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------GHHHHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             CccCchHHHHHHHHHHhcCCCCCCcCCHH--------HHHHHHHcCCC---------CCCCCCCCHHHHHHHHHHccCCh
Confidence            99999999999999996 99998754432        11112222111         11222345678899999999999


Q ss_pred             CCCCCCCccchhhhhhcccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ++||++.++  ++.|+.+..
T Consensus       259 ~~Rps~~~l--~~~l~~~~~  276 (281)
T 1mp8_A          259 SRRPRFTEL--KAQLSTILE  276 (281)
T ss_dssp             GGSCCHHHH--HHHHHHHHH
T ss_pred             hhCcCHHHH--HHHHHHHHH
Confidence            999999999  999887654

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.91  E-value=2.2e-26  Score=205.18  Aligned_cols=135  Identities=21%  Similarity=0.221  Sum_probs=107.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||++.+..+
T Consensus       194 ~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  270 (382)
T 3tt0_A          194 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY  270 (382)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCC
Confidence            5789999999999999   99999999999999986543                          457999999999999


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||++ |..||.....        ..+...+..+..         ...+..+...+.+++.+||+.|
T Consensus       271 ~~~~DiwslG~il~ellt~g~~p~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~d  333 (382)
T 3tt0_A          271 THQSDVWSFGVLLWEIFTLGGSPYPGVPV--------EELFKLLKEGHR---------MDKPSNCTNELYMMMRDCWHAV  333 (382)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHHHHHTTCC---------CCCCSSCCHHHHHHHHHHTCSS
T ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCC---------CCCCccCCHHHHHHHHHHcCCC
Confidence            999999999999999999 9999865432        122222222211         1112233467889999999999


Q ss_pred             CCCCCCCCccchhhhhhccccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLASML  158 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~~~  158 (291)
                      |++||++.++  ++.|+.+.....
T Consensus       334 P~~Rps~~el--l~~L~~~~~~~~  355 (382)
T 3tt0_A          334 PSQRPTFKQL--VEDLDRIVALTS  355 (382)
T ss_dssp             GGGSCCHHHH--HHHHHHHHHHSC
T ss_pred             hhhCcCHHHH--HHHHHHHHHHHh
Confidence            9999999999  999998876543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.91  E-value=1.9e-26  Score=195.35  Aligned_cols=132  Identities=18%  Similarity=0.217  Sum_probs=102.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCC--eEeecCCCCcEEEccCCC-------------------CCccccCccccCCCCcc---
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQ--IIHYNIKPENILLDVKFW-------------------TPGYAAPETWMSFPVTH---   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~--ivH~Dlkp~NIll~~~~~-------------------t~~y~aPE~~~~~~~~~---   57 (291)
                      +.|+.|++.||+|||+   .+  |+||||||+|||++.++.                   |+.|+|||.+.+..++.   
T Consensus       114 ~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~  190 (271)
T 3kmu_A          114 VKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRR  190 (271)
T ss_dssp             HHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTCBSCGGGSCHHHHHSCGGGSCHH
T ss_pred             HHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeecccCccCCccccChhhhccCCCCCCCc
Confidence            5789999999999999   77  999999999999997753                   78899999998765444   


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|+.||......       .........+..         ...+...+..+.+++..||+.||++
T Consensus       191 ~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~  254 (271)
T 3kmu_A          191 SADMWSFAVLLWELVTREVPFADLSNM-------EIGMKVALEGLR---------PTIPPGISPHVSKLMKICMNEDPAK  254 (271)
T ss_dssp             HHHHHHHHHHHHHHHHCSCTTTTSCHH-------HHHHHHHHSCCC---------CCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             hhhHHHHHHHHHHHHhCCCCccccChH-------HHHHHHHhcCCC---------CCCCCCCCHHHHHHHHHHcCCChhh
Confidence            799999999999999999998654321       111111111111         1112233467889999999999999


Q ss_pred             CCCCCccchhhhhhccc
Q 022858          138 MPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       138 RPs~~~v~~~~~L~~~~  154 (291)
                      |||+.++  ++.|+.+.
T Consensus       255 Rps~~~i--l~~L~~l~  269 (271)
T 3kmu_A          255 RPKFDMI--VPILEKMQ  269 (271)
T ss_dssp             SCCHHHH--HHHHHHHC
T ss_pred             CcCHHHH--HHHHHHhh
Confidence            9999999  99988764

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=5.4e-26  Score=199.01  Aligned_cols=136  Identities=18%  Similarity=0.190  Sum_probs=107.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                           ++.|+|||.+.+..
T Consensus       150 ~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  226 (333)
T 1mqb_A          150 VGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK  226 (333)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCC
Confidence            5789999999999999   99999999999999987643                           34699999999889


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++||||||+++|||++ |..||......        .+...+..+.         ..+.+..++..+.+++.+||+.
T Consensus       227 ~~~~~Di~slG~il~ellt~g~~pf~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~  289 (333)
T 1mqb_A          227 FTSASDVWSFGIVMWEVMTYGERPYWELSNH--------EVMKAINDGF---------RLPTPMDCPSAIYQLMMQCWQQ  289 (333)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTC---------CCCCCTTCBHHHHHHHHHHTCS
T ss_pred             CCchhhhHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHHCCC---------cCCCcccCCHHHHHHHHHHcCC
Confidence            9999999999999999998 99998644321        1222222211         1111223456788999999999


Q ss_pred             CCCCCCCCCccchhhhhhcccccccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSLASMLN  159 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~~~~~~  159 (291)
                      ||++||++.++  ++.|+.+......
T Consensus       290 ~p~~Rps~~~l--~~~L~~~~~~~~~  313 (333)
T 1mqb_A          290 ERARRPKFADI--VSILDKLIRAPDS  313 (333)
T ss_dssp             STTTSCCHHHH--HHHHHHHHHSGGG
T ss_pred             ChhhCcCHHHH--HHHHHHHHhcchh
Confidence            99999999999  9999887765443

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.91  E-value=4e-26  Score=193.39  Aligned_cols=133  Identities=20%  Similarity=0.260  Sum_probs=104.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.|+.|++.||+|||+   .+|+||||||+||+++.++.                         ++.|+|||.+.+..++
T Consensus       107 ~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  183 (268)
T 3sxs_A          107 LEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYS  183 (268)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEE
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCc
Confidence            5789999999999999   99999999999999987653                         4469999999988899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++|||++ |..||......        ........+..         ...+......+.+++..||+.||
T Consensus       184 ~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~~p  246 (268)
T 3sxs_A          184 SKSDVWAFGILMWEVFSLGKMPYDLYTNS--------EVVLKVSQGHR---------LYRPHLASDTIYQIMYSCWHELP  246 (268)
T ss_dssp             TTHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTCC---------CCCCTTSCHHHHHHHHHTTCSSG
T ss_pred             hhhhhHHHHHHHHHHHcCCCCCccccChH--------HHHHHHHcCCC---------CCCCCcChHHHHHHHHHHcCCCh
Confidence            99999999999999998 99998654321        11111211111         01111223578899999999999


Q ss_pred             CCCCCCCccchhhhhhccccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ++|||+.++  ++.|+.+.+.
T Consensus       247 ~~Rps~~~l--l~~L~~l~~~  265 (268)
T 3sxs_A          247 EKRPTFQQL--LSSIEPLREK  265 (268)
T ss_dssp             GGSCCHHHH--HHHHGGGCC-
T ss_pred             hhCcCHHHH--HHHHHHhhhc
Confidence            999999999  9999887653

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.91  E-value=2.7e-26  Score=198.73  Aligned_cols=132  Identities=20%  Similarity=0.238  Sum_probs=104.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||.+.+..+
T Consensus       153 ~~i~~qi~~~l~~lH~---~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  229 (314)
T 2ivs_A          153 ISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIY  229 (314)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHHHH---CCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCc
Confidence            5689999999999999   99999999999999986642                          456999999998889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||......        ........+..         ...+...+..+.+++.+||+.|
T Consensus       230 ~~~~Di~slG~il~el~t~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~d  292 (314)
T 2ivs_A          230 TTQSDVWSFGVLLWEIVTLGGNPYPGIPPE--------RLFNLLKTGHR---------MERPDNCSEEMYRLMLQCWKQE  292 (314)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------GHHHHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHhhcCCc---------CCCCccCCHHHHHHHHHHccCC
Confidence            999999999999999999 99998654422        12222222111         1122234467889999999999


Q ss_pred             CCCCCCCCccchhhhhhcccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      |++||++.++  ++.|+.+..
T Consensus       293 p~~Rps~~~l--~~~l~~~~~  311 (314)
T 2ivs_A          293 PDKRPVFADI--SKDLEKMMV  311 (314)
T ss_dssp             GGGSCCHHHH--HHHHHHHHH
T ss_pred             hhhCcCHHHH--HHHHHHHHh
Confidence            9999999999  999887653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=5.1e-26  Score=202.20  Aligned_cols=135  Identities=21%  Similarity=0.209  Sum_probs=105.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMSF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~~   53 (291)
                      +.++.||+.||+|||+   .+|+||||||+|||++.++.                            ++.|+|||.+.+.
T Consensus       195 ~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  271 (373)
T 3c1x_A          195 IGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ  271 (373)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCC
Confidence            5688999999999999   99999999999999987643                            4569999999988


Q ss_pred             CCccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           54 PVTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      .++.++||||||+++|||++ |.+||......    ...    .....+..         ...+..++..+.+++.+||+
T Consensus       272 ~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~----~~~----~~~~~~~~---------~~~p~~~~~~l~~li~~cl~  334 (373)
T 3c1x_A          272 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DIT----VYLLQGRR---------LLQPEYCPDPLYEVMLKCWH  334 (373)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS----CHH----HHHHTTCC---------CCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH----HHH----HHHHcCCC---------CCCCCCCCHHHHHHHHHHcC
Confidence            99999999999999999999 66676544322    111    11111111         11122334678899999999


Q ss_pred             cCCCCCCCCCccchhhhhhccccccc
Q 022858          133 YKPEAMPSMTVRPAKFMLHGSLASML  158 (291)
Q Consensus       133 ~~p~~RPs~~~v~~~~~L~~~~~~~~  158 (291)
                      .||++||++.++  ++.|+.+.....
T Consensus       335 ~dp~~RPs~~el--l~~L~~i~~~~~  358 (373)
T 3c1x_A          335 PKAEMRPSFSEL--VSRISAIFSTFI  358 (373)
T ss_dssp             SSGGGSCCHHHH--HHHHHHHHHTCC
T ss_pred             CChhhCcCHHHH--HHHHHHHHHhcc
Confidence            999999999999  999998876544

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.91  E-value=7.5e-26  Score=197.90  Aligned_cols=151  Identities=15%  Similarity=0.113  Sum_probs=106.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCC---------CeEeecCCCCcEEEccCCC--------------------------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQ---------QIIHYNIKPENILLDVKFW--------------------------------   40 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~---------~ivH~Dlkp~NIll~~~~~--------------------------------   40 (291)
                      ++|+.|++.||+|||+   .         +|+||||||+|||++.++.                                
T Consensus       114 ~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~g  190 (336)
T 3g2f_A          114 CRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVG  190 (336)
T ss_dssp             HHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTS
T ss_pred             HHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCC
Confidence            4689999999999999   6         9999999999999986532                                


Q ss_pred             CCccccCccccC-------CCCccccceechhHHHHHHhhCCCccccccccCCCCchh----------HHHHHHhhcCcc
Q 022858           41 TPGYAAPETWMS-------FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGF----------KWVWKKLEKGEF  103 (291)
Q Consensus        41 t~~y~aPE~~~~-------~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~----------~~~~~~~~~~~~  103 (291)
                      |+.|+|||++.+       ..++.++|||||||++|||++|..|+.............          ............
T Consensus       191 t~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (336)
T 3g2f_A          191 TIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQ  270 (336)
T ss_dssp             CGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCC
T ss_pred             ccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhccccc
Confidence            678999999886       356788999999999999999987765443322211111          111111111100


Q ss_pred             chhhhhcccccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcccccccc
Q 022858          104 QDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLASMLN  159 (291)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~~~~~  159 (291)
                      ...+..  ........+..+.+++.+||+.||++|||+.|+  ++.|+++......
T Consensus       271 ~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~--l~~L~~ll~~~~~  322 (336)
T 3g2f_A          271 RPKFPE--AWKENSLAVRSLKETIEDCWDQDAEARLTAQXA--EERMAELMMIWER  322 (336)
T ss_dssp             CCCCCT--TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHH--HHHHHHHHHCCCC
T ss_pred             CCCCCc--ccccccchHHHHHHHHHHHhcCChhhCcchHHH--HHHHHHHHHHHHh
Confidence            000000  011223456789999999999999999999999  9999988765444

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.91  E-value=6.7e-26  Score=195.30  Aligned_cols=125  Identities=20%  Similarity=0.214  Sum_probs=97.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||++.+..++.
T Consensus       119 ~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  195 (297)
T 3fxz_A          119 AAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP  195 (297)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCT
T ss_pred             HHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCc
Confidence            4689999999999999   99999999999999986543                        77899999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|..||......       .......... ...       ...+......+.+++.+||+.||++
T Consensus       196 ~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~~~~~-~~~-------~~~~~~~~~~~~~li~~~l~~dp~~  260 (297)
T 3fxz_A          196 KVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYLIATNG-TPE-------LQNPEKLSAIFRDFLNRCLEMDVEK  260 (297)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHHC-SCC-------CSCGGGSCHHHHHHHHHHSCSSTTT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCC-CCC-------CCCccccCHHHHHHHHHHccCChhH
Confidence            999999999999999999999654321       1111111111 000       1112233467889999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      |||+.|+
T Consensus       261 Rps~~el  267 (297)
T 3fxz_A          261 RGSAKEL  267 (297)
T ss_dssp             SCCHHHH
T ss_pred             CcCHHHH
Confidence            9999999

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.91  E-value=1.4e-25  Score=209.40  Aligned_cols=126  Identities=18%  Similarity=0.204  Sum_probs=98.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC--C-----------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--W-----------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~--~-----------------------t~~y~aPE~~~~~~~~   56 (291)
                      ..|+.||+.||+|||+   ++|+||||||+|||++.+.  .                       |+.|||||++.+..|+
T Consensus       258 ~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~  334 (573)
T 3uto_A          258 VEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG  334 (573)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBC
T ss_pred             HHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCC
Confidence            4688999999999999   9999999999999998541  1                       8899999999999999


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++||||+||++|||++|..||.+....        .....+......      ............+.+|+.+||+.||.
T Consensus       335 ~~~DiWSlGvilyeml~G~~Pf~~~~~~--------~~~~~i~~~~~~------~~~~~~~~~s~~~~dli~~~L~~dp~  400 (573)
T 3uto_A          335 YYTDMWSVGVLSYILLSGLSPFGGENDD--------ETLRNVKSCDWN------MDDSAFSGISEDGKDFIRKLLLADPN  400 (573)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTTCCC------CCSGGGTTSCHHHHHHHHTTSCSSGG
T ss_pred             cHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHhCCCC------CCcccccCCCHHHHHHHHHHccCChh
Confidence            9999999999999999999999755432        122222222111      00111122345678899999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +||++.|+
T Consensus       401 ~R~t~~e~  408 (573)
T 3uto_A          401 TRMTIHQA  408 (573)
T ss_dssp             GSCCHHHH
T ss_pred             HCcCHHHH
Confidence            99999998

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.91  E-value=3.9e-26  Score=210.19  Aligned_cols=132  Identities=21%  Similarity=0.228  Sum_probs=105.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.++.                         ++.|+|||.+.+..++
T Consensus       321 ~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  397 (495)
T 1opk_A          321 LYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS  397 (495)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEEC
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCC
Confidence            5688999999999999   99999999999999986532                         4579999999988999


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++|||||||++|||++ |..||......        .+...+..+         .....+..++..+.+++.+||+.||
T Consensus       398 ~~sDvwSlG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~---------~~~~~~~~~~~~l~~li~~cl~~dP  460 (495)
T 1opk_A          398 IKSDVWAFGVLLWEIATYGMSPYPGIDLS--------QVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNP  460 (495)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------GHHHHHHTT---------CCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             cHHhHHhHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcC---------CCCCCCCCCCHHHHHHHHHHcCcCh
Confidence            99999999999999999 99998654322        122222221         1112233445788899999999999


Q ss_pred             CCCCCCCccchhhhhhcccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ++||++.++  ++.|+....
T Consensus       461 ~~RPs~~el--~~~L~~~~~  478 (495)
T 1opk_A          461 SDRPSFAEI--HQAFETMFQ  478 (495)
T ss_dssp             GGSCCHHHH--HHHHHTSCS
T ss_pred             hHCcCHHHH--HHHHHHHHh
Confidence            999999999  999987753

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.91  E-value=4.1e-26  Score=207.86  Aligned_cols=133  Identities=24%  Similarity=0.257  Sum_probs=106.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.++.                         ++.|+|||.+.+..++
T Consensus       283 ~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  359 (452)
T 1fmk_A          283 VDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT  359 (452)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCC
Confidence            5789999999999999   99999999999999986532                         4679999999988999


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++|||++ |+.||......        .+...+..+.         ..+.+..++..+.+++.+||+.||
T Consensus       360 ~~sDvwslG~~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~---------~~~~~~~~~~~l~~li~~cl~~dP  422 (452)
T 1fmk_A          360 IKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGY---------RMPCPPECPESLHDLMCQCWRKEP  422 (452)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTC---------CCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             ccccHHhHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCC---------CCCCCCCCCHHHHHHHHHHccCCh
Confidence            99999999999999999 89998654321        1222222221         112223455788999999999999


Q ss_pred             CCCCCCCccchhhhhhccccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ++|||+.++  ++.|+.....
T Consensus       423 ~~Rpt~~~l--~~~L~~~~~~  441 (452)
T 1fmk_A          423 EERPTFEYL--QAFLEDYFTS  441 (452)
T ss_dssp             GGSCCHHHH--HHHHHTTTSC
T ss_pred             hhCcCHHHH--HHHHHHHhcc
Confidence            999999999  9999887643

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=3.7e-26  Score=200.55  Aligned_cols=134  Identities=21%  Similarity=0.216  Sum_probs=104.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||.+.+..+
T Consensus       175 ~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  251 (344)
T 1rjb_A          175 LCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIY  251 (344)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCC
Confidence            4689999999999999   99999999999999986643                          457999999988899


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||+| |..||......       .........+.         ....+......+.+++.+||+.|
T Consensus       252 ~~~~Di~slG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~d  315 (344)
T 1rjb_A          252 TIKSDVWSYGILLWEIFSLGVNPYPGIPVD-------ANFYKLIQNGF---------KMDQPFYATEEIYIIMQSCWAFD  315 (344)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-------HHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ChhHhHHHHHHHHHHHHcCCCCCcccCCcH-------HHHHHHHhcCC---------CCCCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999998 99998655321       11122222211         11112233467889999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |.+||++.++  ++.|+.....
T Consensus       316 p~~Rps~~~l--~~~l~~~~~~  335 (344)
T 1rjb_A          316 SRKRPSFPNL--TSFLGCQLAD  335 (344)
T ss_dssp             GGGSCCHHHH--HHHHHHHC--
T ss_pred             chhCcCHHHH--HHHHHHHHHH
Confidence            9999999999  9999887654

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.91  E-value=4.8e-25  Score=192.36  Aligned_cols=141  Identities=22%  Similarity=0.257  Sum_probs=90.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.+..                           |+.|+|||.+.+..
T Consensus       109 ~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  185 (325)
T 3kn6_A          109 SYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNG  185 (325)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------------------CC
T ss_pred             HHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCC
Confidence            4689999999999999   99999999999999975431                           67899999999989


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||||+++|||++|..||........... .......+..+....      ...........+.+++.+||+.|
T Consensus       186 ~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~-~~~~~~~i~~~~~~~------~~~~~~~~s~~~~~li~~~L~~d  258 (325)
T 3kn6_A          186 YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTS-AVEIMKKIKKGDFSF------EGEAWKNVSQEAKDLIQGLLTVD  258 (325)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCTTC-------CCC-HHHHHHHHTTTCCCC------CSHHHHTSCHHHHHHHHHHHCCC
T ss_pred             CCCccchHHHHHHHHHHHhCCCCCCCCcccccccc-HHHHHHHHHcCCCCC------CcccccCCCHHHHHHHHHHCCCC
Confidence            99999999999999999999999976543321111 122333333322210      01111234567889999999999


Q ss_pred             CCCCCCCCccchhhhhhc
Q 022858          135 PEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~  152 (291)
                      |.+||++.++....++..
T Consensus       259 P~~Rpt~~ell~h~w~~~  276 (325)
T 3kn6_A          259 PNKRLKMSGLRYNEWLQD  276 (325)
T ss_dssp             TTTCCCTTTSTTCGGGCT
T ss_pred             hhHCCCHHHHhcChhhcc
Confidence            999999999943344443

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.91  E-value=3.2e-26  Score=200.70  Aligned_cols=133  Identities=17%  Similarity=0.192  Sum_probs=105.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||.+.+..+
T Consensus       177 ~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  253 (343)
T 1luf_A          177 LCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRY  253 (343)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCc
Confidence            4589999999999999   99999999999999986533                          567999999998889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||.....        ......+..+...         ..+..++..+.+++.+||+.|
T Consensus       254 ~~~~Di~slG~il~el~t~g~~p~~~~~~--------~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~  316 (343)
T 1luf_A          254 TTESDVWAYGVVLWEIFSYGLQPYYGMAH--------EEVIYYVRDGNIL---------ACPENCPLELYNLMRLCWSKL  316 (343)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHHHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             CcccccHHHHHHHHHHHhcCCCcCCCCCh--------HHHHHHHhCCCcC---------CCCCCCCHHHHHHHHHHcccC
Confidence            999999999999999999 9999865432        1122223222221         112234467889999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |++||++.++  ++.|+++...
T Consensus       317 p~~Rps~~~~--~~~L~~~~~~  336 (343)
T 1luf_A          317 PADRPSFCSI--HRILQRMCER  336 (343)
T ss_dssp             GGGSCCHHHH--HHHHHHTTC-
T ss_pred             cccCCCHHHH--HHHHHHHHhh
Confidence            9999999999  9999887654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=3.5e-25  Score=193.55  Aligned_cols=147  Identities=18%  Similarity=0.162  Sum_probs=103.5

Q ss_pred             hhHHHHHHHHHHHHhcCC-----CCCeEeecCCCCcEEEccCCC----------------------------CCccccCc
Q 022858            2 HIIAIGTAEGIVSLHDGC-----QQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPE   48 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~-----~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE   48 (291)
                      +.|+.|++.||+|||+.+     ..+|+||||||+|||++.++.                            |+.|+|||
T Consensus       137 ~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE  216 (337)
T 3mdy_A          137 LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE  216 (337)
T ss_dssp             HHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChh
Confidence            578999999999999821     129999999999999986542                            67899999


Q ss_pred             cccCCCCccc------cceechhHHHHHHhhC----------CCccccccccCCCCchhHHHHHHhhcCccchhhhhccc
Q 022858           49 TWMSFPVTHK------CDVRSFGMLLFEILGR----------RRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGM  112 (291)
Q Consensus        49 ~~~~~~~~~~------~Dv~s~G~~l~elltg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (291)
                      ++.+...+.+      +|||||||++|||++|          ..||........   ....................   
T Consensus       217 ~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---  290 (337)
T 3mdy_A          217 VLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP---SYEDMREIVCIKKLRPSFPN---  290 (337)
T ss_dssp             HHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC---CHHHHHHHHTTSCCCCCCCG---
T ss_pred             hcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC---chhhhHHHHhhhccCccccc---
Confidence            9987665554      9999999999999999          445443322111   11111111111111110000   


Q ss_pred             ccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhccccc
Q 022858          113 EKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       113 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ......++..+.+++.+||+.||.+||++.++  ++.|+.+.+.
T Consensus       291 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el--l~~L~~l~~~  332 (337)
T 3mdy_A          291 RWSSDECLRQMGKLMTECWAHNPASRLTALRV--KKTLAKMSES  332 (337)
T ss_dssp             GGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHH--HHHHHHHHHT
T ss_pred             cchhhHHHHHHHHHHHHhhhhChhhCCCHHHH--HHHHHHHHhh
Confidence            11123677889999999999999999999999  9999887654

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.91  E-value=5.8e-26  Score=197.49  Aligned_cols=133  Identities=19%  Similarity=0.244  Sum_probs=105.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++|+.|++.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||.+.+..+
T Consensus       141 ~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  217 (322)
T 1p4o_A          141 IQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVF  217 (322)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCC
Confidence            4688999999999999   99999999999999987653                          456999999998889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||......        ........+...         ..+...+..+.+++.+||+.|
T Consensus       218 ~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~d  280 (322)
T 1p4o_A          218 TTYSDVWSFGVVLWEIATLAEQPYQGLSNE--------QVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYN  280 (322)
T ss_dssp             CHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--------HHHHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             CchhhHHHHHHHHHHHHhcCCCccccCCHH--------HHHHHHHcCCcC---------CCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999999 88888654321        122222222111         112234467889999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |.+||++.++  ++.|++....
T Consensus       281 p~~Rps~~e~--l~~L~~~~~~  300 (322)
T 1p4o_A          281 PKMRPSFLEI--ISSIKEEMEP  300 (322)
T ss_dssp             GGGSCCHHHH--HHHHGGGSCT
T ss_pred             cccCcCHHHH--HHHHHHhhcc
Confidence            9999999999  9999887653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.91  E-value=3.2e-26  Score=194.19  Aligned_cols=132  Identities=18%  Similarity=0.226  Sum_probs=103.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.|+.|++.||+|||+   .+|+||||||+||+++.++.                         ++.|+|||.+.+..++
T Consensus       109 ~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  185 (269)
T 4hcu_A          109 LGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS  185 (269)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCC
Confidence            5688999999999999   99999999999999986543                         4569999999988999


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||+|+++|||++ |..||......        .....+..+.         ....+......+.+++.+|++.||
T Consensus       186 ~~~Di~slG~~l~~ll~~g~~p~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p  248 (269)
T 4hcu_A          186 SKSDVWSFGVLMWEVFSEGKIPYENRSNS--------EVVEDISTGF---------RLYKPRLASTHVYQIMNHCWRERP  248 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTC---------CCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             chhhhHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHhcCc---------cCCCCCcCCHHHHHHHHHHccCCc
Confidence            99999999999999999 99998654321        1222222211         111112234678899999999999


Q ss_pred             CCCCCCCccchhhhhhcccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ++||++.++  ++.|+++.+
T Consensus       249 ~~Rps~~~l--l~~l~~l~~  266 (269)
T 4hcu_A          249 EDRPAFSRL--LRQLAEIAE  266 (269)
T ss_dssp             GGSCCHHHH--HHHHHHHHH
T ss_pred             ccCcCHHHH--HHHHHHHHH
Confidence            999999999  999987754

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.91  E-value=7.2e-26  Score=196.17  Aligned_cols=133  Identities=19%  Similarity=0.219  Sum_probs=105.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||.|||+   .+|+||||||+|||++.++.                          ++.|+|||.+.+..+
T Consensus       150 ~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  226 (313)
T 3brb_A          150 LKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVY  226 (313)
T ss_dssp             HHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCC
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCc
Confidence            5789999999999999   99999999999999987643                          457999999999899


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||......        ........+..         ...+...+..+.+++.+||+.|
T Consensus       227 ~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~d  289 (313)
T 3brb_A          227 TSKSDVWAFGVTMWEIATRGMTPYPGVQNH--------EMYDYLLHGHR---------LKQPEDCLDELYEIMYSCWRTD  289 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------GHHHHHHTTCC---------CCCBTTCCHHHHHHHHHTTCSS
T ss_pred             cchhhhHHHHHHHHHHHhcCCCCCccCCHH--------HHHHHHHcCCC---------CCCCccccHHHHHHHHHHcCCC
Confidence            999999999999999999 88888654322        11111211111         1122234467889999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |.+||++.++  ++.|+.+...
T Consensus       290 p~~Rps~~~l--~~~L~~l~~~  309 (313)
T 3brb_A          290 PLDRPTFSVL--RLQLEKLLES  309 (313)
T ss_dssp             GGGSCCHHHH--HHHHHHHHHH
T ss_pred             hhhCcCHHHH--HHHHHHHHHh
Confidence            9999999999  9999887654

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.91  E-value=4.1e-26  Score=194.73  Aligned_cols=133  Identities=19%  Similarity=0.194  Sum_probs=104.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                         ++.|+|||.+.+..++
T Consensus       116 ~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  192 (281)
T 3cc6_A          116 VLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT  192 (281)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCC
Confidence            4688999999999999   99999999999999986542                         4579999999888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++|||++ |+.||......    .    .......+..         ...+......+.+++.+|++.||
T Consensus       193 ~~~Di~slG~il~~llt~g~~p~~~~~~~----~----~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~~p  255 (281)
T 3cc6_A          193 TASDVWMFAVCMWEILSFGKQPFFWLENK----D----VIGVLEKGDR---------LPKPDLCPPVLYTLMTRCWDYDP  255 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCTTTTSCGG----G----HHHHHHHTCC---------CCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             chhccHHHHHHHHHHHhCCCCCcccCChH----H----HHHHHhcCCC---------CCCCCCCCHHHHHHHHHHccCCc
Confidence            99999999999999998 99998644322    0    1111111111         11112234678899999999999


Q ss_pred             CCCCCCCccchhhhhhccccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ++||++.++  ++.|+.+...
T Consensus       256 ~~Rps~~el--l~~L~~~~~~  274 (281)
T 3cc6_A          256 SDRPRFTEL--VCSLSDVYQM  274 (281)
T ss_dssp             GGSCCHHHH--HHHHHHHHHH
T ss_pred             hhCcCHHHH--HHHHHHHHHh
Confidence            999999999  9998877543

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.91  E-value=1.4e-25  Score=191.90  Aligned_cols=132  Identities=23%  Similarity=0.198  Sum_probs=100.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCC--eEeecCCCCcEEEccCCC--------------------------CCccccCcccc--
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQ--IIHYNIKPENILLDVKFW--------------------------TPGYAAPETWM--   51 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~--ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~--   51 (291)
                      +.++.|++.||+|||+   .+  |+||||||+|||++.+..                          ++.|+|||.+.  
T Consensus       125 ~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~  201 (287)
T 4f0f_A          125 LRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAE  201 (287)
T ss_dssp             HHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCS
T ss_pred             HHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccccccccCCCccccCchhhccC
Confidence            5689999999999999   78  999999999999965431                          78899999984  


Q ss_pred             CCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcc
Q 022858           52 SFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRV  131 (291)
Q Consensus        52 ~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  131 (291)
                      ...++.++||||||+++|||++|+.||......     ...........+         .....+...+..+.+++.+||
T Consensus       202 ~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l  267 (287)
T 4f0f_A          202 EESYTEKADTYSFAMILYTILTGEGPFDEYSYG-----KIKFINMIREEG---------LRPTIPEDCPPRLRNVIELCW  267 (287)
T ss_dssp             SCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC-----HHHHHHHHHHSC---------CCCCCCTTSCHHHHHHHHHHT
T ss_pred             CCCcCchhhHHHHHHHHHHHHcCCCCCcccccc-----HHHHHHHHhccC---------CCCCCCcccCHHHHHHHHHHh
Confidence            456789999999999999999999999654322     111111111111         111122334567899999999


Q ss_pred             ccCCCCCCCCCccchhhhhhc
Q 022858          132 QYKPEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       132 ~~~p~~RPs~~~v~~~~~L~~  152 (291)
                      +.||.+||++.++  ++.|++
T Consensus       268 ~~dp~~Rps~~~l--l~~L~~  286 (287)
T 4f0f_A          268 SGDPKKRPHFSYI--VKELSE  286 (287)
T ss_dssp             CSSGGGSCCHHHH--HHHHHT
T ss_pred             cCChhhCcCHHHH--HHHHHh
Confidence            9999999999999  988875

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.91  E-value=1.5e-25  Score=192.08  Aligned_cols=137  Identities=24%  Similarity=0.285  Sum_probs=105.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCcccc---C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWM---S   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~---~   52 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||.+.   +
T Consensus       123 ~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  199 (289)
T 3og7_A          123 IDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS  199 (289)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----
T ss_pred             HHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCC
Confidence            5789999999999999   99999999999999986542                          77899999986   5


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++||||||+++|||++|+.||......       .........+......     ......++..+.+++.+||+
T Consensus       200 ~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~~l~  267 (289)
T 3og7_A          200 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-------DQIIEMVGRGSLSPDL-----SKVRSNCPKRMKRLMAECLK  267 (289)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH-------HHHHHHHHHTSCCCCT-----TSSCTTSCHHHHHHHHHHTC
T ss_pred             CCCCcccchHHHHHHHHHHHHCCCCccccchH-------HHHHHHhcccccCcch-----hhccccCCHHHHHHHHHHcc
Confidence            67888999999999999999999999654321       2222222222221111     11122345788999999999


Q ss_pred             cCCCCCCCCCccchhhhhhcccc
Q 022858          133 YKPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       133 ~~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      .||++||++.++  ++.|+++..
T Consensus       268 ~~p~~Rps~~el--l~~L~~l~~  288 (289)
T 3og7_A          268 KKRDERPSFPRI--LAEIEELAR  288 (289)
T ss_dssp             SSGGGSCCHHHH--HHHHHHTTC
T ss_pred             CChhhCCCHHHH--HHHHHHHhh
Confidence            999999999999  999987653

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.91  E-value=1.3e-26  Score=201.62  Aligned_cols=151  Identities=17%  Similarity=0.148  Sum_probs=109.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                           +..|+|||.+.+..
T Consensus       137 ~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  213 (318)
T 3lxp_A          137 LLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK  213 (318)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCC
Confidence            5789999999999999   99999999999999987653                           45599999999888


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||||+++|||++|..|+........  ....+.........+.+.+........+..++..+.+++.+||+.|
T Consensus       214 ~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  291 (318)
T 3lxp_A          214 FYYASDVWSFGVTLYELLTHCDSSQSPPTKFL--ELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETE  291 (318)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH--HHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCcccccchhhh--hhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCC
Confidence            99999999999999999999999865432100  0000000000000111222222222333445578899999999999


Q ss_pred             CCCCCCCCccchhhhhhcccccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLASMLN  159 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~~~~  159 (291)
                      |++||++.++  ++.|+.+......
T Consensus       292 P~~Rps~~el--l~~L~~l~~~~~~  314 (318)
T 3lxp_A          292 ASFRPTFENL--IPILKTVHEKYQG  314 (318)
T ss_dssp             GGGSCCHHHH--HHHHHHHHHHHHC
T ss_pred             cccCcCHHHH--HHHHHHHHHhhcc
Confidence            9999999999  9999888765443

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.91  E-value=4.6e-25  Score=196.94  Aligned_cols=139  Identities=23%  Similarity=0.232  Sum_probs=101.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCC-CeEeecCCCCcEEEccCC-----------------------------------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQ-QIIHYNIKPENILLDVKF-----------------------------------------   39 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~-~ivH~Dlkp~NIll~~~~-----------------------------------------   39 (291)
                      +.|+.||+.||+|||+   + +|+||||||+|||++.++                                         
T Consensus       149 ~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (397)
T 1wak_A          149 KKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPL  225 (397)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTT
T ss_pred             HHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCccccccccccc
Confidence            5689999999999999   7 999999999999998552                                         


Q ss_pred             -----------------------------CCCccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCch
Q 022858           40 -----------------------------WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSG   90 (291)
Q Consensus        40 -----------------------------~t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~   90 (291)
                                                   +|+.|+|||++.+..++.++|||||||++|||++|+.||......... ..
T Consensus       226 ~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-~~  304 (397)
T 1wak_A          226 EPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYT-RD  304 (397)
T ss_dssp             SGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSC-HH
T ss_pred             ccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccC-ch
Confidence                                         178899999999989999999999999999999999999765433111 11


Q ss_pred             hHHHHHHhh-cCccch-hhhh-----------------------------cccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           91 FKWVWKKLE-KGEFQD-LIIV-----------------------------CGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        91 ~~~~~~~~~-~~~~~~-~~~~-----------------------------~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      ......... .+.... .+..                             .............+.+|+.+||+.||++||
T Consensus       305 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  384 (397)
T 1wak_A          305 EDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRA  384 (397)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSC
T ss_pred             HHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcC
Confidence            111111000 000000 0000                             000123456678899999999999999999


Q ss_pred             CCCcc
Q 022858          140 SMTVR  144 (291)
Q Consensus       140 s~~~v  144 (291)
                      |+.|+
T Consensus       385 t~~e~  389 (397)
T 1wak_A          385 TAAEC  389 (397)
T ss_dssp             CHHHH
T ss_pred             CHHHH
Confidence            99998

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.91  E-value=7.2e-25  Score=190.02  Aligned_cols=120  Identities=21%  Similarity=0.335  Sum_probs=94.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                       |+.|+|||++.+ .++.+
T Consensus       160 ~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~  235 (311)
T 3p1a_A          160 WGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTA  235 (311)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGT-CCSTH
T ss_pred             HHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcC-CCCch
Confidence            5689999999999999   99999999999999986532                       779999998876 78999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|||||||++|||++|..++.....           ...+..+......        .......+.+++.+||+.||++|
T Consensus       236 ~DiwslG~il~el~~g~~~~~~~~~-----------~~~~~~~~~~~~~--------~~~~~~~l~~li~~~L~~dP~~R  296 (311)
T 3p1a_A          236 ADVFSLGLTILEVACNMELPHGGEG-----------WQQLRQGYLPPEF--------TAGLSSELRSVLVMMLEPDPKLR  296 (311)
T ss_dssp             HHHHHHHHHHHHHHHTCCCCSSHHH-----------HHHHTTTCCCHHH--------HTTSCHHHHHHHHHHSCSSTTTS
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCccH-----------HHHHhccCCCccc--------ccCCCHHHHHHHHHHcCCChhhC
Confidence            9999999999999999776643321           1222222221111        11234678899999999999999


Q ss_pred             CCCCcc
Q 022858          139 PSMTVR  144 (291)
Q Consensus       139 Ps~~~v  144 (291)
                      |++.|+
T Consensus       297 pt~~el  302 (311)
T 3p1a_A          297 ATAEAL  302 (311)
T ss_dssp             CCHHHH
T ss_pred             cCHHHH
Confidence            999998

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.91  E-value=7.7e-25  Score=194.09  Aligned_cols=149  Identities=22%  Similarity=0.247  Sum_probs=101.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCC-CeEeecCCCCcEEEccCC---------------------------CCCccccCccccCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQ-QIIHYNIKPENILLDVKF---------------------------WTPGYAAPETWMSF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~-~ivH~Dlkp~NIll~~~~---------------------------~t~~y~aPE~~~~~   53 (291)
                      +.|+.||+.||+|||+   . +|+||||||+|||++.+.                           +|+.|+|||++.+.
T Consensus       134 ~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~  210 (373)
T 1q8y_A          134 KQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGA  210 (373)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCC
Confidence            5689999999999999   7 999999999999995211                           17889999999998


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhh-cCccchhh-------------------------
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLE-KGEFQDLI-------------------------  107 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------------------------  107 (291)
                      .++.++|||||||++|||++|..||.......... ....+..... -+......                         
T Consensus       211 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (373)
T 1q8y_A          211 PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK-DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKF  289 (373)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCCC---------C-HHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCB
T ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCC-hHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccc
Confidence            99999999999999999999999997654321111 1111111100 00000000                         


Q ss_pred             ----h-hcccccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhccc
Q 022858          108 ----I-VCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       108 ----~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~  154 (291)
                          . .......+......+.+++.+||+.||++|||+.|+.....+.+..
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  341 (373)
T 1q8y_A          290 WPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  341 (373)
T ss_dssp             CCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             cchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence                0 0001123456778899999999999999999999994334565543

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.91  E-value=8.7e-26  Score=192.41  Aligned_cols=132  Identities=20%  Similarity=0.194  Sum_probs=105.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCccccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.++.                     ++.|+|||.+.+..++.++|
T Consensus       120 ~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  196 (278)
T 1byg_A          120 LKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD  196 (278)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccccCCCccccccCHHHhCCCCCCchhc
Confidence            5688999999999999   99999999999999986643                     67899999998888999999


Q ss_pred             eechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           61 VRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        61 v~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      |||||+++|||++ |..||......        ........+..         ...+...+..+.+++.+||+.||++||
T Consensus       197 i~slG~il~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rp  259 (278)
T 1byg_A          197 VWSFGILLWEIYSFGRVPYPRIPLK--------DVVPRVEKGYK---------MDAPDGCPPAVYEVMKNCWHLDAAMRP  259 (278)
T ss_dssp             HHHHHHHHHHHHTTSCCSCTTSCGG--------GHHHHHTTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHhcCCC---------CCCcccCCHHHHHHHHHHhcCChhhCC
Confidence            9999999999998 99998654321        11222222111         111223346788999999999999999


Q ss_pred             CCCccchhhhhhcccc
Q 022858          140 SMTVRPAKFMLHGSLA  155 (291)
Q Consensus       140 s~~~v~~~~~L~~~~~  155 (291)
                      ++.++  ++.|+.+..
T Consensus       260 s~~~l--~~~L~~i~~  273 (278)
T 1byg_A          260 SFLQL--REQLEHIKT  273 (278)
T ss_dssp             CHHHH--HHHHHHHHH
T ss_pred             CHHHH--HHHHHHHHh
Confidence            99999  999887754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.91  E-value=6.3e-26  Score=193.71  Aligned_cols=132  Identities=15%  Similarity=0.189  Sum_probs=104.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                         ++.|+|||.+.+..++
T Consensus       123 ~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  199 (283)
T 3gen_A          123 LEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS  199 (283)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCS
T ss_pred             HHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCC
Confidence            5789999999999999   99999999999999987653                         4569999999988899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++|||++ |+.||......        .....+..+.         ....+......+.+++.+||+.||
T Consensus       200 ~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~~p  262 (283)
T 3gen_A          200 SKSDIWAFGVLMWEIYSLGKMPYERFTNS--------ETAEHIAQGL---------RLYRPHLASEKVYTIMYSCWHEKA  262 (283)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTC---------CCCCCTTCCHHHHHHHHHTTCSSG
T ss_pred             chhhHHHHHHHHHHHHhCCCCCccccChh--------HHHHHHhccc---------CCCCCCcCCHHHHHHHHHHccCCh
Confidence            99999999999999998 99998654321        1112222111         011112223678899999999999


Q ss_pred             CCCCCCCccchhhhhhcccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ++||++.++  ++.|+.+..
T Consensus       263 ~~Rps~~~l--l~~L~~~~~  280 (283)
T 3gen_A          263 DERPTFKIL--LSNILDVMD  280 (283)
T ss_dssp             GGSCCHHHH--HHHHHHHHH
T ss_pred             hHCcCHHHH--HHHHHHHhh
Confidence            999999999  999887654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.91  E-value=5e-26  Score=198.90  Aligned_cols=133  Identities=19%  Similarity=0.211  Sum_probs=103.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||.+.+..+
T Consensus       167 ~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  243 (333)
T 2i1m_A          167 LHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY  243 (333)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHhc---CCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCC
Confidence            4688999999999999   99999999999999986532                          457999999998899


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||......       .........+         .....+...+..+.+++.+||+.|
T Consensus       244 ~~~~Di~slG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~~  307 (333)
T 2i1m_A          244 TVQSDVWSYGILLWEIFSLGLNPYPGILVN-------SKFYKLVKDG---------YQMAQPAFAPKNIYSIMQACWALE  307 (333)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-------HHHHHHHHHT---------CCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ChHHHHHHHHHHHHHHHcCCCCCCcccchh-------HHHHHHHhcC---------CCCCCCCCCCHHHHHHHHHHhccC
Confidence            999999999999999998 88898654321       1111111111         111112223467889999999999


Q ss_pred             CCCCCCCCccchhhhhhcccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      |.+||++.++  ++.|+....
T Consensus       308 p~~Rps~~~l--~~~L~~~~~  326 (333)
T 2i1m_A          308 PTHRPTFQQI--CSFLQEQAQ  326 (333)
T ss_dssp             GGGSCCHHHH--HHHHHHHHH
T ss_pred             hhhCcCHHHH--HHHHHHHHH
Confidence            9999999999  999887654

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.91  E-value=7.2e-26  Score=194.26  Aligned_cols=133  Identities=22%  Similarity=0.267  Sum_probs=105.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                           ++.|+|||.+.+..
T Consensus       120 ~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  196 (291)
T 1xbb_A          120 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK  196 (291)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCC
Confidence            5789999999999999   99999999999999986542                           36699999998888


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++||||||+++|||++ |+.||......        .+...+..+..         ...+...+..+.+++.+||+.
T Consensus       197 ~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~  259 (291)
T 1xbb_A          197 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------EVTAMLEKGER---------MGCPAGCPREMYDLMNLCWTY  259 (291)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCC---------CCCCTTCCHHHHHHHHHHTCS
T ss_pred             CChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCC---------CCCCCCCCHHHHHHHHHHcCC
Confidence            9999999999999999999 99998754321        12222222211         112223456789999999999


Q ss_pred             CCCCCCCCCccchhhhhhccccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ||++||++.++  ++.|++....
T Consensus       260 dp~~Rps~~~l--~~~L~~~~~~  280 (291)
T 1xbb_A          260 DVENRPGFAAV--ELRLRNYYYD  280 (291)
T ss_dssp             STTTSCCHHHH--HHHHHHHHHH
T ss_pred             ChhhCcCHHHH--HHHHHHHHHH
Confidence            99999999999  9999887554

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.91  E-value=6.4e-26  Score=196.23  Aligned_cols=134  Identities=18%  Similarity=0.226  Sum_probs=104.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||.+.+..+
T Consensus       148 ~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  224 (313)
T 1t46_A          148 LSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY  224 (313)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCC
Confidence            5688999999999999   99999999999999986543                          456999999988899


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||......       .........+         .....+...+..+.+++.+|++.|
T Consensus       225 ~~~~Di~slG~il~ellt~g~~p~~~~~~~-------~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~d  288 (313)
T 1t46_A          225 TFESDVWSYGIFLWELFSLGSSPYPGMPVD-------SKFYKMIKEG---------FRMLSPEHAPAEMYDIMKTCWDAD  288 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTCCSS-------HHHHHHHHHT---------CCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCCCcccch-------hHHHHHhccC---------CCCCCcccCCHHHHHHHHHHcCCC
Confidence            999999999999999998 99998654321       1111122111         111112233467889999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |.+||++.++  ++.|++....
T Consensus       289 p~~Rps~~el--l~~L~~~~~~  308 (313)
T 1t46_A          289 PLKRPTFKQI--VQLIEKQISE  308 (313)
T ss_dssp             GGGSCCHHHH--HHHHHHHHHH
T ss_pred             chhCcCHHHH--HHHHHHHHHH
Confidence            9999999999  9999887653

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=1.7e-25  Score=192.30  Aligned_cols=137  Identities=22%  Similarity=0.262  Sum_probs=104.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMSF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~~   53 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                            ++.|+|||.+.+.
T Consensus       127 ~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  203 (298)
T 3pls_A          127 ISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTY  203 (298)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccC
Confidence            5788999999999999   99999999999999987643                            4579999999998


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      .++.++||||||+++|||++|..|+......       .........+.         ....+......+.+++.+|++.
T Consensus       204 ~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-------~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~  267 (298)
T 3pls_A          204 RFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-------FDLTHFLAQGR---------RLPQPEYCPDSLYQVMQQCWEA  267 (298)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-------GGHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCS
T ss_pred             CCChhhchhhHHHHHHHHhhCCCCCCccCCH-------HHHHHHhhcCC---------CCCCCccchHHHHHHHHHHccC
Confidence            9999999999999999999966554322211       01111111111         1111222346788999999999


Q ss_pred             CCCCCCCCCccchhhhhhcccccccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSLASMLN  159 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~~~~~~  159 (291)
                      ||.+|||+.++  ++.|+++......
T Consensus       268 ~p~~Rps~~~l--l~~l~~~~~~l~~  291 (298)
T 3pls_A          268 DPAVRPTFRVL--VGEVEQIVSALLG  291 (298)
T ss_dssp             SGGGSCCHHHH--HHHHHHHHHHCCS
T ss_pred             ChhhCcCHHHH--HHHHHHHHHHHhc
Confidence            99999999999  9999988765443

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.91  E-value=7.4e-26  Score=198.07  Aligned_cols=135  Identities=21%  Similarity=0.214  Sum_probs=106.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.||+.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||++.+..+
T Consensus       160 ~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  236 (334)
T 2pvf_A          160 VSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY  236 (334)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHHHh---CCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCc
Confidence            5688999999999999   99999999999999986643                          456999999988889


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||......        .+...+..+..         ...+..+...+.+++.+||+.|
T Consensus       237 ~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~d  299 (334)
T 2pvf_A          237 THQSDVWSFGVLMWEIFTLGGSPYPGIPVE--------ELFKLLKEGHR---------MDKPANCTNELYMMMRDCWHAV  299 (334)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHHHHHHHTCC---------CCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--------HHHHHHhcCCC---------CCCCccCCHHHHHHHHHHccCC
Confidence            999999999999999999 99998654321        12222222211         1112234467889999999999


Q ss_pred             CCCCCCCCccchhhhhhccccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLASML  158 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~~~  158 (291)
                      |.+||++.++  ++.|+.+.....
T Consensus       300 p~~Rps~~el--l~~L~~l~~~~~  321 (334)
T 2pvf_A          300 PSQRPTFKQL--VEDLDRILTLTT  321 (334)
T ss_dssp             GGGSCCHHHH--HHHHHHHHHHHC
T ss_pred             hhhCcCHHHH--HHHHHHHHhccc
Confidence            9999999999  999998876543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.90  E-value=2.8e-25  Score=192.73  Aligned_cols=135  Identities=18%  Similarity=0.217  Sum_probs=102.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------------CCccccCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------------TPGYAAPE   48 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------------t~~y~aPE   48 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                                 ++.|+|||
T Consensus       137 ~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  213 (317)
T 2buj_A          137 LWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE  213 (317)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGG
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHh
Confidence            5689999999999999   99999999999999986643                                 66799999


Q ss_pred             cccCCC---CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHH
Q 022858           49 TWMSFP---VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMAL  125 (291)
Q Consensus        49 ~~~~~~---~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (291)
                      .+.+..   ++.++||||||+++|||++|+.||........  ....    .....         ...+........+.+
T Consensus       214 ~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~----~~~~~---------~~~~~~~~~~~~l~~  278 (317)
T 2buj_A          214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD--SVAL----AVQNQ---------LSIPQSPRHSSALWQ  278 (317)
T ss_dssp             GSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS--CHHH----HHHCC-----------CCCCTTSCHHHHH
T ss_pred             HhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc--hhhH----Hhhcc---------CCCCccccCCHHHHH
Confidence            987653   68899999999999999999999865432211  0111    11110         001111233467889


Q ss_pred             HHHHccccCCCCCCCCCccchhhhhhccccc
Q 022858          126 VALWRVQYKPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ++.+||+.||.+||++.++  ++.|+.+...
T Consensus       279 li~~~l~~dp~~Rps~~~l--l~~L~~~~~~  307 (317)
T 2buj_A          279 LLNSMMTVDPHQRPHIPLL--LSQLEALQPP  307 (317)
T ss_dssp             HHHHHTCSSGGGSCCHHHH--HHHHHHTCCC
T ss_pred             HHHHHhhcChhhCCCHHHH--HHHhhhcCCC
Confidence            9999999999999999999  9999887653

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.90  E-value=1.2e-25  Score=211.82  Aligned_cols=133  Identities=20%  Similarity=0.211  Sum_probs=107.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.++.                           ++.|+|||++.+..
T Consensus       439 ~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~  515 (613)
T 2ozo_A          439 AELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK  515 (613)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCC
Confidence            5789999999999999   99999999999999986542                           36799999999889


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++|||||||++|||++ |+.||......        .+...+..+..         ...+..++..+.+++..||+.
T Consensus       516 ~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------~~~~~i~~~~~---------~~~p~~~~~~l~~li~~cl~~  578 (613)
T 2ozo_A          516 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EVMAFIEQGKR---------MECPPECPPELYALMSDCWIY  578 (613)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--------HHHHHHHTTCC---------CCCCTTCCHHHHHHHHHTTCS
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--------HHHHHHHcCCC---------CCCCCcCCHHHHHHHHHHcCC
Confidence            9999999999999999998 99999755422        12222322211         122334557889999999999


Q ss_pred             CCCCCCCCCccchhhhhhccccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ||++||++.++  ++.|+.....
T Consensus       579 dP~~RPs~~~l--~~~L~~~~~~  599 (613)
T 2ozo_A          579 KWEDRPDFLTV--EQRMRACYYS  599 (613)
T ss_dssp             STTTSCCHHHH--HHHHHHHHHH
T ss_pred             ChhHCcCHHHH--HHHHHHHHHH
Confidence            99999999999  9999886543

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.90  E-value=6e-25  Score=197.10  Aligned_cols=130  Identities=22%  Similarity=0.287  Sum_probs=98.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc---CCC-----------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV---KFW-----------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~---~~~-----------------------t~~y~aPE~~~~~~~   55 (291)
                      ..|+.||+.||+|||+   .+|+||||||+|||++.   ++.                       |+.|+|||++.+..+
T Consensus       164 ~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  240 (400)
T 1nxk_A          164 SEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKY  240 (400)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------CTTCCGGGSCCCCS
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCC
Confidence            5689999999999999   99999999999999986   221                       778999999998899


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++|||||||++|||++|..||..............    .+..+.... .     ..........+.+++.+||+.||
T Consensus       241 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~----~i~~~~~~~-~-----~~~~~~~s~~~~~li~~~L~~dP  310 (400)
T 1nxk_A          241 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT----RIRMGQYEF-P-----NPEWSEVSEEVKMLIRNLLKTEP  310 (400)
T ss_dssp             SSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHH----HHHHTCCCC-C-----TTTTTTSCHHHHHHHHTTSCSSG
T ss_pred             CCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHH----HHHcCcccC-C-----CcccccCCHHHHHHHHHHCCCCh
Confidence            9999999999999999999999976554322111111    111111100 0     01112234678899999999999


Q ss_pred             CCCCCCCcc
Q 022858          136 EAMPSMTVR  144 (291)
Q Consensus       136 ~~RPs~~~v  144 (291)
                      ++|||+.++
T Consensus       311 ~~Rpt~~ei  319 (400)
T 1nxk_A          311 TQRMTITEF  319 (400)
T ss_dssp             GGSCCHHHH
T ss_pred             hHCcCHHHH
Confidence            999999999

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.90  E-value=6.5e-25  Score=191.77  Aligned_cols=139  Identities=17%  Similarity=0.162  Sum_probs=103.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC------------------------------------CCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------------------WTPGYA   45 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~------------------------------------~t~~y~   45 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++                                    +|+.|+
T Consensus       108 ~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~  184 (330)
T 2izr_A          108 LMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYM  184 (330)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTC
T ss_pred             HHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCcccc
Confidence            5789999999999999   9999999999999997442                                    167899


Q ss_pred             cCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHH
Q 022858           46 APETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMAL  125 (291)
Q Consensus        46 aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (291)
                      |||++.+..++.++||||||+++|||++|+.||......    ...+ ....+.........     .......+ .+.+
T Consensus       185 aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~----~~~~-~~~~i~~~~~~~~~-----~~~~~~~p-~~~~  253 (330)
T 2izr_A          185 SINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD----TLKE-RYQKIGDTKRATPI-----EVLCENFP-EMAT  253 (330)
T ss_dssp             CHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS----SHHH-HHHHHHHHHHHSCH-----HHHTTTCH-HHHH
T ss_pred             ChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc----cHHH-HHHHHHhhhccCCH-----HHHhccCh-HHHH
Confidence            999999999999999999999999999999999765422    1111 11111110000000     00001123 8899


Q ss_pred             HHHHccccCCCCCCCCCccchhhhhhccccc
Q 022858          126 VALWRVQYKPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ++..|++.||.+||++.++  .+.|+.....
T Consensus       254 li~~~l~~~p~~RP~~~~l--~~~l~~~~~~  282 (330)
T 2izr_A          254 YLRYVRRLDFFEKPDYDYL--RKLFTDLFDR  282 (330)
T ss_dssp             HHHHHHHCCTTCCCCHHHH--HHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCHHHH--HHHHHHHHHH
Confidence            9999999999999999999  8888866543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.90  E-value=2.4e-26  Score=200.52  Aligned_cols=143  Identities=15%  Similarity=0.143  Sum_probs=105.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                           ++.|+|||.+.+..
T Consensus       130 ~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  206 (327)
T 3lxl_A          130 LLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI  206 (327)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCC
Confidence            5788999999999999   99999999999999986542                           45599999999888


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccC-------CCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHH
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARS-------GFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVA  127 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  127 (291)
                      ++.++||||||+++|||++|..|+.......       ...........         .+........+..++..+.+++
T Consensus       207 ~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~li  277 (327)
T 3lxl_A          207 FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLE---------LLEEGQRLPAPPACPAEVHELM  277 (327)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHH---------HHHTTCCCCCCTTCCHHHHHHH
T ss_pred             CChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHH---------HhhcccCCCCCCcccHHHHHHH
Confidence            9999999999999999999999986544210       00001111111         1111122223344557889999


Q ss_pred             HHccccCCCCCCCCCccchhhhhhccccccc
Q 022858          128 LWRVQYKPEAMPSMTVRPAKFMLHGSLASML  158 (291)
Q Consensus       128 ~~cl~~~p~~RPs~~~v~~~~~L~~~~~~~~  158 (291)
                      .+||+.||++||++.++  ++.|+.......
T Consensus       278 ~~~l~~dP~~Rps~~el--l~~L~~~~~~~~  306 (327)
T 3lxl_A          278 KLCWAPSPQDRPSFSAL--GPQLDMLWSGSR  306 (327)
T ss_dssp             HHHTCSSGGGSCCHHHH--HHHHHHC-----
T ss_pred             HHHcCCChhhCcCHHHH--HHHHHHHHhhhc
Confidence            99999999999999999  999998866543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.90  E-value=1.7e-25  Score=192.45  Aligned_cols=134  Identities=22%  Similarity=0.202  Sum_probs=102.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMSF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~~   53 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                            ++.|+|||.+.+.
T Consensus       131 ~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  207 (298)
T 3f66_A          131 IGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ  207 (298)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCC
Confidence            5688999999999999   99999999999999987643                            4579999999988


Q ss_pred             CCccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           54 PVTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      .++.++||||||+++|||++ +.+|+......    ..    ......+..         ...+...+..+.+++.+||+
T Consensus       208 ~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~----~~----~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~  270 (298)
T 3f66_A          208 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DI----TVYLLQGRR---------LLQPEYCPDPLYEVMLKCWH  270 (298)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT----TH----HHHHHTTCC---------CCCCTTCCHHHHHHHHHHTC
T ss_pred             CCChHHHHHHHHHHHHHHHhCCCCCCccCCHH----HH----HHHHhcCCC---------CCCCccCCHHHHHHHHHHcC
Confidence            99999999999999999999 55555433221    11    111111111         11112234578899999999


Q ss_pred             cCCCCCCCCCccchhhhhhcccccc
Q 022858          133 YKPEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       133 ~~p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      .||++||++.++  ++.|+++....
T Consensus       271 ~~p~~Rps~~el--l~~L~~~~~~~  293 (298)
T 3f66_A          271 PKAEMRPSFSEL--VSRISAIFSTF  293 (298)
T ss_dssp             SSGGGSCCHHHH--HHHHHHHHHTS
T ss_pred             CChhhCcCHHHH--HHHHHHHHHhh
Confidence            999999999999  99998876543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.90  E-value=3.2e-25  Score=193.37  Aligned_cols=133  Identities=21%  Similarity=0.171  Sum_probs=98.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                          |+.|+|||++.+..+
T Consensus       108 ~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  184 (323)
T 3tki_A          108 QRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF  184 (323)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSB
T ss_pred             HHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCC
Confidence            5789999999999999   99999999999999987542                          778999999987765


Q ss_pred             -ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 -THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 -~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                       +.++|||||||++|||++|+.||.......      . ....+.....        ...........+.+++.+||+.|
T Consensus       185 ~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~-~~~~~~~~~~--------~~~~~~~~~~~~~~li~~~L~~d  249 (323)
T 3tki_A          185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------Q-EYSDWKEKKT--------YLNPWKKIDSAPLALLHKILVEN  249 (323)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS------H-HHHHHHTTCT--------TSTTGGGSCHHHHHHHHHHSCSS
T ss_pred             CCCcccHHHHHHHHHHHHhCCCCCCCCchHH------H-HHHHHhcccc--------cCCccccCCHHHHHHHHHHccCC
Confidence             788999999999999999999997544220      0 1111111100        00111223466788999999999


Q ss_pred             CCCCCCCCccchhhhhhc
Q 022858          135 PEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~  152 (291)
                      |++|||+.|+....++..
T Consensus       250 P~~R~t~~eil~h~~~~~  267 (323)
T 3tki_A          250 PSARITIPDIKKDRWYNK  267 (323)
T ss_dssp             TTTSCCHHHHTTCTTTTC
T ss_pred             hhhCcCHHHHhhChhhcc
Confidence            999999999933333433

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=9.9e-26  Score=193.03  Aligned_cols=134  Identities=19%  Similarity=0.212  Sum_probs=106.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.++.                           ++.|+|||.+.+..
T Consensus       113 ~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  189 (287)
T 1u59_A          113 AELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK  189 (287)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCC
Confidence            5789999999999999   99999999999999986542                           46799999998888


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++||||||+++|||++ |+.||......        .....+..+..         ...+...+..+.+++..||+.
T Consensus       190 ~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~~i~~~~~---------~~~~~~~~~~l~~li~~~l~~  252 (287)
T 1u59_A          190 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EVMAFIEQGKR---------MECPPECPPELYALMSDCWIY  252 (287)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--------HHHHHHHTTCC---------CCCCTTCCHHHHHHHHHTTCS
T ss_pred             CCchhhHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHhcCCc---------CCCCCCcCHHHHHHHHHHcCC
Confidence            9999999999999999998 99998654321        11222222211         112233456888999999999


Q ss_pred             CCCCCCCCCccchhhhhhcccccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      ||++||++.++  ++.|+......
T Consensus       253 ~p~~Rps~~~l--~~~l~~~~~~~  274 (287)
T 1u59_A          253 KWEDRPDFLTV--EQRMRACYYSL  274 (287)
T ss_dssp             SGGGSCCHHHH--HHHHHHHHHHH
T ss_pred             ChhhCcCHHHH--HHHHHHHHHhc
Confidence            99999999999  99998876543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.90  E-value=1.2e-25  Score=200.04  Aligned_cols=127  Identities=17%  Similarity=0.131  Sum_probs=96.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------CCccccCccccCC--------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------TPGYAAPETWMSF--------   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------t~~y~aPE~~~~~--------   53 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.++.                    ++.|+|||++.+.        
T Consensus       209 ~~i~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~  285 (377)
T 3byv_A          209 LQLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRD  285 (377)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHC
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhccccccccccc
Confidence            4689999999999999   99999999999999997653                    3789999999877        


Q ss_pred             ---CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHc
Q 022858           54 ---PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWR  130 (291)
Q Consensus        54 ---~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c  130 (291)
                         .++.++|||||||++|||++|+.||..........                .+...      ....+..+.+++.+|
T Consensus       286 ~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~----------------~~~~~------~~~~~~~~~~li~~~  343 (377)
T 3byv_A          286 RRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSE----------------WIFRS------CKNIPQPVRALLEGF  343 (377)
T ss_dssp             CEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSG----------------GGGSS------CCCCCHHHHHHHHHH
T ss_pred             ccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchh----------------hhhhh------ccCCCHHHHHHHHHH
Confidence               89999999999999999999999997554321110                01000      012235788899999


Q ss_pred             cccCCCCCCCCCccchhhhhhcc
Q 022858          131 VQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       131 l~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      |+.||++||++.++.....+.+.
T Consensus       344 L~~dp~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          344 LRYPKEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             TCSSGGGCCCHHHHHTSHHHHHH
T ss_pred             cCCCchhCCCHHHHhhChHHHHH
Confidence            99999999999999322344443

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.90  E-value=1.4e-25  Score=201.99  Aligned_cols=118  Identities=20%  Similarity=0.221  Sum_probs=94.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------CCccccCccc----------c
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------TPGYAAPETW----------M   51 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------t~~y~aPE~~----------~   51 (291)
                      +.|+.|++.||+|||+   .+||||||||+|||++.++.                    .+.|+|||++          .
T Consensus       214 ~~i~~qi~~aL~~LH~---~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~  290 (413)
T 3dzo_A          214 LQLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHH  290 (413)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGC
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCcccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhcccccccccc
Confidence            5678999999999999   99999999999999997753                    4789999999          5


Q ss_pred             CCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcc
Q 022858           52 SFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRV  131 (291)
Q Consensus        52 ~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  131 (291)
                      +..++.++|||||||++|||++|+.||..........                .+....      ...+..+.+++.+||
T Consensus       291 ~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~----------------~~~~~~------~~~~~~~~~li~~~l  348 (413)
T 3dzo_A          291 PTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSE----------------WIFRSC------KNIPQPVRALLEGFL  348 (413)
T ss_dssp             CEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSG----------------GGGSSC------CCCCHHHHHHHHHHT
T ss_pred             CcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHH----------------HHHhhc------ccCCHHHHHHHHHHc
Confidence            5568899999999999999999999997654321110                111100      012367889999999


Q ss_pred             ccCCCCCCCCCcc
Q 022858          132 QYKPEAMPSMTVR  144 (291)
Q Consensus       132 ~~~p~~RPs~~~v  144 (291)
                      +.||++||++.++
T Consensus       349 ~~dP~~Rpt~~~~  361 (413)
T 3dzo_A          349 RYPKEDRLLPLQA  361 (413)
T ss_dssp             CSSGGGSCCHHHH
T ss_pred             cCChhhCcCHHHH
Confidence            9999999998888

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.90  E-value=7.4e-25  Score=195.66  Aligned_cols=150  Identities=15%  Similarity=0.115  Sum_probs=98.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------------CCccccCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------------TPGYAAPETW   50 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------------t~~y~aPE~~   50 (291)
                      ..|+.||+.||+|||+   .+|+||||||+|||++.++.                               |+.|+|||++
T Consensus       131 ~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  207 (389)
T 3gni_B          131 AYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVL  207 (389)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHH
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHH
Confidence            4688999999999999   99999999999999986542                               5569999999


Q ss_pred             cC--CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhh-------------------cCccchhhh-
Q 022858           51 MS--FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLE-------------------KGEFQDLII-  108 (291)
Q Consensus        51 ~~--~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~-  108 (291)
                      .+  ..++.++|||||||++|||++|+.||.................+...                   .....+... 
T Consensus       208 ~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (389)
T 3gni_B          208 QQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTT  287 (389)
T ss_dssp             STTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------------------------------
T ss_pred             hccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccccccccccccccccccccccccccc
Confidence            87  57899999999999999999999999764432110000000000000                   000000000 


Q ss_pred             --h------cccccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhccc
Q 022858          109 --V------CGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       109 --~------~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~  154 (291)
                        +      ....+........+.+++.+||+.||++|||+.|+.....+.+..
T Consensus       288 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~  341 (389)
T 3gni_B          288 STPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  341 (389)
T ss_dssp             ------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred             CccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence              0      000011223346788999999999999999999994444465543

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.90  E-value=1.5e-25  Score=195.52  Aligned_cols=133  Identities=23%  Similarity=0.223  Sum_probs=105.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                       ++.|+|||.+.+..++.+
T Consensus       145 ~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  221 (327)
T 1fvr_A          145 LHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTN  221 (327)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHH
T ss_pred             HHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCch
Confidence            5689999999999999   99999999999999986532                       668999999988889999


Q ss_pred             cceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           59 CDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        59 ~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      +||||||+++|||++ |..||......        .....+..+..         ...+......+.+++.+||+.||++
T Consensus       222 ~Di~slG~il~ellt~g~~pf~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~  284 (327)
T 1fvr_A          222 SDVWSYGVLLWEIVSLGGTPYCGMTCA--------ELYEKLPQGYR---------LEKPLNCDDEVYDLMRQCWREKPYE  284 (327)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHGGGTCC---------CCCCTTBCHHHHHHHHHHTCSSGGG
T ss_pred             hcchHHHHHHHHHHcCCCCCCCCCcHH--------HHHHHhhcCCC---------CCCCCCCCHHHHHHHHHHccCChhh
Confidence            999999999999998 99998654321        12222222111         1112233467889999999999999


Q ss_pred             CCCCCccchhhhhhccccc
Q 022858          138 MPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       138 RPs~~~v~~~~~L~~~~~~  156 (291)
                      ||++.++  ++.|+.....
T Consensus       285 Rps~~el--l~~L~~~~~~  301 (327)
T 1fvr_A          285 RPSFAQI--LVSLNRMLEE  301 (327)
T ss_dssp             SCCHHHH--HHHHHHHHHS
T ss_pred             CcCHHHH--HHHHHHHHHh
Confidence            9999999  9988887654

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.90  E-value=1.4e-25  Score=212.05  Aligned_cols=131  Identities=22%  Similarity=0.275  Sum_probs=105.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.|+.||+.||+|||+   .+||||||||+|||++.++.                           ++.|+|||++.+..
T Consensus       472 ~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~  548 (635)
T 4fl3_A          472 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK  548 (635)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCC
Confidence            5789999999999999   99999999999999986642                           46799999999889


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++|||||||++|||++ |+.||......        .+...+..+..         ...+..++..+.+++..||+.
T Consensus       549 ~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------~~~~~i~~~~~---------~~~p~~~~~~l~~li~~cl~~  611 (635)
T 4fl3_A          549 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------EVTAMLEKGER---------MGCPAGCPREMYDLMNLCWTY  611 (635)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCC---------CCCCTTCCHHHHHHHHHHTCS
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCC---------CCCCCCCCHHHHHHHHHHcCC
Confidence            9999999999999999998 99999755431        12223322221         122234457889999999999


Q ss_pred             CCCCCCCCCccchhhhhhccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~  154 (291)
                      ||++||++.++  ++.|+...
T Consensus       612 dP~~RPs~~~l--~~~L~~~~  630 (635)
T 4fl3_A          612 DVENRPGFAAV--ELRLRNYY  630 (635)
T ss_dssp             STTTSCCHHHH--HHHHHHHH
T ss_pred             CHhHCcCHHHH--HHHHHHHH
Confidence            99999999999  99887653

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.90  E-value=2e-25  Score=193.05  Aligned_cols=136  Identities=20%  Similarity=0.209  Sum_probs=98.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.++.                       |+.|+|||++.+..++.+
T Consensus       123 ~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  199 (308)
T 3g33_A          123 KDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATP  199 (308)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCST
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCch
Confidence            5689999999999999   99999999999999986643                       788999999999899999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---Cccchh------hhhcc----cccchHHHHHHHHH
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---GEFQDL------IIVCG----MEKNNKEKAERMAL  125 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------~~~~~----~~~~~~~~~~~~~~  125 (291)
                      +|||||||++|||++|+.||......    .....+......   ..+...      .-+..    ......+....+.+
T Consensus       200 ~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (308)
T 3g33_A          200 VDMWSVGCIFAEMFRRKPLFCGNSEA----DQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQ  275 (308)
T ss_dssp             HHHHHHHHHHHHTTTSSCSCCCSSHH----HHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHH
Confidence            99999999999999999999654422    111111111100   000000      00000    00001123467789


Q ss_pred             HHHHccccCCCCCCCCCcc
Q 022858          126 VALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v  144 (291)
                      ++.+||+.||++|||+.|+
T Consensus       276 li~~~L~~dP~~R~t~~e~  294 (308)
T 3g33_A          276 LLLEMLTFNPHKRISAFRA  294 (308)
T ss_dssp             HHHHHTCSSTTTSCCHHHH
T ss_pred             HHHHHhcCCCccCCCHHHH
Confidence            9999999999999999998

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.90  E-value=1e-25  Score=195.20  Aligned_cols=134  Identities=25%  Similarity=0.255  Sum_probs=104.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.++.                          ++.|+|||++.+..+
T Consensus       151 ~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  227 (316)
T 2xir_A          151 ICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY  227 (316)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccc
Confidence            4688999999999999   99999999999999986532                          557999999998899


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||++ |..||......       .........+...         ..+......+.+++.+||+.|
T Consensus       228 ~~~~Di~slG~il~~l~t~g~~p~~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~d  291 (316)
T 2xir_A          228 TIQSDVWSFGVLLWEIFSLGASPYPGVKID-------EEFCRRLKEGTRM---------RAPDYTTPEMYQTMLDCWHGE  291 (316)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-------HHHHHHHHHTCCC---------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             cchhHHHHHHHHHHHHHhCCCCCCcccchh-------HHHHHHhccCccC---------CCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999998 99998654321       1122222221111         111223467889999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |.+||++.++  ++.|+.+...
T Consensus       292 p~~Rps~~el--l~~L~~~~~~  311 (316)
T 2xir_A          292 PSQRPTFSEL--VEHLGNLLQA  311 (316)
T ss_dssp             GGGSCCHHHH--HHHHHHHHHH
T ss_pred             hhhCcCHHHH--HHHHHHHHhh
Confidence            9999999999  9999887643

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.90  E-value=1.1e-25  Score=190.81  Aligned_cols=130  Identities=25%  Similarity=0.201  Sum_probs=101.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCC---eEeecCCCCcEEEccC--------CC----------------------CCccccCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQ---IIHYNIKPENILLDVK--------FW----------------------TPGYAAPE   48 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~---ivH~Dlkp~NIll~~~--------~~----------------------t~~y~aPE   48 (291)
                      +.++.|++.||+|||+   .+   |+||||||+|||++.+        ..                      ++.|+|||
T Consensus       108 ~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE  184 (271)
T 3dtc_A          108 VNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPE  184 (271)
T ss_dssp             HHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------------CCGGGSCHH
T ss_pred             HHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccccccCCCCccceeCHH
Confidence            5789999999999999   66   9999999999999852        11                      77899999


Q ss_pred             cccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHH
Q 022858           49 TWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVAL  128 (291)
Q Consensus        49 ~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  128 (291)
                      .+.+..++.++||||||+++|||++|+.||......       .... ......        .....+...+..+.+++.
T Consensus       185 ~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~-~~~~~~--------~~~~~~~~~~~~~~~li~  248 (271)
T 3dtc_A          185 VIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL-------AVAY-GVAMNK--------LALPIPSTCPEPFAKLME  248 (271)
T ss_dssp             HHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH-------HHHH-HHHTSC--------CCCCCCTTCCHHHHHHHH
T ss_pred             HhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHH-hhhcCC--------CCCCCCcccCHHHHHHHH
Confidence            999888999999999999999999999999654321       1111 111111        111122233467889999


Q ss_pred             HccccCCCCCCCCCccchhhhhhc
Q 022858          129 WRVQYKPEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       129 ~cl~~~p~~RPs~~~v~~~~~L~~  152 (291)
                      +||+.||++||++.|+  ++.|+.
T Consensus       249 ~~l~~~p~~Rps~~e~--l~~L~~  270 (271)
T 3dtc_A          249 DCWNPDPHSRPSFTNI--LDQLTT  270 (271)
T ss_dssp             HHTCSSGGGSCCHHHH--HHHHHC
T ss_pred             HHhcCCcccCcCHHHH--HHHHhc
Confidence            9999999999999999  998875

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.90  E-value=1.3e-25  Score=191.31  Aligned_cols=133  Identities=25%  Similarity=0.276  Sum_probs=104.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.++.                         ++.|+|||.+.+..++
T Consensus       112 ~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  188 (279)
T 1qpc_A          112 LDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT  188 (279)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEEC
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCC
Confidence            5789999999999999   99999999999999987643                         4579999999888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++|||++ |..||......        .....+..+..         ...+...+..+.+++.+|++.||
T Consensus       189 ~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~~p  251 (279)
T 1qpc_A          189 IKSDVWSFGILLTEIVTHGRIPYPGMTNP--------EVIQNLERGYR---------MVRPDNCPEELYQLMRLCWKERP  251 (279)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             chhhhHHHHHHHHHHHhCCCCCCcccCHH--------HHHHHHhcccC---------CCCcccccHHHHHHHHHHhccCh
Confidence            99999999999999999 89898654321        11222222110         11122334678899999999999


Q ss_pred             CCCCCCCccchhhhhhccccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ++||++.++  ++.|+.....
T Consensus       252 ~~Rps~~~l--~~~l~~~~~~  270 (279)
T 1qpc_A          252 EDRPTFDYL--RSVLEDFFTA  270 (279)
T ss_dssp             GGSCCHHHH--HHHHHHHHHH
T ss_pred             hhCCCHHHH--HHHHHHHHHh
Confidence            999999999  9998877543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.90  E-value=1.3e-25  Score=200.79  Aligned_cols=125  Identities=16%  Similarity=0.153  Sum_probs=92.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-------------------------CCCccccCccccC----
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-------------------------WTPGYAAPETWMS----   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-------------------------~t~~y~aPE~~~~----   52 (291)
                      ..|+.||+.||+|||+   .+|+||||||+|||++...                         +|+.|+|||++.+    
T Consensus       158 ~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  234 (390)
T 2zmd_A          158 KSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSS  234 (390)
T ss_dssp             HHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEESSSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC---
T ss_pred             HHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEECCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhcccc
Confidence            4688999999999999   9999999999999996421                         1788999999865    


Q ss_pred             -------CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHH
Q 022858           53 -------FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMAL  125 (291)
Q Consensus        53 -------~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (291)
                             ..++.++|||||||++|||++|+.||.....      ..........         +......+......+.+
T Consensus       235 ~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~------~~~~~~~~~~---------~~~~~~~~~~~~~~~~~  299 (390)
T 2zmd_A          235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLHAIID---------PNHEIEFPDIPEKDLQD  299 (390)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC------HHHHHHHHHC---------TTSCCCCCCCSCHHHHH
T ss_pred             ccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH------HHHHHHHHhC---------ccccCCCCccchHHHHH
Confidence                   3688999999999999999999999964321      1111111111         11111111112356789


Q ss_pred             HHHHccccCCCCCCCCCcc
Q 022858          126 VALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v  144 (291)
                      ++.+||+.||++||++.|+
T Consensus       300 li~~~L~~dP~~Rps~~el  318 (390)
T 2zmd_A          300 VLKCCLKRDPKQRISIPEL  318 (390)
T ss_dssp             HHHHHTCSSTTTSCCHHHH
T ss_pred             HHHHHcccChhhCCCHHHH
Confidence            9999999999999999999

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.90  E-value=1.4e-25  Score=195.66  Aligned_cols=136  Identities=22%  Similarity=0.178  Sum_probs=105.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------CCccccCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------TPGYAAPETWMS   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------t~~y~aPE~~~~   52 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                             ++.|+|||.+.+
T Consensus       143 ~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  219 (327)
T 2yfx_A          143 LHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME  219 (327)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcC
Confidence            5689999999999999   99999999999999984321                             557999999988


Q ss_pred             CCCccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcc
Q 022858           53 FPVTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRV  131 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  131 (291)
                      ..++.++||||||+++|||++ |..||......        .....+..+..         ...+......+.+++.+||
T Consensus       220 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l  282 (327)
T 2yfx_A          220 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--------EVLEFVTSGGR---------MDPPKNCPGPVYRIMTQCW  282 (327)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHHHHHHTTCC---------CCCCTTCCHHHHHHHHHHT
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--------HHHHHHhcCCC---------CCCCCCCCHHHHHHHHHHh
Confidence            899999999999999999998 88888654321        12222222111         1112233467889999999


Q ss_pred             ccCCCCCCCCCccchhhhhhcccccccc
Q 022858          132 QYKPEAMPSMTVRPAKFMLHGSLASMLN  159 (291)
Q Consensus       132 ~~~p~~RPs~~~v~~~~~L~~~~~~~~~  159 (291)
                      +.||.+||++.++  ++.|+........
T Consensus       283 ~~dp~~Rps~~~l--l~~l~~~~~~~~~  308 (327)
T 2yfx_A          283 QHQPEDRPNFAII--LERIEYCTQDPDV  308 (327)
T ss_dssp             CSSGGGSCCHHHH--HHHHHHHHHCHHH
T ss_pred             cCChhhCcCHHHH--HHHHHHHhcCHHH
Confidence            9999999999999  9999887665433

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.90  E-value=1.9e-25  Score=194.98  Aligned_cols=130  Identities=24%  Similarity=0.277  Sum_probs=89.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCC--eEeecCCCCcEEEccCCC------------------------------------CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQ--IIHYNIKPENILLDVKFW------------------------------------TPG   43 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~--ivH~Dlkp~NIll~~~~~------------------------------------t~~   43 (291)
                      +.|+.||+.||+|||+   .+  |+||||||+|||++.++.                                    ++.
T Consensus       139 ~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~  215 (337)
T 3ll6_A          139 LKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPM  215 (337)
T ss_dssp             HHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-----------------------
T ss_pred             HHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCC
Confidence            5789999999999999   77  999999999999986532                                    456


Q ss_pred             cccCccc---cCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHH
Q 022858           44 YAAPETW---MSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKA  120 (291)
Q Consensus        44 y~aPE~~---~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (291)
                      |+|||++   .+..++.++||||||+++|||++|+.||.......    .       . ....        .........
T Consensus       216 y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----~-------~-~~~~--------~~~~~~~~~  275 (337)
T 3ll6_A          216 YRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR----I-------V-NGKY--------SIPPHDTQY  275 (337)
T ss_dssp             --------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------------------C--------CCCTTCCSS
T ss_pred             cCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH----h-------h-cCcc--------cCCcccccc
Confidence            9999998   45678999999999999999999999986543210    0       0 0000        001111112


Q ss_pred             HHHHHHHHHccccCCCCCCCCCccchhhhhhccccc
Q 022858          121 ERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       121 ~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ..+.+++.+||+.||++||++.|+  ++.|+.....
T Consensus       276 ~~~~~li~~~l~~~p~~Rps~~e~--l~~l~~~~~~  309 (337)
T 3ll6_A          276 TVFHSLIRAMLQVNPEERLSIAEV--VHQLQEIAAA  309 (337)
T ss_dssp             GGGHHHHHHHSCSSGGGSCCHHHH--HHHHHHHHHH
T ss_pred             hHHHHHHHHHccCChhhCcCHHHH--HHHHHHHHhc
Confidence            347789999999999999999999  9999887654

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.90  E-value=1.1e-25  Score=190.36  Aligned_cols=132  Identities=18%  Similarity=0.222  Sum_probs=103.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.++.                         ++.|+|||.+.+..++
T Consensus       107 ~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  183 (267)
T 3t9t_A          107 LGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS  183 (267)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcCCCcc
Confidence            5688999999999999   99999999999999986543                         4579999999888899


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++|||++ |..||......        .....+..+..         ...+......+.+++.+|++.||
T Consensus       184 ~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~i~~~~~---------~~~~~~~~~~l~~li~~~l~~~p  246 (267)
T 3t9t_A          184 SKSDVWSFGVLMWEVFSEGKIPYENRSNS--------EVVEDISTGFR---------LYKPRLASTHVYQIMNHCWRERP  246 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTCC---------CCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             chhchhhhHHHHHHHhccCCCCCCCCCHH--------HHHHHHhcCCc---------CCCCccCcHHHHHHHHHHccCCh
Confidence            99999999999999999 89898654321        11222222111         11112234678899999999999


Q ss_pred             CCCCCCCccchhhhhhcccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ++||++.++  ++.|+++.+
T Consensus       247 ~~Rps~~~l--l~~L~~l~~  264 (267)
T 3t9t_A          247 EDRPAFSRL--LRQLAEIAE  264 (267)
T ss_dssp             GGSCCHHHH--HHHHHHHHH
T ss_pred             hhCcCHHHH--HHHHHHHHh
Confidence            999999999  999987754

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.90  E-value=8.8e-25  Score=187.97  Aligned_cols=137  Identities=23%  Similarity=0.258  Sum_probs=104.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                         |+.|+|||.+.+..++
T Consensus       114 ~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  190 (294)
T 4eqm_A          114 INFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATD  190 (294)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCC
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCC
Confidence            5688999999999999   99999999999999986542                         7889999999998999


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++||||||+++|||++|+.||......       ........ ........     ......+..+.+++.+|++.||.
T Consensus       191 ~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~-~~~~~~~~-----~~~~~~~~~l~~li~~~l~~dp~  257 (294)
T 4eqm_A          191 ECTDIYSIGIVLYEMLVGEPPFNGETAV-------SIAIKHIQ-DSVPNVTT-----DVRKDIPQSLSNVILRATEKDKA  257 (294)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCSSCSSCHH-------HHHHHHHS-SCCCCHHH-----HSCTTSCHHHHHHHHHHSCSSGG
T ss_pred             chHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhh-ccCCCcch-----hcccCCCHHHHHHHHHHhcCCHh
Confidence            9999999999999999999999755421       11111121 11111111     11122346788999999999999


Q ss_pred             CCC-CCCccchhhhhhccccc
Q 022858          137 AMP-SMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       137 ~RP-s~~~v~~~~~L~~~~~~  156 (291)
                      +|| ++.++  .+.|+.....
T Consensus       258 ~R~~~~~~l--~~~l~~~~~~  276 (294)
T 4eqm_A          258 NRYKTIQEM--KDDLSSVLHE  276 (294)
T ss_dssp             GSCSSHHHH--HHHHHTSSSS
T ss_pred             HccccHHHH--HHHHHHHHhh
Confidence            999 67777  7778776544

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.90  E-value=9.4e-26  Score=198.23  Aligned_cols=125  Identities=17%  Similarity=0.141  Sum_probs=93.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-------------------------CCCccccCccccC----
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-------------------------WTPGYAAPETWMS----   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-------------------------~t~~y~aPE~~~~----   52 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.+.                         +|+.|+|||++.+    
T Consensus       111 ~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  187 (343)
T 3dbq_A          111 KSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS  187 (343)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC--
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCcceEEEECCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhcccc
Confidence            4689999999999999   9999999999999996321                         1889999999864    


Q ss_pred             -------CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHH
Q 022858           53 -------FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMAL  125 (291)
Q Consensus        53 -------~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (291)
                             ..++.++|||||||++|||++|+.||.....      .........         ++......+......+.+
T Consensus       188 ~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~~~---------~~~~~~~~~~~~~~~l~~  252 (343)
T 3dbq_A          188 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLHAII---------DPNHEIEFPDIPEKDLQD  252 (343)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHHHHHH---------CTTSCCCCCCCSCHHHHH
T ss_pred             ccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh------HHHHHHHHh---------cCCcccCCcccCCHHHHH
Confidence                   6788999999999999999999999964321      111111111         111111111222356789


Q ss_pred             HHHHccccCCCCCCCCCcc
Q 022858          126 VALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v  144 (291)
                      ++.+||+.||.+|||+.|+
T Consensus       253 li~~~L~~dp~~Rpt~~e~  271 (343)
T 3dbq_A          253 VLKCCLKRDPKQRISIPEL  271 (343)
T ss_dssp             HHHHHTCSSTTTSCCHHHH
T ss_pred             HHHHHcCCChhHCCCHHHH
Confidence            9999999999999999999

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.90  E-value=7.6e-25  Score=190.38  Aligned_cols=148  Identities=15%  Similarity=0.060  Sum_probs=104.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEE----ccCC-----------------------CCCccccCcccc---
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILL----DVKF-----------------------WTPGYAAPETWM---   51 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll----~~~~-----------------------~t~~y~aPE~~~---   51 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||+    +.+.                       +|+.|+|||++.   
T Consensus       115 ~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~  191 (319)
T 4euu_A          115 LIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAV  191 (319)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhcc
Confidence            5689999999999999   999999999999998    4321                       177999999886   


Q ss_pred             -----CCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhh-----------hhcccccc
Q 022858           52 -----SFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLI-----------IVCGMEKN  115 (291)
Q Consensus        52 -----~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~  115 (291)
                           +..++.++|||||||++|||++|+.||...............+...........+.           ........
T Consensus       192 ~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (319)
T 4euu_A          192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSL  271 (319)
T ss_dssp             SCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSS
T ss_pred             ccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCccccc
Confidence                 46789999999999999999999999975443211111111111111110000000           00011233


Q ss_pred             hHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhccc
Q 022858          116 NKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       116 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~  154 (291)
                      .......+.+++.+||+.||++||++.|+  ++......
T Consensus       272 ~~~~~~~l~~ll~~~L~~dP~~R~s~~el--l~h~~d~~  308 (319)
T 4euu_A          272 SRGLQVLLTPVLANILEADQEKCWGFDQF--FAETSDIL  308 (319)
T ss_dssp             CHHHHHHHHHHHHHHSCCCTTTSCCHHHH--HHHHHHHT
T ss_pred             chhHHHHhHHHHHHhccCChhhhccHHHh--hhccHHHh
Confidence            45677888999999999999999999999  87766543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.90  E-value=7e-25  Score=193.33  Aligned_cols=132  Identities=22%  Similarity=0.231  Sum_probs=99.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      ..|+.||+.||+|||+   .+|+||||||+|||++.+..                           |+.|+|||++.+..
T Consensus       133 ~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  209 (351)
T 3c0i_A          133 SHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREP  209 (351)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCC
Confidence            4688999999999999   99999999999999975321                           77899999999989


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++|||||||++|||++|..||.....         .....+..+.....  +    .........+.+++.+||+.|
T Consensus       210 ~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~i~~~~~~~~--~----~~~~~~s~~~~~li~~~L~~d  274 (351)
T 3c0i_A          210 YGKPVDVWGCGVILFILLSGCLPFYGTKE---------RLFEGIIKGKYKMN--P----RQWSHISESAKDLVRRMLMLD  274 (351)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCSSCSSHH---------HHHHHHHHTCCCCC--H----HHHTTSCHHHHHHHHHHTCSS
T ss_pred             CCchHhhHHHHHHHHHHHHCCCCCCCcHH---------HHHHHHHcCCCCCC--c----cccccCCHHHHHHHHHHCCCC
Confidence            99999999999999999999999975421         12222222211100  0    001123467889999999999


Q ss_pred             CCCCCCCCccchhhhhh
Q 022858          135 PEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~  151 (291)
                      |++||++.++.....+.
T Consensus       275 P~~R~s~~e~l~hp~~~  291 (351)
T 3c0i_A          275 PAERITVYEALNHPWLK  291 (351)
T ss_dssp             TTTSCCHHHHHTSHHHH
T ss_pred             hhHCcCHHHHhcChhhc
Confidence            99999999993333444

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.90  E-value=1.6e-25  Score=208.00  Aligned_cols=133  Identities=24%  Similarity=0.257  Sum_probs=106.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.|+.||+.||+|||+   ++|+||||||+|||++.++.                         ++.|+|||.+.+..++
T Consensus       366 ~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  442 (535)
T 2h8h_A          366 VDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT  442 (535)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCC
Confidence            5789999999999999   99999999999999986532                         4579999999988999


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++|||||||++|||++ |+.||......        .+...+..+.         ....+..+...+.+|+.+||+.||
T Consensus       443 ~~sDvwSlGv~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~---------~~~~~~~~~~~l~~li~~cl~~dP  505 (535)
T 2h8h_A          443 IKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGY---------RMPCPPECPESLHDLMCQCWRKEP  505 (535)
T ss_dssp             HHHHHHHHHHHHHHHTTTTCCSSTTCCHH--------HHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCC---------CCCCCCCCCHHHHHHHHHHcCCCh
Confidence            99999999999999999 89998654321        1222222221         111223445678899999999999


Q ss_pred             CCCCCCCccchhhhhhccccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ++||++.++  ++.|+.....
T Consensus       506 ~~RPt~~~l--~~~L~~~~~~  524 (535)
T 2h8h_A          506 EERPTFEYL--QAFLEDYFTS  524 (535)
T ss_dssp             GGSCCHHHH--HHHHHTSSCC
T ss_pred             hHCcCHHHH--HHHHHHHhhc
Confidence            999999999  9999887543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.90  E-value=1.6e-25  Score=191.58  Aligned_cols=133  Identities=20%  Similarity=0.222  Sum_probs=104.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.|+.|++.||+|||+   .+|+||||||+||+++.++.                         ++.|+|||.+.+..++
T Consensus       114 ~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  190 (288)
T 3kfa_A          114 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS  190 (288)
T ss_dssp             HHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCC
Confidence            5688999999999999   99999999999999986543                         5579999999988999


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++|+|++ |..||......        .........         .....+...+..+.+++.+|++.||
T Consensus       191 ~~~Di~slG~il~~ll~~g~~p~~~~~~~--------~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp  253 (288)
T 3kfa_A          191 IKSDVWAFGVLLWEIATYGMSPYPGIDLS--------QVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNP  253 (288)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------GHHHHHHTT---------CCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHhcc---------CCCCCCCCCCHHHHHHHHHHhCCCh
Confidence            99999999999999999 99998654322        111112111         1111222334678899999999999


Q ss_pred             CCCCCCCccchhhhhhccccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      .+||++.++  ++.|+.....
T Consensus       254 ~~Rps~~~~--~~~l~~~~~~  272 (288)
T 3kfa_A          254 SDRPSFAEI--HQAFETMFQE  272 (288)
T ss_dssp             GGSCCHHHH--HHHHHHHHHH
T ss_pred             hhCcCHHHH--HHHHHHHHHh
Confidence            999999999  9988876543

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.90  E-value=9.8e-25  Score=190.05  Aligned_cols=125  Identities=20%  Similarity=0.252  Sum_probs=97.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||++.+..++.
T Consensus       144 ~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  220 (321)
T 2c30_A          144 ATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYAT  220 (321)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCc
Confidence            5789999999999999   99999999999999986543                        77899999999989999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|+.||......        .....+........       .........+.+++.+||+.||++
T Consensus       221 ~~Dv~slG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~  285 (321)
T 2c30_A          221 EVDIWSLGIMVIEMVDGEPPYFSDSPV--------QAMKRLRDSPPPKL-------KNSHKVSPVLRDFLERMLVRDPQE  285 (321)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHSSCCCC-------TTGGGSCHHHHHHHHHHSCSSTTT
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCCCCCc-------CccccCCHHHHHHHHHHccCChhh
Confidence            999999999999999999998654321        11112211111111       111223456888999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       286 Rps~~el  292 (321)
T 2c30_A          286 RATAQEL  292 (321)
T ss_dssp             SCCHHHH
T ss_pred             CcCHHHH
Confidence            9999999

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.90  E-value=4.4e-25  Score=189.97  Aligned_cols=124  Identities=22%  Similarity=0.259  Sum_probs=95.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCC---
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFP---   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~---   54 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||.+.+..   
T Consensus       140 ~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  216 (298)
T 2zv2_A          140 RFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIF  216 (298)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCE
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCC
Confidence            4688999999999999   99999999999999986643                        77899999988754   


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||||+++|||++|+.||......        .....+......        .+........+.+++.+||+.|
T Consensus       217 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~d  280 (298)
T 2zv2_A          217 SGKALDVWAMGVTLYCFVFGQCPFMDERIM--------CLHSKIKSQALE--------FPDQPDIAEDLKDLITRMLDKN  280 (298)
T ss_dssp             ESHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCC--------CCSSSCCCHHHHHHHHHHTCSC
T ss_pred             CCchhhhHhHHHHHHHHHHCCCCCCCccHH--------HHHHHHhcccCC--------CCCccccCHHHHHHHHHHhhcC
Confidence            477899999999999999999998654321        111222111110        0111123467889999999999


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |++||++.|+
T Consensus       281 p~~R~s~~e~  290 (298)
T 2zv2_A          281 PESRIVVPEI  290 (298)
T ss_dssp             TTTSCCHHHH
T ss_pred             hhhCCCHHHH
Confidence            9999999988

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.90  E-value=2.8e-25  Score=195.84  Aligned_cols=144  Identities=15%  Similarity=0.139  Sum_probs=106.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC--C-------------------------------CCccccCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--W-------------------------------TPGYAAPE   48 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~--~-------------------------------t~~y~aPE   48 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.++  .                               |+.|+|||
T Consensus       162 ~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  238 (352)
T 2jii_A          162 LQVACRLLDALEFLHE---NEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMD  238 (352)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHH
T ss_pred             HHHHHHHHHHHHHHHh---CCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHH
Confidence            5789999999999999   9999999999999998764  1                               66899999


Q ss_pred             cccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHH
Q 022858           49 TWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVAL  128 (291)
Q Consensus        49 ~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  128 (291)
                      .+.+..++.++||||||+++|||++|+.||.......  ..+.. ....... ....+....   ......+..+.+++.
T Consensus       239 ~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~~~~-~~~~~~~-~~~~~~~~~---~~~~~~~~~l~~li~  311 (352)
T 2jii_A          239 LHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT--EDIMK-QKQKFVD-KPGPFVGPC---GHWIRPSETLQKYLK  311 (352)
T ss_dssp             HHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH--HHHHH-HHHHHHH-SCCCEECTT---SCEECCCHHHHHHHH
T ss_pred             HHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH--HHHHH-HHHhccC-Chhhhhhhc---cccCCCcHHHHHHHH
Confidence            9999899999999999999999999999997654210  00111 1111111 111111110   000112367889999


Q ss_pred             HccccCCCCCCCCCccchhhhhhcccccc
Q 022858          129 WRVQYKPEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       129 ~cl~~~p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      +||+.||++||++.++  ++.|+++....
T Consensus       312 ~~l~~dp~~Rps~~~l--~~~L~~~~~~~  338 (352)
T 2jii_A          312 VVMALTYEEKPPYAML--RNNLEALLQDL  338 (352)
T ss_dssp             HHHTCCTTCCCCHHHH--HHHHHHHHHHT
T ss_pred             HHHhCChhhCCCHHHH--HHHHHHHHHhc
Confidence            9999999999999999  99998876543

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.90  E-value=8e-25  Score=191.75  Aligned_cols=144  Identities=21%  Similarity=0.150  Sum_probs=104.2

Q ss_pred             hhHHHHHHHHHHHHh--------cCCCCCeEeecCCCCcEEEccCCC----------------------------CCccc
Q 022858            2 HIIAIGTAEGIVSLH--------DGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYA   45 (291)
Q Consensus         2 l~i~~~ia~gL~ylH--------~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~   45 (291)
                      +.++.|++.||+|||        +   .+|+||||||+|||++.++.                            ++.|+
T Consensus       142 ~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~  218 (342)
T 1b6c_B          142 IKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM  218 (342)
T ss_dssp             HHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccC
Confidence            578999999999999        6   89999999999999986543                            67899


Q ss_pred             cCccccCC------CCccccceechhHHHHHHhhC----------CCccccccccCCCCchhHHHHHHhhcCccchhhhh
Q 022858           46 APETWMSF------PVTHKCDVRSFGMLLFEILGR----------RRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIV  109 (291)
Q Consensus        46 aPE~~~~~------~~~~~~Dv~s~G~~l~elltg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (291)
                      |||.+.+.      .++.++||||||+++|||++|          ..||........   .................+..
T Consensus       219 aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  295 (342)
T 1b6c_B          219 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP---SVEEMRKVVCEQKLRPNIPN  295 (342)
T ss_dssp             CHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC---CHHHHHHHHTTSCCCCCCCG
T ss_pred             CHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcc---cHHHHHHHHHHHHhCCCCcc
Confidence            99998865      344789999999999999999          566654432111   11222222222111111000


Q ss_pred             cccccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhccccc
Q 022858          110 CGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       110 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                         .....++...+.+++.+||+.||++||++.++  ++.|+.+...
T Consensus       296 ---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i--~~~L~~i~~~  337 (342)
T 1b6c_B          296 ---RWQSCEALRVMAKIMRECWYANGAARLTALRI--KKTLSQLSQQ  337 (342)
T ss_dssp             ---GGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHH--HHHHHHHHHT
T ss_pred             ---cccchhHHHHHHHHHHHHhccChhhCCCHHHH--HHHHHHHHHH
Confidence               01123567889999999999999999999999  9999887543

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.90  E-value=6.1e-25  Score=187.40  Aligned_cols=130  Identities=21%  Similarity=0.201  Sum_probs=102.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                       ++.|+|||.+.+..++.+
T Consensus       125 ~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  201 (284)
T 2a19_B          125 LELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKE  201 (284)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTH
T ss_pred             HHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCEEECcchhheeccccccccccCCcccccChhhhccCCCcch
Confidence            5689999999999999   99999999999999986532                       778999999998889999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +||||||+++|||++|..|+.....          .......+.+..            .....+.+++.+||+.||.+|
T Consensus       202 ~Di~slG~il~~l~~~~~~~~~~~~----------~~~~~~~~~~~~------------~~~~~~~~li~~~l~~dp~~R  259 (284)
T 2a19_B          202 VDLYALGLILAELLHVCDTAFETSK----------FFTDLRDGIISD------------IFDKKEKTLLQKLLSKKPEDR  259 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCSSHHHHHH----------HHHHHHTTCCCT------------TSCHHHHHHHHHHTCSSGGGS
T ss_pred             hhhHHHHHHHHHHHhcCCcchhHHH----------HHHHhhcccccc------------cCCHHHHHHHHHHccCChhhC
Confidence            9999999999999999988753221          112222222111            123457889999999999999


Q ss_pred             CCCCccchhhhhhccccccc
Q 022858          139 PSMTVRPAKFMLHGSLASML  158 (291)
Q Consensus       139 Ps~~~v~~~~~L~~~~~~~~  158 (291)
                      |++.++  ++.|......+.
T Consensus       260 ps~~e~--l~~l~~~~~~~~  277 (284)
T 2a19_B          260 PNTSEI--LRTLTVWKKSPE  277 (284)
T ss_dssp             CCHHHH--HHHHHHHTC---
T ss_pred             cCHHHH--HHHHHHHhhCCC
Confidence            999999  999988766543

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.90  E-value=4.4e-25  Score=202.15  Aligned_cols=139  Identities=17%  Similarity=0.213  Sum_probs=103.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEc---cCCC-------------------------------CCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD---VKFW-------------------------------TPGYAAP   47 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~---~~~~-------------------------------t~~y~aP   47 (291)
                      +.|+.||+.||+|||+   .+||||||||+|||++   .++.                               |+.|+||
T Consensus       106 ~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP  182 (483)
T 3sv0_A          106 LMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASV  182 (483)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCH
T ss_pred             HHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCH
Confidence            5789999999999999   9999999999999993   3221                               6689999


Q ss_pred             ccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHH
Q 022858           48 ETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVA  127 (291)
Q Consensus        48 E~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  127 (291)
                      |.+.+..++.++|||||||++|||++|+.||.......    ... ....+....+...+.     .....++..+.+++
T Consensus       183 E~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~----~~~-~~~~i~~~~~~~~~~-----~l~~~~p~~l~~li  252 (483)
T 3sv0_A          183 NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT----KKQ-KYEKISEKKVATSIE-----ALCRGYPTEFASYF  252 (483)
T ss_dssp             HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS----HHH-HHHHHHHHHHHSCHH-----HHHTTSCHHHHHHH
T ss_pred             HHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh----HHH-HHHHHhhccccccHH-----HHhcCCcHHHHHHH
Confidence            99999999999999999999999999999997654321    111 111111100000000     01112346789999


Q ss_pred             HHccccCCCCCCCCCccchhhhhhcccc
Q 022858          128 LWRVQYKPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       128 ~~cl~~~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ..||+.+|++||++.+|  ++.|+.+..
T Consensus       253 ~~cl~~dP~~RPs~~el--~~~L~~l~~  278 (483)
T 3sv0_A          253 HYCRSLRFDDKPDYSYL--KRLFRDLFI  278 (483)
T ss_dssp             HHHHTCCTTCCCCHHHH--HHHHHHHHH
T ss_pred             HHHhcCChhhCcCHHHH--HHHHHHHHH
Confidence            99999999999999999  888877643

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.90  E-value=1.4e-25  Score=192.06  Aligned_cols=134  Identities=20%  Similarity=0.282  Sum_probs=103.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.++.                           ++.|+|||.+.+..
T Consensus       124 ~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  200 (291)
T 1u46_A          124 SRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT  200 (291)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCC
Confidence            5688999999999999   99999999999999986542                           44799999998888


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++||||||+++|||++ |..||......       . ....+.....        ....+...+..+.+++.+||+.
T Consensus       201 ~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~-~~~~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~  264 (291)
T 1u46_A          201 FSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-------Q-ILHKIDKEGE--------RLPRPEDCPQDIYNVMVQCWAH  264 (291)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------H-HHHHHHTSCC--------CCCCCTTCCHHHHHHHHHHTCS
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCcccCCHH-------H-HHHHHHccCC--------CCCCCcCcCHHHHHHHHHHccC
Confidence            9999999999999999999 99998654321       1 1111111110        0111223456788999999999


Q ss_pred             CCCCCCCCCccchhhhhhccccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ||++||++.++  ++.|++....
T Consensus       265 ~p~~Rps~~~l--~~~l~~~~~~  285 (291)
T 1u46_A          265 KPEDRPTFVAL--RDFLLEAQPT  285 (291)
T ss_dssp             SGGGSCCHHHH--HHHHHHHC--
T ss_pred             CcccCcCHHHH--HHHHHHhCcc
Confidence            99999999999  9998877543

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.90  E-value=1.3e-24  Score=190.46  Aligned_cols=131  Identities=20%  Similarity=0.157  Sum_probs=100.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCC-cc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPV-TH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~-~~   57 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                       |+.|+|||.+.+..+ +.
T Consensus       111 ~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  187 (336)
T 3h4j_B          111 RRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGP  187 (336)
T ss_dssp             HHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCH
T ss_pred             HHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCC
Confidence            4689999999999999   99999999999999997643                       789999999988765 68


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|..||...........        +..+.          ...+......+.+++.+||+.||.+
T Consensus       188 ~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~--------i~~~~----------~~~p~~~s~~~~~li~~~L~~dP~~  249 (336)
T 3h4j_B          188 EVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK--------VNSCV----------YVMPDFLSPGAQSLIRRMIVADPMQ  249 (336)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCC--------CCSSC----------CCCCTTSCHHHHHHHHTTSCSSGGG
T ss_pred             ccchhHHHHHHHHHHhCCCCCCCccHHHHHHH--------HHcCC----------CCCcccCCHHHHHHHHHHcCCChhH
Confidence            99999999999999999999976543211100        00000          0111123456789999999999999


Q ss_pred             CCCCCccchhhhhhcc
Q 022858          138 MPSMTVRPAKFMLHGS  153 (291)
Q Consensus       138 RPs~~~v~~~~~L~~~  153 (291)
                      |||+.|+....++...
T Consensus       250 Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          250 RITIQEIRRDPWFNVN  265 (336)
T ss_dssp             SCCHHHHTTCHHHHTT
T ss_pred             CcCHHHHHhChhhccC
Confidence            9999999555555543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.90  E-value=5e-25  Score=192.51  Aligned_cols=129  Identities=18%  Similarity=0.245  Sum_probs=99.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCc-c
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVT-H   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~-~   57 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                       |+.|+|||.+.+..++ .
T Consensus       117 ~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  193 (328)
T 3fe3_A          117 RSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGP  193 (328)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSH
T ss_pred             HHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCc
Confidence            4688999999999999   99999999999999987643                       7889999999887765 7


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||+||++|||++|+.||......        .....+..+..          ..+......+.+++.+||+.||.+
T Consensus       194 ~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~~~~----------~~p~~~s~~~~~li~~~L~~dP~~  255 (328)
T 3fe3_A          194 EVDVWSLGVILYTLVSGSLPFDGQNLK--------ELRERVLRGKY----------RIPFYMSTDCENLLKRFLVLNPIK  255 (328)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC----------CCCTTSCHHHHHHHHHHCCSSTTT
T ss_pred             hhhhhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCC----------CCCCCCCHHHHHHHHHHCCCChhH
Confidence            899999999999999999999755321        12222222211          111123456788999999999999


Q ss_pred             CCCCCccchhhhhh
Q 022858          138 MPSMTVRPAKFMLH  151 (291)
Q Consensus       138 RPs~~~v~~~~~L~  151 (291)
                      |||+.|+....++.
T Consensus       256 R~t~~eil~h~~~~  269 (328)
T 3fe3_A          256 RGTLEQIMKDRWIN  269 (328)
T ss_dssp             SCCHHHHTTCTTTT
T ss_pred             CcCHHHHhcCHhhc
Confidence            99999993333444

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.90  E-value=1.2e-24  Score=192.19  Aligned_cols=78  Identities=28%  Similarity=0.395  Sum_probs=70.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc-------------------------CCC----------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV-------------------------KFW----------------   40 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~-------------------------~~~----------------   40 (291)
                      ..|+.||+.||+|||+   .+|+||||||+|||++.                         +..                
T Consensus       140 ~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~  216 (360)
T 3llt_A          140 KLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH  216 (360)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC
T ss_pred             HHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC
Confidence            4688999999999999   99999999999999974                         211                


Q ss_pred             -----CCccccCccccCCCCccccceechhHHHHHHhhCCCcccccc
Q 022858           41 -----TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        41 -----t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                           |+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       217 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  263 (360)
T 3llt_A          217 GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE  263 (360)
T ss_dssp             CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc
Confidence                 788999999999999999999999999999999999996543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.90  E-value=6e-25  Score=190.54  Aligned_cols=136  Identities=15%  Similarity=0.188  Sum_probs=97.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||++.+ ..++
T Consensus       122 ~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  198 (311)
T 3niz_A          122 KIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS  198 (311)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCC
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCC
Confidence            4688999999999999   99999999999999986643                        778999999876 5689


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCc---cchh-------------hhhcccccchHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGE---FQDL-------------IIVCGMEKNNKEKA  120 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------~~~~~~~~~~~~~~  120 (291)
                      .++||||+||++|||++|+.||.......    ....+........   +...             ..............
T Consensus       199 ~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (311)
T 3niz_A          199 TSVDIWSIGCIFAEMITGKPLFPGVTDDD----QLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFC  274 (311)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSTTT----HHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCC
T ss_pred             chHHhHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccC
Confidence            99999999999999999999997654321    1111211111100   0000             00000000011223


Q ss_pred             HHHHHHHHHccccCCCCCCCCCcc
Q 022858          121 ERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       121 ~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ..+.+++.+||+.||++|||+.|+
T Consensus       275 ~~~~~li~~~L~~dP~~Rpt~~el  298 (311)
T 3niz_A          275 QEGIDLLSNMLCFDPNKRISARDA  298 (311)
T ss_dssp             HHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred             HHHHHHHHHHcCCChhHCCCHHHH
Confidence            567899999999999999999999

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.90  E-value=3.4e-25  Score=188.66  Aligned_cols=130  Identities=22%  Similarity=0.243  Sum_probs=100.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCC-----eEeecCCCCcEEEccCCC------------------------CCccccCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQ-----IIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~-----ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~   52 (291)
                      +.|+.|++.||+|||+   .+     |+||||||+||+++.++.                        ++.|+|||.+.+
T Consensus       114 ~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  190 (279)
T 2w5a_A          114 LRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNR  190 (279)
T ss_dssp             HHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHC
T ss_pred             HHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccccccccCCCccccChHHhcc
Confidence            5789999999999999   67     999999999999997653                        778999999998


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++||||||+++|||++|..||.....        ......+..+...         ..+......+.+++.+||+
T Consensus       191 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~i~~~~~~---------~~~~~~~~~l~~li~~~l~  253 (279)
T 2w5a_A          191 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--------KELAGKIREGKFR---------RIPYRYSDELNEIITRMLN  253 (279)
T ss_dssp             C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCC---------CCCTTSCHHHHHHHHHHTC
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCcccCH--------HHHHHHHhhcccc---------cCCcccCHHHHHHHHHHcC
Confidence            8999999999999999999999999865432        1122222222221         1112334678899999999


Q ss_pred             cCCCCCCCCCccchhhhhhcc
Q 022858          133 YKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       133 ~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      .||++||++.++  ++.+...
T Consensus       254 ~~p~~Rps~~~l--l~~~~~~  272 (279)
T 2w5a_A          254 LKDYHRPSVEEI--LENPLIL  272 (279)
T ss_dssp             SSGGGSCCHHHH--HTSTTCC
T ss_pred             CCcccCCCHHHH--HhChhhh
Confidence            999999999999  7765444

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.90  E-value=4.9e-26  Score=196.08  Aligned_cols=139  Identities=17%  Similarity=0.129  Sum_probs=103.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                           |..|+|||.+.+..
T Consensus       129 ~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  205 (302)
T 4e5w_A          129 LKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSK  205 (302)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCC
Confidence            5689999999999999   99999999999999976542                           44599999999889


Q ss_pred             CccccceechhHHHHHHhhCCCcccccccc-------CCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHH
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKAR-------SGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVA  127 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  127 (291)
                      ++.++||||||+++|||++|..|+......       ...............         .......+...+..+.+++
T Consensus       206 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~li  276 (302)
T 4e5w_A          206 FYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK---------EGKRLPCPPNCPDEVYQLM  276 (302)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH---------TTCCCCCCTTCCHHHHHHH
T ss_pred             CCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh---------ccCCCCCCCCCCHHHHHHH
Confidence            999999999999999999999986533211       000000111111111         1111222334457889999


Q ss_pred             HHccccCCCCCCCCCccchhhhhhccc
Q 022858          128 LWRVQYKPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       128 ~~cl~~~p~~RPs~~~v~~~~~L~~~~  154 (291)
                      .+||+.||.+|||+.++  ++.|+.+.
T Consensus       277 ~~~l~~dp~~Rps~~~l--l~~L~~ll  301 (302)
T 4e5w_A          277 RKCWEFQPSNRTSFQNL--IEGFEALL  301 (302)
T ss_dssp             HHTTCSSGGGSCCHHHH--HHHHHHHH
T ss_pred             HHHcCCCCCCCCCHHHH--HHHHHHHh
Confidence            99999999999999999  99987653

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.90  E-value=4.3e-24  Score=186.43  Aligned_cols=143  Identities=20%  Similarity=0.243  Sum_probs=101.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccC-------------------CC---------------------C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK-------------------FW---------------------T   41 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~-------------------~~---------------------t   41 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.+                   ..                     |
T Consensus       121 ~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt  197 (339)
T 1z57_A          121 RKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVST  197 (339)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCCCSSCSC
T ss_pred             HHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccccccccCC
Confidence            4689999999999999   999999999999999762                   11                     7


Q ss_pred             CccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhh--------------
Q 022858           42 PGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLI--------------  107 (291)
Q Consensus        42 ~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------  107 (291)
                      +.|+|||++.+..++.++||||||+++|||++|..||.......    ....+....  +......              
T Consensus       198 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~----~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~  271 (339)
T 1z57_A          198 RHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE----HLAMMERIL--GPLPKHMIQKTRKRKYFHHDR  271 (339)
T ss_dssp             GGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH----HHHHHHHHH--CSCCHHHHHHCSCGGGEETTE
T ss_pred             ccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHh--CCCCHHHHhhccchhHHhhcc
Confidence            78999999999899999999999999999999999997543210    001010000  0000000              


Q ss_pred             -------------hh-----cccccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          108 -------------IV-----CGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       108 -------------~~-----~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                                   ..     .............+.+++.+||+.||.+|||+.|+.....++..
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          272 LDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             ECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             ccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence                         00     00011123456788999999999999999999999333445443

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.90  E-value=1.5e-24  Score=198.04  Aligned_cols=144  Identities=21%  Similarity=0.221  Sum_probs=101.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                       |+.|+|||++.+..++.+
T Consensus       167 ~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  243 (464)
T 3ttj_A          167 SYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN  243 (464)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTT
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHH
Confidence            4688999999999999   99999999999999997643                       788999999999999999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHH-------------------hhcC------ccchhhhhcc--
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKK-------------------LEKG------EFQDLIIVCG--  111 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~-------------------~~~~------~~~~~~~~~~--  111 (291)
                      +||||+||++|||++|+.||.+.....    ....+...                   ....      .+........  
T Consensus       244 ~DiwSlG~il~ell~g~~pF~g~~~~~----~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (464)
T 3ttj_A          244 VDIWSVGCIMGEMVRHKILFPGRDYID----QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFP  319 (464)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSC
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccc
Confidence            999999999999999999997543210    00000000                   0000      0000000000  


Q ss_pred             -cccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhc
Q 022858          112 -MEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       112 -~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~  152 (291)
                       ...........+.+|+.+||+.||++|||+.|+.....+..
T Consensus       320 ~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          320 ADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             cccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence             00111223567899999999999999999999944444543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.90  E-value=1.6e-24  Score=187.49  Aligned_cols=137  Identities=21%  Similarity=0.294  Sum_probs=105.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.++.                        ++.|+|||.+.+..++.
T Consensus       139 ~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  215 (310)
T 2wqm_A          139 WKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF  215 (310)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC------------------CCSSCCHHHHTTCCCCH
T ss_pred             HHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCc
Confidence            5789999999999999   99999999999999986643                        67899999999989999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|..||......      .......+........        ........+.+++.+||+.||++
T Consensus       216 ~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~--------~~~~~~~~l~~li~~~l~~dp~~  281 (310)
T 2wqm_A          216 KSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIEQCDYPPL--------PSDHYSEELRQLVNMCINPDPEK  281 (310)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTC---CC------HHHHHHHHHTTCSCCC--------CTTTSCHHHHHHHHHHTCSSGGG
T ss_pred             hhhHHHHHHHHHHHHhCCCCCcccchh------HHHHHHHhhcccCCCC--------cccccCHHHHHHHHHHcCCChhh
Confidence            999999999999999999998654321      1112222222222111        11123467889999999999999


Q ss_pred             CCCCCccchhhhhhcccccc
Q 022858          138 MPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       138 RPs~~~v~~~~~L~~~~~~~  157 (291)
                      ||++.++  ++.|+++....
T Consensus       282 Rps~~~i--l~~l~~l~~~~  299 (310)
T 2wqm_A          282 RPDVTYV--YDVAKRMHACT  299 (310)
T ss_dssp             SCCHHHH--HHHHHHHHHHH
T ss_pred             CCCHHHH--HHHHHHHHHhh
Confidence            9999999  99998886654

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.90  E-value=1.6e-24  Score=185.58  Aligned_cols=136  Identities=17%  Similarity=0.210  Sum_probs=96.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||++.+. .++
T Consensus       103 ~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  179 (288)
T 1ob3_A          103 KSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS  179 (288)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCC
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccccccccccCchheeCCCCCC
Confidence            4688999999999999   99999999999999987643                        7789999998764 589


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC---ccchhh-----hhc-------ccccchHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG---EFQDLI-----IVC-------GMEKNNKEKAE  121 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~-------~~~~~~~~~~~  121 (291)
                      .++||||+||++|||++|..||......    .....+.......   ......     ++.       ...........
T Consensus       180 ~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (288)
T 1ob3_A          180 TTIDIWSVGCIFAEMVNGTPLFPGVSEA----DQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDE  255 (288)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCH
Confidence            9999999999999999999999654321    0111111111000   000000     000       00001112346


Q ss_pred             HHHHHHHHccccCCCCCCCCCcc
Q 022858          122 RMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       122 ~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .+.+++.+||+.||++|||+.|+
T Consensus       256 ~~~~li~~~L~~dP~~Rpt~~e~  278 (288)
T 1ob3_A          256 SGIDLLSKMLKLDPNQRITAKQA  278 (288)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             HHHHHHHHHcCCCcccCCCHHHH
Confidence            77899999999999999999998

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.90  E-value=1.6e-24  Score=187.68  Aligned_cols=126  Identities=20%  Similarity=0.261  Sum_probs=97.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                           ++.|+|||++.+..
T Consensus       119 ~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  195 (311)
T 3ork_A          119 IEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS  195 (311)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCC
Confidence            5789999999999999   99999999999999986542                           77899999999999


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||||+++|||++|+.||......       .................       ....+..+.+++.+||+.|
T Consensus       196 ~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~d  261 (311)
T 3ork_A          196 VDARSDVYSLGCVLYEVLTGEPPFTGDSPV-------SVAYQHVREDPIPPSAR-------HEGLSADLDAVVLKALAKN  261 (311)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHCCCCCHHHH-------STTCCHHHHHHHHHHTCSS
T ss_pred             CCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhcCCCCCcccc-------cCCCCHHHHHHHHHHHhcC
Confidence            999999999999999999999999654421       11222222211111100       1123467889999999999


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |++||++.++
T Consensus       262 P~~R~~~~~~  271 (311)
T 3ork_A          262 PENRYQTAAE  271 (311)
T ss_dssp             GGGSCSSHHH
T ss_pred             HhhChhhHHH
Confidence            9999998776

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.90  E-value=4.3e-24  Score=187.71  Aligned_cols=144  Identities=20%  Similarity=0.263  Sum_probs=102.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc-------------------CCC---------------------C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV-------------------KFW---------------------T   41 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~-------------------~~~---------------------t   41 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.                   +..                     |
T Consensus       126 ~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt  202 (355)
T 2eu9_A          126 RHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVAT  202 (355)
T ss_dssp             HHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSC
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccccccCCcCC
Confidence            5689999999999999   99999999999999932                   211                     7


Q ss_pred             CccccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhh--------------
Q 022858           42 PGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLI--------------  107 (291)
Q Consensus        42 ~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------  107 (291)
                      +.|+|||++.+..++.++|||||||++|||++|..||.......    ....+....  +......              
T Consensus       203 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~----~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~  276 (355)
T 2eu9_A          203 RHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE----HLVMMEKIL--GPIPSHMIHRTRKQKYFYKGG  276 (355)
T ss_dssp             GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHH--CCCCHHHHHHCSCGGGEETTE
T ss_pred             CcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHc--CCCcHHHhhhccchhhhcccc
Confidence            88999999999899999999999999999999999997543210    011111100  0000000              


Q ss_pred             -------------hh-----cccccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhccc
Q 022858          108 -------------IV-----CGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       108 -------------~~-----~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~  154 (291)
                                   ..     .............+.+++.+||+.||++|||+.|+.....+.+..
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          277 LVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT  341 (355)
T ss_dssp             ECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred             cccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence                         00     000111223456788999999999999999999994445565543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=1e-24  Score=190.04  Aligned_cols=133  Identities=20%  Similarity=0.202  Sum_probs=100.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc--CCC-----------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV--KFW-----------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~--~~~-----------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.  ++.                       |+.|+|||++.+..++
T Consensus       105 ~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  181 (321)
T 1tki_A          105 VSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVS  181 (321)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEEC
T ss_pred             HHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCC
Confidence            5689999999999999   99999999999999986  221                       7789999999988899


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++||||||+++|||++|..||......        .....+..+.....      .......+..+.+++.+|++.||.
T Consensus       182 ~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~~------~~~~~~~s~~~~~li~~~L~~dp~  247 (321)
T 1tki_A          182 TATDMWSLGTLVYVLLSGINPFLAETNQ--------QIIENIMNAEYTFD------EEAFKEISIEAMDFVDRLLVKERK  247 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCCCCC------HHHHTTSCHHHHHHHHTTSCSSGG
T ss_pred             chhhHHHHHHHHHHHHhCCCCCcCCCHH--------HHHHHHHcCCCCCC------hhhhccCCHHHHHHHHHHcCCChh
Confidence            9999999999999999999999654321        11122222111100      000112346788999999999999


Q ss_pred             CCCCCCccchhhhhh
Q 022858          137 AMPSMTVRPAKFMLH  151 (291)
Q Consensus       137 ~RPs~~~v~~~~~L~  151 (291)
                      +|||+.|+....++.
T Consensus       248 ~Rpt~~e~l~hp~~~  262 (321)
T 1tki_A          248 SRMTASEALQHPWLK  262 (321)
T ss_dssp             GSCCHHHHHHSHHHH
T ss_pred             HCcCHHHHhcChhhc
Confidence            999999993333444

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.89  E-value=4.4e-25  Score=189.48  Aligned_cols=137  Identities=14%  Similarity=0.155  Sum_probs=95.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCC-Cc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFP-VT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~-~~   56 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||.+.+.. ++
T Consensus       104 ~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  180 (292)
T 3o0g_A          104 KSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS  180 (292)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcC
Confidence            4688999999999999   99999999999999986643                        67799999998765 79


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---Cccchhhh------------hcccccchHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---GEFQDLII------------VCGMEKNNKEKAE  121 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------------~~~~~~~~~~~~~  121 (291)
                      .++|||||||++|||++|..|+......   ......+......   ........            .............
T Consensus       181 ~~~DiwslG~il~~l~~~~~p~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (292)
T 3o0g_A          181 TSIDMWSAGCIFAELANAGRPLFPGNDV---DDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNA  257 (292)
T ss_dssp             THHHHHHHHHHHHHHTTTSCCSCCCSSH---HHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCH
T ss_pred             chHHHHHHHHHHHHHHHcCCCCcCCCCH---HHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccCh
Confidence            9999999999999999988886433211   0111111111110   00000000            0000111223446


Q ss_pred             HHHHHHHHccccCCCCCCCCCcc
Q 022858          122 RMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       122 ~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .+.+++.+|++.||++|||+.|+
T Consensus       258 ~~~~li~~~L~~dP~~R~t~~e~  280 (292)
T 3o0g_A          258 TGRDLLQNLLKCNPVQRISAEEA  280 (292)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHHHHHHhccChhhCCCHHHH
Confidence            77899999999999999999998

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.89  E-value=9.3e-25  Score=197.58  Aligned_cols=78  Identities=29%  Similarity=0.381  Sum_probs=71.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..|+.||+.||+|||+   .+|+||||||+|||++.++.                       |+.|+|||++.+..++.+
T Consensus       203 ~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  279 (429)
T 3kvw_A          203 RKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMP  279 (429)
T ss_dssp             HHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTH
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeecccceecCCcccccCCCCCccChHHHhCCCCCch
Confidence            4689999999999999   89999999999999987642                       778999999999899999


Q ss_pred             cceechhHHHHHHhhCCCcccccc
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                      +|||||||++|||++|..||....
T Consensus       280 ~DiwSlG~il~elltG~~pf~~~~  303 (429)
T 3kvw_A          280 IDMWSLGCILAELLTGYPLLPGED  303 (429)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHHHhHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999997554

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.89  E-value=1.1e-24  Score=186.43  Aligned_cols=131  Identities=21%  Similarity=0.175  Sum_probs=98.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccC-
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMS-   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~-   52 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.+..                            ++.|+|||.+.+ 
T Consensus       116 ~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~  192 (289)
T 4fvq_A          116 LEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENP  192 (289)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCG
T ss_pred             HHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCccccCCcCcccCHHHhCCC
Confidence            5689999999999999   99999999999999976541                            778999999987 


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++||||||+++|||++|..|+......      .. ........           ...+......+.+++.+||+
T Consensus       193 ~~~~~~~DiwslG~il~el~~g~~~~~~~~~~------~~-~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~  254 (289)
T 4fvq_A          193 KNLNLATDKWSFGTTLWEICSGGDKPLSALDS------QR-KLQFYEDR-----------HQLPAPKAAELANLINNCMD  254 (289)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HH-HHHHHHTT-----------CCCCCCSSCTTHHHHHHHSC
T ss_pred             CCCCchhHHHHHHHHHHHHHcCCCCCccccch------HH-HHHHhhcc-----------CCCCCCCCHHHHHHHHHHcC
Confidence            67899999999999999999965544322211      11 11111110           00011113467889999999


Q ss_pred             cCCCCCCCCCccchhhhhhcccc
Q 022858          133 YKPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       133 ~~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      .||++|||+.++  ++.|+++..
T Consensus       255 ~dp~~Rps~~~l--l~~l~~l~~  275 (289)
T 4fvq_A          255 YEPDHRPSFRAI--IRDLNSLFT  275 (289)
T ss_dssp             SSGGGSCCHHHH--HHHHHTCC-
T ss_pred             CChhHCcCHHHH--HHHHHHhcC
Confidence            999999999999  999988765

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.89  E-value=2.2e-24  Score=184.17  Aligned_cols=138  Identities=19%  Similarity=0.219  Sum_probs=103.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ..++.|++.||+|||+   .+|+||||||+||+++.+..                          ++.|+|||.+.+..+
T Consensus       108 ~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  184 (284)
T 3kk8_A          108 SHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY  184 (284)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCB
T ss_pred             HHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCC
Confidence            4688999999999999   99999999999999974421                          778999999999899


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||||+++|+|++|..||......        ........+.....      .+........+.+++.+|++.||
T Consensus       185 ~~~~Di~slG~~l~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~dp  250 (284)
T 3kk8_A          185 SKPVDIWACGVILYILLVGYPPFWDEDQH--------RLYAQIKAGAYDYP------SPEWDTVTPEAKSLIDSMLTVNP  250 (284)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCCC------TTTTTTSCHHHHHHHHHHSCSST
T ss_pred             CcccchHHHHHHHHHHHHCCCCCCCCchh--------HHHHHHHhccccCC------chhhcccCHHHHHHHHHHcccCh
Confidence            99999999999999999999998654321        12222222211100      01112234678899999999999


Q ss_pred             CCCCCCCccchhhhhhccccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ++||++.|+.....+.+....
T Consensus       251 ~~Rps~~~~l~h~~~~~~~~~  271 (284)
T 3kk8_A          251 KKRITADQALKVPWICNRERV  271 (284)
T ss_dssp             TTSCCHHHHTTSHHHHSCCCG
T ss_pred             hhCCCHHHHhcCccccCChhH
Confidence            999999999444456555443

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.89  E-value=2e-24  Score=189.42  Aligned_cols=122  Identities=17%  Similarity=0.214  Sum_probs=96.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||++.+..++.
T Consensus       108 ~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  184 (337)
T 1o6l_A          108 RFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR  184 (337)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCT
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCc
Confidence            4578999999999999   99999999999999986643                        77899999999989999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......        .....+..+..          ..+......+.+++.+||+.||++
T Consensus       185 ~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~~~----------~~p~~~s~~~~~li~~lL~~dP~~  246 (337)
T 1o6l_A          185 AVDWWGLGVVMYEMMCGRLPFYNQDHE--------RLFELILMEEI----------RFPRTLSPEAKSLLAGLLKKDPKQ  246 (337)
T ss_dssp             THHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC----------CCCTTSCHHHHHHHHHHTCSSTTT
T ss_pred             hhhcccchhHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCC----------CCCCCCCHHHHHHHHHHhhcCHHH
Confidence            999999999999999999999654321        12222211111          111223467788999999999999


Q ss_pred             CC-----CCCcc
Q 022858          138 MP-----SMTVR  144 (291)
Q Consensus       138 RP-----s~~~v  144 (291)
                      ||     ++.|+
T Consensus       247 R~g~~~~~~~ei  258 (337)
T 1o6l_A          247 RLGGGPSDAKEV  258 (337)
T ss_dssp             STTCSTTTHHHH
T ss_pred             hcCCCCCCHHHH
Confidence            99     66666

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.89  E-value=1.2e-24  Score=185.52  Aligned_cols=131  Identities=21%  Similarity=0.233  Sum_probs=101.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                      ++.|+|||.+.+..++.++
T Consensus       112 ~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  188 (279)
T 3fdn_A          112 ATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV  188 (279)
T ss_dssp             HHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC--------CCCCTTCCHHHHTTCCCCTTH
T ss_pred             HHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCcccccccCCCCCccCHhHhccCCCCccc
Confidence            5689999999999999   99999999999999986643                      7889999999998899999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      ||||||+++|||++|..||......        .....+.....          ..+......+.+++.+||+.||++||
T Consensus       189 Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp  250 (279)
T 3fdn_A          189 DLWSLGVLCYEFLVGKPPFEANTYQ--------ETYKRISRVEF----------TFPDFVTEGARDLISRLLKHNPSQRP  250 (279)
T ss_dssp             HHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCC----------CCCTTSCHHHHHHHHHHCCSSGGGSC
T ss_pred             hhHhHHHHHHHHHHCCCCCCCCcHH--------HHHHHHHhCCC----------CCCCcCCHHHHHHHHHHhccChhhCC
Confidence            9999999999999999998654321        11222211111          11112335678899999999999999


Q ss_pred             CCCccchhhhhhcc
Q 022858          140 SMTVRPAKFMLHGS  153 (291)
Q Consensus       140 s~~~v~~~~~L~~~  153 (291)
                      ++.|+.....+...
T Consensus       251 s~~e~l~h~~~~~~  264 (279)
T 3fdn_A          251 MLREVLEHPWITAN  264 (279)
T ss_dssp             CHHHHHHCHHHHHH
T ss_pred             CHHHHhhCccccCC
Confidence            99999433444443

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.89  E-value=5.4e-24  Score=184.98  Aligned_cols=141  Identities=16%  Similarity=0.232  Sum_probs=99.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||++.+ ..++
T Consensus       111 ~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  187 (317)
T 2pmi_A          111 KYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYS  187 (317)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCC
T ss_pred             HHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCC
Confidence            3577899999999999   99999999999999986643                        778999999876 4689


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---C---------------------ccchhhhhccc
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---G---------------------EFQDLIIVCGM  112 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~---------------------~~~~~~~~~~~  112 (291)
                      .++|||||||++|||++|+.||......    .....+......   .                     .+.+.+.+.. 
T Consensus       188 ~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  262 (317)
T 2pmi_A          188 TSIDIWSCGCILAEMITGKPLFPGTNDE----EQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHT-  262 (317)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGC-
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccc-
Confidence            9999999999999999999999754421    011111111000   0                     0000111100 


Q ss_pred             ccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          113 EKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       113 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                         .......+.+++.+||+.||++|||+.|+.....+.+.
T Consensus       263 ---~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  300 (317)
T 2pmi_A          263 ---KEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEY  300 (317)
T ss_dssp             ---SSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             ---cccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcc
Confidence               11123578899999999999999999999433445443

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.89  E-value=1.5e-24  Score=191.93  Aligned_cols=133  Identities=20%  Similarity=0.237  Sum_probs=100.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.+..                          |+.|+|||++.+..+
T Consensus       131 ~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  207 (362)
T 2bdw_A          131 SHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY  207 (362)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCC
Confidence            4688999999999999   99999999999999975321                          788999999999899


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++|||||||++|||++|..||......        .....+..+.....      ..........+.+++.+||+.||
T Consensus       208 ~~~~DiwslG~il~~ll~g~~Pf~~~~~~--------~~~~~i~~~~~~~~------~~~~~~~~~~~~~li~~~L~~dP  273 (362)
T 2bdw_A          208 SKPVDIWACGVILYILLVGYPPFWDEDQH--------RLYAQIKAGAYDYP------SPEWDTVTPEAKSLIDSMLTVNP  273 (362)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCCC------TTGGGGSCHHHHHHHHHHSCSSG
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhCCCCCC------cccccCCCHHHHHHHHHHcCCCh
Confidence            99999999999999999999999654321        12222222211100      01112234678899999999999


Q ss_pred             CCCCCCCccchhhhhh
Q 022858          136 EAMPSMTVRPAKFMLH  151 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~  151 (291)
                      ++||++.++....++.
T Consensus       274 ~~R~t~~e~l~hp~~~  289 (362)
T 2bdw_A          274 KKRITADQALKVPWIC  289 (362)
T ss_dssp             GGSCCHHHHTTSHHHH
T ss_pred             hhCcCHHHHhcCcccC
Confidence            9999999994334443

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.89  E-value=4.1e-25  Score=189.09  Aligned_cols=125  Identities=18%  Similarity=0.220  Sum_probs=94.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCC-CeEeecCCCCcEEEccCCC-----------------------CCccccCccc----cCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQ-QIIHYNIKPENILLDVKFW-----------------------TPGYAAPETW----MSF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~-~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~----~~~   53 (291)
                      +.|+.|++.||+|||+   . +|+||||||+|||++.++.                       ++.|+|||.+    .+.
T Consensus       112 ~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  188 (290)
T 3fme_A          112 GKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQK  188 (290)
T ss_dssp             HHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC---------------CCCCCCSCHHHHSCCTTC-
T ss_pred             HHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccccccccccccCCCccccChhhcChhhcCc
Confidence            4689999999999999   7 9999999999999987543                       7889999996    455


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      .++.++||||||+++|||++|+.||......      ............         ...........+.+++.+|++.
T Consensus       189 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~  253 (290)
T 3fme_A          189 GYSVKSDIWSLGITMIELAILRFPYDSWGTP------FQQLKQVVEEPS---------PQLPADKFSAEFVDFTSQCLKK  253 (290)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH------HHHHHHHHHSCC---------CCCCTTTSCHHHHHHHHHHTCS
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCccccCch------HHHHHHHhccCC---------CCcccccCCHHHHHHHHHHhhc
Confidence            7899999999999999999999998643221      111222221111         1111122346788999999999


Q ss_pred             CCCCCCCCCcc
Q 022858          134 KPEAMPSMTVR  144 (291)
Q Consensus       134 ~p~~RPs~~~v  144 (291)
                      ||++|||+.|+
T Consensus       254 ~p~~Rpt~~e~  264 (290)
T 3fme_A          254 NSKERPTYPEL  264 (290)
T ss_dssp             SGGGSCCHHHH
T ss_pred             ChhhCcCHHHH
Confidence            99999999999

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.89  E-value=8.3e-25  Score=193.58  Aligned_cols=136  Identities=20%  Similarity=0.156  Sum_probs=97.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.+..                         |+.|+|||++.+..++
T Consensus       119 ~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  195 (361)
T 3uc3_A          119 RFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYD  195 (361)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------------CTTSCHHHHHCSSCC
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCC
Confidence            4689999999999999   99999999999999975431                         7899999999887776


Q ss_pred             cc-cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HK-CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~-~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .+ +|||||||++|||++|+.||........   ... ..........        ..+........+.+++.+||+.||
T Consensus       196 ~~~~DiwslG~il~ell~g~~Pf~~~~~~~~---~~~-~~~~~~~~~~--------~~~~~~~~s~~~~~li~~~L~~dP  263 (361)
T 3uc3_A          196 GKIADVWSCGVTLYVMLVGAYPFEDPEEPRD---YRK-TIQRILSVKY--------SIPDDIRISPECCHLISRIFVADP  263 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSCC----CCC---HHH-HHHHHHTTCC--------CCCTTSCCCHHHHHHHHHHSCSCT
T ss_pred             CCeeeeehhHHHHHHHHhCCCCCCCCccHHH---HHH-HHHHHhcCCC--------CCCCcCCCCHHHHHHHHHHccCCh
Confidence            55 8999999999999999999976543211   111 1111111110        011111223677899999999999


Q ss_pred             CCCCCCCccchhhhhhc
Q 022858          136 EAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~  152 (291)
                      ++|||+.|+.....+..
T Consensus       264 ~~Rps~~ell~hp~f~~  280 (361)
T 3uc3_A          264 ATRISIPEIKTHSWFLK  280 (361)
T ss_dssp             TTSCCHHHHHTSHHHHT
T ss_pred             hHCcCHHHHHhCcchhc
Confidence            99999999944444543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.89  E-value=5e-25  Score=194.04  Aligned_cols=124  Identities=24%  Similarity=0.279  Sum_probs=95.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------CCccccCcccc---CCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------TPGYAAPETWM---SFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------t~~y~aPE~~~---~~~~~~~   58 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                    |+.|+|||++.   ...++.+
T Consensus       157 ~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  233 (348)
T 1u5q_A          157 AAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGK  233 (348)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHHTTSSCCBCTH
T ss_pred             HHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccCCcceeCHhhhccccCCCCCcH
Confidence            5688999999999999   99999999999999987542                    78899999985   4678999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|||||||++|||++|+.||.....       ......... .....        .........+.+++.+||+.||++|
T Consensus       234 ~DiwslG~il~ell~g~~p~~~~~~-------~~~~~~~~~-~~~~~--------~~~~~~~~~l~~li~~~l~~dP~~R  297 (348)
T 1u5q_A          234 VDVWSLGITCIELAERKPPLFNMNA-------MSALYHIAQ-NESPA--------LQSGHWSEYFRNFVDSCLQKIPQDR  297 (348)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHH-SCCCC--------CCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHHh-cCCCC--------CCCCCCCHHHHHHHHHHcccChhhC
Confidence            9999999999999999999865432       111221111 11111        0111224567889999999999999


Q ss_pred             CCCCcc
Q 022858          139 PSMTVR  144 (291)
Q Consensus       139 Ps~~~v  144 (291)
                      ||+.++
T Consensus       298 ps~~~l  303 (348)
T 1u5q_A          298 PTSEVL  303 (348)
T ss_dssp             CCHHHH
T ss_pred             cCHHHH
Confidence            999999

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.89  E-value=2.9e-24  Score=194.92  Aligned_cols=126  Identities=19%  Similarity=0.268  Sum_probs=97.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC---C------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF---W------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~---~------------------------t~~y~aPE~~~~~~   54 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.+.   .                        |+.|+|||++.+..
T Consensus       113 ~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~  189 (444)
T 3soa_A          113 SHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP  189 (444)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCC
Confidence            4688999999999999   9999999999999998421   1                        78899999999989


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||+||++|+|++|..||......        .....+..+.....      .+........+.+++.+||+.|
T Consensus       190 ~~~~~DIwSlGvilyell~G~~Pf~~~~~~--------~~~~~i~~~~~~~~------~~~~~~~s~~~~~li~~~L~~d  255 (444)
T 3soa_A          190 YGKPVDLWACGVILYILLVGYPPFWDEDQH--------RLYQQIKAGAYDFP------SPEWDTVTPEAKDLINKMLTIN  255 (444)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHTCCCCC------TTTTTTSCHHHHHHHHHHSCSS
T ss_pred             CCCccccHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHhCCCCCC------ccccccCCHHHHHHHHHHcCCC
Confidence            999999999999999999999999654321        12222222221100      1111223467889999999999


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |++|||+.|+
T Consensus       256 P~~Rpta~e~  265 (444)
T 3soa_A          256 PSKRITAAEA  265 (444)
T ss_dssp             TTTSCCHHHH
T ss_pred             hhHCCCHHHH
Confidence            9999999999

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.89  E-value=5.6e-25  Score=191.85  Aligned_cols=144  Identities=16%  Similarity=0.149  Sum_probs=104.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                           +..|+|||.+.+..
T Consensus       148 ~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  224 (326)
T 2w1i_A          148 LQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK  224 (326)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCC
Confidence            5689999999999999   99999999999999986532                           34599999999888


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccC----CCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHc
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARS----GFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWR  130 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c  130 (291)
                      ++.++||||||+++|||++|..|+.......    ...........     .+.+.+......+.+..++..+.+++.+|
T Consensus       225 ~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~c  299 (326)
T 2w1i_A          225 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF-----HLIELLKNNGRLPRPDGCPDEIYMIMTEC  299 (326)
T ss_dssp             EEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHH-----HHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHH-----HHHHHhhcCCCCCCCCcccHHHHHHHHHH
Confidence            9999999999999999999999876432100    00000000000     00111111111122334457889999999


Q ss_pred             cccCCCCCCCCCccchhhhhhcccc
Q 022858          131 VQYKPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       131 l~~~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      |+.||++||++.++  ++.|+.+..
T Consensus       300 l~~dP~~Rps~~el--~~~L~~l~~  322 (326)
T 2w1i_A          300 WNNNVNQRPSFRDL--ALRVDQIRD  322 (326)
T ss_dssp             SCSSGGGSCCHHHH--HHHHHHHHH
T ss_pred             cCCChhhCcCHHHH--HHHHHHHHH
Confidence            99999999999999  999987754

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.89  E-value=1.1e-24  Score=190.78  Aligned_cols=116  Identities=22%  Similarity=0.215  Sum_probs=94.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCC-cc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPV-TH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~-~~   57 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                       |+.|+|||++.+..+ +.
T Consensus       133 ~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  209 (335)
T 3dls_A          133 SYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGP  209 (335)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSH
T ss_pred             HHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCC
Confidence            4689999999999999   99999999999999987643                       779999999988776 78


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|..||........                  ...      ..+......+.+++.+||+.||++
T Consensus       210 ~~DiwslG~il~el~~g~~pf~~~~~~~~------------------~~~------~~~~~~~~~l~~li~~~L~~dP~~  265 (335)
T 3dls_A          210 ELEMWSLGVTLYTLVFEENPFCELEETVE------------------AAI------HPPYLVSKELMSLVSGLLQPVPER  265 (335)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCSSGGGGTT------------------TCC------CCSSCCCHHHHHHHHHHTCSSGGG
T ss_pred             cccchhHHHHHHHHHhCCCchhhHHHHHh------------------hcc------CCCcccCHHHHHHHHHHccCChhh
Confidence            99999999999999999999965332100                  000      001112356889999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       266 Rps~~el  272 (335)
T 3dls_A          266 RTTLEKL  272 (335)
T ss_dssp             SCCHHHH
T ss_pred             CcCHHHH
Confidence            9999999

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.89  E-value=2.6e-24  Score=187.73  Aligned_cols=126  Identities=18%  Similarity=0.230  Sum_probs=96.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC----C-----------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF----W-----------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~----~-----------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++    .                       |+.|+|||++.+..
T Consensus       117 ~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~  193 (326)
T 2y0a_A          117 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP  193 (326)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCC
Confidence            5789999999999999   9999999999999997654    1                       77899999999889


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++|||||||++|||++|..||......        .....+...... ..     ..........+.+++.+||+.|
T Consensus       194 ~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~li~~~L~~d  259 (326)
T 2y0a_A          194 LGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANVSAVNYE-FE-----DEYFSNTSALAKDFIRRLLVKD  259 (326)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHHTCCC-CC-----HHHHTTSCHHHHHHHHHHSCSS
T ss_pred             CCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--------HHHHHHHhcCCC-cC-----ccccccCCHHHHHHHHHHccCC
Confidence            999999999999999999999999654321        111111111110 00     0011122456789999999999


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |++|||+.++
T Consensus       260 P~~Rpt~~e~  269 (326)
T 2y0a_A          260 PKKRMTIQDS  269 (326)
T ss_dssp             GGGSCCHHHH
T ss_pred             hhhCCCHHHH
Confidence            9999999999

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.89  E-value=1.4e-24  Score=189.17  Aligned_cols=121  Identities=24%  Similarity=0.289  Sum_probs=94.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC------------------------------------CCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------------------WTPGYA   45 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~------------------------------------~t~~y~   45 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++                                    +|+.|+
T Consensus       167 ~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  243 (332)
T 3qd2_B          167 LHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYM  243 (332)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGS
T ss_pred             HHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCcc
Confidence            4689999999999999   9999999999999998543                                    267899


Q ss_pred             cCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHH
Q 022858           46 APETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMAL  125 (291)
Q Consensus        46 aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (291)
                      |||++.+..++.++||||||+++|||++|..|+.....          ...........         .........+.+
T Consensus       244 aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~----------~~~~~~~~~~~---------~~~~~~~~~~~~  304 (332)
T 3qd2_B          244 SPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR----------IITDVRNLKFP---------LLFTQKYPQEHM  304 (332)
T ss_dssp             CHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH----------HHHHHHTTCCC---------HHHHHHCHHHHH
T ss_pred             ChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH----------HHHHhhccCCC---------cccccCChhHHH
Confidence            99999998999999999999999999998776532211          11111111111         122334466788


Q ss_pred             HHHHccccCCCCCCCCCcc
Q 022858          126 VALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v  144 (291)
                      ++.+||+.||++||++.|+
T Consensus       305 li~~~l~~~p~~Rps~~~~  323 (332)
T 3qd2_B          305 MVQDMLSPSPTERPEATDI  323 (332)
T ss_dssp             HHHHHHCSSGGGSCCHHHH
T ss_pred             HHHHHccCCCCcCCCHHHH
Confidence            9999999999999999998

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.89  E-value=1.6e-24  Score=195.52  Aligned_cols=145  Identities=19%  Similarity=0.176  Sum_probs=100.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.+..                        |+.|+|||++.+. .++
T Consensus       159 ~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  235 (420)
T 1j1b_A          159 KLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYT  235 (420)
T ss_dssp             HHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCC
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCC
Confidence            4678999999999999   99999999999999985532                        7789999998765 789


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc----------Cccchhhhhccccc-----chHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK----------GEFQDLIIVCGMEK-----NNKEKAE  121 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~-----~~~~~~~  121 (291)
                      .++|||||||++|||++|+.||.......    ....+......          ....+...+.....     .......
T Consensus       236 ~~~DiwSlG~il~ell~G~~pf~~~~~~~----~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  311 (420)
T 1j1b_A          236 SSIDVWSAGCVLAELLLGQPIFPGDSGVD----QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPP  311 (420)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCH
T ss_pred             chhhhHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCH
Confidence            99999999999999999999997654210    01111111000          00000000000000     1112246


Q ss_pred             HHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          122 RMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       122 ~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      .+.+|+.+||+.||++||++.|+.....+++.
T Consensus       312 ~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~  343 (420)
T 1j1b_A          312 EAIALCSRLLEYTPTARLTPLEACAHSFFDEL  343 (420)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             HHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence            78899999999999999999999434455544

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.89  E-value=2.8e-24  Score=189.00  Aligned_cols=130  Identities=22%  Similarity=0.237  Sum_probs=100.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||++.+..++.
T Consensus       121 ~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  197 (345)
T 1xjd_A          121 TFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNH  197 (345)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCC
Confidence            4688999999999999   99999999999999986543                        77899999999989999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|..||......        .....+..+..          ..+......+.+++.+||+.||++
T Consensus       198 ~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~~~----------~~p~~~s~~~~~li~~lL~~dp~~  259 (345)
T 1xjd_A          198 SVDWWSFGVLLYEMLIGQSPFHGQDEE--------ELFHSIRMDNP----------FYPRWLEKEAKDLLVKLFVREPEK  259 (345)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC----------CCCTTSCHHHHHHHHHHSCSSGGG
T ss_pred             hhhhHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHhCCC----------CCCcccCHHHHHHHHHHhcCCHhH
Confidence            999999999999999999999754321        12222221110          111123467788999999999999


Q ss_pred             CCCCC-ccchhhhhhc
Q 022858          138 MPSMT-VRPAKFMLHG  152 (291)
Q Consensus       138 RPs~~-~v~~~~~L~~  152 (291)
                      ||++. ++.....+.+
T Consensus       260 R~~~~~~i~~hp~f~~  275 (345)
T 1xjd_A          260 RLGVRGDIRQHPLFRE  275 (345)
T ss_dssp             SBTTBSCGGGSGGGTT
T ss_pred             cCCChHHHHcCccccC
Confidence            99997 7733344443

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.89  E-value=4.3e-24  Score=190.32  Aligned_cols=80  Identities=26%  Similarity=0.366  Sum_probs=70.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc--CCC---------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV--KFW---------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~--~~~---------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..|+.|++.||.|||+. ..+|+||||||+|||++.  ++.                     |+.|+|||++.+..++.+
T Consensus       160 ~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  238 (382)
T 2vx3_A          160 RKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLA  238 (382)
T ss_dssp             HHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTH
T ss_pred             HHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccccccccCCccccChHHHcCCCCCcH
Confidence            46899999999999952 278999999999999953  221                     788999999999999999


Q ss_pred             cceechhHHHHHHhhCCCcccccc
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                      +|||||||++|||++|+.||....
T Consensus       239 ~DiwSlG~il~elltg~~pf~~~~  262 (382)
T 2vx3_A          239 IDMWSLGCILVEMHTGEPLFSGAN  262 (382)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999997554

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.89  E-value=2.9e-24  Score=182.48  Aligned_cols=125  Identities=22%  Similarity=0.194  Sum_probs=95.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.++.                          ++.|+|||.+.+..+
T Consensus       108 ~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  184 (276)
T 2yex_A          108 QRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF  184 (276)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSB
T ss_pred             HHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCC
Confidence            5789999999999999   99999999999999986543                          667999999987665


Q ss_pred             -ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 -THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 -~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                       +.++||||||+++|||++|..||.......      . ....+.....        ...........+.+++.+||+.|
T Consensus       185 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~-~~~~~~~~~~--------~~~~~~~~~~~~~~li~~~l~~~  249 (276)
T 2yex_A          185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------Q-EYSDWKEKKT--------YLNPWKKIDSAPLALLHKILVEN  249 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS------H-HHHHHHTTCT--------TSTTGGGSCHHHHHHHHHHSCSS
T ss_pred             CCCcchHHHHHHHHHHHHhCCCCCCCCchHH------H-HHHHhhhccc--------ccCchhhcCHHHHHHHHHHCCCC
Confidence             788999999999999999999997544220      0 1111111100        00111223456788999999999


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |++|||+.++
T Consensus       250 p~~Rps~~~i  259 (276)
T 2yex_A          250 PSARITIPDI  259 (276)
T ss_dssp             TTTSCCHHHH
T ss_pred             chhCCCHHHH
Confidence            9999999999

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.89  E-value=2.3e-24  Score=183.52  Aligned_cols=122  Identities=19%  Similarity=0.233  Sum_probs=80.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.++.                        ++.|+|||.+.+..++.
T Consensus       115 ~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  191 (278)
T 3cok_A          115 RHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGL  191 (278)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC----------------------------
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCc
Confidence            5689999999999999   99999999999999987643                        67899999999888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|+.||.........        ......   ..       ..+......+.+++.+||+.||++
T Consensus       192 ~~Di~slG~il~~l~~g~~p~~~~~~~~~~--------~~~~~~---~~-------~~~~~~~~~~~~li~~~l~~dp~~  253 (278)
T 3cok_A          192 ESDVWSLGCMFYTLLIGRPPFDTDTVKNTL--------NKVVLA---DY-------EMPSFLSIEAKDLIHQLLRRNPAD  253 (278)
T ss_dssp             CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CCSS---CC-------CCCTTSCHHHHHHHHHHSCSSGGG
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCChhHHHHH--------HHHhhc---cc-------CCccccCHHHHHHHHHHcccCHhh
Confidence            999999999999999999999755432110        000000   00       011123357789999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       254 Rps~~~~  260 (278)
T 3cok_A          254 RLSLSSV  260 (278)
T ss_dssp             SCCHHHH
T ss_pred             CCCHHHH
Confidence            9999999

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.89  E-value=4.8e-24  Score=188.60  Aligned_cols=133  Identities=17%  Similarity=0.171  Sum_probs=99.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC----C-----------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF----W-----------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~----~-----------------------t~~y~aPE~~~~~~   54 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++    .                       |+.|+|||++.+..
T Consensus       118 ~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~  194 (361)
T 2yab_A          118 TSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP  194 (361)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCC
Confidence            4689999999999999   9999999999999997654    1                       77899999999889


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++|||||||++|+|++|..||......        .....+..+...-  ++    .........+.+++.+||+.|
T Consensus       195 ~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--------~~~~~i~~~~~~~--~~----~~~~~~s~~~~~li~~~L~~d  260 (361)
T 2yab_A          195 LGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANITAVSYDF--DE----EFFSQTSELAKDFIRKLLVKE  260 (361)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTTCCCC--CH----HHHTTSCHHHHHHHHHHSCSS
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhcCCCC--Cc----hhccCCCHHHHHHHHHHCCCC
Confidence            999999999999999999999999754321        1122222211100  00    001122456788999999999


Q ss_pred             CCCCCCCCccchhhhhh
Q 022858          135 PEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~  151 (291)
                      |++|||+.|+....++.
T Consensus       261 P~~R~t~~e~l~hp~~~  277 (361)
T 2yab_A          261 TRKRLTIQEALRHPWIT  277 (361)
T ss_dssp             TTTSCCHHHHHTSTTTS
T ss_pred             hhHCcCHHHHhcCcCcC
Confidence            99999999993333443

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.89  E-value=2e-23  Score=179.25  Aligned_cols=122  Identities=22%  Similarity=0.305  Sum_probs=96.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||.+.+..++.
T Consensus       118 ~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  194 (294)
T 2rku_A          118 RYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF  194 (294)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCT
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCc
Confidence            5689999999999999   99999999999999987643                        66799999999888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|+.||......       + ..........          ..+......+.+++.+|++.||++
T Consensus       195 ~~Di~slG~~l~~l~~g~~p~~~~~~~-------~-~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~  256 (294)
T 2rku_A          195 EVDVWSIGCIMYTLLVGKPPFETSCLK-------E-TYLRIKKNEY----------SIPKHINPVAASLIQKMLQTDPTA  256 (294)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTCCSSHH-------H-HHHHHHTTCC----------CCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHH-------H-HHHHHhhccC----------CCccccCHHHHHHHHHHcccChhh
Confidence            999999999999999999998654321       1 1111111111          011122356788999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       257 Rps~~~l  263 (294)
T 2rku_A          257 RPTINEL  263 (294)
T ss_dssp             SCCGGGG
T ss_pred             CcCHHHH
Confidence            9999999

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.89  E-value=7.9e-24  Score=184.48  Aligned_cols=147  Identities=13%  Similarity=0.182  Sum_probs=102.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||.+.+ ..++
T Consensus       103 ~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  179 (324)
T 3mtl_A          103 KLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYS  179 (324)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCC
T ss_pred             HHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCC
Confidence            4678999999999999   99999999999999987643                        778999999876 5689


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---Cccchhhhh---------ccc----ccchHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---GEFQDLIIV---------CGM----EKNNKEKA  120 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---------~~~----~~~~~~~~  120 (291)
                      .++|||||||++|||++|+.||......    .....+......   ..+......         ...    ........
T Consensus       180 ~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (324)
T 3mtl_A          180 TQIDMWGVGCIFYEMATGRPLFPGSTVE----EQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLD  255 (324)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSC
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCC
Confidence            9999999999999999999999765422    111111111100   000000000         000    00011224


Q ss_pred             HHHHHHHHHccccCCCCCCCCCccchhhhhhcccc
Q 022858          121 ERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       121 ~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ..+.+++.+||+.||++|||+.|+.....+.+...
T Consensus       256 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          256 SDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred             HHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence            56789999999999999999999944445655543

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.89  E-value=2.4e-24  Score=187.91  Aligned_cols=145  Identities=14%  Similarity=0.115  Sum_probs=99.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                        +..|+|||.+.+ ..++
T Consensus       133 ~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  209 (330)
T 3nsz_A          133 RFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD  209 (330)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCC
Confidence            4688999999999999   99999999999999986542                        677999999887 6789


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhc-----------------------ccc
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVC-----------------------GME  113 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~  113 (291)
                      .++|||||||++|||++|+.||......   .................+.++..                       ...
T Consensus       210 ~~~DiwslG~il~~ll~g~~p~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (330)
T 3nsz_A          210 YSLDMWSLGCMLASMIFRKEPFFHGHDN---YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS  286 (330)
T ss_dssp             THHHHHHHHHHHHHHHHTCSSSSCCSSH---HHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCT
T ss_pred             chhhHHHHHHHHHHHHhCCCCcccCCch---HHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccc
Confidence            9999999999999999999998543221   00000000000000000000000                       001


Q ss_pred             cchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhc
Q 022858          114 KNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       114 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~  152 (291)
                      .........+.+++.+||+.||++|||+.|+.....+..
T Consensus       287 ~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~  325 (330)
T 3nsz_A          287 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT  325 (330)
T ss_dssp             TTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             cccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhh
Confidence            111123567899999999999999999999933334443

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.89  E-value=7.7e-25  Score=191.37  Aligned_cols=143  Identities=20%  Similarity=0.191  Sum_probs=100.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||.+.+. .++
T Consensus       127 ~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  203 (331)
T 4aaa_A          127 QKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG  203 (331)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC------------CCCCCTTCCHHHHTTCTTCC
T ss_pred             HHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcc
Confidence            4689999999999999   99999999999999986643                        7789999998875 789


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHH-----------hhc------CccchhhhhcccccchHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKK-----------LEK------GEFQDLIIVCGMEKNNKEK  119 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~  119 (291)
                      .++||||||+++|||++|+.||.......    ....+...           +..      ..+.............+..
T Consensus       204 ~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (331)
T 4aaa_A          204 KAVDVWAIGCLVTEMFMGEPLFPGDSDID----QLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKL  279 (331)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTS
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCCCcHH----HHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccch
Confidence            99999999999999999999997554221    00000000           000      0000000000000011133


Q ss_pred             HHHHHHHHHHccccCCCCCCCCCccchhhhhh
Q 022858          120 AERMALVALWRVQYKPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       120 ~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~  151 (291)
                      ...+.+++.+||+.||++||++.|+.....++
T Consensus       280 ~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~  311 (331)
T 4aaa_A          280 SEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ  311 (331)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             hHHHHHHHHHHhccCcccCCCHHHHhcCchhc
Confidence            56789999999999999999999993333343

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.89  E-value=3e-24  Score=191.99  Aligned_cols=128  Identities=19%  Similarity=0.244  Sum_probs=96.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||++.+..++.
T Consensus       156 ~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~  232 (396)
T 4dc2_A          156 RFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGF  232 (396)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCCh
Confidence            4578999999999999   99999999999999986643                        78899999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCC-CCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSG-FPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      ++|||||||++|||++|+.||........ ...........+.....          ..+......+.+++.+||+.||.
T Consensus       233 ~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~----------~~p~~~s~~~~~li~~lL~~dP~  302 (396)
T 4dc2_A          233 SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----------RIPRSLSVKAASVLKSFLNKDPK  302 (396)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC----------CCCTTSCHHHHHHHHHHTCSCTT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc----------CCCCcCCHHHHHHHHHHhcCCHh
Confidence            99999999999999999999965432211 11112222222222111          11222346778999999999999


Q ss_pred             CCCCCC
Q 022858          137 AMPSMT  142 (291)
Q Consensus       137 ~RPs~~  142 (291)
                      +||++.
T Consensus       303 ~R~~~~  308 (396)
T 4dc2_A          303 ERLGCH  308 (396)
T ss_dssp             TSTTCS
T ss_pred             HcCCCC
Confidence            999973

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.89  E-value=2.1e-24  Score=189.63  Aligned_cols=137  Identities=17%  Similarity=0.199  Sum_probs=101.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-----------C-----------------CCccccCccccCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-----------W-----------------TPGYAAPETWMSF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-----------~-----------------t~~y~aPE~~~~~   53 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||+..+.           +                 |+.|+|||++.+.
T Consensus       119 ~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  195 (342)
T 2qr7_A          119 SAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQ  195 (342)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCC
Confidence            4688999999999999   9999999999999984321           1                 7789999999887


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      .++.++|||||||++|||++|..||......     ....+...+..+....      ...........+.+++.+||+.
T Consensus       196 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~~~~~i~~~~~~~------~~~~~~~~s~~~~~li~~~L~~  264 (342)
T 2qr7_A          196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDD-----TPEEILARIGSGKFSL------SGGYWNSVSDTAKDLVSKMLHV  264 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS-----CHHHHHHHHHHCCCCC------CSTTTTTSCHHHHHHHHHHTCS
T ss_pred             CCCCccCeeeHhHHHHHHhcCCCCCCCCCcC-----CHHHHHHHHccCCccc------CccccccCCHHHHHHHHHHCCC
Confidence            8999999999999999999999999753221     1222333333322210      0111123346788999999999


Q ss_pred             CCCCCCCCCccchhhhhhc
Q 022858          134 KPEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~  152 (291)
                      ||++||++.++....++..
T Consensus       265 dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          265 DPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             STTTSCCHHHHTTSHHHHT
T ss_pred             ChhHCcCHHHHhcCCeecC
Confidence            9999999999944445533

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.89  E-value=1.8e-24  Score=186.54  Aligned_cols=123  Identities=21%  Similarity=0.195  Sum_probs=96.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.++.                        ++.|+|||.+.+..++.
T Consensus       122 ~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  198 (303)
T 3a7i_A          122 ATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS  198 (303)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCc
Confidence            5789999999999999   99999999999999986643                        66799999999989999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|..||......       . ..........         ..........+.+++..||+.||++
T Consensus       199 ~~Di~slG~il~~l~~g~~p~~~~~~~-------~-~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~  261 (303)
T 3a7i_A          199 KADIWSLGITAIELARGEPPHSELHPM-------K-VLFLIPKNNP---------PTLEGNYSKPLKEFVEACLNKEPSF  261 (303)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHH-------H-HHHHHHHSCC---------CCCCSSCCHHHHHHHHHHCCSSGGG
T ss_pred             hhhhHHHHHHHHHHccCCCCCCCcCHH-------H-HHHHhhcCCC---------CCCccccCHHHHHHHHHHcCCChhh
Confidence            999999999999999999998644321       1 1111111111         1111123456889999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       262 Rps~~~l  268 (303)
T 3a7i_A          262 RPTAKEL  268 (303)
T ss_dssp             SCCHHHH
T ss_pred             CcCHHHH
Confidence            9999999

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.89  E-value=4.1e-24  Score=185.03  Aligned_cols=135  Identities=19%  Similarity=0.191  Sum_probs=100.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                         ++.|+|||.+.+..++
T Consensus       137 ~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  213 (309)
T 2h34_A          137 VAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHAT  213 (309)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTCC----
T ss_pred             HHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCC
Confidence            5789999999999999   99999999999999986543                         6679999999988999


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++||||||+++|||++|+.||......        ......... ....      .......+..+.+++.+||+.||+
T Consensus       214 ~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~-~~~~------~~~~~~~~~~l~~li~~~l~~dP~  278 (309)
T 2h34_A          214 YRADIYALTCVLYECLTGSPPYQGDQLS--------VMGAHINQA-IPRP------STVRPGIPVAFDAVIARGMAKNPE  278 (309)
T ss_dssp             CCCHHHHHHHHHHHHHHSSCSSCSCHHH--------HHHHHHHSC-CCCG------GGTSTTCCTHHHHHHHHHTCSSGG
T ss_pred             chHhHHHHHHHHHHHHHCCCCCCCchHH--------HHHHHhccC-CCCc------cccCCCCCHHHHHHHHHhccCCHH
Confidence            9999999999999999999999754321        111222111 1100      111223345788899999999999


Q ss_pred             CCC-CCCccchhhhhhccccc
Q 022858          137 AMP-SMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       137 ~RP-s~~~v~~~~~L~~~~~~  156 (291)
                      +|| ++.++  ++.|+.....
T Consensus       279 ~Rp~s~~~l--~~~l~~~l~~  297 (309)
T 2h34_A          279 DRYVTCGDL--SAAAHAALAT  297 (309)
T ss_dssp             GSCSSHHHH--HHHHHHTCC-
T ss_pred             HHHHhHHHH--HHHHHHHHHh
Confidence            999 88999  8888877554

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.89  E-value=1.8e-24  Score=184.62  Aligned_cols=120  Identities=16%  Similarity=0.283  Sum_probs=92.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-------------------C--------------------CC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-------------------W--------------------TP   42 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-------------------~--------------------t~   42 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++                   .                    ++
T Consensus       118 ~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~  194 (289)
T 1x8b_A          118 KDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS  194 (289)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSCCCCCCG
T ss_pred             HHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCccccCCCc
Confidence            5789999999999999   9999999999999998432                   1                    77


Q ss_pred             ccccCccccCC-CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHH
Q 022858           43 GYAAPETWMSF-PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAE  121 (291)
Q Consensus        43 ~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (291)
                      .|+|||.+.+. .++.++||||||+++|||++|.+++....           ....+..+....         .+.....
T Consensus       195 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----------~~~~~~~~~~~~---------~~~~~~~  254 (289)
T 1x8b_A          195 RFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-----------QWHEIRQGRLPR---------IPQVLSQ  254 (289)
T ss_dssp             GGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-----------HHHHHHTTCCCC---------CSSCCCH
T ss_pred             cccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-----------HHHHHHcCCCCC---------CCcccCH
Confidence            89999999875 67789999999999999999988764322           112222222211         1122346


Q ss_pred             HHHHHHHHccccCCCCCCCCCcc
Q 022858          122 RMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       122 ~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .+.+++.+||+.||++||++.++
T Consensus       255 ~~~~li~~~l~~dp~~Rps~~~l  277 (289)
T 1x8b_A          255 EFTELLKVMIHPDPERRPSAMAL  277 (289)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHHHHHHHhCCCcccCCCHHHH
Confidence            78899999999999999999998

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.89  E-value=4.9e-24  Score=189.26  Aligned_cols=141  Identities=21%  Similarity=0.188  Sum_probs=101.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                       |+.|+|||++.+..++.+
T Consensus       130 ~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  206 (371)
T 2xrw_A          130 SYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN  206 (371)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC----------------CTTCCHHHHTTCCCCTT
T ss_pred             HHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCch
Confidence            4688999999999999   99999999999999987643                       778999999999899999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc-----------------------Cc-----cchhhhh-
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK-----------------------GE-----FQDLIIV-  109 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~-----~~~~~~~-  109 (291)
                      +|||||||++|||++|+.||......       .........                       ..     +...... 
T Consensus       207 ~DiwslG~il~el~~g~~pf~~~~~~-------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (371)
T 2xrw_A          207 VDIWSVGCIMGEMIKGGVLFPGTDHI-------DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDV  279 (371)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGG
T ss_pred             HhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccc
Confidence            99999999999999999999754321       000000000                       00     0000000 


Q ss_pred             --cccccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhc
Q 022858          110 --CGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       110 --~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~  152 (291)
                        +............+.+++.+||+.||++|||+.|+.....+..
T Consensus       280 ~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  324 (371)
T 2xrw_A          280 LFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  324 (371)
T ss_dssp             GSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             cCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence              0001112234577899999999999999999999944445543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.89  E-value=3.6e-24  Score=188.63  Aligned_cols=127  Identities=19%  Similarity=0.251  Sum_probs=97.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc---CCC-----------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV---KFW-----------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~---~~~-----------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.   ++.                       |+.|+|||++.+..+
T Consensus       151 ~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  227 (349)
T 2w4o_A          151 ADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAY  227 (349)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCC
Confidence            5689999999999999   99999999999999974   221                       778999999999899


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++|||||||++|||++|..||......       ......+.......      ..+........+.+++.+||+.||
T Consensus       228 ~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~i~~~~~~~------~~~~~~~~~~~~~~li~~~L~~dP  294 (349)
T 2w4o_A          228 GPEVDMWSVGIITYILLCGFEPFYDERGD-------QFMFRRILNCEYYF------ISPWWDEVSLNAKDLVRKLIVLDP  294 (349)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTCCTTCH-------HHHHHHHHTTCCCC------CTTTTTTSCHHHHHHHHTTSCSSG
T ss_pred             CcccchHHHHHHHHHHHhCCCCCCCCccc-------HHHHHHHHhCCCcc------CCchhhhCCHHHHHHHHHHccCCh
Confidence            99999999999999999999998654321       11222222211110      011112334678899999999999


Q ss_pred             CCCCCCCcc
Q 022858          136 EAMPSMTVR  144 (291)
Q Consensus       136 ~~RPs~~~v  144 (291)
                      ++||++.++
T Consensus       295 ~~Rpt~~e~  303 (349)
T 2w4o_A          295 KKRLTTFQA  303 (349)
T ss_dssp             GGSCCHHHH
T ss_pred             hhCcCHHHH
Confidence            999999998

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.88  E-value=1.4e-24  Score=191.49  Aligned_cols=119  Identities=22%  Similarity=0.239  Sum_probs=94.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||++.+..++.
T Consensus       127 ~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  203 (353)
T 3txo_A          127 RFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGP  203 (353)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCC
Confidence            4588999999999999   99999999999999986643                        78899999998888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......        .....+..+..          ..+......+.+++.+||+.||.+
T Consensus       204 ~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~~~----------~~p~~~~~~~~~li~~lL~~dP~~  265 (353)
T 3txo_A          204 AVDWWAMGVLLYEMLCGHAPFEAENED--------DLFEAILNDEV----------VYPTWLHEDATGILKSFMTKNPTM  265 (353)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC----------CCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             ccCCCcchHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCC----------CCCCCCCHHHHHHHHHHhhhCHHH
Confidence            999999999999999999999755421        12222222211          111123356788999999999999


Q ss_pred             CCCC
Q 022858          138 MPSM  141 (291)
Q Consensus       138 RPs~  141 (291)
                      ||++
T Consensus       266 R~~~  269 (353)
T 3txo_A          266 RLGS  269 (353)
T ss_dssp             STTS
T ss_pred             ccCC
Confidence            9998

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.88  E-value=4.4e-24  Score=190.53  Aligned_cols=126  Identities=21%  Similarity=0.243  Sum_probs=97.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC--C-----------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--W-----------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~--~-----------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.||+.||+|||+   .+|+||||||+|||++.+.  .                       |+.|+|||++.+..++
T Consensus       152 ~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  228 (387)
T 1kob_A          152 INYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVG  228 (387)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBC
T ss_pred             HHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCC
Confidence            5689999999999999   9999999999999997431  1                       7889999999998999


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++|||||||++|||++|..||......       . ....+......      ............+.+++.+||+.||+
T Consensus       229 ~~~DiwSlG~il~elltg~~Pf~~~~~~-------~-~~~~i~~~~~~------~~~~~~~~~s~~~~~li~~~L~~dP~  294 (387)
T 1kob_A          229 FYTDMWAIGVLGYVLLSGLSPFAGEDDL-------E-TLQNVKRCDWE------FDEDAFSSVSPEAKDFIKNLLQKEPR  294 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCSSCCSSHH-------H-HHHHHHHCCCC------CCSSTTTTSCHHHHHHHHTTSCSSGG
T ss_pred             CcccEeeHhHHHHHHHhCCCCCCCCCHH-------H-HHHHHHhCCCC------CCccccccCCHHHHHHHHHHcCCChh
Confidence            9999999999999999999999754321       1 11111111110      00111122346788999999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +||++.|+
T Consensus       295 ~Rpt~~el  302 (387)
T 1kob_A          295 KRLTVHDA  302 (387)
T ss_dssp             GSCCHHHH
T ss_pred             HCcCHHHH
Confidence            99999999

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.88  E-value=4e-24  Score=188.43  Aligned_cols=118  Identities=19%  Similarity=0.228  Sum_probs=94.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCccccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                     |+.|+|||++.+..++.++|
T Consensus       144 ~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  220 (350)
T 1rdq_E          144 RFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVD  220 (350)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCCcccccCCccccCHHHhcCCCCCCcCC
Confidence            4688999999999999   99999999999999987653                     78999999999989999999


Q ss_pred             eechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCC
Q 022858           61 VRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPS  140 (291)
Q Consensus        61 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs  140 (291)
                      ||||||++|||++|..||......        .....+..+..          ..+......+.+++.+||+.||.+||+
T Consensus       221 iwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~~~----------~~p~~~~~~~~~li~~lL~~dp~~R~~  282 (350)
T 1rdq_E          221 WWALGVLIYEMAAGYPPFFADQPI--------QIYEKIVSGKV----------RFPSHFSSDLKDLLRNLLQVDLTKRFG  282 (350)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC----------CCCTTCCHHHHHHHHHHSCSCTTTCTT
T ss_pred             EecccHhHhHHhhCCCCCCCCCHH--------HHHHHHHcCCC----------CCCCCCCHHHHHHHHHHhhcCHHhccC
Confidence            999999999999999999754321        12222222211          111223467889999999999999998

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.88  E-value=9.6e-25  Score=207.06  Aligned_cols=132  Identities=22%  Similarity=0.213  Sum_probs=104.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                         ++.|+|||.+.+..++
T Consensus       494 ~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  570 (656)
T 2j0j_A          494 ILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT  570 (656)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCC
Confidence            4688999999999999   99999999999999986542                         4679999999888999


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++||||||+++|||++ |..||......        .....+..+..         .+.+..++..+.+++.+||+.||
T Consensus       571 ~~~DiwSlG~il~ellt~g~~Pf~~~~~~--------~~~~~i~~~~~---------~~~~~~~~~~l~~li~~~l~~dP  633 (656)
T 2j0j_A          571 SASDVWMFGVCMWEILMHGVKPFQGVKNN--------DVIGRIENGER---------LPMPPNCPPTLYSLMTKCWAYDP  633 (656)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHHTCC---------CCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             chhhHHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHcCCC---------CCCCccccHHHHHHHHHHcCCCh
Confidence            99999999999999997 99998654321        11122222111         11223345678899999999999


Q ss_pred             CCCCCCCccchhhhhhcccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ++||++.++  ++.|+.+..
T Consensus       634 ~~RPs~~el--~~~L~~il~  651 (656)
T 2j0j_A          634 SRRPRFTEL--KAQLSTILE  651 (656)
T ss_dssp             GGSCCHHHH--HHHHHHHHH
T ss_pred             hHCcCHHHH--HHHHHHHHH
Confidence            999999999  999887654

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.88  E-value=4.9e-24  Score=190.30  Aligned_cols=78  Identities=29%  Similarity=0.392  Sum_probs=69.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------------------   40 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------------------   40 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                                         
T Consensus       112 ~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (388)
T 3oz6_A          112 QYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT  188 (388)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC--------------
T ss_pred             HHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCccccccccccccccccccccccccccccccccccc
Confidence            3578899999999999   99999999999999986532                                         


Q ss_pred             ----CCccccCccccC-CCCccccceechhHHHHHHhhCCCcccccc
Q 022858           41 ----TPGYAAPETWMS-FPVTHKCDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        41 ----t~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                          |+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus       189 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  235 (388)
T 3oz6_A          189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS  235 (388)
T ss_dssp             -CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             CCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                456999999886 578999999999999999999999997554

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.88  E-value=1.4e-24  Score=188.36  Aligned_cols=135  Identities=21%  Similarity=0.247  Sum_probs=99.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccC-
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMS-   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~-   52 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.+..                            ++.|+|||.+.. 
T Consensus       133 ~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  209 (319)
T 2y4i_B          133 RQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQL  209 (319)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC--CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCB
T ss_pred             HHHHHHHHHHHHHHHh---CCccccCCChhhEEEeCCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhc
Confidence            5789999999999999   99999999999999984311                            567999999874 


Q ss_pred             --------CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHH
Q 022858           53 --------FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMA  124 (291)
Q Consensus        53 --------~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (291)
                              ..++.++||||||+++|||++|+.||......        ........+......        .......+.
T Consensus       210 ~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~--------~~~~~~~l~  273 (319)
T 2y4i_B          210 SPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--------AIIWQMGTGMKPNLS--------QIGMGKEIS  273 (319)
T ss_dssp             SCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH--------HHHHHHHTTCCCCCC--------CSSCCTTHH
T ss_pred             cccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHhccCCCCCCC--------cCCCCHHHH
Confidence                    35788999999999999999999998654321        112222222111110        111235688


Q ss_pred             HHHHHccccCCCCCCCCCccchhhhhhcccccc
Q 022858          125 LVALWRVQYKPEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       125 ~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      +++.+||+.||++||++.++  ++.|+.+....
T Consensus       274 ~li~~~l~~~p~~Rpt~~~l--~~~l~~l~~~~  304 (319)
T 2y4i_B          274 DILLFCWAFEQEERPTFTKL--MDMLEKLPKRN  304 (319)
T ss_dssp             HHHHHHHCSSTTTSCCHHHH--HHHHTTC----
T ss_pred             HHHHHHhcCChhhCcCHHHH--HHHHHHHHHhh
Confidence            99999999999999999999  99999887643

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.88  E-value=2.7e-23  Score=181.89  Aligned_cols=130  Identities=21%  Similarity=0.280  Sum_probs=99.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||++.+..++.
T Consensus       144 ~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  220 (335)
T 2owb_A          144 RYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF  220 (335)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCT
T ss_pred             HHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCc
Confidence            5789999999999999   99999999999999987643                        67799999999888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|+.||......       + ....+.....          ..+......+.+++.+||+.||++
T Consensus       221 ~~Di~slG~il~~l~~g~~pf~~~~~~-------~-~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~dp~~  282 (335)
T 2owb_A          221 EVDVWSIGCIMYTLLVGKPPFETSCLK-------E-TYLRIKKNEY----------SIPKHINPVAASLIQKMLQTDPTA  282 (335)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTCCSSHH-------H-HHHHHHHTCC----------CCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             hhhHHHHHHHHHHHHHCcCCCCCCCHH-------H-HHHHHhcCCC----------CCCccCCHHHHHHHHHHccCChhH
Confidence            999999999999999999998654321       1 1111111111          011122356788999999999999


Q ss_pred             CCCCCccchhhhhhc
Q 022858          138 MPSMTVRPAKFMLHG  152 (291)
Q Consensus       138 RPs~~~v~~~~~L~~  152 (291)
                      ||++.|+.....+..
T Consensus       283 Rps~~ell~~~~~~~  297 (335)
T 2owb_A          283 RPTINELLNDEFFTS  297 (335)
T ss_dssp             SCCGGGGGGSHHHHT
T ss_pred             CcCHHHHhcCccccC
Confidence            999999933334543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.88  E-value=2.5e-24  Score=192.81  Aligned_cols=148  Identities=16%  Similarity=0.079  Sum_probs=107.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEE----ccCC-----------------------CCCccccCccccC--
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILL----DVKF-----------------------WTPGYAAPETWMS--   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll----~~~~-----------------------~t~~y~aPE~~~~--   52 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||+    +.+.                       +|+.|+|||++.+  
T Consensus       115 ~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~  191 (396)
T 4eut_A          115 LIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAV  191 (396)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccc
Confidence            5689999999999999   999999999999998    4331                       1789999998864  


Q ss_pred             ------CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC---ccchhh-----------hhccc
Q 022858           53 ------FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG---EFQDLI-----------IVCGM  112 (291)
Q Consensus        53 ------~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----------~~~~~  112 (291)
                            ..++.++|||||||++|||++|+.||.........   .+.........   .+....           +....
T Consensus       192 ~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  268 (396)
T 4eut_A          192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN---KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVS  268 (396)
T ss_dssp             C--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC---HHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTT
T ss_pred             cccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch---HHHHHHHhcCCCcccchhheeccCCCcccCccCCcc
Confidence                  46788999999999999999999999755432221   12122211110   000000           00011


Q ss_pred             ccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcccccc
Q 022858          113 EKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       113 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      ..........+.+++.+||+.||++||++.++  ++.++.+....
T Consensus       269 ~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~--l~~l~~il~~~  311 (396)
T 4eut_A          269 CSLSRGLQVLLTPVLANILEADQEKCWGFDQF--FAETSDILHRM  311 (396)
T ss_dssp             CSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHH--HHHHHHHHTCE
T ss_pred             cccchHHHhhchHHHHHhhccChhhhccHHHH--HHHHHHHhhce
Confidence            22346677888999999999999999999999  99888776543

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.88  E-value=5.5e-24  Score=189.01  Aligned_cols=122  Identities=21%  Similarity=0.227  Sum_probs=96.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||++.+..++.
T Consensus       142 ~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  218 (373)
T 2r5t_A          142 RFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDR  218 (373)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCT
T ss_pred             HHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCc
Confidence            3578999999999999   99999999999999986543                        78899999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|..||......        .....+.....          ..+......+.+++.+||+.||.+
T Consensus       219 ~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~~~----------~~~~~~~~~~~~li~~lL~~dp~~  280 (373)
T 2r5t_A          219 TVDWWCLGAVLYEMLYGLPPFYSRNTA--------EMYDNILNKPL----------QLKPNITNSARHLLEGLLQKDRTK  280 (373)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTCCSBHH--------HHHHHHHHSCC----------CCCSSSCHHHHHHHHHHTCSSGGG
T ss_pred             hhhhHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHhccc----------CCCCCCCHHHHHHHHHHcccCHHh
Confidence            999999999999999999999754321        12222221111          011123356788999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.+.
T Consensus       281 R~~~~~~  287 (373)
T 2r5t_A          281 RLGAKDD  287 (373)
T ss_dssp             STTTTTT
T ss_pred             CCCCCCC
Confidence            9999755

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.88  E-value=5.7e-24  Score=183.38  Aligned_cols=131  Identities=21%  Similarity=0.255  Sum_probs=98.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCC-
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFP-   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~-   54 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||++.+.. 
T Consensus       112 ~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  188 (305)
T 2wtk_C          112 HGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDT  188 (305)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSC
T ss_pred             HHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCccc
Confidence            4688999999999999   99999999999999986542                          67899999987643 


Q ss_pred             -CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 -VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 -~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                       ++.++||||||+++|||++|..||.....        ......+..+..          ..+..+...+.+++.+|++.
T Consensus       189 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~i~~~~~----------~~~~~~~~~l~~li~~~l~~  250 (305)
T 2wtk_C          189 FSGFKVDIWSAGVTLYNITTGLYPFEGDNI--------YKLFENIGKGSY----------AIPGDCGPPLSDLLKGMLEY  250 (305)
T ss_dssp             EESHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHCCC----------CCCSSSCHHHHHHHHHHTCS
T ss_pred             CCcchhhHHHHHHHHHHHHhCCCCCCCchH--------HHHHHHHhcCCC----------CCCCccCHHHHHHHHHHccC
Confidence             47799999999999999999999875432        112222222111          11122346778999999999


Q ss_pred             CCCCCCCCCccchhhhhhcc
Q 022858          134 KPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~  153 (291)
                      ||++||++.++.....+...
T Consensus       251 dp~~Rps~~~ll~~~~~~~~  270 (305)
T 2wtk_C          251 EPAKRFSIRQIRQHSWFRKK  270 (305)
T ss_dssp             STTTSCCHHHHHHSHHHHSC
T ss_pred             ChhhCCCHHHHhcCcccccC
Confidence            99999999999333445444

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.88  E-value=2.7e-24  Score=188.43  Aligned_cols=138  Identities=21%  Similarity=0.240  Sum_probs=85.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.+..                         ++.|+|||.+.+..++
T Consensus       131 ~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  207 (336)
T 3fhr_A          131 AEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYD  207 (336)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC----------------------CHHH
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEeccccceeccccccccCCCCcCccChhhhCCCCCC
Confidence            5789999999999999   99999999999999975321                         7789999999888899


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++||||||+++|||++|..||............    ......+..      .............+.+++.+||+.||.
T Consensus       208 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----~~~~~~~~~------~~~~~~~~~~~~~~~~li~~~L~~dP~  277 (336)
T 3fhr_A          208 KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM----KRRIRLGQY------GFPNPEWSEVSEDAKQLIRLLLKTDPT  277 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCC-------------------------------CCCTTTSTTCCHHHHHHHHHHSCSSGG
T ss_pred             chhhHHHHHHHHHHHHHCCCCCCCccchhhhhhH----HHhhhcccc------ccCchhhccCCHHHHHHHHHHCCCChh
Confidence            9999999999999999999999765432111100    001100000      000111123346788999999999999


Q ss_pred             CCCCCCccchhhhhhc
Q 022858          137 AMPSMTVRPAKFMLHG  152 (291)
Q Consensus       137 ~RPs~~~v~~~~~L~~  152 (291)
                      +|||+.|+.....+.+
T Consensus       278 ~Rpt~~ell~hp~~~~  293 (336)
T 3fhr_A          278 ERLTITQFMNHPWINQ  293 (336)
T ss_dssp             GSCCHHHHHHSHHHHT
T ss_pred             HCcCHHHHhcCccccc
Confidence            9999999933334544

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.88  E-value=1e-23  Score=187.83  Aligned_cols=125  Identities=24%  Similarity=0.273  Sum_probs=95.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccC---CCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMS---FPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~---~~~   55 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                       |+.|+|||++..   ..+
T Consensus       118 ~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~  194 (384)
T 4fr4_A          118 KLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGY  194 (384)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCB
T ss_pred             HHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCC
Confidence            4688999999999999   99999999999999987643                       788999999874   458


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++|||||||++|||++|+.||......     ........+....          ...+......+.+++.+||+.||
T Consensus       195 ~~~~DiwSlG~il~elltG~~Pf~~~~~~-----~~~~~~~~~~~~~----------~~~p~~~s~~~~~li~~lL~~dP  259 (384)
T 4fr4_A          195 SFAVDWWSLGVTAYELLRGRRPYHIRSST-----SSKEIVHTFETTV----------VTYPSAWSQEMVSLLKKLLEPNP  259 (384)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCCTTS-----CHHHHHHHHHHCC----------CCCCTTSCHHHHHHHHHHSCSSG
T ss_pred             CccceeechHHHHHHHHhCCCCCCCCCCc-----cHHHHHHHHhhcc----------cCCCCcCCHHHHHHHHHHhcCCH
Confidence            99999999999999999999999754322     1111111111111          11122334678899999999999


Q ss_pred             CCCCC-CCcc
Q 022858          136 EAMPS-MTVR  144 (291)
Q Consensus       136 ~~RPs-~~~v  144 (291)
                      .+||+ +.++
T Consensus       260 ~~R~s~~~~l  269 (384)
T 4fr4_A          260 DQRFSQLSDV  269 (384)
T ss_dssp             GGSCCSHHHH
T ss_pred             hHhcccHHHH
Confidence            99998 4555

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.88  E-value=1.7e-24  Score=193.83  Aligned_cols=145  Identities=17%  Similarity=0.157  Sum_probs=99.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEc-cCCC-----------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD-VKFW-----------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~-~~~~-----------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++ .++.                       |+.|+|||.+.+. .++
T Consensus       144 ~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  220 (394)
T 4e7w_A          144 KLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYT  220 (394)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCC
T ss_pred             HHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCC
Confidence            4678999999999999   9999999999999998 3321                       6779999998765 589


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---------------CccchhhhhcccccchHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---------------GEFQDLIIVCGMEKNNKEKAE  121 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~  121 (291)
                      .++||||+||++|||++|+.||.......    ....+......               ..+..................
T Consensus       221 ~~~DiwSlG~il~ell~g~~pf~~~~~~~----~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (394)
T 4e7w_A          221 TNIDIWSTGCVMAELMQGQPLFPGESGID----QLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPP  296 (394)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCH
Confidence            99999999999999999999997654220    01111111000               000000000000001112346


Q ss_pred             HHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          122 RMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       122 ~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      .+.+++.+||+.||.+|||+.|+.....+.+.
T Consensus       297 ~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (394)
T 4e7w_A          297 DAIDLISRLLEYTPSARLTAIEALCHPFFDEL  328 (394)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred             HHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence            78999999999999999999999333345544

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.88  E-value=7.8e-24  Score=186.20  Aligned_cols=128  Identities=19%  Similarity=0.246  Sum_probs=95.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||++.+..++.
T Consensus       113 ~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  189 (345)
T 3a8x_A          113 RFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGF  189 (345)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCCCCh
Confidence            4678999999999999   99999999999999986643                        77899999999989999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCC-CchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGF-PSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      ++|||||||++|||++|+.||......... ..........+.....          ..+......+.+++.+||+.||.
T Consensus       190 ~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~----------~~p~~~s~~~~~li~~lL~~dP~  259 (345)
T 3a8x_A          190 SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----------RIPRSLSVKAASVLKSFLNKDPK  259 (345)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC----------CCCTTSCHHHHHHHHHHTCSSTT
T ss_pred             HHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC----------CCCCCCCHHHHHHHHHHhcCCHh
Confidence            999999999999999999999653221110 0112222222222111          11122346788899999999999


Q ss_pred             CCCCCC
Q 022858          137 AMPSMT  142 (291)
Q Consensus       137 ~RPs~~  142 (291)
                      +||++.
T Consensus       260 ~R~~~~  265 (345)
T 3a8x_A          260 ERLGCH  265 (345)
T ss_dssp             TSTTCC
T ss_pred             HCCCCC
Confidence            999973

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.88  E-value=6.5e-24  Score=180.63  Aligned_cols=134  Identities=17%  Similarity=0.181  Sum_probs=98.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEE---ccCCC-----------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILL---DVKFW-----------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll---~~~~~-----------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||+   +.+..                       ++.|+|||.+.+ .+
T Consensus       109 ~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~  184 (277)
T 3f3z_A          109 ARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG-LY  184 (277)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CB
T ss_pred             HHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCCCccChHHhcc-cC
Confidence            5789999999999999   999999999999999   43321                       778999998865 48


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||||+++|||++|..||......        .....+..+......      .........+.+++.+|++.||
T Consensus       185 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~dp  250 (277)
T 3f3z_A          185 GPECDEWSAGVMMYVLLCGYPPFSAPTDS--------EVMLKIREGTFTFPE------KDWLNVSPQAESLIRRLLTKSP  250 (277)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCH------HHHTTSCHHHHHHHHHHTCSST
T ss_pred             CchhhehhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhCCCCCCc------hhhhcCCHHHHHHHHHHccCCh
Confidence            99999999999999999999999654321        122222222111000      0001234678899999999999


Q ss_pred             CCCCCCCccchhhhhhcc
Q 022858          136 EAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~  153 (291)
                      ++||++.++.....+++.
T Consensus       251 ~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          251 KQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             TTSCCHHHHTTSHHHHHH
T ss_pred             hhCcCHHHHhcCHHHhcc
Confidence            999999999333445443

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.88  E-value=4.7e-24  Score=187.12  Aligned_cols=135  Identities=21%  Similarity=0.123  Sum_probs=99.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC--C----------------------------CCccccCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--W----------------------------TPGYAAPETWM   51 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~--~----------------------------t~~y~aPE~~~   51 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.+.  .                            |+.|+|||.+.
T Consensus       171 ~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  247 (345)
T 3hko_A          171 SNIMRQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLN  247 (345)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhc
Confidence            3589999999999999   9999999999999997543  1                            67799999987


Q ss_pred             C--CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHH
Q 022858           52 S--FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALW  129 (291)
Q Consensus        52 ~--~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  129 (291)
                      +  ..++.++||||||+++|||++|+.||......       +.............       .+........+.+++.+
T Consensus       248 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~  313 (345)
T 3hko_A          248 TTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA-------DTISQVLNKKLCFE-------NPNYNVLSPLARDLLSN  313 (345)
T ss_dssp             CSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCCTT-------SGGGGGSCHHHHHHHHH
T ss_pred             cCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChH-------HHHHHHHhcccccC-------CcccccCCHHHHHHHHH
Confidence            5  67889999999999999999999999654421       11122221111000       11111234678899999


Q ss_pred             ccccCCCCCCCCCccchhhhhhcc
Q 022858          130 RVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       130 cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      ||+.||.+||++.++.....+.+.
T Consensus       314 ~l~~~p~~Rps~~~~l~hp~~~~~  337 (345)
T 3hko_A          314 LLNRNVDERFDAMRALQHPWISQF  337 (345)
T ss_dssp             HSCSCTTTSCCHHHHHHSHHHHTT
T ss_pred             HcCCChhHCCCHHHHhcChhhccC
Confidence            999999999999999333344443

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.88  E-value=7.1e-24  Score=185.03  Aligned_cols=134  Identities=21%  Similarity=0.263  Sum_probs=100.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc---CCC-----------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV---KFW-----------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~---~~~-----------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.   ++.                       ++.|+|||++.+..+
T Consensus       134 ~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  210 (327)
T 3lm5_A          134 IRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPI  210 (327)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCC
Confidence            5789999999999999   99999999999999987   221                       788999999999899


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||||+++|||++|+.||......        .....+......      ............+.+++.+||+.||
T Consensus       211 ~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~------~~~~~~~~~~~~~~~li~~~L~~dP  276 (327)
T 3lm5_A          211 TTATDMWNIGIIAYMLLTHTSPFVGEDNQ--------ETYLNISQVNVD------YSEETFSSVSQLATDFIQSLLVKNP  276 (327)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCC------CCTTTTTTSCHHHHHHHHHHSCSSG
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCch--------HHHHHHHhcccc------cCchhhcccCHHHHHHHHHHcCCCh
Confidence            99999999999999999999999654321        111111111100      0011112334678899999999999


Q ss_pred             CCCCCCCccchhhhhhc
Q 022858          136 EAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~  152 (291)
                      ++||++.++.....++.
T Consensus       277 ~~Rpt~~~ll~h~~~~~  293 (327)
T 3lm5_A          277 EKRPTAEICLSHSWLQQ  293 (327)
T ss_dssp             GGSCCHHHHTTCGGGCC
T ss_pred             hhCcCHHHHhCCHhhcc
Confidence            99999999943444544

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.88  E-value=1.1e-24  Score=188.48  Aligned_cols=146  Identities=17%  Similarity=0.147  Sum_probs=100.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||.+.+ ..++
T Consensus       105 ~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  181 (311)
T 4agu_A          105 KSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYG  181 (311)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCC
T ss_pred             HHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCC
Confidence            4688999999999999   99999999999999986543                        667999999876 5789


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHh-----------hcCccc---hhhhhccccc---chHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKL-----------EKGEFQ---DLIIVCGMEK---NNKEK  119 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~---~~~~~~~~~~---~~~~~  119 (291)
                      .++||||||+++|||++|..||.......    ....+....           ......   ...++.....   .....
T Consensus       182 ~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (311)
T 4agu_A          182 PPVDVWAIGCVFAELLSGVPLWPGKSDVD----QLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNI  257 (311)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTC
T ss_pred             cchhhHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccc
Confidence            99999999999999999999996554321    011111100           000000   0000000000   01123


Q ss_pred             HHHHHHHHHHccccCCCCCCCCCccchhhhhhccc
Q 022858          120 AERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       120 ~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~  154 (291)
                      ...+.+++.+||+.||++|||+.|+.....+++..
T Consensus       258 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  292 (311)
T 4agu_A          258 SYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIR  292 (311)
T ss_dssp             CHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             cHHHHHHHHHHccCChhhcCCHHHHhcChHHHhcc
Confidence            45688999999999999999999994444455443

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.88  E-value=9.3e-24  Score=183.69  Aligned_cols=122  Identities=25%  Similarity=0.282  Sum_probs=95.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCccccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                     |+.|+|||++.+..++.++|
T Consensus       109 ~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  185 (318)
T 1fot_A          109 KFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSID  185 (318)
T ss_dssp             HHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHH
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCccccccCCccccCHhHhcCCCCCcccc
Confidence            3578999999999999   99999999999999987643                     78999999999989999999


Q ss_pred             eechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC-
Q 022858           61 VRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP-  139 (291)
Q Consensus        61 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-  139 (291)
                      ||||||++|||++|..||......       . ....+..+..          ..+......+.+++.+|++.||.+|| 
T Consensus       186 iwslG~il~ell~g~~pf~~~~~~-------~-~~~~i~~~~~----------~~p~~~~~~~~~li~~lL~~dp~~R~~  247 (318)
T 1fot_A          186 WWSFGILIYEMLAGYTPFYDSNTM-------K-TYEKILNAEL----------RFPPFFNEDVKDLLSRLITRDLSQRLG  247 (318)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSSHH-------H-HHHHHHHCCC----------CCCTTSCHHHHHHHHHHTCSCTTTCTT
T ss_pred             hhhhHHHHHHHHhCCCCCCCCCHH-------H-HHHHHHhCCC----------CCCCCCCHHHHHHHHHHhccCHHHcCC
Confidence            999999999999999999654321       1 1122211111          11112335778899999999999999 


Q ss_pred             ----CCCcc
Q 022858          140 ----SMTVR  144 (291)
Q Consensus       140 ----s~~~v  144 (291)
                          ++.++
T Consensus       248 ~~~~~~~~i  256 (318)
T 1fot_A          248 NLQNGTEDV  256 (318)
T ss_dssp             SSTTTTHHH
T ss_pred             CcCCCHHHH
Confidence                66666

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.88  E-value=9.3e-24  Score=186.23  Aligned_cols=119  Identities=22%  Similarity=0.287  Sum_probs=94.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||++.+..++.
T Consensus       124 ~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  200 (353)
T 2i0e_A          124 VFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGK  200 (353)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBST
T ss_pred             HHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCC
Confidence            4688999999999999   99999999999999986643                        77899999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......        .+...+..+..          ..+......+.+++.+||+.||.+
T Consensus       201 ~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~~~----------~~p~~~s~~~~~li~~lL~~dP~~  262 (353)
T 2i0e_A          201 SVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIMEHNV----------AYPKSMSKEAVAICKGLMTKHPGK  262 (353)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC----------CCCTTSCHHHHHHHHHHTCSCTTS
T ss_pred             cccccchHHHHHHHHcCCCCCCCCCHH--------HHHHHHHhCCC----------CCCCCCCHHHHHHHHHHhhcCHHH
Confidence            999999999999999999999754321        12222222111          111223467889999999999999


Q ss_pred             CCCC
Q 022858          138 MPSM  141 (291)
Q Consensus       138 RPs~  141 (291)
                      ||++
T Consensus       263 R~~~  266 (353)
T 2i0e_A          263 RLGC  266 (353)
T ss_dssp             CTTC
T ss_pred             cCCC
Confidence            9976

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.88  E-value=2.7e-23  Score=177.99  Aligned_cols=124  Identities=19%  Similarity=0.237  Sum_probs=94.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCC--eEeecCCCCcEEEc-cCCC----------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQ--IIHYNIKPENILLD-VKFW----------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~--ivH~Dlkp~NIll~-~~~~----------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.|+.|++.||+|||+   .+  |+||||||+|||++ .++.                      ++.|+|||.+.+ .++
T Consensus       132 ~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~  207 (290)
T 1t4h_A          132 RSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYD  207 (290)
T ss_dssp             HHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCC
T ss_pred             HHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccccccCCcCcCCHHHHhc-cCC
Confidence            5689999999999999   77  99999999999997 3322                      788999998764 589


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++||||||+++|+|++|+.||.....       ..........+......        +......+.+++.+||+.||+
T Consensus       208 ~~~Di~slG~~l~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~--------~~~~~~~l~~li~~~l~~dp~  272 (290)
T 1t4h_A          208 ESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRRVTSGVKPASF--------DKVAIPEVKEIIEGCIRQNKD  272 (290)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHHHTTTCCCGGG--------GGCCCHHHHHHHHHHSCSSGG
T ss_pred             CcchHHHHHHHHHHHHhCCCCCCCcCc-------HHHHHHHHhccCCcccc--------CCCCCHHHHHHHHHHccCChh
Confidence            999999999999999999999865332       11222222222211111        111235688999999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +||++.++
T Consensus       273 ~Rps~~el  280 (290)
T 1t4h_A          273 ERYSIKDL  280 (290)
T ss_dssp             GSCCHHHH
T ss_pred             hCCCHHHH
Confidence            99999998

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.88  E-value=3.8e-23  Score=183.55  Aligned_cols=146  Identities=14%  Similarity=0.143  Sum_probs=102.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccC-CCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMS-FPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~-~~~~~~~   59 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.++.                     |+.|+|||.+.+ ..++.++
T Consensus       147 ~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~  223 (371)
T 4exu_A          147 QYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTV  223 (371)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCCTTH
T ss_pred             HHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCCcHH
Confidence            4688999999999999   99999999999999987643                     788999999887 6789999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC-----------ccchhhhh--cccc----cchHHHHHH
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG-----------EFQDLIIV--CGME----KNNKEKAER  122 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~--~~~~----~~~~~~~~~  122 (291)
                      |||||||++|||++|+.||......+    ....+.......           ........  ....    .........
T Consensus       224 DiwslG~il~el~~g~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (371)
T 4exu_A          224 DIWSVGCIMAEMLTGKTLFKGKDYLD----QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQ  299 (371)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChH
Confidence            99999999999999999997543210    011110000000           00000000  0000    001123467


Q ss_pred             HHHHHHHccccCCCCCCCCCccchhhhhhccc
Q 022858          123 MALVALWRVQYKPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       123 ~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~  154 (291)
                      +.+++.+||+.||++|||+.|+.....++...
T Consensus       300 ~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  331 (371)
T 4exu_A          300 AADLLEKMLELDVDKRLTAAQALTHPFFEPFR  331 (371)
T ss_dssp             HHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHHHHCCCChhhcCCHHHHhcCcccccCC
Confidence            88999999999999999999994444565443

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.88  E-value=2.1e-24  Score=187.88  Aligned_cols=145  Identities=17%  Similarity=0.187  Sum_probs=101.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                       ++.|+|||.+.+..++.+
T Consensus       123 ~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  199 (326)
T 1blx_A          123 KDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATP  199 (326)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTH
T ss_pred             HHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcc
Confidence            5689999999999999   99999999999999986643                       778999999998899999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---Cccchh------h----hhcccccchHHHHHHHHH
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---GEFQDL------I----IVCGMEKNNKEKAERMAL  125 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------~----~~~~~~~~~~~~~~~~~~  125 (291)
                      +||||||+++|||++|+.||......    .....+......   ..+...      .    ...............+.+
T Consensus       200 ~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (326)
T 1blx_A          200 VDLWSVGCIFAEMFRRKPLFRGSSDV----DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKD  275 (326)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHH
T ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHH
Confidence            99999999999999999999755421    011111111100   000000      0    000001111233467789


Q ss_pred             HHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          126 VALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      ++.+||+.||++||++.++.....+...
T Consensus       276 li~~~L~~dP~~Rpt~~e~l~hp~~~~~  303 (326)
T 1blx_A          276 LLLKCLTFNPAKRISAYSALSHPYFQDL  303 (326)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             HHHHHcCCCcccCCCHHHHhcCcccccc
Confidence            9999999999999999999322445444

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.88  E-value=1.5e-23  Score=189.06  Aligned_cols=127  Identities=24%  Similarity=0.269  Sum_probs=94.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccC---
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMS---   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~---   52 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.+..                          |+.|+|||++.+   
T Consensus       242 ~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  318 (419)
T 3i6u_A          242 KLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT  318 (419)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------CTTCCTTTTC----
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEeecccceecCCCccccccCCCCCccCceeeecCCC
Confidence            4688999999999999   99999999999999964321                          789999999863   


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++|||||||++|||++|..||......   ..+    ...+..+......      .........+.+++.+||+
T Consensus       319 ~~~~~~~DiwslG~il~~lltg~~pf~~~~~~---~~~----~~~i~~~~~~~~~------~~~~~~~~~~~~li~~~L~  385 (419)
T 3i6u_A          319 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ---VSL----KDQITSGKYNFIP------EVWAEVSEKALDLVKKLLV  385 (419)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS---CCH----HHHHHTTCCCCCH------HHHTTSCHHHHHHHHHHSC
T ss_pred             CCCCchhhhHhHHHHHHHHHHCCCCCCCCcch---HHH----HHHHhcCCCCCCc------hhhcccCHHHHHHHHHHcc
Confidence            57889999999999999999999999754322   111    1122222111100      0011234678899999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .||++||++.|+
T Consensus       386 ~dP~~Rps~~e~  397 (419)
T 3i6u_A          386 VDPKARFTTEEA  397 (419)
T ss_dssp             SSTTTSCCHHHH
T ss_pred             CChhHCcCHHHH
Confidence            999999999998

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.88  E-value=1.1e-23  Score=185.82  Aligned_cols=146  Identities=18%  Similarity=0.150  Sum_probs=100.9

Q ss_pred             hhHHHHHHHHHHHHh--cCCCCCeEeecCCCCcEEEcc-CCC-----------------------CCccccCccccCC-C
Q 022858            2 HIIAIGTAEGIVSLH--DGCQQQIIHYNIKPENILLDV-KFW-----------------------TPGYAAPETWMSF-P   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH--~~~~~~ivH~Dlkp~NIll~~-~~~-----------------------t~~y~aPE~~~~~-~   54 (291)
                      ..++.|++.||.|||  +   .+|+||||||+|||++. ++.                       |+.|+|||++.+. .
T Consensus       132 ~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  208 (360)
T 3e3p_A          132 KVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQH  208 (360)
T ss_dssp             HHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSS
T ss_pred             HHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCC
Confidence            467899999999999  7   99999999999999986 321                       7789999998765 4


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhh-----------cC-ccchhhhh------cccccch
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLE-----------KG-EFQDLIIV------CGMEKNN  116 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~------~~~~~~~  116 (291)
                      ++.++|||||||++|||++|+.||.......    ....+.....           .. ......+.      .......
T Consensus       209 ~~~~~Di~slG~il~ell~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (360)
T 3e3p_A          209 YTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG----QLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHS  284 (360)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCC
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCcCCCChHH----HHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhh
Confidence            8999999999999999999999997654221    1111111000           00 00000000      0001111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhccc
Q 022858          117 KEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       117 ~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~  154 (291)
                      ......+.+++.+||+.||.+|||+.|+.....+.+..
T Consensus       285 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          285 LKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             CTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             ccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence            12356789999999999999999999994444565543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.88  E-value=7.8e-24  Score=192.46  Aligned_cols=131  Identities=16%  Similarity=0.192  Sum_probs=99.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+.  .+|+||||||+|||++.++.                        |+.|+|||++.+..++.
T Consensus       251 ~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  328 (446)
T 4ejn_A          251 RFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGR  328 (446)
T ss_dssp             HHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCT
T ss_pred             HHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCC
Confidence            46889999999999962  78999999999999986643                        78999999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......        .....+.....          ..+......+.+++.+||+.||.+
T Consensus       329 ~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~~~----------~~p~~~~~~~~~li~~~L~~dP~~  390 (446)
T 4ejn_A          329 AVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEEI----------RFPRTLGPEAKSLLSGLLKKDPKQ  390 (446)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC----------CCCTTSCHHHHHHHHHHTCSSTTT
T ss_pred             ccchhhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHHhCCC----------CCCccCCHHHHHHHHHHcccCHHH
Confidence            999999999999999999999654321        11112111111          111223467889999999999999


Q ss_pred             CC-----CCCccchhhhhhc
Q 022858          138 MP-----SMTVRPAKFMLHG  152 (291)
Q Consensus       138 RP-----s~~~v~~~~~L~~  152 (291)
                      ||     ++.|+.....+.+
T Consensus       391 R~~~~~~t~~ell~hp~f~~  410 (446)
T 4ejn_A          391 RLGGGSEDAKEIMQHRFFAG  410 (446)
T ss_dssp             STTCSTTTHHHHHTSGGGTT
T ss_pred             hCCCCCCCHHHHHhCccccC
Confidence            99     8777733334444

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=3.1e-23  Score=183.89  Aligned_cols=145  Identities=16%  Similarity=0.169  Sum_probs=101.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccC-CCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMS-FPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~-~~~~~~~   59 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                     |+.|+|||.+.+ ..++.++
T Consensus       131 ~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~  207 (367)
T 1cm8_A          131 QFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTV  207 (367)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTH
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCCChhh
Confidence            4688999999999999   99999999999999987653                     778999999887 6799999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc-----------Cccchhhhh------cccccchHHHHHH
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK-----------GEFQDLIIV------CGMEKNNKEKAER  122 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~------~~~~~~~~~~~~~  122 (291)
                      ||||+||++|||++|+.||.......    ....+......           ......+..      .............
T Consensus       208 DiwslG~il~ell~g~~pf~~~~~~~----~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (367)
T 1cm8_A          208 DIWSVGCIMAEMITGKTLFKGSDHLD----QLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPL  283 (367)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHH
Confidence            99999999999999999997543210    01111100000           000000000      0000111223467


Q ss_pred             HHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          123 MALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       123 ~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      +.+++.+||+.||++|||+.++.....+...
T Consensus       284 ~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~  314 (367)
T 1cm8_A          284 AVNLLEKMLVLDAEQRVTAGEALAHPYFESL  314 (367)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             HHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence            8899999999999999999999333345544

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.88  E-value=2e-24  Score=187.10  Aligned_cols=125  Identities=17%  Similarity=0.165  Sum_probs=93.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-------------------------CCCccccCccccC----
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-------------------------WTPGYAAPETWMS----   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-------------------------~t~~y~aPE~~~~----   52 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++...                         +++.|+|||.+.+    
T Consensus       130 ~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  206 (313)
T 3cek_A          130 KSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS  206 (313)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC--
T ss_pred             HHHHHHHHHHHHHHHH---CCceecCCCcccEEEECCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccc
Confidence            5689999999999999   9999999999999996421                         1778999999875    


Q ss_pred             -------CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHH
Q 022858           53 -------FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMAL  125 (291)
Q Consensus        53 -------~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (291)
                             ..++.++||||||+++|||++|..||......      .........         +......+......+.+
T Consensus       207 ~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~~~~~~~~~---------~~~~~~~~~~~~~~l~~  271 (313)
T 3cek_A          207 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------ISKLHAIID---------PNHEIEFPDIPEKDLQD  271 (313)
T ss_dssp             --------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHHHHHHC---------TTSCCCCCCCSCHHHHH
T ss_pred             cccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH------HHHHHHHHh---------cccccCCcccchHHHHH
Confidence                   46888999999999999999999998643221      111111111         11111111122357888


Q ss_pred             HHHHccccCCCCCCCCCcc
Q 022858          126 VALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v  144 (291)
                      ++.+||+.||++||++.++
T Consensus       272 li~~~l~~dp~~Rps~~el  290 (313)
T 3cek_A          272 VLKCCLKRDPKQRISIPEL  290 (313)
T ss_dssp             HHHHHTCSSTTTSCCHHHH
T ss_pred             HHHHHccCCcccCcCHHHH
Confidence            9999999999999999999

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=8e-24  Score=186.10  Aligned_cols=136  Identities=21%  Similarity=0.250  Sum_probs=96.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||.+.+. .++
T Consensus       115 ~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  191 (346)
T 1ua2_A          115 KAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYG  191 (346)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCC
T ss_pred             HHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCC
Confidence            4689999999999999   99999999999999987643                        7789999998764 588


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---Cccchh------hhhcccccc-----hHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---GEFQDL------IIVCGMEKN-----NKEKAER  122 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------~~~~~~~~~-----~~~~~~~  122 (291)
                      .++|||||||++|||++|.+||......    .....+......   ..+.+.      +........     .......
T Consensus       192 ~~~DiwslG~il~ell~g~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (346)
T 1ua2_A          192 VGVDMWAVGCILAELLLRVPFLPGDSDL----DQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDD  267 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHH
T ss_pred             chhhhHhHHHHHHHHHHCCCCCCCCCHH----HHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHH
Confidence            9999999999999999999998654321    011111111100   000000      000000000     1223467


Q ss_pred             HHHHHHHccccCCCCCCCCCcc
Q 022858          123 MALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       123 ~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +.+++.+|++.||++|||+.|+
T Consensus       268 ~~~li~~~L~~dP~~Rpt~~el  289 (346)
T 1ua2_A          268 LLDLIQGLFLFNPCARITATQA  289 (346)
T ss_dssp             HHHHHHHHHCSSTTTSCCHHHH
T ss_pred             HHHHHHHHhccChhhCCCHHHH
Confidence            8899999999999999999999

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.88  E-value=6.3e-24  Score=181.45  Aligned_cols=130  Identities=18%  Similarity=0.177  Sum_probs=100.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.++.                      ++.|+|||.+.+..++.++
T Consensus       117 ~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  193 (284)
T 2vgo_A          117 ATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKV  193 (284)
T ss_dssp             HHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTH
T ss_pred             HHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCcccccccccCCCCcCCHHHhccCCCCccc
Confidence            5689999999999999   99999999999999986543                      6789999999998999999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      ||||||+++|||++|..||......        .....+.....          ..+......+.+++.+|++.||.+||
T Consensus       194 Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp  255 (284)
T 2vgo_A          194 DLWCAGVLCYEFLVGMPPFDSPSHT--------ETHRRIVNVDL----------KFPPFLSDGSKDLISKLLRYHPPQRL  255 (284)
T ss_dssp             HHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHTTCC----------CCCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             chhhHHHHHHHHHHCCCCCCCCCHh--------HHHHHHhcccc----------CCCCcCCHHHHHHHHHHhhcCHhhCC
Confidence            9999999999999999998654321        11111111111          11122345678899999999999999


Q ss_pred             CCCccchhhhhhc
Q 022858          140 SMTVRPAKFMLHG  152 (291)
Q Consensus       140 s~~~v~~~~~L~~  152 (291)
                      ++.++.....+..
T Consensus       256 s~~~ll~h~~~~~  268 (284)
T 2vgo_A          256 PLKGVMEHPWVKA  268 (284)
T ss_dssp             CHHHHHTCHHHHH
T ss_pred             CHHHHhhCHHHHh
Confidence            9999933334544

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.88  E-value=1.3e-23  Score=188.67  Aligned_cols=78  Identities=27%  Similarity=0.425  Sum_probs=68.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEE----ccCCC---------------------------CCccccCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILL----DVKFW---------------------------TPGYAAPETW   50 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll----~~~~~---------------------------t~~y~aPE~~   50 (291)
                      ..|+.||+.||+|||+   .+|+||||||+|||+    +.++.                           |+.|+|||++
T Consensus       131 ~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  207 (405)
T 3rgf_A          131 KSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL  207 (405)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhh
Confidence            4688999999999999   999999999999999    33221                           7779999999


Q ss_pred             cCC-CCccccceechhHHHHHHhhCCCcccccc
Q 022858           51 MSF-PVTHKCDVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        51 ~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                      .+. .++.++|||||||++|||++|..||....
T Consensus       208 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  240 (405)
T 3rgf_A          208 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  240 (405)
T ss_dssp             TTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred             cCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence            874 58999999999999999999999997554

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.88  E-value=6.9e-24  Score=184.54  Aligned_cols=126  Identities=18%  Similarity=0.207  Sum_probs=97.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC----C-----------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF----W-----------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~----~-----------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++    .                       ++.|+|||.+.+..
T Consensus       118 ~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  194 (321)
T 2a2a_A          118 TSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP  194 (321)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccccccCCCCCccCcccccCCC
Confidence            5789999999999999   9999999999999998665    1                       67899999999889


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||||+++|||++|..||......        .....+...... . ++    .........+.+++.+|++.|
T Consensus       195 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~~~-~-~~----~~~~~~~~~~~~li~~~l~~d  260 (321)
T 2a2a_A          195 LGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANITSVSYD-F-DE----EFFSHTSELAKDFIRKLLVKE  260 (321)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTTCCC-C-CH----HHHTTCCHHHHHHHHTTSCSS
T ss_pred             CCCccccHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhcccc-c-Ch----hhhcccCHHHHHHHHHHcCCC
Confidence            999999999999999999999999654321        111112111110 0 00    001122356889999999999


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |++|||+.|+
T Consensus       261 p~~Rps~~e~  270 (321)
T 2a2a_A          261 TRKRLTIQEA  270 (321)
T ss_dssp             TTTSCCHHHH
T ss_pred             hhhCcCHHHH
Confidence            9999999999

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.88  E-value=4.2e-24  Score=189.86  Aligned_cols=134  Identities=19%  Similarity=0.171  Sum_probs=99.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc--CC-----------------------CCCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV--KF-----------------------WTPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~--~~-----------------------~t~~y~aPE~~~~~~~~   56 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.  ++                       +|+.|+|||++.+..++
T Consensus       190 ~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  266 (373)
T 2x4f_A          190 ILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVS  266 (373)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCC
T ss_pred             HHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCC
Confidence            4678999999999999   99999999999999942  21                       17789999999988999


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++|||||||++|||++|..||......       +.. ..+...... .     ...........+.+++.+||+.||.
T Consensus       267 ~~~DiwslG~il~elltg~~pf~~~~~~-------~~~-~~i~~~~~~-~-----~~~~~~~~~~~~~~li~~~L~~dp~  332 (373)
T 2x4f_A          267 FPTDMWSVGVIAYMLLSGLSPFLGDNDA-------ETL-NNILACRWD-L-----EDEEFQDISEEAKEFISKLLIKEKS  332 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHH-HHHHHTCCC-S-----CSGGGTTSCHHHHHHHHTTSCSSGG
T ss_pred             cHHhHHHHHHHHHHHHhCCCCCCCCCHH-------HHH-HHHHhccCC-C-----ChhhhccCCHHHHHHHHHHcCCChh
Confidence            9999999999999999999999754321       111 111111110 0     0011122346788999999999999


Q ss_pred             CCCCCCccchhhhhhc
Q 022858          137 AMPSMTVRPAKFMLHG  152 (291)
Q Consensus       137 ~RPs~~~v~~~~~L~~  152 (291)
                      +||++.|+.....+..
T Consensus       333 ~Rps~~e~l~hp~~~~  348 (373)
T 2x4f_A          333 WRISASEALKHPWLSD  348 (373)
T ss_dssp             GSCCHHHHHHSHHHHC
T ss_pred             hCCCHHHHhcCcCcCC
Confidence            9999999933334443

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.88  E-value=1.2e-23  Score=190.66  Aligned_cols=127  Identities=23%  Similarity=0.275  Sum_probs=95.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-----------------------------------------C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-----------------------------------------W   40 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-----------------------------------------~   40 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.++                                         +
T Consensus       118 ~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~g  194 (434)
T 2rio_A          118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSG  194 (434)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCC
Confidence            4689999999999999   9999999999999996431                                         1


Q ss_pred             CCccccCccccC-------CCCccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhccc
Q 022858           41 TPGYAAPETWMS-------FPVTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGM  112 (291)
Q Consensus        41 t~~y~aPE~~~~-------~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (291)
                      |+.|+|||++.+       ..++.++|||||||++|||++ |..||......     .    . .+..+... .  +...
T Consensus       195 t~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~----~-~i~~~~~~-~--~~~~  261 (434)
T 2rio_A          195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR-----E----S-NIIRGIFS-L--DEMK  261 (434)
T ss_dssp             CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH-----H----H-HHHHTCCC-C--CCCT
T ss_pred             CCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh-----H----H-HHhcCCCC-c--cccc
Confidence            678999999875       578999999999999999998 89998643221     0    0 11111100 0  0011


Q ss_pred             ccchHHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          113 EKNNKEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       113 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ..........+.+++.+||+.||.+||++.++
T Consensus       262 ~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei  293 (434)
T 2rio_A          262 CLHDRSLIAEATDLISQMIDHDPLKRPTAMKV  293 (434)
T ss_dssp             TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ccccccchHHHHHHHHHHhhCChhhCCCHHHH
Confidence            11234566788999999999999999999999

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.88  E-value=3.8e-24  Score=184.11  Aligned_cols=132  Identities=23%  Similarity=0.207  Sum_probs=95.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------CCccccCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------TPGYAAPETWMS   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------t~~y~aPE~~~~   52 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.++.                             ++.|+|||.+.+
T Consensus       124 ~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (303)
T 2vwi_A          124 ATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQ  200 (303)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhcc
Confidence            5688999999999999   99999999999999986643                             567999999875


Q ss_pred             -CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcc
Q 022858           53 -FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRV  131 (291)
Q Consensus        53 -~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  131 (291)
                       ..++.++||||||+++|||++|+.||......       ........ ......................+.+++.+||
T Consensus       201 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  272 (303)
T 2vwi_A          201 VRGYDFKADIWSFGITAIELATGAAPYHKYPPM-------KVLMLTLQ-NDPPSLETGVQDKEMLKKYGKSFRKMISLCL  272 (303)
T ss_dssp             HHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG-------GHHHHHHT-SSCCCTTC-----CCCCCCCHHHHHHHHHHC
T ss_pred             ccCCCchhhHHHHHHHHHHHHhCCCCCccCchh-------hHHHHHhc-cCCCccccccccchhhhhhhHHHHHHHHHHc
Confidence             46889999999999999999999999754432       11111111 1111100000000111122356788999999


Q ss_pred             ccCCCCCCCCCcc
Q 022858          132 QYKPEAMPSMTVR  144 (291)
Q Consensus       132 ~~~p~~RPs~~~v  144 (291)
                      +.||.+||++.++
T Consensus       273 ~~dp~~Rps~~~l  285 (303)
T 2vwi_A          273 QKDPEKRPTAAEL  285 (303)
T ss_dssp             CSSGGGSCCHHHH
T ss_pred             cCChhhCcCHHHH
Confidence            9999999999999

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.88  E-value=3.3e-24  Score=188.74  Aligned_cols=136  Identities=13%  Similarity=0.131  Sum_probs=95.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccC-
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMS-   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~-   52 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.++.                            |+.|+|||++.+ 
T Consensus       127 ~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  203 (351)
T 3mi9_A          127 KRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE  203 (351)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCC
Confidence            5789999999999999   99999999999999986532                            667999999876 


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---Cccchhhhh---------cccccchHH--
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---GEFQDLIIV---------CGMEKNNKE--  118 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---------~~~~~~~~~--  118 (291)
                      ..++.++|||||||++|||++|..||......    .....+......   .........         ........+  
T Consensus       204 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (351)
T 3mi9_A          204 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ----HQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRL  279 (351)
T ss_dssp             CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHH
T ss_pred             CCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHh
Confidence            46899999999999999999999999754421    011111111100   000000000         000000111  


Q ss_pred             ----HHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          119 ----KAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       119 ----~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                          ....+.+++.+||+.||++|||+.|+
T Consensus       280 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  309 (351)
T 3mi9_A          280 KAYVRDPYALDLIDKLLVLDPAQRIDSDDA  309 (351)
T ss_dssp             HHHHCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             hhccCChHHHHHHHHHhcCChhhCCCHHHH
Confidence                12457899999999999999999999

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.88  E-value=6.5e-24  Score=184.01  Aligned_cols=134  Identities=18%  Similarity=0.206  Sum_probs=96.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC----------------------------------CCCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF----------------------------------WTPGYAAP   47 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~----------------------------------~t~~y~aP   47 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.+.                                  +|+.|+||
T Consensus       114 ~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  190 (316)
T 2ac3_A          114 SVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP  190 (316)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCH
T ss_pred             HHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccCh
Confidence            4688999999999999   9999999999999997542                                  15679999


Q ss_pred             ccccC-----CCCccccceechhHHHHHHhhCCCccccccccCCCCc-------hhHHHHHHhhcCccchhhhhcccccc
Q 022858           48 ETWMS-----FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPS-------GFKWVWKKLEKGEFQDLIIVCGMEKN  115 (291)
Q Consensus        48 E~~~~-----~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (291)
                      |.+.+     ..++.++|||||||++|||++|+.||...........       ........+..+... ...     ..
T Consensus       191 E~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~-----~~  264 (316)
T 2ac3_A          191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYE-FPD-----KD  264 (316)
T ss_dssp             HHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCC-CCH-----HH
T ss_pred             HHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcc-cCc-----hh
Confidence            99875     4578899999999999999999999976543211100       011111222221110 000     00


Q ss_pred             hHHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          116 NKEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       116 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .......+.+++.+||+.||++|||+.|+
T Consensus       265 ~~~~~~~~~~li~~~L~~dP~~Rps~~e~  293 (316)
T 2ac3_A          265 WAHISCAAKDLISKLLVRDAKQRLSAAQV  293 (316)
T ss_dssp             HTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             cccCCHHHHHHHHHHhhCChhhCCCHHHH
Confidence            01234678899999999999999999999

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.88  E-value=1.6e-23  Score=185.49  Aligned_cols=145  Identities=17%  Similarity=0.207  Sum_probs=99.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccC-C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMS-F   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~-~   53 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.++.                           |+.|+|||++.+ .
T Consensus       131 ~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  207 (364)
T 3qyz_A          131 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK  207 (364)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBC
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCC
Confidence            4689999999999999   99999999999999987643                           677999998765 4


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccc-----------hhhhh-cccc-----cch
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQ-----------DLIIV-CGME-----KNN  116 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-~~~~-----~~~  116 (291)
                      .++.++|||||||++|||++|+.||.......    ....+..........           ..... ....     ...
T Consensus       208 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (364)
T 3qyz_A          208 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD----QLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF  283 (364)
T ss_dssp             SCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG----HHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHC
T ss_pred             CCCcchhHHHHHHHHHHHHHCCCCCCCCChHH----HHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhC
Confidence            58999999999999999999999997654321    111111111000000           00000 0000     001


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          117 KEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       117 ~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      ......+.+++.+||+.||++|||+.|+.....+.+.
T Consensus       284 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          284 PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             CCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence            1224568899999999999999999999433445443

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.88  E-value=5.7e-24  Score=185.78  Aligned_cols=136  Identities=15%  Similarity=0.128  Sum_probs=93.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC------------C-----------------CCccccCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------W-----------------TPGYAAPETWMS   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~------------~-----------------t~~y~aPE~~~~   52 (291)
                      ..|+.||+.||+|||+   .+|+||||||+|||++.+.            +                 |+.|+|||++.+
T Consensus       135 ~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~  211 (329)
T 3gbz_A          135 KSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLG  211 (329)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcC
Confidence            4689999999999999   9999999999999995321            1                 778999999987


Q ss_pred             C-CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---Cccchhhh--------hcccccc-----
Q 022858           53 F-PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---GEFQDLII--------VCGMEKN-----  115 (291)
Q Consensus        53 ~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--------~~~~~~~-----  115 (291)
                      . .++.++|||||||++|||++|..||.......    ....+......   ........        +......     
T Consensus       212 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (329)
T 3gbz_A          212 SRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID----QLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVL  287 (329)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH----HHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhc
Confidence            4 58999999999999999999999996543210    01111111000   00000000        0000000     


Q ss_pred             hHHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          116 NKEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       116 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .......+.+++.+||+.||++|||+.|+
T Consensus       288 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~  316 (329)
T 3gbz_A          288 GALLDDEGLDLLTAMLEMDPVKRISAKNA  316 (329)
T ss_dssp             GGGSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             ccccCHHHHHHHHHHccCChhhCCCHHHH
Confidence            01123677899999999999999999999

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.88  E-value=2.8e-23  Score=187.98  Aligned_cols=125  Identities=22%  Similarity=0.255  Sum_probs=91.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccC------------C--------------------CCCccccCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK------------F--------------------WTPGYAAPET   49 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~------------~--------------------~t~~y~aPE~   49 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.+            +                    +|+.|+|||+
T Consensus       121 ~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~  197 (432)
T 3p23_A          121 ITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM  197 (432)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGG
T ss_pred             HHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhh
Confidence            4689999999999999   999999999999999421            1                    1788999999


Q ss_pred             ccC---CCCccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHH
Q 022858           50 WMS---FPVTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMAL  125 (291)
Q Consensus        50 ~~~---~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (291)
                      +.+   ..++.++|||||||++|||++ |..||......        ........... ..      ..........+.+
T Consensus       198 l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--------~~~~~~~~~~~-~~------~~~~~~~~~~~~~  262 (432)
T 3p23_A          198 LSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--------QANILLGACSL-DC------LHPEKHEDVIARE  262 (432)
T ss_dssp             TSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH--------HHHHHTTCCCC-TT------SCTTCHHHHHHHH
T ss_pred             hhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH--------HHHHHhccCCc-cc------cCccccccHHHHH
Confidence            973   567889999999999999999 88888533211        11111111111 10      0111233456788


Q ss_pred             HHHHccccCCCCCCCCCcc
Q 022858          126 VALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v  144 (291)
                      ++.+||+.||.+||++.++
T Consensus       263 li~~~L~~dP~~Rps~~ev  281 (432)
T 3p23_A          263 LIEKMIAMDPQKRPSAKHV  281 (432)
T ss_dssp             HHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHHHhCCHhhCCCHHHH
Confidence            9999999999999999999

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=5.7e-24  Score=187.78  Aligned_cols=126  Identities=21%  Similarity=0.170  Sum_probs=93.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccC--CC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMS--FP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~--~~   54 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                         |+.|+|||++.+  ..
T Consensus       162 ~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  238 (355)
T 1vzo_A          162 QIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSG  238 (355)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC--
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCC
Confidence            4678899999999999   99999999999999987643                         788999999986  35


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++|||||||++|||++|+.||.......    ....+.......          ....+......+.+++.+||+.|
T Consensus       239 ~~~~~DvwslG~il~ell~g~~pf~~~~~~~----~~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~L~~d  304 (355)
T 1vzo_A          239 HDKAVDWWSLGVLMYELLTGASPFTVDGEKN----SQAEISRRILKS----------EPPYPQEMSALAKDLIQRLLMKD  304 (355)
T ss_dssp             -CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC----CHHHHHHHHHHC----------CCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCccCCccc----hHHHHHHHHhcc----------CCCCCcccCHHHHHHHHHHhhhC
Confidence            7889999999999999999999997543221    111111111111          01122233467788999999999


Q ss_pred             CCCCC-----CCCcc
Q 022858          135 PEAMP-----SMTVR  144 (291)
Q Consensus       135 p~~RP-----s~~~v  144 (291)
                      |.+||     ++.++
T Consensus       305 P~~R~~~~~~s~~el  319 (355)
T 1vzo_A          305 PKKRLGCGPRDADEI  319 (355)
T ss_dssp             GGGSTTSSTTTHHHH
T ss_pred             HHHhcCCCCCCHHHH
Confidence            99999     66666

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.88  E-value=5.4e-24  Score=182.56  Aligned_cols=125  Identities=19%  Similarity=0.131  Sum_probs=94.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc-CCC------------------------CCccccCccccCC--C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV-KFW------------------------TPGYAAPETWMSF--P   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~-~~~------------------------t~~y~aPE~~~~~--~   54 (291)
                      ..++.|++.||+|||+   .+|+||||||+||+++. ++.                        ++.|+|||.+.+.  .
T Consensus       125 ~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  201 (295)
T 2clq_A          125 GFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRG  201 (295)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGG
T ss_pred             HHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCC
Confidence            3578999999999999   99999999999999986 322                        6689999998764  3


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||||+++|||++|+.||......      ...........         .....+......+.+++.+||+.|
T Consensus       202 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~d  266 (295)
T 2clq_A          202 YGKAADIWSLGCTIIEMATGKPPFYELGEP------QAAMFKVGMFK---------VHPEIPESMSAEAKAFILKCFEPD  266 (295)
T ss_dssp             CSHHHHHHHHHHHHHHHHHTSCTTGGGSSH------HHHHHHHHHHC---------CCCCCCTTSCHHHHHHHHHTTCSS
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCccCCCch------hHHHHhhcccc---------ccccccccCCHHHHHHHHHHccCC
Confidence            788999999999999999999998654321      00011110000         011112233467889999999999


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |++||++.++
T Consensus       267 p~~Rps~~~l  276 (295)
T 2clq_A          267 PDKRACANDL  276 (295)
T ss_dssp             TTTSCCHHHH
T ss_pred             hhhCCCHHHH
Confidence            9999999998

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.88  E-value=1.9e-23  Score=184.94  Aligned_cols=127  Identities=17%  Similarity=0.131  Sum_probs=96.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc-----------CCC--------------------------CCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV-----------KFW--------------------------TPGY   44 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~-----------~~~--------------------------t~~y   44 (291)
                      +.|+.||+.||+|||+   .+||||||||+|||++.           ++.                          |+.|
T Consensus       175 ~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y  251 (365)
T 3e7e_A          175 ISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGF  251 (365)
T ss_dssp             HHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSC
T ss_pred             HHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCC
Confidence            5789999999999999   99999999999999987           322                          8899


Q ss_pred             ccCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHH
Q 022858           45 AAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMA  124 (291)
Q Consensus        45 ~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (291)
                      +|||++.+..++.++|||||||++|||++|+.||........               .......    ....   ...+.
T Consensus       252 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~---------------~~~~~~~----~~~~---~~~~~  309 (365)
T 3e7e_A          252 QCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC---------------KPEGLFR----RLPH---LDMWN  309 (365)
T ss_dssp             CCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE---------------EECSCCT----TCSS---HHHHH
T ss_pred             CChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce---------------eechhcc----ccCc---HHHHH
Confidence            999999999999999999999999999999999865543200               0000000    0011   24556


Q ss_pred             HHHHHccccCCCCCC-CCCccchhhhhhcccc
Q 022858          125 LVALWRVQYKPEAMP-SMTVRPAKFMLHGSLA  155 (291)
Q Consensus       125 ~l~~~cl~~~p~~RP-s~~~v~~~~~L~~~~~  155 (291)
                      +++..|++.+|.+|+ ++.++  .+.|+....
T Consensus       310 ~~~~~~l~~~p~~r~~~~~~l--~~~l~~~l~  339 (365)
T 3e7e_A          310 EFFHVMLNIPDCHHLPSLDLL--RQKLKKVFQ  339 (365)
T ss_dssp             HHHHHHHCCCCTTCCCCHHHH--HHHHHHHHH
T ss_pred             HHHHHHcCCCCCCcchHHHHH--HHHHHHHHH
Confidence            778899999999995 55666  666665543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.88  E-value=9.8e-24  Score=188.09  Aligned_cols=145  Identities=14%  Similarity=0.129  Sum_probs=99.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc-CCC-----------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV-KFW-----------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~-~~~-----------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++. ++.                       |+.|+|||.+.+. .++
T Consensus       144 ~~i~~qi~~aL~~LH~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  220 (383)
T 3eb0_A          144 SIYIYQLFRAVGFIHS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYT  220 (383)
T ss_dssp             HHHHHHHHHHHHHHHT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCC
T ss_pred             HHHHHHHHHHHHHHHH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCC
Confidence            4688999999999999   99999999999999973 321                       7789999998875 589


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC----------ccchhhhhcc-----cccchHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG----------EFQDLIIVCG-----MEKNNKEKAE  121 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~-----~~~~~~~~~~  121 (291)
                      .++||||+||++|||++|+.||.......    ....+.......          ...+..-+..     ....+...+.
T Consensus       221 ~~~DiwslG~il~ell~g~~pf~~~~~~~----~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (383)
T 3eb0_A          221 PSIDLWSIGCVFGELILGKPLFSGETSID----QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPS  296 (383)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCH
T ss_pred             cchhhhhHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCH
Confidence            99999999999999999999997654221    111111110000          0000000000     0001112345


Q ss_pred             HHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          122 RMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       122 ~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      .+.+++.+||+.||.+|||+.|+.....++..
T Consensus       297 ~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          297 LAIDLLEQILRYEPDLRINPYEAMAHPFFDHL  328 (383)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHH
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhcCHHHHHH
Confidence            68899999999999999999999434445544

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.88  E-value=3.6e-24  Score=186.33  Aligned_cols=116  Identities=20%  Similarity=0.295  Sum_probs=92.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc-CCC----------------------CCccccCccccCCCC-cc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV-KFW----------------------TPGYAAPETWMSFPV-TH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~-~~~----------------------t~~y~aPE~~~~~~~-~~   57 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++. ++.                      ++.|+|||++.+..+ +.
T Consensus       152 ~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  228 (320)
T 3a99_A          152 RSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR  228 (320)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHH
T ss_pred             HHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCc
Confidence            4688999999999999   99999999999999983 321                      778999999887665 68


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|+.||......             . .+..          .........+.+++.+||+.||++
T Consensus       229 ~~Di~slG~il~el~~g~~pf~~~~~~-------------~-~~~~----------~~~~~~~~~~~~li~~~l~~dp~~  284 (320)
T 3a99_A          229 SAAVWSLGILLYDMVCGDIPFEHDEEI-------------I-RGQV----------FFRQRVSSECQHLIRWCLALRPSD  284 (320)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCSHHHH-------------H-HCCC----------CCSSCCCHHHHHHHHHHTCSSGGG
T ss_pred             cchHHhHHHHHHHHHHCCCCCCChhhh-------------h-cccc----------cccccCCHHHHHHHHHHccCChhh
Confidence            899999999999999999998643210             0 0000          001122357789999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       285 Rps~~~l  291 (320)
T 3a99_A          285 RPTFEEI  291 (320)
T ss_dssp             SCCHHHH
T ss_pred             CcCHHHH
Confidence            9999999

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.88  E-value=3e-23  Score=178.98  Aligned_cols=126  Identities=20%  Similarity=0.310  Sum_probs=97.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEE---ccCCC----------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILL---DVKFW----------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll---~~~~~----------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.|++.||+|||+   .+|+||||||+||++   +.++.                      ++.|+|||.+.+..++
T Consensus       109 ~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  185 (304)
T 2jam_A          109 SLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYS  185 (304)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCSCC
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccccCCCCccChHHhccCCCC
Confidence            4688999999999999   999999999999999   33322                      7789999999998999


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++||||||+++|||++|..||......        .....+..+... .     ..+........+.+++.+|++.||+
T Consensus       186 ~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~~~-~-----~~~~~~~~~~~~~~li~~~l~~dp~  251 (304)
T 2jam_A          186 KAVDCWSIGVITYILLCGYPPFYEETES--------KLFEKIKEGYYE-F-----ESPFWDDISESAKDFICHLLEKDPN  251 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHCCCC-C-----CTTTTTTSCHHHHHHHHHHHCSSTT
T ss_pred             chhhHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCC-C-----CccccccCCHHHHHHHHHHcCCChh
Confidence            9999999999999999999998654321        122222222110 0     0111122346788999999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +||++.++
T Consensus       252 ~Rps~~~~  259 (304)
T 2jam_A          252 ERYTCEKA  259 (304)
T ss_dssp             TSCCHHHH
T ss_pred             HCcCHHHH
Confidence            99999999

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.88  E-value=1.6e-23  Score=199.17  Aligned_cols=119  Identities=22%  Similarity=0.287  Sum_probs=96.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.|+.||+.||+|||+   .+||||||||+||||+.++.                        |+.|+|||++.+..++.
T Consensus       445 ~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~  521 (674)
T 3pfq_A          445 VFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGK  521 (674)
T ss_dssp             HHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBST
T ss_pred             HHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCc
Confidence            4688999999999999   99999999999999986643                        88999999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||......        .+...+.....          ..+......+.+|+.+||+.||++
T Consensus       522 ~~DvwSlGvilyelltG~~Pf~~~~~~--------~~~~~i~~~~~----------~~p~~~s~~~~~li~~lL~~dP~~  583 (674)
T 3pfq_A          522 SVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIMEHNV----------AYPKSMSKEAVAICKGLMTKHPGK  583 (674)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHSSCC----------CCCTTSCHHHHHHHHHHSCSSSTT
T ss_pred             cceEechHHHHHHHHcCCCCCCCCCHH--------HHHHHHHhCCC----------CCCccCCHHHHHHHHHHccCCHHH
Confidence            999999999999999999999765321        12222222211          111233467889999999999999


Q ss_pred             CCCC
Q 022858          138 MPSM  141 (291)
Q Consensus       138 RPs~  141 (291)
                      ||++
T Consensus       584 R~~~  587 (674)
T 3pfq_A          584 RLGC  587 (674)
T ss_dssp             CTTC
T ss_pred             CCCC
Confidence            9998

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.87  E-value=3.7e-23  Score=183.39  Aligned_cols=145  Identities=17%  Similarity=0.186  Sum_probs=100.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccC-CCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMS-FPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~-~~~~~~~   59 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                     |+.|+|||.+.+ ..++.++
T Consensus       135 ~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~  211 (367)
T 2fst_X          135 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTV  211 (367)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC---------------CCCTTCCHHHHTTCCSCCTTH
T ss_pred             HHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeeccccccccccCCCcCcCcCccChHHHcCCcCCCchh
Confidence            4688999999999999   99999999999999987653                     788999999887 6789999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC-----------ccchhhhhc-ccccc-----hHHHHHH
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG-----------EFQDLIIVC-GMEKN-----NKEKAER  122 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~-~~~~~-----~~~~~~~  122 (291)
                      ||||+||++|||++|+.||......    .....+.......           .....+..- .....     .......
T Consensus       212 DiwslG~il~ell~g~~pf~~~~~~----~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (367)
T 2fst_X          212 DIWSVGCIMAELLTGRTLFPGTDHI----DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL  287 (367)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHH
Confidence            9999999999999999999754421    0111111110000           000000000 00000     0112356


Q ss_pred             HHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          123 MALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       123 ~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      +.+|+.+||+.||++|||+.|+.....+...
T Consensus       288 ~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~  318 (367)
T 2fst_X          288 AVDLLEKMLVLDSDKRITAAQALAHAYFAQY  318 (367)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHHhCCCCcccCcCHHHHhcChhhhhc
Confidence            7899999999999999999999333345443

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.87  E-value=1.6e-23  Score=182.93  Aligned_cols=120  Identities=21%  Similarity=0.206  Sum_probs=93.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||++.+..++.
T Consensus       124 ~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  200 (327)
T 3a62_A          124 CFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNR  200 (327)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCT
T ss_pred             HHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCC
Confidence            4578999999999999   99999999999999986543                        77899999999888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|+.||......       . ....+.....          ..+......+.+++.+||+.||.+
T Consensus       201 ~~DiwslG~il~el~~g~~pf~~~~~~-------~-~~~~i~~~~~----------~~p~~~~~~~~~li~~~L~~dp~~  262 (327)
T 3a62_A          201 AVDWWSLGALMYDMLTGAPPFTGENRK-------K-TIDKILKCKL----------NLPPYLTQEARDLLKKLLKRNAAS  262 (327)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSHH-------H-HHHHHHHTCC----------CCCTTSCHHHHHHHHHHSCSCGGG
T ss_pred             cccchhHHHHHHHHHHCCCCCCCCCHH-------H-HHHHHHhCCC----------CCCCCCCHHHHHHHHHHHhcCHhh
Confidence            999999999999999999999754321       1 1111111111          111223467889999999999999


Q ss_pred             CCCCC
Q 022858          138 MPSMT  142 (291)
Q Consensus       138 RPs~~  142 (291)
                      ||++.
T Consensus       263 R~~~~  267 (327)
T 3a62_A          263 RLGAG  267 (327)
T ss_dssp             STTSS
T ss_pred             ccCCC
Confidence            99654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.87  E-value=2.1e-23  Score=193.05  Aligned_cols=125  Identities=22%  Similarity=0.257  Sum_probs=96.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.||+.||+|||+   .+|+||||||+|||++.++.                        |+.|+|||++.+..++.
T Consensus       292 ~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~  368 (543)
T 3c4z_A          292 IFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF  368 (543)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCCh
Confidence            4578999999999999   99999999999999986643                        78899999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++|||||||++|||++|+.||.......    ....+...+.....          ..+......+.+++.+||+.||++
T Consensus       369 ~~DiwSlGvilyelltG~~PF~~~~~~~----~~~~~~~~i~~~~~----------~~p~~~s~~~~~li~~lL~~dP~~  434 (543)
T 3c4z_A          369 SVDYFALGVTLYEMIAARGPFRARGEKV----ENKELKQRVLEQAV----------TYPDKFSPASKDFCEALLQKDPEK  434 (543)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCTTCCC----CHHHHHHHHHHCCC----------CCCTTSCHHHHHHHHHHSCSSGGG
T ss_pred             HHhcCcchHHHHHHHhCCCCCCCCccch----hHHHHHHHHhhccc----------CCCcccCHHHHHHHHHhccCCHhH
Confidence            9999999999999999999997653211    11112222211111          112233467788999999999999


Q ss_pred             CCCCCc
Q 022858          138 MPSMTV  143 (291)
Q Consensus       138 RPs~~~  143 (291)
                      ||++.+
T Consensus       435 R~~~~~  440 (543)
T 3c4z_A          435 RLGFRD  440 (543)
T ss_dssp             SCCCBT
T ss_pred             CCCCcc
Confidence            998753

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.87  E-value=2.5e-23  Score=184.29  Aligned_cols=126  Identities=25%  Similarity=0.346  Sum_probs=95.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccC------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMS------   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~------   52 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                       |+.|+|||++.+      
T Consensus       203 ~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  279 (365)
T 2y7j_A          203 RSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETH  279 (365)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTS
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccC
Confidence            4689999999999999   99999999999999987643                       778999998863      


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++|||||||++|||++|..||......        .....+..+..... .+     ........+.+++.+||+
T Consensus       280 ~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--------~~~~~i~~~~~~~~-~~-----~~~~~~~~~~~li~~~L~  345 (365)
T 2y7j_A          280 PGYGKEVDLWACGVILFTLLAGSPPFWHRRQI--------LMLRMIMEGQYQFS-SP-----EWDDRSSTVKDLISRLLQ  345 (365)
T ss_dssp             CCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCCC-HH-----HHSSSCHHHHHHHHHHSC
T ss_pred             cCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhCCCCCC-Cc-----ccccCCHHHHHHHHHHcC
Confidence            35888999999999999999999999654321        11122222111100 00     001223568899999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .||++||++.++
T Consensus       346 ~dP~~Rps~~el  357 (365)
T 2y7j_A          346 VDPEARLTAEQA  357 (365)
T ss_dssp             SSTTTSCCHHHH
T ss_pred             CChhHCcCHHHH
Confidence            999999999998

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.87  E-value=5.2e-24  Score=182.23  Aligned_cols=124  Identities=24%  Similarity=0.262  Sum_probs=92.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC---C-----------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF---W-----------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~---~-----------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.+.   .                       ++.|+|||.+. ..+
T Consensus       127 ~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~  202 (285)
T 3is5_A          127 AELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDV  202 (285)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCHHHHT-TCC
T ss_pred             HHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc-cCC
Confidence            5789999999999999   9999999999999995321   1                       77899999876 468


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||||+++|||++|+.||......        ...............       ........+.+++.+||+.||
T Consensus       203 ~~~~Di~slG~il~~ll~g~~pf~~~~~~--------~~~~~~~~~~~~~~~-------~~~~~~~~~~~li~~~L~~dP  267 (285)
T 3is5_A          203 TFKCDIWSAGVVMYFLLTGCLPFTGTSLE--------EVQQKATYKEPNYAV-------ECRPLTPQAVDLLKQMLTKDP  267 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCC---------CCCCHHHHHHHHHHTCSCT
T ss_pred             CcccCeehHHHHHHHHHhCCCCCCCCCHH--------HHHhhhccCCccccc-------ccCcCCHHHHHHHHHHccCCh
Confidence            89999999999999999999999654321        111111111100000       000123567889999999999


Q ss_pred             CCCCCCCcc
Q 022858          136 EAMPSMTVR  144 (291)
Q Consensus       136 ~~RPs~~~v  144 (291)
                      ++||++.|+
T Consensus       268 ~~Rps~~e~  276 (285)
T 3is5_A          268 ERRPSAAQV  276 (285)
T ss_dssp             TTSCCHHHH
T ss_pred             hhCcCHHHH
Confidence            999999998

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.87  E-value=1.2e-23  Score=182.11  Aligned_cols=125  Identities=20%  Similarity=0.206  Sum_probs=96.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      +.++.|++.||.|||+   .+|+|+||||+||+++.++.                        ++.|+|||.+.+..++.
T Consensus       128 ~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  204 (314)
T 3com_A          128 ATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNC  204 (314)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCT
T ss_pred             HHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCc
Confidence            5689999999999999   99999999999999986643                        66799999999888999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|..||......       .... ..........       ..+......+.+++.+||+.||.+
T Consensus       205 ~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~-~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~  269 (314)
T 3com_A          205 VADIWSLGITAIEMAEGKPPYADIHPM-------RAIF-MIPTNPPPTF-------RKPELWSDNFTDFVKQCLVKSPEQ  269 (314)
T ss_dssp             THHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHH-HHHHSCCCCC-------SSGGGSCHHHHHHHHHHTCSCTTT
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCCChH-------HHHH-HHhcCCCccc-------CCcccCCHHHHHHHHHHccCChhh
Confidence            999999999999999999998654321       1111 1111110000       111223467889999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.++
T Consensus       270 Rpt~~~l  276 (314)
T 3com_A          270 RATATQL  276 (314)
T ss_dssp             SCCHHHH
T ss_pred             CcCHHHH
Confidence            9999999

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.87  E-value=2.2e-23  Score=177.82  Aligned_cols=135  Identities=19%  Similarity=0.219  Sum_probs=100.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC----C-----------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF----W-----------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~----~-----------------------t~~y~aPE~~~~~~   54 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.++    .                       ++.|+|||.+.+..
T Consensus       111 ~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  187 (283)
T 3bhy_A          111 TQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEP  187 (283)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcccccCCCcCccCcceecCCC
Confidence            5789999999999999   9999999999999997654    1                       67899999999889


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||||+++|||++|..||......        .....+.......      ...........+.+++.+|++.|
T Consensus       188 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~d  253 (283)
T 3bhy_A          188 LGLEADMWSIGVITYILLSGASPFLGETKQ--------ETLTNISAVNYDF------DEEYFSNTSELAKDFIRRLLVKD  253 (283)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHTTCCCC------CHHHHTTCCHHHHHHHHTTSCSS
T ss_pred             CCcchhhhhHHHHHHHHHHCCCCCCCcchH--------HHHHHhHhcccCC------cchhcccCCHHHHHHHHHHccCC
Confidence            999999999999999999999998654321        1111121111100      00011122467889999999999


Q ss_pred             CCCCCCCCccchhhhhhcc
Q 022858          135 PEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~  153 (291)
                      |++||++.++.....++..
T Consensus       254 p~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          254 PKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             GGGSCCHHHHHHCHHHHHH
T ss_pred             HhHCcCHHHHHhCHHHHHH
Confidence            9999999999332345444

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.87  E-value=1.9e-23  Score=190.99  Aligned_cols=131  Identities=21%  Similarity=0.268  Sum_probs=100.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCC-cc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPV-TH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~-~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                       |+.|+|||.+.+..+ +.
T Consensus       119 ~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  195 (476)
T 2y94_A          119 RRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP  195 (476)
T ss_dssp             HHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSH
T ss_pred             HHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCC
Confidence            4689999999999999   99999999999999987643                       788999999988765 68


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||+||++|||++|..||......        .....+..+...          .+......+.+++.+||+.||.+
T Consensus       196 ~~DiwSlGvil~elltG~~Pf~~~~~~--------~~~~~i~~~~~~----------~p~~~s~~~~~Li~~~L~~dP~~  257 (476)
T 2y94_A          196 EVDIWSSGVILYALLCGTLPFDDDHVP--------TLFKKICDGIFY----------TPQYLNPSVISLLKHMLQVDPMK  257 (476)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSSH--------HHHHHHHTTCCC----------CCTTCCHHHHHHHHHHTCSSTTT
T ss_pred             cceehhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHhcCCcC----------CCccCCHHHHHHHHHHcCCCchh
Confidence            999999999999999999999754321        122222222111          11122356788999999999999


Q ss_pred             CCCCCccchhhhhhcc
Q 022858          138 MPSMTVRPAKFMLHGS  153 (291)
Q Consensus       138 RPs~~~v~~~~~L~~~  153 (291)
                      |||+.++....++...
T Consensus       258 Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          258 RATIKDIREHEWFKQD  273 (476)
T ss_dssp             SCCHHHHHTCHHHHTT
T ss_pred             CcCHHHHHhCHHhhhc
Confidence            9999999434456543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.87  E-value=3.4e-23  Score=180.18  Aligned_cols=127  Identities=23%  Similarity=0.270  Sum_probs=95.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCcccc---C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWM---S   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~---~   52 (291)
                      +.++.||+.||+|||+   .+|+||||||+|||++.+..                          ++.|+|||++.   .
T Consensus       117 ~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  193 (322)
T 2ycf_A          117 KLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT  193 (322)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccccccccCCcCccCchhhccCCC
Confidence            4688999999999999   99999999999999975431                          78899999874   4


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++||||||+++|||++|..||......   ..+..    .+..+.....  +    .........+.+++.+||+
T Consensus       194 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~----~~~~~~~~~~--~----~~~~~~~~~~~~li~~~l~  260 (322)
T 2ycf_A          194 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ---VSLKD----QITSGKYNFI--P----EVWAEVSEKALDLVKKLLV  260 (322)
T ss_dssp             TTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS---SCHHH----HHHHTCCCCC--H----HHHTTSCHHHHHHHHHHSC
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCcccchH---HHHHH----HHHhCccccC--c----hhhhhcCHHHHHHHHHHcc
Confidence            57889999999999999999999999754432   11111    1111111100  0    0011234678899999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .||++||++.++
T Consensus       261 ~dP~~Rps~~~~  272 (322)
T 2ycf_A          261 VDPKARFTTEEA  272 (322)
T ss_dssp             SSTTTSCCHHHH
T ss_pred             cCHhhCCCHHHH
Confidence            999999999998

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.87  E-value=6.1e-24  Score=184.97  Aligned_cols=124  Identities=19%  Similarity=0.228  Sum_probs=93.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCcccc-----C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWM-----S   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~-----~   52 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                        ++.|+|||.+.     +
T Consensus       132 ~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  208 (326)
T 2x7f_A          132 AYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPD  208 (326)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCTTTC-------------CCGGGCCHHHHC------
T ss_pred             HHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccC
Confidence            4688999999999999   99999999999999986643                        67899999987     4


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++||||||+++|||++|..||......       .... ..........        ........+.+++.+||+
T Consensus       209 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~-~~~~~~~~~~--------~~~~~~~~l~~li~~~l~  272 (326)
T 2x7f_A          209 ATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-------RALF-LIPRNPAPRL--------KSKKWSKKFQSFIESCLV  272 (326)
T ss_dssp             --CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHH-HHHHSCCCCC--------SCSCSCHHHHHHHHHHCC
T ss_pred             cCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-------HHHH-HhhcCccccC--------CccccCHHHHHHHHHHhc
Confidence            57889999999999999999999998644321       1111 1111111110        111224678899999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .||.+||++.++
T Consensus       273 ~dp~~Rps~~~l  284 (326)
T 2x7f_A          273 KNHSQRPATEQL  284 (326)
T ss_dssp             SSGGGSCCHHHH
T ss_pred             cChhhCCCHHHH
Confidence            999999999999

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.87  E-value=2.2e-23  Score=179.39  Aligned_cols=125  Identities=23%  Similarity=0.294  Sum_probs=96.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCcccc-----C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWM-----S   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~-----~   52 (291)
                      +.++.|++.||+|||+   .+++||||||+||+++.++.                        ++.|+|||.+.     +
T Consensus       120 ~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  196 (302)
T 2j7t_A          120 QVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD  196 (302)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCC
Confidence            5689999999999999   99999999999999986643                        77899999983     5


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++||||||+++|||++|..|+......       ..... .........       ..+......+.+++.+||+
T Consensus       197 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~-~~~~~~~~~-------~~~~~~~~~l~~li~~~l~  261 (302)
T 2j7t_A          197 TPYDYKADIWSLGITLIEMAQIEPPHHELNPM-------RVLLK-IAKSDPPTL-------LTPSKWSVEFRDFLKIALD  261 (302)
T ss_dssp             TTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHH-HHHSCCCCC-------SSGGGSCHHHHHHHHHHSC
T ss_pred             CCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-------HHHHH-HhccCCccc-------CCccccCHHHHHHHHHHcc
Confidence            67889999999999999999999998654321       11111 111111111       1122234678899999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .||++||++.++
T Consensus       262 ~dp~~Rps~~~l  273 (302)
T 2j7t_A          262 KNPETRPSAAQL  273 (302)
T ss_dssp             SCTTTSCCHHHH
T ss_pred             cChhhCCCHHHH
Confidence            999999999998

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.87  E-value=3.3e-23  Score=182.55  Aligned_cols=145  Identities=14%  Similarity=0.160  Sum_probs=101.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccC-CCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMS-FPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~-~~~~~~~   59 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                     ++.|+|||.+.+ ..++.++
T Consensus       129 ~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~  205 (353)
T 3coi_A          129 QYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTV  205 (353)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCCTTH
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCCchh
Confidence            4689999999999999   99999999999999987653                     778999999887 6789999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc-----------Cccchhhhh------cccccchHHHHHH
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK-----------GEFQDLIIV------CGMEKNNKEKAER  122 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~------~~~~~~~~~~~~~  122 (291)
                      ||||||+++|||++|+.||......    .....+......           ......+..      .............
T Consensus       206 Di~slG~il~el~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (353)
T 3coi_A          206 DIWSVGCIMAEMLTGKTLFKGKDYL----DQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQ  281 (353)
T ss_dssp             HHHHHHHHHHHHHHSSCSSBSSCHH----HHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHH
Confidence            9999999999999999999755421    011111110000           000000000      0001111234567


Q ss_pred             HHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          123 MALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       123 ~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      +.+++.+|++.||++||++.++.....+...
T Consensus       282 ~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          282 AADLLEKMLELDVDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             HHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence            8899999999999999999999433445443

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.87  E-value=3.5e-23  Score=190.16  Aligned_cols=133  Identities=24%  Similarity=0.288  Sum_probs=99.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC--------------------------CCCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--------------------------WTPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~--------------------------~t~~y~aPE~~~~~~~   55 (291)
                      ..|+.||+.||+|||+   .+|+||||||+|||++.+.                          +|+.|+|||++.+ .+
T Consensus       124 ~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~  199 (486)
T 3mwu_A          124 ARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TY  199 (486)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS-CC
T ss_pred             HHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC-CC
Confidence            4689999999999999   9999999999999995321                          1788999999876 58


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||+||++|+|++|..||......        .....+..+.....      .+........+.+++.+||+.||
T Consensus       200 ~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~~------~~~~~~~s~~~~~li~~~L~~dp  265 (486)
T 3mwu_A          200 DEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRVETGKYAFD------LPQWRTISDDAKDLIRKMLTFHP  265 (486)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCSC------SGGGGGSCHHHHHHHHHHTCSST
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCC------CcccCCCCHHHHHHHHHHcCCCh
Confidence            99999999999999999999999654321        12222222221110      11112234678899999999999


Q ss_pred             CCCCCCCccchhhhhhc
Q 022858          136 EAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~  152 (291)
                      .+|||+.++....++..
T Consensus       266 ~~R~t~~~~l~hp~~~~  282 (486)
T 3mwu_A          266 SLRITATQCLEHPWIQK  282 (486)
T ss_dssp             TTSCCHHHHHHCHHHHH
T ss_pred             hhCcCHHHHhcCHhhcc
Confidence            99999999933334544

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.87  E-value=2.1e-23  Score=184.37  Aligned_cols=145  Identities=16%  Similarity=0.149  Sum_probs=101.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccC-CCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMS-FPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~-~~~~~   57 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.++.                       ++.|+|||.+.+ ..++.
T Consensus       137 ~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  213 (362)
T 3pg1_A          137 QYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTK  213 (362)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCT
T ss_pred             HHHHHHHHHHHHHHHH---CcCEecCCChHHEEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCc
Confidence            4689999999999999   99999999999999986643                       677999999887 67899


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccch-----------hhhh-------cccccchHHH
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQD-----------LIIV-------CGMEKNNKEK  119 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-------~~~~~~~~~~  119 (291)
                      ++|||||||++|||++|+.||......    .....+...........           ....       ..........
T Consensus       214 ~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (362)
T 3pg1_A          214 LVDMWSAGCVMAEMFNRKALFRGSTFY----NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTA  289 (362)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTS
T ss_pred             HhHHHhHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCC
Confidence            999999999999999999999754321    01111111110000000           0000       0000011122


Q ss_pred             HHHHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          120 AERMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       120 ~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      ...+.+++.+||+.||.+|||+.|+.....+++.
T Consensus       290 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  323 (362)
T 3pg1_A          290 DPVALDLIAKMLEFNPQRRISTEQALRHPYFESL  323 (362)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence            4568899999999999999999999444445554

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.87  E-value=1.5e-23  Score=178.28  Aligned_cols=130  Identities=21%  Similarity=0.281  Sum_probs=95.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCC-cc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPV-TH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~-~~   57 (291)
                      +.++.|++.||+|||+   .+|+|+||||+||+++.++.                       ++.|+|||.+.+..+ +.
T Consensus       114 ~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  190 (276)
T 2h6d_A          114 RRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP  190 (276)
T ss_dssp             HHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------------CCTGGGTTSCCCHH
T ss_pred             HHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCc
Confidence            5689999999999999   99999999999999986643                       678999999987655 68


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|..||.....        ......+..+..          ..+......+.+++.+|++.||++
T Consensus       191 ~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~~p~~  252 (276)
T 2h6d_A          191 EVDIWSCGVILYALLCGTLPFDDEHV--------PTLFKKIRGGVF----------YIPEYLNRSVATLLMHMLQVDPLK  252 (276)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCC----------CCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             cchHHHHHHHHHHHHhCCCCCCCCcH--------HHHHHHhhcCcc----------cCchhcCHHHHHHHHHHccCChhh
Confidence            99999999999999999999865432        112222222111          011122356788999999999999


Q ss_pred             CCCCCccchhhhhhc
Q 022858          138 MPSMTVRPAKFMLHG  152 (291)
Q Consensus       138 RPs~~~v~~~~~L~~  152 (291)
                      ||++.++.....+.+
T Consensus       253 Rps~~~~l~h~~~~~  267 (276)
T 2h6d_A          253 RATIKDIREHEWFKQ  267 (276)
T ss_dssp             SCCHHHHHHSHHHHT
T ss_pred             CCCHHHHHhChhhcc
Confidence            999999933333433

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.87  E-value=1.4e-23  Score=185.38  Aligned_cols=143  Identities=16%  Similarity=0.183  Sum_probs=100.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCC-CeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQ-QIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~-~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..|+.|++.||+|||+   . +|+||||||+|||++.++.                      ++.|+|||++.+..++.+
T Consensus       134 ~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  210 (360)
T 3eqc_A          134 GKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ  210 (360)
T ss_dssp             HHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCCCTTCCHHHHTTCCCSHH
T ss_pred             HHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCCCCCeECHHHHcCCCCCch
Confidence            4689999999999998   5 8999999999999987643                      789999999999999999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHH---------------------------HhhcCccchhhh---
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWK---------------------------KLEKGEFQDLII---  108 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~---  108 (291)
                      +||||||+++|||++|+.||.......     ......                           ........+..+   
T Consensus       211 ~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (360)
T 3eqc_A          211 SDIWSMGLSLVEMAVGRYPIPPPDAKE-----LELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIV  285 (360)
T ss_dssp             HHHHHHHHHHHHHHHTSCCSSCCCHHH-----HHHHHC------------------------------CCCHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHh
Confidence            999999999999999999986543210     000000                           000000000000   


Q ss_pred             -hcccccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhc
Q 022858          109 -VCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       109 -~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~  152 (291)
                       ..............+.+++.+||+.||++|||+.|+.....+.+
T Consensus       286 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  330 (360)
T 3eqc_A          286 NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  330 (360)
T ss_dssp             HSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHH
T ss_pred             ccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhc
Confidence             00000111123457889999999999999999999944444444

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.87  E-value=8.5e-24  Score=184.31  Aligned_cols=128  Identities=23%  Similarity=0.262  Sum_probs=82.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCC-CeEeecCCCCcEEEccCCC-----------------------CCccccCccc----cCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQ-QIIHYNIKPENILLDVKFW-----------------------TPGYAAPETW----MSF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~-~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~----~~~   53 (291)
                      ..++.|++.||.|||+   . +|+||||||+|||++.++.                       ++.|+|||.+    .+.
T Consensus       128 ~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  204 (327)
T 3aln_A          128 GKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQ  204 (327)
T ss_dssp             HHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-----------------------------
T ss_pred             HHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccccccCCCCccccCceeeccccCcC
Confidence            4689999999999999   7 9999999999999986542                       6789999998    455


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      .++.++||||||+++|||++|+.||.......      +.. .....+....+     ...........+.+++.+||+.
T Consensus       205 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~-~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~  272 (327)
T 3aln_A          205 GYDVRSDVWSLGITLYELATGRFPYPKWNSVF------DQL-TQVVKGDPPQL-----SNSEEREFSPSFINFVNLCLTK  272 (327)
T ss_dssp             -CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCSCCCCC-----CCCSSCCCCHHHHHHHHHHTCS
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCcchHH------HHH-HHHhcCCCCCC-----CCcccccCCHHHHHHHHHHhhC
Confidence            78999999999999999999999987543210      000 00001111110     0111122346788999999999


Q ss_pred             CCCCCCCCCcc
Q 022858          134 KPEAMPSMTVR  144 (291)
Q Consensus       134 ~p~~RPs~~~v  144 (291)
                      ||++||++.++
T Consensus       273 dp~~Rps~~el  283 (327)
T 3aln_A          273 DESKRPKYKEL  283 (327)
T ss_dssp             SGGGSCCHHHH
T ss_pred             ChhhCcCHHHH
Confidence            99999999999

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.87  E-value=2.5e-23  Score=190.99  Aligned_cols=134  Identities=26%  Similarity=0.295  Sum_probs=100.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc---CCC-----------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV---KFW-----------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~---~~~-----------------------t~~y~aPE~~~~~~~   55 (291)
                      ..|+.||+.||+|||+   .+|+||||||+|||++.   ++.                       |+.|+|||++.+ .+
T Consensus       129 ~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~  204 (484)
T 3nyv_A          129 ARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TY  204 (484)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CC
T ss_pred             HHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC-CC
Confidence            4689999999999999   99999999999999952   221                       788999999876 68


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||+||++|+|++|..||......        .....+..+.....      .+.....+..+.+++.+||+.||
T Consensus       205 ~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~~------~~~~~~~s~~~~~li~~~L~~dp  270 (484)
T 3nyv_A          205 DEKCDVWSTGVILYILLSGCPPFNGANEY--------DILKKVEKGKYTFE------LPQWKKVSESAKDLIRKMLTYVP  270 (484)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCC------SGGGGGSCHHHHHHHHHHTCSSG
T ss_pred             CCcceeHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCCCC------CcccccCCHHHHHHHHHHCCCCh
Confidence            99999999999999999999999755421        12222222221110      11112334678899999999999


Q ss_pred             CCCCCCCccchhhhhhcc
Q 022858          136 EAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~  153 (291)
                      .+|||+.|+....++...
T Consensus       271 ~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          271 SMRISARDALDHEWIQTY  288 (484)
T ss_dssp             GGSCCHHHHHTSHHHHHH
T ss_pred             hHCcCHHHHhhChhhccc
Confidence            999999999444455443

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.87  E-value=5.4e-23  Score=189.25  Aligned_cols=134  Identities=27%  Similarity=0.325  Sum_probs=99.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ..|+.||+.||+|||+   .+|+||||||+|||++.+..                          |+.|+|||++. ..+
T Consensus       139 ~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~  214 (494)
T 3lij_A          139 AVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKY  214 (494)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHT-TCB
T ss_pred             HHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHc-ccC
Confidence            4689999999999999   99999999999999964311                          78899999876 468


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||+||++|+|++|..||......        .+...+..+.....      .+........+.+++.+||+.||
T Consensus       215 ~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~~------~~~~~~~s~~~~~li~~~L~~dp  280 (494)
T 3lij_A          215 DEKCDVWSIGVILFILLAGYPPFGGQTDQ--------EILRKVEKGKYTFD------SPEWKNVSEGAKDLIKQMLQFDS  280 (494)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCCC------SGGGTTSCHHHHHHHHHHTCSST
T ss_pred             CCchhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCC------chhcccCCHHHHHHHHHHCCCCh
Confidence            99999999999999999999999755421        12222222211100      11112234678899999999999


Q ss_pred             CCCCCCCccchhhhhhcc
Q 022858          136 EAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~  153 (291)
                      .+|||+.++....++...
T Consensus       281 ~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          281 QRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             TTSCCHHHHHTCHHHHHH
T ss_pred             hhCccHHHHhcCcccccC
Confidence            999999999434445543

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.87  E-value=2.9e-23  Score=182.64  Aligned_cols=144  Identities=19%  Similarity=0.237  Sum_probs=98.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------------CCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------------TPGYAAP   47 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------------t~~y~aP   47 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                                  |+.|+||
T Consensus       115 ~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  191 (353)
T 2b9h_A          115 QYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAP  191 (353)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCH
T ss_pred             HHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCC
Confidence            5689999999999999   99999999999999986542                                  4569999


Q ss_pred             ccccC-CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCc------------cchhhhh-----
Q 022858           48 ETWMS-FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGE------------FQDLIIV-----  109 (291)
Q Consensus        48 E~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~-----  109 (291)
                      |++.+ ..++.++|||||||++|||++|+.||.......    ....+........            ..+.+..     
T Consensus       192 E~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (353)
T 2b9h_A          192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH----QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYP  267 (353)
T ss_dssp             HHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCC
T ss_pred             eeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH----HHHHHHHHhCCCchhccccccccchhhHHhhcccCCC
Confidence            98765 678999999999999999999999997553210    0000000000000            0000000     


Q ss_pred             -cccccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhc
Q 022858          110 -CGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       110 -~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~  152 (291)
                       .............+.+++.+||+.||++|||+.++.....+..
T Consensus       268 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  311 (353)
T 2b9h_A          268 AAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT  311 (353)
T ss_dssp             CCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             CcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence             0000001123467789999999999999999999933334443

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.87  E-value=2.8e-23  Score=180.03  Aligned_cols=127  Identities=20%  Similarity=0.206  Sum_probs=93.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCC-CeEeecCCCCcEEEccCCC-----------------------CCccccCcccc-----C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQ-QIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWM-----S   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~-~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~-----~   52 (291)
                      +.++.|++.||+|||+   . +|+||||||+|||++.++.                       ++.|+|||.+.     .
T Consensus       127 ~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  203 (318)
T 2dyl_A          127 GKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTK  203 (318)
T ss_dssp             HHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC--------------CCTTCCHHHHC------
T ss_pred             HHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccccCCCccccChhhcccccccc
Confidence            4789999999999998   6 9999999999999987643                       77899999985     4


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++||||||+++|||++|+.||......      .... .....+.....       +........+.+++.+||+
T Consensus       204 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~-~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~  269 (318)
T 2dyl_A          204 PDYDIRADVWSLGISLVELATGQFPYKNCKTD------FEVL-TKVLQEEPPLL-------PGHMGFSGDFQSFVKDCLT  269 (318)
T ss_dssp             --CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHH-HHHHHSCCCCC-------CSSSCCCHHHHHHHHHHTC
T ss_pred             cCCccccchhhHHHHHHHHHhCCCCCCCCCcc------HHHH-HHHhccCCCCC-------CccCCCCHHHHHHHHHHcc
Confidence            56888999999999999999999998653221      1111 11111111110       1111234678899999999


Q ss_pred             cCCCCCCCCCccc
Q 022858          133 YKPEAMPSMTVRP  145 (291)
Q Consensus       133 ~~p~~RPs~~~v~  145 (291)
                      .||.+||++.++.
T Consensus       270 ~dp~~Rps~~~ll  282 (318)
T 2dyl_A          270 KDHRKRPKYNKLL  282 (318)
T ss_dssp             SCTTTSCCHHHHT
T ss_pred             CChhHCcCHHHHh
Confidence            9999999999993

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.86  E-value=6.6e-23  Score=189.13  Aligned_cols=134  Identities=27%  Similarity=0.286  Sum_probs=101.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.||+.||+|||+   .+|+||||||+|||++.+..                          |+.|+|||.+. ..+
T Consensus       149 ~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~  224 (504)
T 3q5i_A          149 ANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKY  224 (504)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCB
T ss_pred             HHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCC
Confidence            5689999999999999   99999999999999986531                          78899999877 468


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||+||++|+|++|..||......        .+...+..+.......      ........+.+++.+||+.||
T Consensus       225 ~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~~~~------~~~~~s~~~~~li~~~L~~dp  290 (504)
T 3q5i_A          225 NEKCDVWSCGVIMYILLCGYPPFGGQNDQ--------DIIKKVEKGKYYFDFN------DWKNISDEAKELIKLMLTYDY  290 (504)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCHH------HHTTSCHHHHHHHHHHTCSST
T ss_pred             CchHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCCCCcc------ccCCCCHHHHHHHHHHcCCCh
Confidence            99999999999999999999999755421        1222232222111000      011234678899999999999


Q ss_pred             CCCCCCCccchhhhhhcc
Q 022858          136 EAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~  153 (291)
                      .+|||+.|+....++...
T Consensus       291 ~~R~t~~e~l~h~~~~~~  308 (504)
T 3q5i_A          291 NKRCTAEEALNSRWIKKY  308 (504)
T ss_dssp             TTSCCHHHHHTSHHHHHT
T ss_pred             hHCCCHHHHhcCHhhhhc
Confidence            999999999444455443

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.86  E-value=1.9e-23  Score=194.10  Aligned_cols=134  Identities=22%  Similarity=0.220  Sum_probs=100.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +.++.||+.||+|||+   .+|+||||||+|||++.++.                       |+.|+|||++.+..++.+
T Consensus       289 ~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~  365 (576)
T 2acx_A          289 VFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS  365 (576)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSH
T ss_pred             HHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccCccccccCCCccccCHHHHcCCCCCcc
Confidence            4688999999999999   99999999999999987643                       788999999999899999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|||||||++|||++|..||.......    ....+...+....          ...+......+.+++.+||+.||.+|
T Consensus       366 ~DiwSLGvilyeLltG~~PF~~~~~~~----~~~~i~~~i~~~~----------~~~p~~~s~~~~dLI~~lL~~dP~~R  431 (576)
T 2acx_A          366 PDWWALGCLLYEMIAGQSPFQQRKKKI----KREEVERLVKEVP----------EEYSERFSPQARSLCSQLLCKDPAER  431 (576)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSSCSSSCC----CHHHHHHHHHHCC----------CCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             chHHHHHHHHHHHHhCCCCCcccccch----hHHHHHHHhhccc----------ccCCccCCHHHHHHHHHhccCCHHHc
Confidence            999999999999999999997654221    1122222221110          11112234678899999999999999


Q ss_pred             C-----CCCccchhhhhhc
Q 022858          139 P-----SMTVRPAKFMLHG  152 (291)
Q Consensus       139 P-----s~~~v~~~~~L~~  152 (291)
                      |     ++.|+.....+.+
T Consensus       432 ~g~~~~sa~eil~HpfF~~  450 (576)
T 2acx_A          432 LGCRGGSAREVKEHPLFKK  450 (576)
T ss_dssp             TTCSSSHHHHHHTSGGGTT
T ss_pred             CCCCCCCHHHHHhChhhcc
Confidence            9     4566633333433

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.86  E-value=1.8e-23  Score=179.17  Aligned_cols=132  Identities=15%  Similarity=0.106  Sum_probs=97.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----CCccccCccccCCCCccccceechhHHHHHHhhCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRM   77 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p   77 (291)
                      ++|+.|++.||+|||+   .+|+||||||+|||++.++.    ++.|++|       ++.++|||||||++|||++|+.|
T Consensus       132 ~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~~~~~-------~~~~~Di~slG~il~elltg~~P  201 (286)
T 3uqc_A          132 IRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPATMPD-------ANPQDDIRGIGASLYALLVNRWP  201 (286)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCCCCTT-------CCHHHHHHHHHHHHHHHHHSEEC
T ss_pred             HHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEeccccCC-------CCchhHHHHHHHHHHHHHHCCCC
Confidence            5689999999999999   99999999999999998865    6667764       68999999999999999999999


Q ss_pred             cccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcccccc
Q 022858           78 RTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      |..............    .. .+.....      .......+..+.+++.+||+.||++| |+.|+  ++.|+......
T Consensus       202 f~~~~~~~~~~~~~~----~~-~~~~~~~------~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el--~~~L~~~~~~~  267 (286)
T 3uqc_A          202 LPEAGVRSGLAPAER----DT-AGQPIEP------ADIDRDIPFQISAVAARSVQGDGGIR-SASTL--LNLMQQATAVA  267 (286)
T ss_dssp             SCCCSBCCCSEECCB----CT-TSCBCCH------HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHH--HHHHHHHHC--
T ss_pred             CCcCCcchhhHHHHH----Hh-ccCCCCh------hhcccCCCHHHHHHHHHHcccCCccC-CHHHH--HHHHHHHhccC
Confidence            987654321100000    00 0000000      01112234678899999999999999 99999  99998876543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.86  E-value=2.9e-23  Score=179.82  Aligned_cols=136  Identities=13%  Similarity=0.168  Sum_probs=95.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccC-
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMS-   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~-   52 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.+..                            +..|+|||.+.+ 
T Consensus       123 ~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  199 (320)
T 2i6l_A          123 RLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSP  199 (320)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCT
T ss_pred             HHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCc
Confidence            4688999999999999   99999999999999974321                            566999998865 


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhh----------cCccchhhhhcccc------cch
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLE----------KGEFQDLIIVCGME------KNN  116 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~------~~~  116 (291)
                      ..++.++||||||+++|||++|+.||.......    ....+.....          ...+...+......      ...
T Consensus       200 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (320)
T 2i6l_A          200 NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE----QMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLL  275 (320)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHS
T ss_pred             ccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhc
Confidence            678999999999999999999999997554210    0010000000          00000011000000      001


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          117 KEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       117 ~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ......+.+++.+||+.||++||++.++
T Consensus       276 ~~~~~~~~~li~~~L~~dP~~Rpt~~el  303 (320)
T 2i6l_A          276 PGISREAVDFLEQILTFSPMDRLTAEEA  303 (320)
T ss_dssp             TTCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             chhhHHHHHHHHHHcCCCccccCCHHHH
Confidence            1235678899999999999999999999

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.86  E-value=1.3e-22  Score=182.21  Aligned_cols=134  Identities=17%  Similarity=0.233  Sum_probs=98.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCC--
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFP--   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~--   54 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                         |+.|+|||++.+..  
T Consensus       171 ~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~  247 (410)
T 3v8s_A          171 RFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD  247 (410)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTT
T ss_pred             HHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCC
Confidence            3578999999999999   99999999999999986643                         88999999998654  


Q ss_pred             --CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           55 --VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        55 --~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                        ++.++|||||||++|||++|+.||......       . ....+..+.      .....+........+.+++.+||+
T Consensus       248 ~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-------~-~~~~i~~~~------~~~~~p~~~~~s~~~~~li~~lL~  313 (410)
T 3v8s_A          248 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-------G-TYSKIMNHK------NSLTFPDDNDISKEAKNLICAFLT  313 (410)
T ss_dssp             CEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-------H-HHHHHHTHH------HHCCCCTTCCCCHHHHHHHHHHSS
T ss_pred             cCCCCcceEecchHHHHHHHhCCCCCCCCChh-------h-HHHHHHhcc------ccccCCCcccccHHHHHHHHHHcc
Confidence              889999999999999999999999755421       1 111111100      000001111234677889999999


Q ss_pred             cCCCC--CCCCCccchhhhhhc
Q 022858          133 YKPEA--MPSMTVRPAKFMLHG  152 (291)
Q Consensus       133 ~~p~~--RPs~~~v~~~~~L~~  152 (291)
                      .+|.+  ||++.||.....+.+
T Consensus       314 ~~~~rlgR~~~~ei~~Hp~f~~  335 (410)
T 3v8s_A          314 DREVRLGRNGVEEIKRHLFFKN  335 (410)
T ss_dssp             CGGGCTTSSCHHHHHTSGGGCC
T ss_pred             ChhhhCCCCCHHHHhcCccccC
Confidence            98988  999999944445544

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.86  E-value=7.7e-23  Score=175.70  Aligned_cols=126  Identities=23%  Similarity=0.285  Sum_probs=96.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCcccc------C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWM------S   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~------~   52 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.++.                       ++.|+|||.+.      .
T Consensus       127 ~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  203 (298)
T 1phk_A          127 RKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNH  203 (298)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTS
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccchhhcCCCcccccccCCccccCHHHhcccccccc
Confidence            5789999999999999   99999999999999987643                       67899999885      4


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++||||||+++|||++|..||......        .....+..+....      ..+.....+..+.+++.+||+
T Consensus       204 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~  269 (298)
T 1phk_A          204 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--------LMLRMIMSGNYQF------GSPEWDDYSDTVKDLVSRFLV  269 (298)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCC------CTTTGGGSCHHHHHHHHHHCC
T ss_pred             ccCCcccccHhHHHHHHHHHHCCCCCcCccHH--------HHHHHHhcCCccc------CcccccccCHHHHHHHHHHcc
Confidence            56889999999999999999999998654321        1112222211110      011112334678899999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .||++||++.++
T Consensus       270 ~dp~~Rps~~~l  281 (298)
T 1phk_A          270 VQPQKRYTAEEA  281 (298)
T ss_dssp             SSGGGSCCHHHH
T ss_pred             CCcccCCCHHHH
Confidence            999999999999

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.86  E-value=8.8e-23  Score=186.09  Aligned_cols=70  Identities=29%  Similarity=0.398  Sum_probs=61.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------------------   40 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------------------   40 (291)
                      ..|+.||+.||+|||+   .+||||||||+|||++.++.                                         
T Consensus       159 ~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (458)
T 3rp9_A          159 KTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKN  235 (458)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC------------------
T ss_pred             HHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCcccccccccccccccc
Confidence            4688999999999999   99999999999999986532                                         


Q ss_pred             ----------CCccccCcccc-CCCCccccceechhHHHHHHhhC
Q 022858           41 ----------TPGYAAPETWM-SFPVTHKCDVRSFGMLLFEILGR   74 (291)
Q Consensus        41 ----------t~~y~aPE~~~-~~~~~~~~Dv~s~G~~l~elltg   74 (291)
                                |+.|+|||++. ...++.++|||||||++|||++|
T Consensus       236 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          236 LKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             ---------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             ccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence                      55699999864 56799999999999999999994

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.86  E-value=3.3e-23  Score=187.48  Aligned_cols=136  Identities=19%  Similarity=0.248  Sum_probs=98.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCcccc-----
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWM-----   51 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~-----   51 (291)
                      ..++.||+.||+|||+   .+||||||||+|||++.++.                         |+.|+|||++.     
T Consensus       178 ~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~  254 (437)
T 4aw2_A          178 RFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGG  254 (437)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccC
Confidence            3588999999999999   99999999999999986543                         78899999987     


Q ss_pred             CCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcc
Q 022858           52 SFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRV  131 (291)
Q Consensus        52 ~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  131 (291)
                      ...++.++|||||||++|||++|+.||......+    ....+......-.+.         .........+.+++.+|+
T Consensus       255 ~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~----~~~~i~~~~~~~~~p---------~~~~~~s~~~~dLi~~lL  321 (437)
T 4aw2_A          255 KGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE----TYGKIMNHKERFQFP---------TQVTDVSENAKDLIRRLI  321 (437)
T ss_dssp             CCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHHHHTHHHHCCCC---------SSCCCSCHHHHHHHHTTS
T ss_pred             CCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH----HHHhhhhccccccCC---------cccccCCHHHHHHHHHHh
Confidence            4578999999999999999999999997554220    111111000000010         111123456788889999


Q ss_pred             ccCCCC--CCCCCccchhhhhhcc
Q 022858          132 QYKPEA--MPSMTVRPAKFMLHGS  153 (291)
Q Consensus       132 ~~~p~~--RPs~~~v~~~~~L~~~  153 (291)
                      ..+|++  ||++.|+.....+.++
T Consensus       322 ~~~~~r~~r~~~~eil~Hpff~~i  345 (437)
T 4aw2_A          322 CSREHRLGQNGIEDFKKHPFFSGI  345 (437)
T ss_dssp             SCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred             cccccccCCCCHHHHhCCCccCCC
Confidence            888877  9999998444455443

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.86  E-value=3.8e-23  Score=178.95  Aligned_cols=116  Identities=22%  Similarity=0.247  Sum_probs=91.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEc-cCCC----------------------CCccccCccccCCCC-cc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD-VKFW----------------------TPGYAAPETWMSFPV-TH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~-~~~~----------------------t~~y~aPE~~~~~~~-~~   57 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++ .++.                      +..|+|||++.+..+ +.
T Consensus       142 ~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  218 (312)
T 2iwi_A          142 RCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHAL  218 (312)
T ss_dssp             HHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHH
T ss_pred             HHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCc
Confidence            5689999999999999   9999999999999998 4321                      678999999877655 45


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||||+++|||++|+.||......             . ....          ..+......+.+++.+||+.||++
T Consensus       219 ~~Di~slG~il~~l~~g~~pf~~~~~~-------------~-~~~~----------~~~~~~~~~~~~li~~~l~~~p~~  274 (312)
T 2iwi_A          219 PATVWSLGILLYDMVCGDIPFERDQEI-------------L-EAEL----------HFPAHVSPDCCALIRRCLAPKPSS  274 (312)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCSHHHH-------------H-HTCC----------CCCTTSCHHHHHHHHHHTCSSTTT
T ss_pred             cchHHHHHHHHHHHHHCCCCCCChHHH-------------h-hhcc----------CCcccCCHHHHHHHHHHccCChhh
Confidence            899999999999999999998643210             0 0000          011123356788999999999999


Q ss_pred             CCCCCcc
Q 022858          138 MPSMTVR  144 (291)
Q Consensus       138 RPs~~~v  144 (291)
                      ||++.|+
T Consensus       275 Rps~~e~  281 (312)
T 2iwi_A          275 RPSLEEI  281 (312)
T ss_dssp             SCCHHHH
T ss_pred             CcCHHHH
Confidence            9999999

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.85  E-value=9.3e-23  Score=179.06  Aligned_cols=134  Identities=15%  Similarity=0.141  Sum_probs=96.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCC-CCcc-
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSF-PVTH-   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~-~~~~-   57 (291)
                      +.++.|++.||+|||+  ..+|+||||||+||+++.++.                      ++.|+|||.+.+. .++. 
T Consensus       154 ~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  231 (348)
T 2pml_X          154 KCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGA  231 (348)
T ss_dssp             HHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHH
T ss_pred             HHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcc
Confidence            5689999999999997  279999999999999987643                      7789999999887 6766 


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhh---------hcccccchHHHHHHHHHHHH
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLII---------VCGMEKNNKEKAERMALVAL  128 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~  128 (291)
                      ++||||||+++|||++|..||......       ......+..+......+         +.............+.+++.
T Consensus       232 ~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  304 (348)
T 2pml_X          232 KVDIWSLGICLYVMFYNVVPFSLKISL-------VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLK  304 (348)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSCS-------HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCcH-------HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHH
Confidence            999999999999999999999754421       11222222221110000         00000001233567889999


Q ss_pred             HccccCCCCCCCCCcc
Q 022858          129 WRVQYKPEAMPSMTVR  144 (291)
Q Consensus       129 ~cl~~~p~~RPs~~~v  144 (291)
                      +||+.||.+||++.|+
T Consensus       305 ~~L~~dP~~Rps~~e~  320 (348)
T 2pml_X          305 LFLRKNPAERITSEDA  320 (348)
T ss_dssp             HHCCSSGGGSCCHHHH
T ss_pred             HHccCChhhCCCHHHH
Confidence            9999999999999999

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.85  E-value=7.4e-23  Score=175.12  Aligned_cols=125  Identities=26%  Similarity=0.318  Sum_probs=94.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|++.||+|||+   .+|+||||||+||+++.+..                          ++.|+|||.+.+ .+
T Consensus       124 ~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~  199 (287)
T 2wei_A          124 ARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TY  199 (287)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTT-CC
T ss_pred             HHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccccChHHhcC-CC
Confidence            5789999999999999   99999999999999975321                          557999998875 58


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||||+++|+|++|..||......        .....+..+.....      .+........+.+++.+|++.||
T Consensus       200 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~dp  265 (287)
T 2wei_A          200 DEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRVETGKYAFD------LPQWRTISDDAKDLIRKMLTFHP  265 (287)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCC------SGGGTTSCHHHHHHHHHHTCSSG
T ss_pred             CCchhhHhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCCCC------chhhhhcCHHHHHHHHHHcccCh
Confidence            89999999999999999999998654321        12222222221110      01112234678899999999999


Q ss_pred             CCCCCCCcc
Q 022858          136 EAMPSMTVR  144 (291)
Q Consensus       136 ~~RPs~~~v  144 (291)
                      ++||++.++
T Consensus       266 ~~Rps~~el  274 (287)
T 2wei_A          266 SLRITATQC  274 (287)
T ss_dssp             GGSCCHHHH
T ss_pred             hhCcCHHHH
Confidence            999999999

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.85  E-value=6.9e-23  Score=184.09  Aligned_cols=133  Identities=19%  Similarity=0.205  Sum_probs=94.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCcccc-----
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWM-----   51 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~-----   51 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.++.                         |+.|+|||++.     
T Consensus       165 ~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~  241 (412)
T 2vd5_A          165 RFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGG  241 (412)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccC
Confidence            3578999999999999   99999999999999986543                         78899999987     


Q ss_pred             --CCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHH
Q 022858           52 --SFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALW  129 (291)
Q Consensus        52 --~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  129 (291)
                        ...++.++|||||||++|||++|+.||......       + ....+....     ...............+.+++.+
T Consensus       242 ~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-------~-~~~~i~~~~-----~~~~~p~~~~~~s~~~~dli~~  308 (412)
T 2vd5_A          242 PGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA-------E-TYGKIVHYK-----EHLSLPLVDEGVPEEARDFIQR  308 (412)
T ss_dssp             TTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------H-HHHHHHTHH-----HHCCCC----CCCHHHHHHHHT
T ss_pred             cCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-------H-HHHHHHhcc-----cCcCCCccccCCCHHHHHHHHH
Confidence              357899999999999999999999999754421       1 111111000     0000001112234678899999


Q ss_pred             ccccCCCCC---CCCCccchhhhhh
Q 022858          130 RVQYKPEAM---PSMTVRPAKFMLH  151 (291)
Q Consensus       130 cl~~~p~~R---Ps~~~v~~~~~L~  151 (291)
                      ||. +|.+|   |++.|+.....+.
T Consensus       309 lL~-~p~~Rlgr~~~~ei~~Hpff~  332 (412)
T 2vd5_A          309 LLC-PPETRLGRGGAGDFRTHPFFF  332 (412)
T ss_dssp             TSS-CGGGCTTTTTHHHHHTSGGGT
T ss_pred             HcC-ChhhcCCCCCHHHHhcCCCcC
Confidence            999 99998   5777773333443

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.85  E-value=1.4e-22  Score=183.56  Aligned_cols=75  Identities=29%  Similarity=0.350  Sum_probs=65.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------------------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------------------   40 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------------------   40 (291)
                      ..|+.||+.||+|||+   .+|+||||||+|||++.++.                                         
T Consensus       132 ~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (432)
T 3n9x_A          132 KTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQL  208 (432)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC-----------------------------
T ss_pred             HHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccc
Confidence            4689999999999999   99999999999999986632                                         


Q ss_pred             -----CCccccCccc-cCCCCccccceechhHHHHHHhhCCCccc
Q 022858           41 -----TPGYAAPETW-MSFPVTHKCDVRSFGMLLFEILGRRRMRT   79 (291)
Q Consensus        41 -----t~~y~aPE~~-~~~~~~~~~Dv~s~G~~l~elltg~~p~~   79 (291)
                           |+.|+|||++ ....++.++||||+||++|||++|..|+.
T Consensus       209 ~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          209 TSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             --CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             cCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence                 5669999986 45679999999999999999998666554

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.85  E-value=4.4e-22  Score=187.14  Aligned_cols=140  Identities=19%  Similarity=0.137  Sum_probs=94.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.++.                          ++.|+|||.+.+..+
T Consensus       124 ~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~  200 (676)
T 3qa8_A          124 RTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKY  200 (676)
T ss_dssp             HHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCC
T ss_pred             HHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChHHhccCCC
Confidence            5789999999999999   99999999999999985431                          778999999999999


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCC-chhHHHHHH-h----hcCccchhhhhcccccchHHHHHHHHHHHHH
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFP-SGFKWVWKK-L----EKGEFQDLIIVCGMEKNNKEKAERMALVALW  129 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~-~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  129 (291)
                      +.++||||||+++|||++|..||.......... ......... .    ..+.....................+.+++.+
T Consensus       201 s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~  280 (676)
T 3qa8_A          201 TVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQC  280 (676)
T ss_dssp             STTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHH
Confidence            999999999999999999999996532110000 000000000 0    0000000000001112233456788999999


Q ss_pred             ccccCCCCCCCCCcc
Q 022858          130 RVQYKPEAMPSMTVR  144 (291)
Q Consensus       130 cl~~~p~~RPs~~~v  144 (291)
                      |++.||++||++.++
T Consensus       281 mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          281 MLMWHQRQRGTDPQN  295 (676)
T ss_dssp             HSCSSCC---CCTTC
T ss_pred             HccCCHhhCcCHHHH
Confidence            999999999999886

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.83  E-value=4.1e-22  Score=171.14  Aligned_cols=124  Identities=22%  Similarity=0.213  Sum_probs=89.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------------------CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------------------TPG   43 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------------------t~~   43 (291)
                      +.++.|++.||+|||+   .+|+||||||+|||++.++.                                      ++.
T Consensus       119 ~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (303)
T 1zy4_A          119 WRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAM  195 (303)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CT
T ss_pred             HHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCccc
Confidence            4689999999999999   99999999999999986542                                      456


Q ss_pred             cccCccccCC-CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHH
Q 022858           44 YAAPETWMSF-PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAER  122 (291)
Q Consensus        44 y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (291)
                      |+|||.+.+. .++.++||||||+++|||++   |+.....       .......+.....      ..........+..
T Consensus       196 y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~-------~~~~~~~~~~~~~------~~~~~~~~~~~~~  259 (303)
T 1zy4_A          196 YVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME-------RVNILKKLRSVSI------EFPPDFDDNKMKV  259 (303)
T ss_dssp             TSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH-------HHHHHHHHHSTTC------CCCTTCCTTTSHH
T ss_pred             ccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh-------HHHHHHhcccccc------ccCccccccchHH
Confidence            9999998864 78999999999999999998   3322111       0111112211110      0011122233466


Q ss_pred             HHHHHHHccccCCCCCCCCCcc
Q 022858          123 MALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       123 ~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      +.+++.+||+.||.+|||+.++
T Consensus       260 ~~~li~~~l~~dp~~Rps~~~l  281 (303)
T 1zy4_A          260 EKKIIRLLIDHDPNKRPGARTL  281 (303)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHHHHHHHhcCcccCcCHHHH
Confidence            7899999999999999999999

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.83  E-value=1.6e-21  Score=167.87  Aligned_cols=139  Identities=18%  Similarity=0.225  Sum_probs=90.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccC---CC--CCccccCccccCCCCccccceechhHHHHHHhhCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK---FW--TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRR   76 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~---~~--t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~   76 (291)
                      +.|+.|++.||+|||+   .+|+||||||+|||++.+   ..  -..|-..+...+..++.++|||||||++|||++|..
T Consensus       120 ~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~DiwslG~il~el~tg~~  196 (299)
T 3m2w_A          120 SEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCGYP  196 (299)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTTCGGGGHHHHHHHHHHHHHHHHSSC
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccccccccccCCchhhHHHHHHHHHHHHHCCC
Confidence            5789999999999999   999999999999999974   22  011212233445678999999999999999999999


Q ss_pred             ccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858           77 MRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      ||..............    ....+.. ..     ...........+.+++.+||+.||.+||++.|+.....+...
T Consensus       197 pf~~~~~~~~~~~~~~----~~~~~~~-~~-----~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~  263 (299)
T 3m2w_A          197 PFYSNHGLAISPGMKT----RIRMGQY-EF-----PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  263 (299)
T ss_dssp             SCCC-------CCSCC----SSCTTCC-SS-----CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTG
T ss_pred             CCCCCcchhhhHHHHH----HHhhccc-cC-----CchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccc
Confidence            9965543211000000    0000000 00     000011234678899999999999999999999333344443

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.82  E-value=3.1e-21  Score=184.08  Aligned_cols=123  Identities=19%  Similarity=0.202  Sum_probs=94.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC-------------------CCCccccCccccCCCCcccccee
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-------------------WTPGYAAPETWMSFPVTHKCDVR   62 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~-------------------~t~~y~aPE~~~~~~~~~~~Dv~   62 (291)
                      +.|+.||+.||+|||+   .+||||||||+|||++.+.                   +|+.|+|||++.+.. +.++|||
T Consensus       185 ~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~gt~~y~aPE~~~~~~-~~~sDi~  260 (681)
T 2pzi_A          185 IAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTGP-TVATDIY  260 (681)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSCEEECCCTTCEETTCCSCCCCCTTTSCTTHHHHCS-CHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCCcEEEEecccchhcccCCccCCCccccCHHHHcCCC-CCceehh
Confidence            5789999999999999   9999999999999998642                   188999999987654 8899999


Q ss_pred             chhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCCCCC
Q 022858           63 SFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT  142 (291)
Q Consensus        63 s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~  142 (291)
                      ||||++|||++|..|+........                 ..       ..........+.+++.+||+.||++||+..
T Consensus       261 slG~~l~~l~~g~~~~~~~~~~~~-----------------~~-------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~  316 (681)
T 2pzi_A          261 TVGRTLAALTLDLPTRNGRYVDGL-----------------PE-------DDPVLKTYDSYGRLLRRAIDPDPRQRFTTA  316 (681)
T ss_dssp             HHHHHHHHHHSCCCEETTEECSSC-----------------CT-------TCHHHHHCHHHHHHHHHHTCSSGGGSCSSH
T ss_pred             hhHHHHHHHHhCCCCCcccccccc-----------------cc-------cccccccCHHHHHHHhhhccCChhhCCCHH
Confidence            999999999999988765432100                 00       001122336788999999999999999765


Q ss_pred             ccchhhhhhcc
Q 022858          143 VRPAKFMLHGS  153 (291)
Q Consensus       143 ~v~~~~~L~~~  153 (291)
                      +.. ...|...
T Consensus       317 ~~l-~~~l~~~  326 (681)
T 2pzi_A          317 EEM-SAQLTGV  326 (681)
T ss_dssp             HHH-HHHHHHH
T ss_pred             HHH-HHHHHHH
Confidence            541 4444443

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.72  E-value=8.8e-19  Score=153.14  Aligned_cols=123  Identities=10%  Similarity=-0.012  Sum_probs=88.3

Q ss_pred             hhHHHHHHHHHHHHh-cCCCCCeEeecCCCCcEEEccCC--------------------C-------------------C
Q 022858            2 HIIAIGTAEGIVSLH-DGCQQQIIHYNIKPENILLDVKF--------------------W-------------------T   41 (291)
Q Consensus         2 l~i~~~ia~gL~ylH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~-------------------t   41 (291)
                      ..|+.||+.||+||| +   .+|+||||||+|||++.++                    .                   |
T Consensus       164 ~~i~~qi~~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt  240 (336)
T 2vuw_A          164 KSILHQLTASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFC  240 (336)
T ss_dssp             HHHHHHHHHHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECC
T ss_pred             HHHHHHHHHHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEe
Confidence            568999999999999 8   9999999999999999774                    1                   8


Q ss_pred             CccccCccccCCCCccccceechhHH-HHHHhhCCCccccccccCCCCchhHHHHHHhh-cCccchhhhhcccccchHHH
Q 022858           42 PGYAAPETWMSFPVTHKCDVRSFGML-LFEILGRRRMRTCQKARSGFPSGFKWVWKKLE-KGEFQDLIIVCGMEKNNKEK  119 (291)
Q Consensus        42 ~~y~aPE~~~~~~~~~~~Dv~s~G~~-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  119 (291)
                      +.|+|||++.+.. +.++||||++++ .+++++|..||.....       ......... .....    ...........
T Consensus       241 ~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~----~~~~~~~~~~~  308 (336)
T 2vuw_A          241 DVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW-------LHYLTDKMLKQMTFK----TKCNTPAMKQI  308 (336)
T ss_dssp             CCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH-------HHHHHHHHHHTCCCS----SCCCSHHHHHH
T ss_pred             ecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhh-------hhHHHHhhhhhhccC----cccchhhhhhc
Confidence            8999999998766 889999998777 6778899998854210       000111111 10000    00111223456


Q ss_pred             HHHHHHHHHHccccCCCCCCCCCcc
Q 022858          120 AERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       120 ~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ...+.+++.+||+.|     |+.|+
T Consensus       309 s~~~~dli~~~L~~d-----sa~e~  328 (336)
T 2vuw_A          309 KRKIQEFHRTMLNFS-----SATDL  328 (336)
T ss_dssp             HHHHHHHHHHGGGSS-----SHHHH
T ss_pred             CHHHHHHHHHHhccC-----CHHHH
Confidence            788999999999976     77776

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.51  E-value=5.7e-16  Score=144.49  Aligned_cols=72  Identities=15%  Similarity=0.093  Sum_probs=48.0

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCccc
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      +|+.||+.||+|||+   ++||||||||+|||++.++.                        |+.|||||++.+ .+..+
T Consensus       343 ~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~  418 (569)
T 4azs_A          343 KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE-NKSWN  418 (569)
T ss_dssp             HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC--------
T ss_pred             HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCC-CCCCc
Confidence            588999999999999   99999999999999997754                        788999999876 46678


Q ss_pred             cceechhHHHHHHhhCCCcc
Q 022858           59 CDVRSFGMLLFEILGRRRMR   78 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~   78 (291)
                      +|+|++|++++++.++..++
T Consensus       419 ~d~~s~g~~~~~l~~~~~~~  438 (569)
T 4azs_A          419 GFWRSAPVHPFNLPQPWSNW  438 (569)
T ss_dssp             ----------CCCCTTHHHH
T ss_pred             ccccccccchhhhccccchh
Confidence            99999999988877665443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.15  E-value=6e-12  Score=116.68  Aligned_cols=75  Identities=23%  Similarity=0.215  Sum_probs=63.8

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccC-----CC------------------------CCccccCcccc
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK-----FW------------------------TPGYAAPETWM   51 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~-----~~------------------------t~~y~aPE~~~   51 (291)
                      ++.|+.|++.||+|||+   .+|+||||||+|||++..     ++                        |+.|||||++.
T Consensus       433 ~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~  509 (540)
T 3en9_A          433 NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDKDLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWE  509 (540)
T ss_dssp             CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESSSEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECCeEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHH
Confidence            35789999999999999   999999999999999861     11                        78999999998


Q ss_pred             C--CCCccccceechhHHHHHHhhCCCcc
Q 022858           52 S--FPVTHKCDVRSFGMLLFEILGRRRMR   78 (291)
Q Consensus        52 ~--~~~~~~~Dv~s~G~~l~elltg~~p~   78 (291)
                      .  ..|+..+|+|+..+-.++.+.++.+|
T Consensus       510 ~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          510 RFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            6  56888899999998888877666654

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.75  E-value=1.3e-09  Score=92.64  Aligned_cols=46  Identities=13%  Similarity=0.048  Sum_probs=39.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------CCccccCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------TPGYAAPETWM   51 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------t~~y~aPE~~~   51 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++ ++.           +..++|||.+.
T Consensus       196 ~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~-~~~vkl~DFG~a~~~~~~~a~e~l~  252 (282)
T 1zar_A          196 DEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS-EEGIWIIDFPQSVEVGEEGWREILE  252 (282)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-TTEEEECCCTTCEETTSTTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-CCcEEEEECCCCeECCCCCHHHHHH
Confidence            3688999999999999   9999999999999999 543           55678888764

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.34  E-value=3e-07  Score=76.85  Aligned_cols=33  Identities=18%  Similarity=0.221  Sum_probs=30.7

Q ss_pred             hhHHHHHHHHHHHHh-cCCCCCeEeecCCCCcEEEcc
Q 022858            2 HIIAIGTAEGIVSLH-DGCQQQIIHYNIKPENILLDV   37 (291)
Q Consensus         2 l~i~~~ia~gL~ylH-~~~~~~ivH~Dlkp~NIll~~   37 (291)
                      ..++.|++.||.||| +   .+|+||||||+|||++.
T Consensus       173 ~~i~~qi~~~l~~lH~~---~givHrDlkp~NILl~~  206 (258)
T 1zth_A          173 EGIFNDVVENVKRLYQE---AELVHADLSEYNIMYID  206 (258)
T ss_dssp             HHHHHHHHHHHHHHHHT---SCEECSSCSTTSEEESS
T ss_pred             HHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEEcC
Confidence            468899999999999 8   99999999999999986

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.12  E-value=1e-06  Score=77.61  Aligned_cols=34  Identities=21%  Similarity=0.196  Sum_probs=31.5

Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC
Q 022858            3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF   39 (291)
Q Consensus         3 ~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~   39 (291)
                      .++.|++.||.|||.   .+||||||||.|||++.++
T Consensus       209 ~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~dg  242 (397)
T 4gyi_A          209 SLYADLIALILRLAK---HGLIHGDFNEFNILIREEK  242 (397)
T ss_dssp             HHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEEE
T ss_pred             HHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCCC
Confidence            577899999999999   8999999999999998875

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=97.01  E-value=0.0003  Score=59.58  Aligned_cols=33  Identities=30%  Similarity=0.375  Sum_probs=29.8

Q ss_pred             CcccCHHHHHHHhhccc--------cccccCCCceeEEEEe
Q 022858          230 PIRFTSQQLSIATDNFT--------HLLVSGGSGALYKLQR  262 (291)
Q Consensus       230 ~~~fs~~el~~aT~nF~--------~~lG~GGfG~VYkG~l  262 (291)
                      ...|++.++..+|++|+        ++||+||||.||+|..
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~   52 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV   52 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE
Confidence            46699999999999999        3599999999999986

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=96.97  E-value=6.3e-05  Score=64.39  Aligned_cols=32  Identities=19%  Similarity=0.185  Sum_probs=24.5

Q ss_pred             ccCHHHHHHHhhccccccccCCCceeEEEEec
Q 022858          232 RFTSQQLSIATDNFTHLLVSGGSGALYKLQRD  263 (291)
Q Consensus       232 ~fs~~el~~aT~nF~~~lG~GGfG~VYkG~l~  263 (291)
                      ++++.|+..++-.|.++||+||||.||||++.
T Consensus        17 ~~~~~ei~~~~~~~~~~lG~G~fG~Vykg~~~   48 (308)
T 4gt4_A           17 QAKLKEISLSAVRFMEELGEDRFGKVYKGHLF   48 (308)
T ss_dssp             --CCCBCCGGGEEEEEEEEECSSCEEEEEEEC
T ss_pred             cCCcccCCHHHCeEeeEeccCCCcEEEEEEEc
Confidence            34555666666678899999999999999974

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=96.23  E-value=0.0012  Score=56.44  Aligned_cols=33  Identities=39%  Similarity=0.676  Sum_probs=30.5

Q ss_pred             CcccCHHHHHHHhhccc--cccccCCCceeEEEEe
Q 022858          230 PIRFTSQQLSIATDNFT--HLLVSGGSGALYKLQR  262 (291)
Q Consensus       230 ~~~fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l  262 (291)
                      ..+|+++++..++++|.  ..||+||||.||+|..
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~   51 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL   51 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECC
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEe
Confidence            46799999999999999  8999999999999974

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=96.22  E-value=0.00038  Score=59.28  Aligned_cols=40  Identities=20%  Similarity=0.250  Sum_probs=29.4

Q ss_pred             cCCcccCHHHHHHHh----------------hccc--cccccCCCceeEEEEeccccc
Q 022858          228 ENPIRFTSQQLSIAT----------------DNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       228 ~~~~~fs~~el~~aT----------------~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ..+++|++++...+|                ++|.  .+||+||||.||+|+...-+.
T Consensus        26 ~~p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~   83 (311)
T 3p1a_A           26 LQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGR   83 (311)
T ss_dssp             CCCEECCSSCCSCSSCCCTTCCTTSSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSC
T ss_pred             cCcceeeccCCCCcccCCCCCCCCCccchhhhheeeeheeccCCCeEEEEEEECCCCe
Confidence            445556666665555                6787  799999999999998765443

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=96.03  E-value=0.0036  Score=53.48  Aligned_cols=36  Identities=14%  Similarity=0.077  Sum_probs=28.9

Q ss_pred             cccCHHHHHHHhhc----------cc--cccccCCCceeEEEEecccc
Q 022858          231 IRFTSQQLSIATDN----------FT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       231 ~~fs~~el~~aT~n----------F~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ..|++++++++|++          |.  .+||+||||.||+|+...-+
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g   70 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSG   70 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTC
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCC
Confidence            45999999999986          44  68999999999999875433

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=95.92  E-value=0.0028  Score=54.03  Aligned_cols=19  Identities=26%  Similarity=0.401  Sum_probs=16.5

Q ss_pred             cccccccCCCceeEEEEec
Q 022858          245 FTHLLVSGGSGALYKLQRD  263 (291)
Q Consensus       245 F~~~lG~GGfG~VYkG~l~  263 (291)
                      |.++||+||||.||||+++
T Consensus        40 l~~~iG~G~fG~Vy~~~~~   58 (307)
T 3omv_A           40 LSTRIGSGSFGTVYKGKWH   58 (307)
T ss_dssp             EEEECCCCSSSEEEEEESS
T ss_pred             EeeEEeeCCCcEEEEEEEC
Confidence            4589999999999999854

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=95.63  E-value=0.0041  Score=53.57  Aligned_cols=22  Identities=14%  Similarity=0.170  Sum_probs=18.1

Q ss_pred             hccc--cccccCCCceeEEEEecc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      ++|.  .+||+||||.||+|++..
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~   64 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHN   64 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESS
T ss_pred             HHeEEEEEEccCCCcEEEEEEECC
Confidence            3454  789999999999999754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=95.50  E-value=0.0047  Score=52.41  Aligned_cols=19  Identities=16%  Similarity=0.102  Sum_probs=14.6

Q ss_pred             cccccCCCceeEEEEeccc
Q 022858          247 HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~  265 (291)
                      .+||+||||.||+|++...
T Consensus        19 ~~lG~G~fG~Vy~a~~~~~   37 (299)
T 4asz_A           19 RELGEGAFGKVFLAECYNL   37 (299)
T ss_dssp             EEEEC--CCCEEEEEECSC
T ss_pred             eEEeeCCCcEEEEEEECCc
Confidence            7899999999999987543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=95.45  E-value=0.0047  Score=55.38  Aligned_cols=35  Identities=11%  Similarity=0.220  Sum_probs=30.2

Q ss_pred             cccCHHHHHHHhhccc--cccccCCCceeEEEEeccc
Q 022858          231 IRFTSQQLSIATDNFT--HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       231 ~~fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l~~~  265 (291)
                      ..++++++...+++|.  .+||+||||.||+|+...-
T Consensus        62 ~~~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~   98 (437)
T 4aw2_A           62 FTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNA   98 (437)
T ss_dssp             HHHHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTT
T ss_pred             ccchhhcccCChhheEEEEEEEeCCCEEEEEEEEcCC
Confidence            3467888888999999  8999999999999998643

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=95.39  E-value=0.011  Score=48.37  Aligned_cols=16  Identities=19%  Similarity=0.254  Sum_probs=14.7

Q ss_pred             eEeecCCCCcEEEccC
Q 022858           23 IIHYNIKPENILLDVK   38 (291)
Q Consensus        23 ivH~Dlkp~NIll~~~   38 (291)
                      ++|+|++|.||+++.+
T Consensus       186 l~HgDl~~~Nil~~~~  201 (264)
T 1nd4_A          186 VTHGDACLPNIMVENG  201 (264)
T ss_dssp             EECSSCCGGGEEEETT
T ss_pred             EECCCCCCCcEEEECC
Confidence            9999999999999764

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=95.33  E-value=0.0015  Score=55.69  Aligned_cols=33  Identities=33%  Similarity=0.357  Sum_probs=26.9

Q ss_pred             cccCHHHHHHHhhccc--cccccCCCceeEEEEec
Q 022858          231 IRFTSQQLSIATDNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       231 ~~fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      .++.+.++..++++|.  ..||+||||.||+|+..
T Consensus        27 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~   61 (321)
T 2qkw_B           27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR   61 (321)
T ss_dssp             ---CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT
T ss_pred             eeecHHHHHHHHhccCccceeecCCCeeEEEEEEC
Confidence            4577778888999999  88999999999999853

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=94.70  E-value=0.021  Score=46.91  Aligned_cols=18  Identities=17%  Similarity=0.180  Sum_probs=15.4

Q ss_pred             CCeEeecCCCCcEEEccC
Q 022858           21 QQIIHYNIKPENILLDVK   38 (291)
Q Consensus        21 ~~ivH~Dlkp~NIll~~~   38 (291)
                      ..++|+|++|.||+++.+
T Consensus       183 ~~l~HgDl~~~Nil~~~~  200 (263)
T 3tm0_A          183 LVFSHGDLGDSNIFVKDG  200 (263)
T ss_dssp             EEEECSSCCTTSEEEETT
T ss_pred             ceEECCCCCcCcEEEECC
Confidence            348999999999999753

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=94.70  E-value=0.0085  Score=50.57  Aligned_cols=22  Identities=18%  Similarity=0.065  Sum_probs=17.5

Q ss_pred             cccccccCCCceeEEEEecccc
Q 022858          245 FTHLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       245 F~~~lG~GGfG~VYkG~l~~~~  266 (291)
                      |..+||+||||.||+|....-+
T Consensus        30 ~~~~iG~G~fg~Vy~a~~~~~~   51 (290)
T 3fpq_A           30 FDIEIGRGSFKTVYKGLDTETT   51 (290)
T ss_dssp             EEEEEEECSSEEEEEEEETTTC
T ss_pred             eeeEEecCcCcEEEEEEECCCC
Confidence            3468999999999999865443

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=94.66  E-value=0.0063  Score=51.50  Aligned_cols=18  Identities=28%  Similarity=0.599  Sum_probs=15.9

Q ss_pred             CCeEeecCCCCcEEEccC
Q 022858           21 QQIIHYNIKPENILLDVK   38 (291)
Q Consensus        21 ~~ivH~Dlkp~NIll~~~   38 (291)
                      ..++|+|++|.||+++.+
T Consensus       191 ~~~~HgD~~~~N~l~~~~  208 (304)
T 3sg8_A          191 PCLIHNDFSSDHILFDTE  208 (304)
T ss_dssp             CEEECSCCCGGGEEEETT
T ss_pred             ceeEeCCCCcccEEEeCC
Confidence            458999999999999874

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=94.56  E-value=0.0088  Score=52.14  Aligned_cols=24  Identities=13%  Similarity=0.194  Sum_probs=19.3

Q ss_pred             HHHhhccc--cccccCCCceeEEEEe
Q 022858          239 SIATDNFT--HLLVSGGSGALYKLQR  262 (291)
Q Consensus       239 ~~aT~nF~--~~lG~GGfG~VYkG~l  262 (291)
                      ...++.|.  ++||+|+||.||+++-
T Consensus        17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~   42 (361)
T 4f9c_A           17 PQLSNVFKIEDKIGEGTFSSVYLATA   42 (361)
T ss_dssp             GGGGGTCEEEEEEEECSSEEEEEEEE
T ss_pred             CCccCcEEEEEEEecccCcEEEEEEE
Confidence            34456677  8999999999999974

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=94.55  E-value=0.011  Score=51.36  Aligned_cols=23  Identities=17%  Similarity=0.096  Sum_probs=18.6

Q ss_pred             hccc--cccccCCCceeEEEEeccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~  265 (291)
                      ++|.  .+||+|+||.||+|.....
T Consensus        64 ~~~~l~~~LG~G~fG~Vy~a~~~~~   88 (353)
T 4ase_A           64 DRLKLGKPLGRGAFGQVIEADAFGI   88 (353)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEETS
T ss_pred             HHeEEeeEEecCCCeEEEEEEEcCC
Confidence            4555  8899999999999986543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=93.69  E-value=0.019  Score=50.91  Aligned_cols=37  Identities=14%  Similarity=0.207  Sum_probs=30.9

Q ss_pred             cccCHHHHHHHhhccc--cccccCCCceeEEEEeccccc
Q 022858          231 IRFTSQQLSIATDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       231 ~~fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ..+.++++...+++|.  ..||+||||.||+++...-++
T Consensus        49 ~~~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~   87 (412)
T 2vd5_A           49 IVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQ   87 (412)
T ss_dssp             HHHHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCC
T ss_pred             hhhhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCC
Confidence            4467888888899999  899999999999999865443

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=93.50  E-value=0.018  Score=49.69  Aligned_cols=25  Identities=12%  Similarity=0.088  Sum_probs=19.4

Q ss_pred             hhccc--cccccCCCceeEEEEecccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      .++|.  .+||+||||.||+++-..-+
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g   83 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTG   83 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCC
Confidence            35566  78999999999999865433

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=93.16  E-value=0.052  Score=46.87  Aligned_cols=19  Identities=16%  Similarity=0.354  Sum_probs=16.6

Q ss_pred             CCeEeecCCCCcEEEccCC
Q 022858           21 QQIIHYNIKPENILLDVKF   39 (291)
Q Consensus        21 ~~ivH~Dlkp~NIll~~~~   39 (291)
                      ..++|+|+++.|||++.+.
T Consensus       216 ~~lvHgD~~~~Nil~~~~~  234 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTE  234 (359)
T ss_dssp             CEEECSSCSGGGEEECSSS
T ss_pred             ceEEeCCCCCCcEEEeCCC
Confidence            5699999999999998763

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=93.13  E-value=0.024  Score=48.29  Aligned_cols=23  Identities=13%  Similarity=0.162  Sum_probs=19.0

Q ss_pred             hccc--cccccCCCceeEEEEeccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~  265 (291)
                      +||.  ..||+||||.||+++-..-
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~   56 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELAT   56 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTT
T ss_pred             cccEEEEEEecccCeEEEEEEECCC
Confidence            4677  8999999999999986543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=93.12  E-value=0.03  Score=48.41  Aligned_cols=23  Identities=9%  Similarity=-0.013  Sum_probs=18.3

Q ss_pred             ccc--cccccCCCceeEEEEecccc
Q 022858          244 NFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      .|.  .+||+||||.||+++-..-+
T Consensus        75 ~y~~~~~iG~G~fG~V~~a~~~~tg   99 (346)
T 4fih_A           75 YLDNFIKIGEGSTGIVCIATVRSSG   99 (346)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTC
T ss_pred             hcEEeEEeecCcCeEEEEEEECCCC
Confidence            355  78999999999999865433

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=93.09  E-value=0.035  Score=47.28  Aligned_cols=35  Identities=26%  Similarity=0.213  Sum_probs=18.0

Q ss_pred             cCHHHHHHHhhccc-----------cccccCCCceeEEEEeccccc
Q 022858          233 FTSQQLSIATDNFT-----------HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       233 fs~~el~~aT~nF~-----------~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .++.+...++.+|.           ..||+||||.||+|....-++
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~   75 (325)
T 3kul_A           30 HTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQ   75 (325)
T ss_dssp             -------------CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTS
T ss_pred             ccccCccccchhhccccChhHeEEeeEEEeCCCcEEEEEEEecCCC
Confidence            46666666666654           579999999999999865444

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=93.00  E-value=0.029  Score=47.65  Aligned_cols=20  Identities=20%  Similarity=0.544  Sum_probs=16.8

Q ss_pred             hccc--cccccCCCceeEEEEe
Q 022858          243 DNFT--HLLVSGGSGALYKLQR  262 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l  262 (291)
                      ++|.  ..||+||||.||+++-
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~   45 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKK   45 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEE
Confidence            3466  8999999999999964

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=92.85  E-value=0.041  Score=47.65  Aligned_cols=24  Identities=8%  Similarity=0.097  Sum_probs=13.0

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ++|.  .+||+||||.||+++-..-+
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~   49 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDG   49 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTC
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCC
Confidence            4566  78999999999999865433

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=92.55  E-value=0.046  Score=45.66  Aligned_cols=24  Identities=17%  Similarity=0.116  Sum_probs=15.7

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ++|.  ..||+||||.||+++-..-+
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~   38 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTG   38 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTC
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCC
Confidence            4566  89999999999999865433

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=92.51  E-value=0.036  Score=49.07  Aligned_cols=33  Identities=9%  Similarity=0.231  Sum_probs=27.3

Q ss_pred             cCHHHHHHHhhccc--cccccCCCceeEEEEeccc
Q 022858          233 FTSQQLSIATDNFT--HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       233 fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l~~~  265 (291)
                      ....++...+++|.  ..||+||||.||+++...-
T Consensus        59 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~   93 (410)
T 3v8s_A           59 NKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKST   93 (410)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTT
T ss_pred             HHHHhcccCccccEEEEEEEcCCCEEEEEEEECCC
Confidence            35667777888999  8999999999999987643

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=92.50  E-value=0.039  Score=47.54  Aligned_cols=32  Identities=22%  Similarity=0.252  Sum_probs=28.0

Q ss_pred             ccCHHHHHHHhhccc--cccccCCCceeEEEEec
Q 022858          232 RFTSQQLSIATDNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       232 ~fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      +...+++...+++|.  ..||+||||.||+|.-.
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~   44 (362)
T 3pg1_A           11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDS   44 (362)
T ss_dssp             HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECT
T ss_pred             HHHHHHHHHhccceEEeEEeccCCCEEEEEEECC
Confidence            356788899999999  89999999999999753

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=92.47  E-value=0.069  Score=45.85  Aligned_cols=34  Identities=12%  Similarity=0.081  Sum_probs=16.4

Q ss_pred             CHHHHHHHhhccc--cccccCCCceeEEEEeccccc
Q 022858          234 TSQQLSIATDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       234 s~~el~~aT~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .-.+.....++|.  ..||+||||.||+|+...-+.
T Consensus        14 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~   49 (360)
T 3e3p_A           14 ADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGM   49 (360)
T ss_dssp             SSHHHHHHHTTEEEC----------CEEEEETTTCC
T ss_pred             hhhhchhhccceEEEEEEecCCCeEEEEEEECCCCC
Confidence            3445567778888  899999999999998754433

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=92.20  E-value=0.047  Score=48.56  Aligned_cols=23  Identities=9%  Similarity=-0.013  Sum_probs=18.5

Q ss_pred             ccc--cccccCCCceeEEEEecccc
Q 022858          244 NFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      .|.  .+||+|+||.||+++-..-+
T Consensus       152 ~y~~~~~iG~G~fG~V~~a~~~~tg  176 (423)
T 4fie_A          152 YLDNFIKIGEGSTGIVCIATVRSSG  176 (423)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTC
T ss_pred             hcEeeeEeccCcCcEEEEEEECCCC
Confidence            455  78999999999999875433

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=92.07  E-value=0.049  Score=47.09  Aligned_cols=23  Identities=17%  Similarity=0.329  Sum_probs=17.8

Q ss_pred             hhccc--cccccCCCceeEEEEecc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      +++|.  .+||+||||.||+|....
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~   58 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNS   58 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECC
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecC
Confidence            44666  899999999999997643

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=92.00  E-value=0.037  Score=47.54  Aligned_cols=30  Identities=13%  Similarity=0.296  Sum_probs=24.8

Q ss_pred             cCHHHHHHHhhccc--cccccCCCceeEEEEe
Q 022858          233 FTSQQLSIATDNFT--HLLVSGGSGALYKLQR  262 (291)
Q Consensus       233 fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l  262 (291)
                      ++.++..-.+++|.  .+||+||||.||+|+.
T Consensus        12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~   43 (359)
T 3vhe_A           12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADA   43 (359)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEE
T ss_pred             CCcccccccccceeeceeecCCCCceEEEEEe
Confidence            56666666678888  8999999999999985

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=91.99  E-value=0.047  Score=48.31  Aligned_cols=30  Identities=10%  Similarity=-0.022  Sum_probs=22.8

Q ss_pred             HHHHhhccc--cccccCCCceeEEEEeccccc
Q 022858          238 LSIATDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       238 l~~aT~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      +...+++|.  +.||+||||.||+|.....++
T Consensus        73 ~~~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~  104 (413)
T 3dzo_A           73 LGERPRTLVRGTVLGQEDPYAYLEATDQETGE  104 (413)
T ss_dssp             SSSCCEEEEEEEEEEEETTEEEEEEEETTTCC
T ss_pred             CCCCceeEEEecccccCCCEEEEEEEecCCCC
Confidence            334456676  789999999999999765554

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=91.92  E-value=0.047  Score=48.16  Aligned_cols=24  Identities=17%  Similarity=0.338  Sum_probs=18.8

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      +.|.  .+||+|+||.||+++-..-+
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~   79 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTG   79 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCC
Confidence            3455  79999999999999865433

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=91.64  E-value=0.015  Score=49.37  Aligned_cols=38  Identities=21%  Similarity=0.156  Sum_probs=28.0

Q ss_pred             ccCHHHHHHHhhccc--cccccCCCceeEEEEecccccce
Q 022858          232 RFTSQQLSIATDNFT--HLLVSGGSGALYKLQRDFWQQNQ  269 (291)
Q Consensus       232 ~fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l~~~~~~~  269 (291)
                      .++++++...++.|.  ..||+|+||.||+|....-++.-
T Consensus        13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~v   52 (326)
T 2x7f_A           13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLA   52 (326)
T ss_dssp             ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred             hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeE
Confidence            356667777788888  89999999999999986544433

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=91.62  E-value=0.07  Score=45.65  Aligned_cols=35  Identities=14%  Similarity=0.129  Sum_probs=23.6

Q ss_pred             cccCHHHHHHHhhcc----c--cccccCCCceeEEEEeccc
Q 022858          231 IRFTSQQLSIATDNF----T--HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       231 ~~fs~~el~~aT~nF----~--~~lG~GGfG~VYkG~l~~~  265 (291)
                      ..++.+++...++.|    .  ..||+||||.||+++-..-
T Consensus         8 ~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~   48 (335)
T 3dls_A            8 KAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEK   48 (335)
T ss_dssp             -CEECCHHHHHTTHHHHHEEEEEECSSSSSCSEEEEEETTT
T ss_pred             ccccccccccCCcccccceEEEeEEEecCCEEEEEEEECCC
Confidence            345555555554444    4  7899999999999975443

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=91.44  E-value=0.08  Score=44.92  Aligned_cols=22  Identities=23%  Similarity=-0.027  Sum_probs=18.4

Q ss_pred             cccccCCCceeEEEEecccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQN  268 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~~  268 (291)
                      ..||+||||.||+|....-++.
T Consensus        19 ~~lG~G~~g~Vy~~~~~~~~~~   40 (325)
T 3kex_A           19 KVLGSGVFGTVHKGVWIPEGES   40 (325)
T ss_dssp             EEEECCSSCEEEEEEECCTTCS
T ss_pred             eeeeecCCceEEEEEEcCCCce
Confidence            7899999999999997655543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=91.41  E-value=0.083  Score=45.80  Aligned_cols=22  Identities=32%  Similarity=0.271  Sum_probs=18.0

Q ss_pred             hccc--cccccCCCceeEEEEecc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      ++|.  .+||+||||.||+|++..
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~   94 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSG   94 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEcc
Confidence            3455  789999999999999653

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=91.37  E-value=0.059  Score=45.81  Aligned_cols=23  Identities=30%  Similarity=0.250  Sum_probs=17.8

Q ss_pred             ccc--cccccCCCceeEEEEecccc
Q 022858          244 NFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      +|.  .+||+||||.||+|+...-+
T Consensus        16 ~y~~~~~lG~G~~g~Vy~~~~~~~~   40 (327)
T 3poz_A           16 EFKKIKVLGSGAFGTVYKGLWIPEG   40 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECC--
T ss_pred             HcccceEEeeCCCeEEEEEEEcCCC
Confidence            355  79999999999999865443

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=91.31  E-value=0.064  Score=45.76  Aligned_cols=17  Identities=24%  Similarity=0.360  Sum_probs=15.3

Q ss_pred             cccccCCCceeEEEEec
Q 022858          247 HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~  263 (291)
                      ..||+||||.||+|...
T Consensus        50 ~~lG~G~~g~Vy~~~~~   66 (333)
T 1mqb_A           50 KVIGAGEFGEVYKGMLK   66 (333)
T ss_dssp             EEEEECSSSEEEEEEEE
T ss_pred             cEEecCCCeEEEEEEEe
Confidence            57999999999999874

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=91.16  E-value=0.072  Score=45.17  Aligned_cols=21  Identities=19%  Similarity=0.199  Sum_probs=17.4

Q ss_pred             hccc--cccccCCCceeEEEEec
Q 022858          243 DNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ++|.  .+||+||||.||+|+..
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~   46 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL   46 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET
T ss_pred             hhchhhheecccCceEEEEEEEC
Confidence            3455  79999999999999764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=90.91  E-value=0.07  Score=44.38  Aligned_cols=17  Identities=29%  Similarity=0.409  Sum_probs=15.3

Q ss_pred             cccccCCCceeEEEEec
Q 022858          247 HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~  263 (291)
                      .+||+||||.||+|+..
T Consensus        30 ~~lG~G~~g~Vy~~~~~   46 (289)
T 3og7_A           30 QRIGSGSFGTVYKGKWH   46 (289)
T ss_dssp             EEEEECSSEEEEEEESS
T ss_pred             eEecCCCCeEEEEEEEc
Confidence            79999999999999753

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=90.82  E-value=0.076  Score=45.09  Aligned_cols=21  Identities=43%  Similarity=0.605  Sum_probs=17.4

Q ss_pred             hccc--cccccCCCceeEEEEec
Q 022858          243 DNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ++|.  ..||+||||.||+|+.+
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~   35 (336)
T 3g2f_A           13 DNLKLLELIGRGRYGAVYKGSLD   35 (336)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEET
T ss_pred             HHhheeeecccCCCeEEEEEEEC
Confidence            4465  89999999999999753

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=90.81  E-value=0.066  Score=46.63  Aligned_cols=20  Identities=15%  Similarity=0.247  Sum_probs=16.4

Q ss_pred             ccc--cccccCCCceeEEEEec
Q 022858          244 NFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      +|.  ..||+||||.||+|+..
T Consensus        46 ~~~~~~~lG~G~fg~Vy~~~~~   67 (373)
T 2qol_A           46 NISIDKVVGAGEFGEVCSGRLK   67 (373)
T ss_dssp             GCCCCEEEEECSSSEEEEC-CB
T ss_pred             hceeeeEEeeCCCeEEEEEEEe
Confidence            455  78999999999999875

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=90.80  E-value=0.073  Score=50.18  Aligned_cols=23  Identities=22%  Similarity=0.557  Sum_probs=19.4

Q ss_pred             hhccc--cccccCCCceeEEEEecc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      .++|.  ..||+||||.||+++-..
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~  212 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKAD  212 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT
T ss_pred             hHHeEEEEEEecccCeEEEEEEECC
Confidence            35677  899999999999998754

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=90.65  E-value=0.031  Score=48.20  Aligned_cols=35  Identities=14%  Similarity=0.122  Sum_probs=28.5

Q ss_pred             cccCHHHHHHHhhccc--cccccCCCceeEEEEeccc
Q 022858          231 IRFTSQQLSIATDNFT--HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       231 ~~fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l~~~  265 (291)
                      ..|++++-....++|.  .+||+||||.||+++...-
T Consensus        23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~   59 (360)
T 3llt_A           23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDN   59 (360)
T ss_dssp             GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTT
T ss_pred             eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCC
Confidence            4577777777788888  8999999999999987543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=90.49  E-value=0.12  Score=44.45  Aligned_cols=26  Identities=23%  Similarity=0.294  Sum_probs=20.9

Q ss_pred             Hhhccc--cccccCCCceeEEEEecccc
Q 022858          241 ATDNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       241 aT~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      .++.|.  ..||+||||.||+|+...-+
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~   78 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQ   78 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCC
Confidence            355676  79999999999999876544

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=90.38  E-value=0.094  Score=44.24  Aligned_cols=21  Identities=10%  Similarity=0.153  Sum_probs=17.5

Q ss_pred             hhccc--cccccCCCceeEEEEe
Q 022858          242 TDNFT--HLLVSGGSGALYKLQR  262 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l  262 (291)
                      .++|.  .+||+||||.||+++.
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~   58 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEW   58 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE
T ss_pred             hhHceeeeEeecCCCeEEEEEEE
Confidence            44566  7899999999999975

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=90.31  E-value=0.069  Score=44.83  Aligned_cols=32  Identities=13%  Similarity=0.222  Sum_probs=25.5

Q ss_pred             ccCHHHHHHHhhccc--cccccCCCceeEEEEec
Q 022858          232 RFTSQQLSIATDNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       232 ~fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      .++..+.....++|.  ..||+||||.||++...
T Consensus        16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~   49 (316)
T 2xir_A           16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAF   49 (316)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEE
T ss_pred             cccccceecchhheeeeeEEcCCCceeEEEEEEe
Confidence            356666666677788  89999999999999864

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=90.07  E-value=0.073  Score=45.97  Aligned_cols=22  Identities=23%  Similarity=0.370  Sum_probs=18.1

Q ss_pred             Hhhccc--cccccCCCceeEEEEe
Q 022858          241 ATDNFT--HLLVSGGSGALYKLQR  262 (291)
Q Consensus       241 aT~nF~--~~lG~GGfG~VYkG~l  262 (291)
                      .+++|.  .+||+||||.||+|..
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~   86 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQ   86 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEe
Confidence            345566  7899999999999964

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=90.05  E-value=0.15  Score=42.12  Aligned_cols=27  Identities=22%  Similarity=0.298  Sum_probs=21.2

Q ss_pred             Hhhccc--cccccCCCceeEEEEeccccc
Q 022858          241 ATDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       241 aT~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ..++|.  .+||+||||.||+|+...-+.
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~   39 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSL   39 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTE
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCE
Confidence            345566  799999999999998865544

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=89.93  E-value=0.12  Score=44.80  Aligned_cols=21  Identities=24%  Similarity=0.219  Sum_probs=17.5

Q ss_pred             hccc--cccccCCCceeEEEEec
Q 022858          243 DNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ++|.  ..||+||||.||++...
T Consensus        81 ~~~~~~~~LG~G~fg~Vy~a~~~  103 (370)
T 2psq_A           81 DKLTLGKPLGEGCFGQVVMAEAV  103 (370)
T ss_dssp             GGEEEEEEESCCSSSEEEEEEEE
T ss_pred             HHCEeeeEEeeCCCeeEEEEEEe
Confidence            4555  78999999999999863

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=89.91  E-value=0.083  Score=43.87  Aligned_cols=18  Identities=17%  Similarity=0.014  Sum_probs=15.5

Q ss_pred             cccccCCCceeEEEEecc
Q 022858          247 HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~  264 (291)
                      .+||+||||.||+|....
T Consensus        32 ~~lg~G~~g~Vy~~~~~~   49 (290)
T 1t4h_A           32 IEIGRGSFKTVYKGLDTE   49 (290)
T ss_dssp             EEEEECSSEEEEEEEETT
T ss_pred             eeccCCCCeEEEEeEecC
Confidence            479999999999997654

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=89.67  E-value=0.12  Score=42.96  Aligned_cols=22  Identities=27%  Similarity=0.256  Sum_probs=18.0

Q ss_pred             cccccccCCCceeEEEEecccc
Q 022858          245 FTHLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       245 F~~~lG~GGfG~VYkG~l~~~~  266 (291)
                      +..+||+||||.||+++++...
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~   35 (295)
T 3ugc_A           14 FLQQLGKGNFGSVEMCRYDPLQ   35 (295)
T ss_dssp             EEEEEEECSSEEEEEEEECTTC
T ss_pred             hhheeeccCCEEEEEEEEeccc
Confidence            4578999999999999975443

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=89.62  E-value=0.16  Score=43.25  Aligned_cols=27  Identities=11%  Similarity=0.138  Sum_probs=21.7

Q ss_pred             HHHHHhhccc--cccccCCCceeEEEEec
Q 022858          237 QLSIATDNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       237 el~~aT~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ++....++|.  ..||+||||.||++...
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~   48 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRVAIEN   48 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEEEEET
T ss_pred             hhhhhhhheeecceeeecCCeEEEEEEEC
Confidence            3445567787  89999999999999754

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=89.59  E-value=0.12  Score=43.83  Aligned_cols=24  Identities=29%  Similarity=0.239  Sum_probs=19.0

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ++|.  .+||+||||.||+|+...-+
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~   40 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEG   40 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTT
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCC
Confidence            3455  79999999999999875444

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=89.54  E-value=0.12  Score=44.90  Aligned_cols=17  Identities=18%  Similarity=0.210  Sum_probs=15.5

Q ss_pred             cccccCCCceeEEEEec
Q 022858          247 HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~  263 (291)
                      +.||+||||.||+|...
T Consensus        95 ~~LG~G~fg~Vy~~~~~  111 (373)
T 3c1x_A           95 EVIGRGHFGCVYHGTLL  111 (373)
T ss_dssp             EEEECCSSSEEEEEEEE
T ss_pred             cEeeeCCCeEEEEEEEE
Confidence            78999999999999873

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=89.51  E-value=0.13  Score=45.94  Aligned_cols=22  Identities=14%  Similarity=0.288  Sum_probs=18.5

Q ss_pred             hhccc--cccccCCCceeEEEEec
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      .++|.  .+||+|+||.||+|..+
T Consensus       187 ~~~~~~~~~lG~G~fg~V~~~~~~  210 (454)
T 1qcf_A          187 RESLKLEKKLGAGQFGEVWMATYN  210 (454)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEET
T ss_pred             hHHeEEEEEcccCCceEEEEEEEC
Confidence            45566  89999999999999875

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=89.47  E-value=0.16  Score=42.37  Aligned_cols=24  Identities=13%  Similarity=0.136  Sum_probs=16.7

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ++|.  ..||+||||.||+++...-+
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~   38 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDN   38 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCC
Confidence            3455  89999999999999764433

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=89.46  E-value=0.17  Score=42.21  Aligned_cols=26  Identities=23%  Similarity=0.235  Sum_probs=20.1

Q ss_pred             cc--cccccCCCceeEEEEeccccccee
Q 022858          245 FT--HLLVSGGSGALYKLQRDFWQQNQC  270 (291)
Q Consensus       245 F~--~~lG~GGfG~VYkG~l~~~~~~~~  270 (291)
                      |.  .+||+||||.||+|....-++.-+
T Consensus        24 y~~~~~lg~G~~g~V~~~~~~~~~~~va   51 (303)
T 3a7i_A           24 FTKLEKIGKGSFGEVFKGIDNRTQKVVA   51 (303)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEE
T ss_pred             HHHhhhhcccCCeEEEEEEECCCCcEEE
Confidence            55  789999999999998765554433

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=89.44  E-value=0.2  Score=44.30  Aligned_cols=27  Identities=19%  Similarity=0.137  Sum_probs=21.1

Q ss_pred             Hhhccc--cccccCCCceeEEEEeccccc
Q 022858          241 ATDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       241 aT~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ..++|.  .+||+||||.||++....-+.
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~  161 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCK  161 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCC
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCc
Confidence            356676  889999999999998765443

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=89.42  E-value=0.13  Score=43.55  Aligned_cols=26  Identities=15%  Similarity=0.125  Sum_probs=20.8

Q ss_pred             hhccc--cccccCCCceeEEEEeccccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .++|.  ..||+||||.||+|.....++
T Consensus        45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~   72 (333)
T 2i1m_A           45 RNNLQFGKTLGAGAFGKVVEATAFGLGK   72 (333)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTCSS
T ss_pred             HHHceeeeEeccCCCcceEEEEecCCCc
Confidence            34566  899999999999999766554

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=89.39  E-value=0.039  Score=46.64  Aligned_cols=32  Identities=19%  Similarity=0.296  Sum_probs=23.6

Q ss_pred             cCHHHHHHHhhccc--cccccCCCceeEEEEecc
Q 022858          233 FTSQQLSIATDNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       233 fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      |..++...+.++|.  ..||+||||.||+|+...
T Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~   48 (322)
T 1p4o_A           15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKG   48 (322)
T ss_dssp             CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEE
T ss_pred             cChhhhcchhhheeeeeEeccCCceEEEeeeecC
Confidence            33344445566777  899999999999998654

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=89.32  E-value=0.18  Score=42.03  Aligned_cols=22  Identities=0%  Similarity=-0.141  Sum_probs=18.3

Q ss_pred             cccccCCCceeEEEEecccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQN  268 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~~  268 (291)
                      ..||+||||.||+|.....++.
T Consensus        37 ~~lg~G~~g~Vy~a~~~~~~~~   58 (286)
T 3uqc_A           37 IFHGGVPPLQFWQALDTALDRQ   58 (286)
T ss_dssp             EEEEBSTTCEEEEEEETTTTEE
T ss_pred             EEEcccCCeEEEEEEecCCCce
Confidence            7999999999999987655543

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=89.30  E-value=0.21  Score=41.27  Aligned_cols=24  Identities=17%  Similarity=0.088  Sum_probs=18.9

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ++|.  ..||+||||.||+|+...-+
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~   44 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDK   44 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTC
T ss_pred             ccceehhccccCCceeEEEEEEcCCc
Confidence            3455  78999999999999875433

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=89.29  E-value=0.14  Score=42.35  Aligned_cols=21  Identities=10%  Similarity=-0.056  Sum_probs=17.5

Q ss_pred             ccc--cccccCCCceeEEEEecc
Q 022858          244 NFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      .|.  ..||+||||.||+|....
T Consensus        16 ~y~~~~~lg~G~~g~Vy~~~~~~   38 (281)
T 1mp8_A           16 RIELGRCIGEGQFGDVHQGIYMS   38 (281)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECC
T ss_pred             HeEEEeEeeecCCeeEEEEEEec
Confidence            454  789999999999998744

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=89.25  E-value=0.15  Score=43.80  Aligned_cols=26  Identities=15%  Similarity=0.349  Sum_probs=20.0

Q ss_pred             HHHhhccc--cccccCCCceeEEEEecc
Q 022858          239 SIATDNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       239 ~~aT~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      ....++|.  ..||+||||.||+++...
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~   40 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKK   40 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETT
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECC
Confidence            34456777  899999999999998764

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=89.22  E-value=0.16  Score=44.46  Aligned_cols=18  Identities=28%  Similarity=0.337  Sum_probs=10.9

Q ss_pred             cccccCCCceeEEEEecc
Q 022858          247 HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~  264 (291)
                      .+||+|+||.||+++...
T Consensus        27 ~~lG~G~~g~Vy~~~~~~   44 (405)
T 3rgf_A           27 CKVGRGTYGHVYKAKRKD   44 (405)
T ss_dssp             CCCC-----EEEEEEESS
T ss_pred             cEeeecCCeEEEEEEEcc
Confidence            589999999999999753

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=89.09  E-value=0.15  Score=42.06  Aligned_cols=23  Identities=17%  Similarity=0.209  Sum_probs=18.9

Q ss_pred             hhccc--cccccCCCceeEEEEecc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      .++|.  ..||+||||.||+|+...
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~   35 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTN   35 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEC
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcC
Confidence            45566  899999999999998643

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=89.08  E-value=0.15  Score=42.02  Aligned_cols=21  Identities=19%  Similarity=0.153  Sum_probs=14.3

Q ss_pred             hccc--cccccCCCceeEEEEec
Q 022858          243 DNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ++|.  .+||+||||.||+|...
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~   46 (283)
T 3gen_A           24 KDLTFLKELGTGQFGVVKYGKWR   46 (283)
T ss_dssp             GGEEEEEECC---CEEEEEEEET
T ss_pred             HHHHhHhhcCCCCCceEEEEEEc
Confidence            3455  79999999999999765

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=89.03  E-value=0.15  Score=43.35  Aligned_cols=25  Identities=12%  Similarity=0.203  Sum_probs=20.4

Q ss_pred             HHhhccc--cccccCCCceeEEEEecc
Q 022858          240 IATDNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       240 ~aT~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      ...++|.  ..||+||||.||+|....
T Consensus        44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~   70 (343)
T 1luf_A           44 YPRNNIEYVRDIGEGAFGRVFQARAPG   70 (343)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEET
T ss_pred             ecHHHCeeeeeeeecCCeeEEEEEecC
Confidence            3456677  899999999999998753

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=88.84  E-value=0.11  Score=43.22  Aligned_cols=17  Identities=18%  Similarity=0.210  Sum_probs=15.4

Q ss_pred             cccccCCCceeEEEEec
Q 022858          247 HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~  263 (291)
                      .+||+||||.||+|...
T Consensus        31 ~~lg~G~~g~Vy~~~~~   47 (298)
T 3f66_A           31 EVIGRGHFGCVYHGTLL   47 (298)
T ss_dssp             EEEEEETTEEEEEEEEC
T ss_pred             ceeeecCCceEEEEEEe
Confidence            78999999999999863

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=88.75  E-value=0.14  Score=44.16  Aligned_cols=21  Identities=24%  Similarity=0.629  Sum_probs=18.1

Q ss_pred             hhccc--cccccCCCceeEEEEe
Q 022858          242 TDNFT--HLLVSGGSGALYKLQR  262 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l  262 (291)
                      .++|.  ..||+||||.||+++.
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~   75 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRK   75 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEE
T ss_pred             ccceEEEEEeccCCCEEEEEEEE
Confidence            35677  8999999999999986

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=88.72  E-value=0.25  Score=41.77  Aligned_cols=31  Identities=6%  Similarity=0.057  Sum_probs=22.9

Q ss_pred             cCHHHHHHHhhccc--cccccCCCceeEEEEec
Q 022858          233 FTSQQLSIATDNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       233 fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      +....-....++|.  .+||+||||.||+|+..
T Consensus        27 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~   59 (337)
T 3mdy_A           27 LPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR   59 (337)
T ss_dssp             SCHHHHTTHHHHCEEEEEEEEETTEEEEEEEET
T ss_pred             CCcccccccccceEEEeEeecCCCeEEEEEEEC
Confidence            33333344456777  89999999999999865

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=88.60  E-value=0.25  Score=41.68  Aligned_cols=24  Identities=33%  Similarity=0.381  Sum_probs=18.8

Q ss_pred             hhccc--cccccCCCceeEEEEeccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~  265 (291)
                      .++|.  ..||+||||.||+|+...-
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~   67 (320)
T 3a99_A           42 ESQYQVGPLLGSGGFGSVYSGIRVSD   67 (320)
T ss_dssp             TTTEEEEEECSSSSSCEEEEEEETTT
T ss_pred             cCceEEEEEEeeCCCeEEEEEEECCC
Confidence            34455  7999999999999986443

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=88.56  E-value=0.2  Score=41.49  Aligned_cols=21  Identities=24%  Similarity=0.219  Sum_probs=17.4

Q ss_pred             ccc--cccccCCCceeEEEEecc
Q 022858          244 NFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      .|.  .+||+||||.||++....
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~   45 (285)
T 3is5_A           23 LFIFKRKLGSGAFGDVHLVEERS   45 (285)
T ss_dssp             HEEEEEEEEECSSCEEEEEEETT
T ss_pred             heeecceeccCCCeEEEEEEEcc
Confidence            355  899999999999998654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=88.54  E-value=0.2  Score=42.25  Aligned_cols=24  Identities=13%  Similarity=0.160  Sum_probs=18.8

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ++|.  .+||+||||.||+++-..-+
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~   61 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNN   61 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTC
T ss_pred             CceEEEEEecccCCeEEEEEEECCCC
Confidence            4455  79999999999999864433

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=88.50  E-value=0.17  Score=43.89  Aligned_cols=21  Identities=10%  Similarity=0.199  Sum_probs=17.9

Q ss_pred             ccc--cccccCCCceeEEEEecc
Q 022858          244 NFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      +|.  .+||+|+||.||+|....
T Consensus       115 ~~~~~~~lG~G~~g~V~~~~~~~  137 (377)
T 3cbl_A          115 DLVLGEQIGRGNFGEVFSGRLRA  137 (377)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETT
T ss_pred             HeEEeeEeccCCCCeEEEEEEec
Confidence            455  899999999999999864

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=88.48  E-value=0.3  Score=42.22  Aligned_cols=34  Identities=6%  Similarity=-0.027  Sum_probs=25.2

Q ss_pred             CHHHHHHHhhccc--cccccCCCceeEEEEeccccc
Q 022858          234 TSQQLSIATDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       234 s~~el~~aT~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .+.......++|.  +.||+|+||.||+++...-++
T Consensus        85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~  120 (365)
T 2y7j_A           85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGH  120 (365)
T ss_dssp             HHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCC
T ss_pred             cchhhhhhhhhcccceEEecCCCEEEEEEEECCCCc
Confidence            3444455567777  899999999999998854443

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=88.38  E-value=0.22  Score=41.79  Aligned_cols=17  Identities=24%  Similarity=0.380  Sum_probs=15.4

Q ss_pred             cccccCCCceeEEEEec
Q 022858          247 HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~  263 (291)
                      ..||+||||.||+|...
T Consensus        39 ~~lg~G~~g~V~~~~~~   55 (319)
T 2y4i_B           39 ELIGKGRFGQVYHGRWH   55 (319)
T ss_dssp             CBCCCSSSSEEEEEEES
T ss_pred             eEeccCCceEEEEEEEc
Confidence            79999999999999763

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=88.33  E-value=0.21  Score=43.97  Aligned_cols=24  Identities=8%  Similarity=0.144  Sum_probs=19.8

Q ss_pred             hhccc--cccccCCCceeEEEEeccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~  265 (291)
                      .++|.  ..||+||||.||+++...-
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~   76 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKT   76 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTT
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCC
Confidence            45677  8999999999999987643

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=88.30  E-value=0.22  Score=45.04  Aligned_cols=23  Identities=26%  Similarity=0.372  Sum_probs=18.9

Q ss_pred             hccc--cccccCCCceeEEEEeccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~  265 (291)
                      ++|.  .+||+|+||.||+|+...-
T Consensus       220 ~~~~~~~~lG~G~fg~Vy~~~~~~~  244 (495)
T 1opk_A          220 TDITMKHKLGGGQYGEVYEGVWKKY  244 (495)
T ss_dssp             GGEEEEEESGGGTTSSEEEEEEGGG
T ss_pred             HHceeeeEecCCCCeEEEEEEEcCC
Confidence            4455  8999999999999988643

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=88.29  E-value=0.13  Score=42.77  Aligned_cols=17  Identities=18%  Similarity=0.257  Sum_probs=15.3

Q ss_pred             cccccCCCceeEEEEec
Q 022858          247 HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~  263 (291)
                      .+||+||||.||+|...
T Consensus        27 ~~lg~G~~g~Vy~~~~~   43 (298)
T 3pls_A           27 RVIGKGHFGVVYHGEYI   43 (298)
T ss_dssp             EEEEEETTEEEEEEEEE
T ss_pred             ceeccCCCceEEEEEEe
Confidence            68999999999999863

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=88.26  E-value=0.14  Score=42.05  Aligned_cols=21  Identities=14%  Similarity=0.216  Sum_probs=17.4

Q ss_pred             hccc--cccccCCCceeEEEEec
Q 022858          243 DNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ++|.  ..||+||||.||+|..+
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~   35 (279)
T 1qpc_A           13 ETLKLVERLGAGQFGEVWMGYYN   35 (279)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET
T ss_pred             HhhhheeeecCCCCeEEEEEEEc
Confidence            3455  79999999999999864

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=88.25  E-value=0.12  Score=43.59  Aligned_cols=26  Identities=23%  Similarity=0.274  Sum_probs=17.0

Q ss_pred             Hhhccc--cccccCCCceeEEEEecccc
Q 022858          241 ATDNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       241 aT~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ..++|.  ..||+||||.||+|....-+
T Consensus        21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~   48 (323)
T 3qup_A           21 PEQQFTLGRMLGKGEFGSVREAQLKQED   48 (323)
T ss_dssp             C---CEEEEEEEEETTEEEEEEEC----
T ss_pred             ChhHeEEeceecccCCeEEEEEEEcccC
Confidence            345566  89999999999999875543

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=88.22  E-value=0.16  Score=42.05  Aligned_cols=20  Identities=20%  Similarity=0.293  Sum_probs=13.1

Q ss_pred             ccc--cccccCCCceeEEEEec
Q 022858          244 NFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      +|.  ..||+||||.||+|+.+
T Consensus        19 ~y~~~~~lg~G~~g~Vy~~~~~   40 (291)
T 1u46_A           19 DLRLLEKLGDGSFGVVRRGEWD   40 (291)
T ss_dssp             GEEEEEECC----CCCEEEEEE
T ss_pred             HeeeeeeecCCCceeEEEEEec
Confidence            455  79999999999999864

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=88.12  E-value=0.17  Score=43.94  Aligned_cols=25  Identities=20%  Similarity=0.244  Sum_probs=20.2

Q ss_pred             HHhhccc--cccccCCCceeEEEEecc
Q 022858          240 IATDNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       240 ~aT~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      ..+++|.  .+||+||||.||+|....
T Consensus        51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~   77 (382)
T 2vx3_A           51 KWMDRYEIDSLIGKGSFGQVVKAYDRV   77 (382)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETT
T ss_pred             EeeeeEEEEEEEeecCCEEEEEEEEcC
Confidence            3456777  799999999999997643

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=88.11  E-value=0.25  Score=42.95  Aligned_cols=23  Identities=13%  Similarity=0.238  Sum_probs=18.9

Q ss_pred             hccc--cccccCCCceeEEEEeccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~  265 (291)
                      ++|.  ..||+|+||.||+++...-
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~   62 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAE   62 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTT
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCC
Confidence            4566  8999999999999987543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=88.03  E-value=0.24  Score=43.28  Aligned_cols=24  Identities=21%  Similarity=0.339  Sum_probs=19.3

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ++|.  ..||+||||.||+++...-+
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~   40 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTK   40 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTC
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCC
Confidence            4465  89999999999999876544

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=88.00  E-value=0.24  Score=42.44  Aligned_cols=24  Identities=25%  Similarity=0.443  Sum_probs=19.3

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ++|.  .+||+|+||.||++....-+
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~   58 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSG   58 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTC
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCC
Confidence            3455  78999999999999876444

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=87.99  E-value=0.19  Score=42.48  Aligned_cols=21  Identities=33%  Similarity=0.366  Sum_probs=14.9

Q ss_pred             hccc--cccccCCCceeEEEEec
Q 022858          243 DNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ++|.  ..||+||||.||+|+..
T Consensus        30 ~~y~~~~~lg~G~~g~Vy~~~~~   52 (327)
T 2yfx_A           30 KNITLIRGLGHGAFGEVYEGQVS   52 (327)
T ss_dssp             GGCEEEEECC--CSSCEEEEEC-
T ss_pred             hheEEEEEEcCCCCeeEEEEEEc
Confidence            3455  79999999999999854

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=87.97  E-value=0.29  Score=41.82  Aligned_cols=25  Identities=16%  Similarity=0.242  Sum_probs=19.6

Q ss_pred             hccc--cccccCCCceeEEEEeccccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ++|.  .+||+||||.||+++...-++
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~   43 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQ   43 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCC
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCC
Confidence            4566  899999999999998754433

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=87.94  E-value=0.19  Score=44.95  Aligned_cols=21  Identities=14%  Similarity=0.181  Sum_probs=17.7

Q ss_pred             hccc--cccccCCCceeEEEEec
Q 022858          243 DNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ++|.  .+||+|+||.||+|..+
T Consensus       184 ~~~~~~~~lG~G~fg~Vy~~~~~  206 (452)
T 1fmk_A          184 ESLRLEVKLGQGCFGEVWMGTWN  206 (452)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET
T ss_pred             hHceeeeeecCCCCeEEEEEEEC
Confidence            4455  78999999999999875

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=87.88  E-value=0.22  Score=42.09  Aligned_cols=19  Identities=21%  Similarity=0.149  Sum_probs=16.7

Q ss_pred             cccccCCCceeEEEEeccc
Q 022858          247 HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~  265 (291)
                      .+||+||||.||++..+..
T Consensus        47 ~~lg~G~~g~V~~~~~~~~   65 (326)
T 2w1i_A           47 QQLGKGNFGSVEMCRYDPL   65 (326)
T ss_dssp             EEEECCSSEEEEEEEECTT
T ss_pred             eeeccCCCeEEEEEEeccc
Confidence            7899999999999997543

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=87.87  E-value=0.22  Score=41.20  Aligned_cols=17  Identities=18%  Similarity=0.026  Sum_probs=14.9

Q ss_pred             cccccCCCceeEEEEec
Q 022858          247 HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~  263 (291)
                      ..||+||||.||+|+..
T Consensus        16 ~~lg~G~~g~Vy~~~~~   32 (287)
T 1u59_A           16 IELGCGNFGSVRQGVYR   32 (287)
T ss_dssp             EEEECCTTEEEEEEEEC
T ss_pred             ccccccCceeEEEeEec
Confidence            47999999999999863

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=87.85  E-value=0.16  Score=42.78  Aligned_cols=21  Identities=19%  Similarity=0.464  Sum_probs=17.2

Q ss_pred             hccc--cccccCCCceeEEEEec
Q 022858          243 DNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ++|.  .+||+|+||.||+++..
T Consensus        21 ~~y~~~~~lG~G~~g~V~~~~~~   43 (311)
T 3niz_A           21 EKYQKLEKVGEGTYGVVYKAKDS   43 (311)
T ss_dssp             CEEEEEEEEEECSSCEEEEEEET
T ss_pred             hhhHhhhhccCCCCeEEEEEEEC
Confidence            3455  79999999999999863

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=87.85  E-value=0.18  Score=43.45  Aligned_cols=25  Identities=24%  Similarity=0.246  Sum_probs=19.9

Q ss_pred             hhccc--cccccCCCceeEEEEecccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      .++|.  ..||+|+||.||+++...-+
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~   48 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETG   48 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTC
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCC
Confidence            45677  89999999999999876443

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=87.83  E-value=0.18  Score=42.25  Aligned_cols=25  Identities=24%  Similarity=0.332  Sum_probs=18.2

Q ss_pred             hhccc--cccccCCCceeEEEEecccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      .++|.  ..||+||||.||+|+...-+
T Consensus        30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~   56 (312)
T 2iwi_A           30 EAEYRLGPLLGKGGFGTVFAGHRLTDR   56 (312)
T ss_dssp             ---CEEEEEEEEETTEEEEEEECTTTC
T ss_pred             hhceEEeeEEEcCCCEEEEEEEEccCC
Confidence            45566  89999999999999765433

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=87.76  E-value=0.13  Score=43.76  Aligned_cols=20  Identities=10%  Similarity=0.255  Sum_probs=16.8

Q ss_pred             hccc--cccccCCCceeEEEEe
Q 022858          243 DNFT--HLLVSGGSGALYKLQR  262 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l  262 (291)
                      ++|.  .+||+|+||.||+++.
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~   41 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIA   41 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEE
T ss_pred             ccchheeeecccCceEEEEEEe
Confidence            3355  7999999999999975

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=87.75  E-value=0.22  Score=42.73  Aligned_cols=22  Identities=23%  Similarity=0.252  Sum_probs=18.0

Q ss_pred             hccc--cccccCCCceeEEEEecc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      +.|.  ..||+||||.||+|+-..
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~   77 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVR   77 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETT
T ss_pred             hheeeeeEEccCCCEEEEEEEEcc
Confidence            4466  789999999999998543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=87.71  E-value=0.18  Score=42.62  Aligned_cols=19  Identities=21%  Similarity=0.113  Sum_probs=16.7

Q ss_pred             cccccCCCceeEEEEeccc
Q 022858          247 HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~  265 (291)
                      .+||+|+||.||+++.+..
T Consensus        29 ~~lg~G~~g~V~~~~~~~~   47 (327)
T 3lxl_A           29 SQLGKGNFGSVELCRYDPL   47 (327)
T ss_dssp             EEEEEETTEEEEEEEECTT
T ss_pred             hhccCCCCeEEEEEEeccC
Confidence            7999999999999997543

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=87.71  E-value=0.18  Score=43.89  Aligned_cols=21  Identities=19%  Similarity=0.186  Sum_probs=17.4

Q ss_pred             hccc--cccccCCCceeEEEEec
Q 022858          243 DNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ++|.  .+||+||||.||+++..
T Consensus        69 ~~y~i~~~LG~G~~g~Vy~a~~~   91 (382)
T 3tt0_A           69 DRLVLGKPLGEGAFGQVVLAEAI   91 (382)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEE
T ss_pred             hheEeeeEEecCCCeEEEEEEEc
Confidence            3455  78999999999999863

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=87.70  E-value=0.21  Score=41.70  Aligned_cols=24  Identities=21%  Similarity=0.292  Sum_probs=18.5

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      +.|.  .+||+||||.||++.-..-+
T Consensus        20 ~~y~~~~~lg~G~~g~V~~~~~~~~~   45 (297)
T 3fxz_A           20 KKYTRFEKIGQGASGTVYTAMDVATG   45 (297)
T ss_dssp             GTBCCCEEEEEETTEEEEEEEBTTTC
T ss_pred             hceeeeeeeccCCCeEEEEEEECCCC
Confidence            3455  78999999999999854433

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=87.70  E-value=0.22  Score=42.22  Aligned_cols=21  Identities=19%  Similarity=-0.032  Sum_probs=17.5

Q ss_pred             cccccCCCceeEEEEeccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .+||+||||.||+++...-++
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~   37 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQ   37 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCC
T ss_pred             CccccCCCeEEEEEEECCCCC
Confidence            689999999999998765443

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=87.68  E-value=0.16  Score=44.11  Aligned_cols=25  Identities=8%  Similarity=-0.064  Sum_probs=19.3

Q ss_pred             hhccc--cccccCCCceeEEEEecccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      +++|.  ..||+||||.||+|....-+
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~   98 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETG   98 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCC
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCC
Confidence            45566  89999999999999975433

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=87.65  E-value=0.2  Score=42.57  Aligned_cols=21  Identities=24%  Similarity=0.259  Sum_probs=17.8

Q ss_pred             hccc--cccccCCCceeEEEEec
Q 022858          243 DNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ++|.  ..||+||||.||++...
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~   57 (334)
T 2pvf_A           35 DKLTLGKPLGEGAFGQVVMAEAV   57 (334)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET
T ss_pred             hHeEEeeEEeecCceeEEEeEec
Confidence            4555  89999999999999864

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=87.57  E-value=0.18  Score=42.85  Aligned_cols=21  Identities=24%  Similarity=0.392  Sum_probs=17.9

Q ss_pred             hhccc--cccccCCCceeEEEEe
Q 022858          242 TDNFT--HLLVSGGSGALYKLQR  262 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l  262 (291)
                      .++|.  ..||+||||.||+|..
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~   66 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATA   66 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE
T ss_pred             HHHceeeeeecCCCCceeEEeee
Confidence            35566  8999999999999986

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=87.55  E-value=0.23  Score=41.95  Aligned_cols=21  Identities=19%  Similarity=0.139  Sum_probs=17.4

Q ss_pred             cccccCCCceeEEEEeccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ..||+||||.||++....-++
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~   48 (327)
T 3aln_A           28 GEIGRGAYGSVNKMVHKPSGQ   48 (327)
T ss_dssp             CEEEECSSEEEEEEEETTTTE
T ss_pred             heeccCCCEEEEEEEEcCCCC
Confidence            789999999999998765433

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=87.50  E-value=0.24  Score=41.72  Aligned_cols=28  Identities=18%  Similarity=0.054  Sum_probs=21.4

Q ss_pred             hccc--cccccCCCceeEEEEeccccccee
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQNQC  270 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~~~~  270 (291)
                      +.|.  ..||+|+||.||++....-+..-+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va   41 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYA   41 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEE
Confidence            4455  899999999999998766554433

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=87.41  E-value=0.24  Score=42.43  Aligned_cols=25  Identities=12%  Similarity=0.066  Sum_probs=19.9

Q ss_pred             hhccc--cccccCCCceeEEEEecccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      .++|.  ..||+|+||.||+++-..-+
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~   47 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATN   47 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTT
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCC
Confidence            45566  89999999999999876533

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=87.41  E-value=0.2  Score=44.77  Aligned_cols=21  Identities=10%  Similarity=0.101  Sum_probs=17.5

Q ss_pred             hccc--cccccCCCceeEEEEec
Q 022858          243 DNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ++|.  .+||+|+||.||+|..+
T Consensus       193 ~~~~~~~~lG~G~fg~V~~~~~~  215 (450)
T 1k9a_A          193 KELKLLQTIGKGEFGDVMLGDYR  215 (450)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET
T ss_pred             HHeEEEeeecCcCCeeEEEEEec
Confidence            3455  89999999999999864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=87.35  E-value=0.16  Score=43.78  Aligned_cols=23  Identities=22%  Similarity=0.280  Sum_probs=19.2

Q ss_pred             hhccc--cccccCCCceeEEEEecc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      .++|.  ..||+||||.||+++...
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~   43 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKG   43 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETT
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECC
Confidence            35677  899999999999998764

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=87.35  E-value=0.19  Score=42.04  Aligned_cols=16  Identities=19%  Similarity=0.246  Sum_probs=15.1

Q ss_pred             cccccCCCceeEEEEe
Q 022858          247 HLLVSGGSGALYKLQR  262 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l  262 (291)
                      ..||+||||.||+|..
T Consensus        29 ~~lg~G~~g~V~~~~~   44 (313)
T 1t46_A           29 KTLGAGAFGKVVEATA   44 (313)
T ss_dssp             EEEEECSSEEEEEEEE
T ss_pred             HhhCccCCcceEEEEE
Confidence            7999999999999985

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=87.32  E-value=0.16  Score=41.33  Aligned_cols=19  Identities=32%  Similarity=0.366  Sum_probs=16.1

Q ss_pred             cccccccCCCceeEEEEec
Q 022858          245 FTHLLVSGGSGALYKLQRD  263 (291)
Q Consensus       245 F~~~lG~GGfG~VYkG~l~  263 (291)
                      +..+||+||||.||+|+.+
T Consensus        14 ~~~~lg~G~~g~V~~~~~~   32 (271)
T 3kmu_A           14 FLTKLNENHSGELWKGRWQ   32 (271)
T ss_dssp             EEEEEEEETTEEEEEEEET
T ss_pred             HHHHhcCCCcceEEEEEEC
Confidence            4568999999999999753

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=87.31  E-value=0.27  Score=40.54  Aligned_cols=24  Identities=25%  Similarity=0.363  Sum_probs=19.2

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ++|.  ..||+|+||.||++....-+
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~   39 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNK   39 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTT
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCC
Confidence            3466  79999999999999875443

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=87.23  E-value=0.18  Score=44.11  Aligned_cols=20  Identities=20%  Similarity=0.526  Sum_probs=17.0

Q ss_pred             ccc--cccccCCCceeEEEEec
Q 022858          244 NFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      +|.  ..||+||||.||++...
T Consensus        57 ~y~~~~~LG~G~fg~Vy~~~~~   78 (390)
T 2zmd_A           57 IYSILKQIGSGGSSKVFQVLNE   78 (390)
T ss_dssp             EEEEEEEEECCSSEEEEEEECT
T ss_pred             ceEEEEEEccCCCeEEEEEEcC
Confidence            355  79999999999999764

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=87.22  E-value=0.22  Score=41.72  Aligned_cols=24  Identities=13%  Similarity=0.140  Sum_probs=18.0

Q ss_pred             Hhhccc--cccccCCCceeEEEEecc
Q 022858          241 ATDNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       241 aT~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      ..++|.  ..||+||||.||+|....
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~   57 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQ   57 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEEC
T ss_pred             CHHHeeeccceeecCCeEEEEEEEec
Confidence            345555  789999999999997754

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=87.17  E-value=0.29  Score=40.88  Aligned_cols=24  Identities=17%  Similarity=0.166  Sum_probs=17.0

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ++|.  ..||+||||.||+|....-+
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~   57 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDG   57 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTC
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCC
Confidence            3455  79999999999999865433

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=87.17  E-value=0.24  Score=41.16  Aligned_cols=17  Identities=24%  Similarity=0.120  Sum_probs=15.6

Q ss_pred             cccccCCCceeEEEEec
Q 022858          247 HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~  263 (291)
                      .+||+||||.||+++++
T Consensus        27 ~~lg~G~~g~V~~~~~~   43 (302)
T 4e5w_A           27 RDLGEGHFGKVELCRYD   43 (302)
T ss_dssp             EEEEECSSEEEEEEEEC
T ss_pred             hccCCCCceEEEEEEEc
Confidence            78999999999999964

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=87.15  E-value=0.29  Score=40.92  Aligned_cols=26  Identities=27%  Similarity=0.316  Sum_probs=15.4

Q ss_pred             hhccc--cccccCCCceeEEEEeccccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .+.|.  ..||+|+||.||+|....-++
T Consensus        28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~   55 (314)
T 3com_A           28 EEVFDVLEKLGEGSYGSVYKAIHKETGQ   55 (314)
T ss_dssp             --CEEEEEECC----CEEEEEEETTTCC
T ss_pred             hhhhhhheeeccCCCeEEEEEEECCCCC
Confidence            34465  799999999999998765444

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=87.10  E-value=0.19  Score=42.95  Aligned_cols=22  Identities=23%  Similarity=0.353  Sum_probs=12.3

Q ss_pred             hccc--cccccCCCceeEEEEecc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      ++|.  ..||+||||.||+|....
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~   60 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTN   60 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESS
T ss_pred             ceEEEEeeEeecCCeEEEEEEecC
Confidence            3455  799999999999998864

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=87.04  E-value=0.31  Score=41.28  Aligned_cols=21  Identities=19%  Similarity=0.167  Sum_probs=17.4

Q ss_pred             cccccCCCceeEEEEeccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ..||+||||.||+++...-+.
T Consensus        31 ~~lg~G~~g~V~~~~~~~~~~   51 (331)
T 4aaa_A           31 GLVGEGSYGMVMKCRNKDTGR   51 (331)
T ss_dssp             EEGGGGTTSSEEEEEETTTCC
T ss_pred             eEEeecCCEEEEEEEECCCCc
Confidence            799999999999998754433

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=87.00  E-value=0.26  Score=43.73  Aligned_cols=20  Identities=15%  Similarity=0.152  Sum_probs=16.9

Q ss_pred             cccccCCCceeEEEEecccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~  266 (291)
                      .+||+||||.||++.-..-+
T Consensus       103 ~~LG~G~fg~V~~a~~~~~~  122 (429)
T 3kvw_A          103 KVIGKGSFGQVVKAYDHKVH  122 (429)
T ss_dssp             EEEEESSSEEEEEEEETTTT
T ss_pred             EEcccCccEEEEEEEECCCC
Confidence            79999999999999765443

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=86.94  E-value=0.27  Score=40.75  Aligned_cols=29  Identities=17%  Similarity=0.192  Sum_probs=22.3

Q ss_pred             hccc--cccccCCCceeEEEEecccccceee
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQNQCV  271 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~~~~~  271 (291)
                      ++|.  ..||+|+||.||++....-++.-++
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vav   47 (298)
T 1phk_A           17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAV   47 (298)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEE
T ss_pred             hccceeeeecCCCceEEEEEEEcCcCceEEE
Confidence            4565  7899999999999998765554443

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=86.86  E-value=0.27  Score=42.07  Aligned_cols=26  Identities=12%  Similarity=0.143  Sum_probs=19.7

Q ss_pred             hccc--cccccCCCceeEEEEecccccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQN  268 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~~  268 (291)
                      ++|.  ..||+||||.||+|+-..-++.
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~   51 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEK   51 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEE
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCE
Confidence            3455  7899999999999987554443

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=86.81  E-value=0.3  Score=40.87  Aligned_cols=26  Identities=15%  Similarity=0.239  Sum_probs=14.3

Q ss_pred             hhccc--cccccCCCceeEEEEeccccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .++|.  ..||+|+||.||++....-+.
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~   51 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGH   51 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCC
T ss_pred             hccccccceeeecCCeeEEEEEEecCCe
Confidence            34566  789999999999998765443

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=86.77  E-value=0.32  Score=41.84  Aligned_cols=25  Identities=20%  Similarity=0.275  Sum_probs=20.0

Q ss_pred             hccc--cccccCCCceeEEEEeccccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ++|.  ..||+|+||.||+++...-++
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~   67 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGN   67 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCC
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCC
Confidence            4566  899999999999998765443

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=86.76  E-value=0.3  Score=40.83  Aligned_cols=23  Identities=17%  Similarity=0.099  Sum_probs=18.2

Q ss_pred             cccccccCCCceeEEEEeccccc
Q 022858          245 FTHLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       245 F~~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      +.++||+||||.||++....-+.
T Consensus        14 ~~~~lG~G~~g~V~~~~~~~~~~   36 (310)
T 3s95_A           14 HGEVLGKGCFGQAIKVTHRETGE   36 (310)
T ss_dssp             EEEEEECCSSEEEEEEEETTTCC
T ss_pred             ccceecCCCCEEEEEEEECCCCc
Confidence            45789999999999998754443

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=86.73  E-value=0.27  Score=43.39  Aligned_cols=20  Identities=15%  Similarity=0.183  Sum_probs=17.2

Q ss_pred             cccccCCCceeEEEEecccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ..||+|+||.||+|+...-+
T Consensus        60 ~~lG~G~fg~Vy~~~~~~~~   79 (420)
T 1j1b_A           60 KVIGNGSFGVVYQAKLCDSG   79 (420)
T ss_dssp             EEEEECSSEEEEEEEETTTC
T ss_pred             eEEeeCCCEEEEEEEECCCC
Confidence            78999999999999986433

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=86.73  E-value=0.21  Score=42.23  Aligned_cols=23  Identities=13%  Similarity=0.143  Sum_probs=18.4

Q ss_pred             ccc--cccccCCCceeEEEEecccc
Q 022858          244 NFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      +|.  ..||+||||.||++....-+
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~   50 (327)
T 1fvr_A           26 DIKFQDVIGEGNFGQVLKARIKKDG   50 (327)
T ss_dssp             GCEEEEEEECGGGCEEEEEEEEETT
T ss_pred             HccceeeeecCCCceEEEEEEccCC
Confidence            455  79999999999999875443

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=86.72  E-value=0.27  Score=42.44  Aligned_cols=27  Identities=15%  Similarity=0.107  Sum_probs=20.9

Q ss_pred             Hhhccc--cccccCCCceeEEEEeccccc
Q 022858          241 ATDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       241 aT~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ..++|.  ..||+|+||.||++....-+.
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~   55 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHKTTGL   55 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCC
T ss_pred             cccCeEEeeEEecCCCeEEEEEEECCCCC
Confidence            346677  899999999999998754433

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=86.71  E-value=0.25  Score=40.56  Aligned_cols=21  Identities=10%  Similarity=0.101  Sum_probs=17.4

Q ss_pred             hccc--cccccCCCceeEEEEec
Q 022858          243 DNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ++|.  ..||+||||.||+|..+
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~   43 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDYR   43 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET
T ss_pred             hhceEEeEEecCCCceEEEEEEc
Confidence            3455  89999999999999764

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=86.69  E-value=0.34  Score=40.20  Aligned_cols=24  Identities=21%  Similarity=0.238  Sum_probs=18.8

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      +.|.  ..||+||||.||+|....-+
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~   44 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETG   44 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTC
T ss_pred             cceeecceeccCCCeEEEEEEEcCCC
Confidence            3455  78999999999999876433

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=86.65  E-value=0.27  Score=41.91  Aligned_cols=26  Identities=23%  Similarity=0.267  Sum_probs=19.4

Q ss_pred             hhccc---cccccCCCceeEEEEeccccc
Q 022858          242 TDNFT---HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       242 T~nF~---~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      +++|.   ..||+||||.||++....-++
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~   55 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQ   55 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCC
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCC
Confidence            44565   359999999999998764443

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=86.63  E-value=0.23  Score=41.47  Aligned_cols=23  Identities=22%  Similarity=0.190  Sum_probs=18.3

Q ss_pred             hhccc--cccccCCCceeEEEEecc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      .++|.  ..||+||||.||++....
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~   46 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFH   46 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEET
T ss_pred             hhheeeeeeecccCCeeEEEEEEec
Confidence            34455  789999999999998643

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=86.61  E-value=0.27  Score=43.04  Aligned_cols=26  Identities=19%  Similarity=0.167  Sum_probs=20.3

Q ss_pred             hhccc--cccccCCCceeEEEEeccccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .++|.  ..||+|+||.||++....-++
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~   77 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGR   77 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCC
Confidence            34566  889999999999998765443

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=86.56  E-value=0.19  Score=42.71  Aligned_cols=21  Identities=24%  Similarity=0.635  Sum_probs=17.6

Q ss_pred             hccc--cccccCCCceeEEEEec
Q 022858          243 DNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ++|.  ..||+||||.||+++..
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~   39 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKV   39 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEC
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEe
Confidence            4566  89999999999999863

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=86.55  E-value=0.19  Score=46.58  Aligned_cols=24  Identities=17%  Similarity=0.268  Sum_probs=19.1

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ++|.  ..||+|+||.||+++-..=+
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg  182 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATG  182 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCC
Confidence            4566  89999999999999865433

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=86.54  E-value=0.29  Score=41.03  Aligned_cols=26  Identities=15%  Similarity=0.173  Sum_probs=19.6

Q ss_pred             hccc--cccccCCCceeEEEEecccccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQN  268 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~~  268 (291)
                      +.|.  ..||+||||.||+++-..-++.
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~   39 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLRDHRD   39 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEE
T ss_pred             CcEEEEEEEccCCCEEEEEEEECCCCce
Confidence            3455  7999999999999986544433

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=86.48  E-value=0.27  Score=42.50  Aligned_cols=26  Identities=19%  Similarity=0.060  Sum_probs=20.1

Q ss_pred             hhccc--cccccCCCceeEEEEeccccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .+.|.  ..||+|+||.||+++...-+.
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~   38 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGL   38 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCC
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCC
Confidence            34455  899999999999998765443

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=86.46  E-value=0.24  Score=42.75  Aligned_cols=25  Identities=8%  Similarity=0.088  Sum_probs=19.2

Q ss_pred             hhccc--cccccCCCceeEEEEecccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ..+|.  .+||+||||.||+|+...-+
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~   87 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERL   87 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTT
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCC
Confidence            33455  89999999999999865433

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=86.32  E-value=0.3  Score=42.24  Aligned_cols=25  Identities=12%  Similarity=0.138  Sum_probs=19.2

Q ss_pred             hccc--cccccCCCceeEEEEeccccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ++|.  ..||+||||.||+++-..-++
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~   68 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGE   68 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTE
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCC
Confidence            3444  789999999999998655444

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=86.27  E-value=0.3  Score=42.27  Aligned_cols=24  Identities=8%  Similarity=-0.076  Sum_probs=18.8

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      +.|.  .+||+||||.||+++-..-+
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~   62 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGK   62 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTT
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCC
Confidence            4455  78999999999999765433

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=86.24  E-value=0.29  Score=45.63  Aligned_cols=19  Identities=16%  Similarity=0.088  Sum_probs=15.9

Q ss_pred             ccccCCCceeEEEEecccc
Q 022858          248 LLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       248 ~lG~GGfG~VYkG~l~~~~  266 (291)
                      +||+|+||.||+|....-.
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~  361 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRK  361 (613)
T ss_dssp             EEEECSSSEEEEEEEECSS
T ss_pred             EEecCCCcEEEEEEEecCC
Confidence            7999999999999875433

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=86.16  E-value=0.35  Score=40.93  Aligned_cols=25  Identities=24%  Similarity=0.375  Sum_probs=19.3

Q ss_pred             HHhhccc--cccccCCCceeEEEEecc
Q 022858          240 IATDNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       240 ~aT~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      ...++|.  .+||+|+||.||+++-..
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~   57 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTV   57 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETT
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECC
Confidence            3345676  899999999999997543

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=85.93  E-value=0.26  Score=45.10  Aligned_cols=22  Identities=14%  Similarity=0.095  Sum_probs=17.8

Q ss_pred             hccc--cccccCCCceeEEEEecc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      ++|.  .+||+|+||.||+|..+.
T Consensus       267 ~~~~~~~~lG~G~fg~Vy~~~~~~  290 (535)
T 2h8h_A          267 ESLRLEVKLGQGCFGEVWMGTWNG  290 (535)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT
T ss_pred             hhhhhheecccCCCeEEEEEEECC
Confidence            3444  789999999999998753

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=85.91  E-value=0.31  Score=43.37  Aligned_cols=24  Identities=21%  Similarity=0.295  Sum_probs=19.2

Q ss_pred             hhccc--cccccCCCceeEEEEeccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~  265 (291)
                      .++|.  .+||+||||.||++.-..-
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~  172 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKAT  172 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTT
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCC
Confidence            35566  8999999999999986543

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=85.77  E-value=0.27  Score=40.71  Aligned_cols=22  Identities=14%  Similarity=0.215  Sum_probs=18.1

Q ss_pred             cccccCCCceeEEEEecccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQN  268 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~~  268 (291)
                      ..||+||||.||++....-++.
T Consensus        21 ~~lg~G~~g~Vy~~~~~~~~~~   42 (294)
T 2rku_A           21 RFLGKGGFAKCFEISDADTKEV   42 (294)
T ss_dssp             EEEEEETTEEEEEEEETTTCCE
T ss_pred             EEEeecCCEEEEEEEECCCCce
Confidence            7899999999999987654443

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=85.71  E-value=0.35  Score=43.77  Aligned_cols=26  Identities=15%  Similarity=0.175  Sum_probs=18.3

Q ss_pred             hhccc--cccccCCCceeEEEEeccccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .+.|.  .+||+||||.||+++...-+.
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~   62 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHS   62 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCC
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCc
Confidence            34555  899999999999998765444

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=85.59  E-value=0.34  Score=41.87  Aligned_cols=25  Identities=12%  Similarity=0.267  Sum_probs=19.4

Q ss_pred             hccc--cccccCCCceeEEEEeccccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ++|.  ..||+||||.||++.-..-+.
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~   51 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILER   51 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTE
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCc
Confidence            4455  789999999999998655443

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=85.56  E-value=0.33  Score=40.17  Aligned_cols=15  Identities=33%  Similarity=0.146  Sum_probs=13.9

Q ss_pred             ccccCCCceeEEEEe
Q 022858          248 LLVSGGSGALYKLQR  262 (291)
Q Consensus       248 ~lG~GGfG~VYkG~l  262 (291)
                      .||+||||.||+|..
T Consensus        24 ~lg~G~~g~Vy~~~~   38 (291)
T 1xbb_A           24 ELGSGNFGTVKKGYY   38 (291)
T ss_dssp             EEEECSSEEEEEEEE
T ss_pred             ccccccCeeeEeeee
Confidence            899999999999965

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=85.34  E-value=0.3  Score=39.89  Aligned_cols=18  Identities=22%  Similarity=0.097  Sum_probs=15.6

Q ss_pred             cccccccCCCceeEEEEe
Q 022858          245 FTHLLVSGGSGALYKLQR  262 (291)
Q Consensus       245 F~~~lG~GGfG~VYkG~l  262 (291)
                      +...||+||||.||+|..
T Consensus        14 ~~~~lg~G~~g~V~~~~~   31 (269)
T 4hcu_A           14 FVQEIGSGQFGLVHLGYW   31 (269)
T ss_dssp             EEEEEEECSSCEEEEEEE
T ss_pred             eeheecCCCccEEEEEEe
Confidence            446899999999999976

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=85.25  E-value=0.44  Score=41.10  Aligned_cols=20  Identities=15%  Similarity=0.145  Sum_probs=17.0

Q ss_pred             cccccCCCceeEEEEecccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~  266 (291)
                      .+||+||||.||+++-..-+
T Consensus        26 ~~lG~G~~g~V~~~~~~~~~   45 (361)
T 3uc3_A           26 KDIGSGNFGVARLMRDKLTK   45 (361)
T ss_dssp             EEESSSTTSSEEEEEETTTC
T ss_pred             EEeccCCCEEEEEEEECCCC
Confidence            79999999999999875443

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=85.22  E-value=0.34  Score=45.73  Aligned_cols=23  Identities=22%  Similarity=0.280  Sum_probs=19.3

Q ss_pred             hhccc--cccccCCCceeEEEEecc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      .++|.  ..||+||||.||+++...
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~  364 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKG  364 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESS
T ss_pred             ccceEEEEEEccCCCEEEEEEEECC
Confidence            45676  899999999999998764

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=85.19  E-value=0.36  Score=40.63  Aligned_cols=26  Identities=15%  Similarity=0.068  Sum_probs=19.8

Q ss_pred             cccccccCCCceeEEEEeccccccee
Q 022858          245 FTHLLVSGGSGALYKLQRDFWQQNQC  270 (291)
Q Consensus       245 F~~~lG~GGfG~VYkG~l~~~~~~~~  270 (291)
                      +...||+||||.||++....-+..-+
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~~~va   39 (322)
T 2ycf_A           14 MSKTLGSGACGEVKLAFERKTCKKVA   39 (322)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEE
T ss_pred             EeeEEecCCCEEEEEEEEcCCCcEEE
Confidence            44689999999999998765544433

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=85.15  E-value=0.38  Score=40.90  Aligned_cols=26  Identities=8%  Similarity=0.068  Sum_probs=20.2

Q ss_pred             hhccc--cccccCCCceeEEEEeccccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .++|.  ..||+||||.||+++-..-++
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~   41 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGR   41 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCC
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCC
Confidence            45566  899999999999998654443

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=85.06  E-value=0.35  Score=40.70  Aligned_cols=18  Identities=22%  Similarity=0.014  Sum_probs=15.7

Q ss_pred             cccccCCCceeEEEEecc
Q 022858          247 HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~  264 (291)
                      .+||+||||.||++.++.
T Consensus        37 ~~lG~G~~g~V~~~~~~~   54 (318)
T 3lxp_A           37 RDLGEGHFGKVSLYCYDP   54 (318)
T ss_dssp             EEEEECSSEEEEEEEECS
T ss_pred             heecCCCCeEEEEEEEcc
Confidence            789999999999997643

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=85.05  E-value=0.24  Score=42.41  Aligned_cols=22  Identities=14%  Similarity=0.282  Sum_probs=18.6

Q ss_pred             hccc--cccccCCCceeEEEEecc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      ++|.  ..||+||||.||+|+...
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~   65 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTS   65 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC
T ss_pred             CeEEEEEEecCCCCeEEEEEeecC
Confidence            4555  899999999999998864

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=85.02  E-value=0.31  Score=41.31  Aligned_cols=24  Identities=8%  Similarity=0.162  Sum_probs=19.5

Q ss_pred             HHhhccc--cccccCCCceeEEEEec
Q 022858          240 IATDNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       240 ~aT~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ...++|.  ..||+|+||.||+|+.+
T Consensus        39 ~~~~~y~~~~~lg~G~~g~Vy~~~~~   64 (342)
T 1b6c_B           39 TIARTIVLQESIGKGRFGEVWRGKWR   64 (342)
T ss_dssp             HHHHHCEEEEEEEEETTEEEEEEEET
T ss_pred             cccccEEEEeeecCCCCcEEEEEEEc
Confidence            3445666  89999999999999864

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=85.00  E-value=0.4  Score=41.46  Aligned_cols=25  Identities=12%  Similarity=0.090  Sum_probs=15.1

Q ss_pred             hccc--cccccCCCceeEEEEeccccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      +.|.  ..||+|+||.||+|.-..-++
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~   55 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGL   55 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTE
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCC
Confidence            4455  789999999999997554443

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=84.92  E-value=0.43  Score=43.82  Aligned_cols=26  Identities=27%  Similarity=0.358  Sum_probs=20.4

Q ss_pred             hhccc--cccccCCCceeEEEEeccccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .++|.  ..||+||||.||+++...-++
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~  211 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGK  211 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCC
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCc
Confidence            35566  789999999999998765443

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=84.88  E-value=0.43  Score=39.40  Aligned_cols=18  Identities=22%  Similarity=0.172  Sum_probs=15.6

Q ss_pred             cccccCCCceeEEEEecc
Q 022858          247 HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~  264 (291)
                      ..||+||||.||+|.-..
T Consensus        28 ~~lg~G~~g~Vy~~~~~~   45 (295)
T 2clq_A           28 VVLGKGTYGIVYAGRDLS   45 (295)
T ss_dssp             CEEEECSSSEEEEEEETT
T ss_pred             EEEeecCcEEEEEEEECC
Confidence            489999999999998643

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=84.82  E-value=0.37  Score=44.62  Aligned_cols=25  Identities=24%  Similarity=0.306  Sum_probs=20.5

Q ss_pred             hhccc--cccccCCCceeEEEEecccc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      .++|.  ..||+||||.||+++...-+
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg  209 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATG  209 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTC
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCC
Confidence            45677  79999999999999876543

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=84.80  E-value=0.29  Score=41.05  Aligned_cols=31  Identities=19%  Similarity=0.410  Sum_probs=22.3

Q ss_pred             cCHHHHHHHhhccc--cccccCCCceeEEEEec
Q 022858          233 FTSQQLSIATDNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       233 fs~~el~~aT~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      |.++.+....+.|.  ..||+||||.||++...
T Consensus        18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~   50 (313)
T 3cek_A           18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE   50 (313)
T ss_dssp             --CCEEEETTEEEEEEEEEECCSSEEEEEEECT
T ss_pred             CCeeeeeeccceEEEEEEecCCCCEEEEEEEcC
Confidence            44445555556677  79999999999999763

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=84.79  E-value=0.39  Score=42.82  Aligned_cols=25  Identities=20%  Similarity=0.433  Sum_probs=11.9

Q ss_pred             hccc--cccccCCCceeEEEEeccccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      +.|.  ..||+|+||.||+++-..-+.
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~   79 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKR   79 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--C
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCc
Confidence            4566  899999999999998655443

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=84.79  E-value=0.34  Score=40.03  Aligned_cols=26  Identities=23%  Similarity=0.385  Sum_probs=20.1

Q ss_pred             hccc--cccccCCCceeEEEEecccccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQN  268 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~~  268 (291)
                      +.|.  .+||+||||.||+++...-++.
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~   49 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQE   49 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCE
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcE
Confidence            3455  8999999999999987654443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=84.67  E-value=0.39  Score=41.15  Aligned_cols=24  Identities=8%  Similarity=0.015  Sum_probs=18.7

Q ss_pred             ccc--cccccCCCceeEEEEeccccc
Q 022858          244 NFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .|.  ..||+|+||.||++.-..-++
T Consensus        25 ~y~~~~~lG~G~~g~V~~~~~~~~~~   50 (351)
T 3c0i_A           25 VYELCEVIGKGPFSVVRRCINRETGQ   50 (351)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCC
T ss_pred             ceEEeeEEeeCCCEEEEEEEECCCCC
Confidence            355  899999999999997654433

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=84.65  E-value=0.41  Score=41.50  Aligned_cols=21  Identities=19%  Similarity=0.137  Sum_probs=12.1

Q ss_pred             cccccCCCceeEEEEeccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      +.||+|+||.||+|....-+.
T Consensus        95 ~~lG~G~~g~Vy~a~~~~~g~  115 (373)
T 2x4f_A           95 EILGGGRFGQVHKCEETATGL  115 (373)
T ss_dssp             EECC-----CEEEEEETTTCC
T ss_pred             eEEecCcCEEEEEEEEcCCCc
Confidence            579999999999998755443

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=84.63  E-value=0.4  Score=41.26  Aligned_cols=23  Identities=13%  Similarity=0.278  Sum_probs=18.3

Q ss_pred             hhccc--cccccCCCceeEEEEecc
Q 022858          242 TDNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       242 T~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      .+.|.  ..||+||||.||++.-..
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~   50 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNL   50 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETT
T ss_pred             cccEEEEEEeecCCCeEEEEEEECC
Confidence            34566  799999999999997543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=84.51  E-value=0.42  Score=40.62  Aligned_cols=20  Identities=10%  Similarity=0.272  Sum_probs=17.3

Q ss_pred             hccc--cccccCCCceeEEEEe
Q 022858          243 DNFT--HLLVSGGSGALYKLQR  262 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l  262 (291)
                      ++|.  ..||+|+||.||++..
T Consensus        31 ~~y~~~~~lg~G~~g~V~~~~~   52 (348)
T 2pml_X           31 NDYRIIRTLNQGKFNKIILCEK   52 (348)
T ss_dssp             TTEEEEEEEECCSSCCEEEEEE
T ss_pred             CceEEEEEEcCCCCeEEEEEEc
Confidence            4565  7999999999999987

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=84.51  E-value=0.43  Score=40.17  Aligned_cols=22  Identities=23%  Similarity=0.274  Sum_probs=18.1

Q ss_pred             ccc--cccccCCCceeEEEEeccc
Q 022858          244 NFT--HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~~  265 (291)
                      +|.  .+||+||||.||+++...-
T Consensus        29 ~y~~~~~lg~G~~g~V~~~~~~~~   52 (337)
T 3ll6_A           29 RLRVRRVLAEGGFAFVYEAQDVGS   52 (337)
T ss_dssp             EEEEEEEEECCSSEEEEEEEETTT
T ss_pred             eEEEEEEEccCCceEEEEEEECCC
Confidence            455  7999999999999986543

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=84.49  E-value=0.39  Score=39.81  Aligned_cols=25  Identities=12%  Similarity=0.205  Sum_probs=14.4

Q ss_pred             hccc--cccccCCCceeEEEEeccccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ++|.  ..||+||||.||++....-+.
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~   41 (303)
T 2vwi_A           15 DDYELQEVIGSGATAVVQAAYCAPKKE   41 (303)
T ss_dssp             CCCEEEEECC---CCCEEEEEC----C
T ss_pred             hhhhhhheeccccceEEEEEEECCCCc
Confidence            4455  899999999999997654333

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=84.43  E-value=0.41  Score=41.38  Aligned_cols=26  Identities=15%  Similarity=0.100  Sum_probs=13.9

Q ss_pred             hccc--cccccCCCceeEEEEecccccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQN  268 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~~  268 (291)
                      +.|.  ..||+|+||.||++.-..-++.
T Consensus        25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~   52 (367)
T 1cm8_A           25 AVYRDLQPVGSGAYGAVCSAVDGRTGAK   52 (367)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCE
T ss_pred             ceEEEeEEeeecCCeEEEEEEECCCCCE
Confidence            3455  7899999999999987554443

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=84.38  E-value=0.34  Score=41.13  Aligned_cols=21  Identities=14%  Similarity=0.260  Sum_probs=17.5

Q ss_pred             cccccCCCceeEEEEeccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ..||+||||.||+++...-++
T Consensus        47 ~~lg~G~~g~Vy~~~~~~~~~   67 (335)
T 2owb_A           47 RFLGKGGFAKCFEISDADTKE   67 (335)
T ss_dssp             EEEEEETTEEEEEEEETTTCC
T ss_pred             EEEeeCCCeEEEEEEECCCCC
Confidence            789999999999998765443

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=84.34  E-value=0.42  Score=40.99  Aligned_cols=20  Identities=10%  Similarity=-0.042  Sum_probs=16.7

Q ss_pred             cccccCCCceeEEEEecccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ..||+||||.||+++-..-+
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~   44 (373)
T 1q8y_A           25 RKLGWGHFSTVWLAKDMVNN   44 (373)
T ss_dssp             EEEEECSSEEEEEEEETTTT
T ss_pred             EeeeecCCeEEEEEEecCCC
Confidence            79999999999999864433

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=84.33  E-value=0.44  Score=39.89  Aligned_cols=24  Identities=21%  Similarity=0.505  Sum_probs=19.1

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ++|.  ..||+|+||.||+++...-+
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~   59 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRE   59 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTT
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCC
Confidence            4555  89999999999999865443

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=84.22  E-value=0.38  Score=40.50  Aligned_cols=18  Identities=17%  Similarity=0.110  Sum_probs=15.7

Q ss_pred             cccccCCCceeEEEEecc
Q 022858          247 HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~  264 (291)
                      ..||+|+||.||++.-..
T Consensus        20 ~~lg~G~~g~V~~~~~~~   37 (339)
T 1z57_A           20 DTLGEGAFGKVVECIDHK   37 (339)
T ss_dssp             EEEEEETTEEEEEEEETT
T ss_pred             EEEecCCCeEEEEEEecC
Confidence            789999999999998633

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=84.12  E-value=0.45  Score=39.72  Aligned_cols=22  Identities=18%  Similarity=0.335  Sum_probs=13.0

Q ss_pred             cccccCCCceeEEEEecccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQN  268 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~~  268 (291)
                      ..||+||||.||+|....-++.
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~   38 (320)
T 2i6l_A           17 KPLGCGGNGLVFSAVDNDCDKR   38 (320)
T ss_dssp             EECC-----CEEEEEETTTTEE
T ss_pred             EEeccCCCeEEEEEEECCCCeE
Confidence            6899999999999987654443

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=84.01  E-value=0.49  Score=40.06  Aligned_cols=24  Identities=17%  Similarity=-0.050  Sum_probs=19.1

Q ss_pred             cccccccCCCceeEEEEecccccc
Q 022858          245 FTHLLVSGGSGALYKLQRDFWQQN  268 (291)
Q Consensus       245 F~~~lG~GGfG~VYkG~l~~~~~~  268 (291)
                      +...||+|+||.||++....-+..
T Consensus        15 ~~~~lG~G~~g~V~~~~~~~~~~~   38 (326)
T 2y0a_A           15 TGEELGSGQFAVVKKCREKSTGLQ   38 (326)
T ss_dssp             EEEEEECCSSEEEEEEEETTTCCE
T ss_pred             eceEEeeCCCeEEEEEEECCCCcE
Confidence            447899999999999987655443

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=83.95  E-value=0.28  Score=42.90  Aligned_cols=18  Identities=11%  Similarity=0.250  Sum_probs=16.0

Q ss_pred             cccccCCCceeEEEEecc
Q 022858          247 HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~  264 (291)
                      ..||+||||.||+++...
T Consensus        46 ~~lG~G~~g~V~~a~~~~   63 (394)
T 4e7w_A           46 KVIGNGSFGVVFQAKLVE   63 (394)
T ss_dssp             EEEEEETTEEEEEEEETT
T ss_pred             EEEeeCCCeEEEEEEECC
Confidence            789999999999998654

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=83.85  E-value=0.35  Score=39.61  Aligned_cols=17  Identities=6%  Similarity=0.202  Sum_probs=15.5

Q ss_pred             cccccCCCceeEEEEec
Q 022858          247 HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~  263 (291)
                      ..||+|+||.||+|...
T Consensus        53 ~~ig~G~~g~Vy~a~~~   69 (258)
T 1zth_A           53 GVISTGKEANVFYADGV   69 (258)
T ss_dssp             EEEEECSSEEEEEEEEE
T ss_pred             CEEeecceEEEEEEEEc
Confidence            78999999999999873

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=83.81  E-value=0.45  Score=40.51  Aligned_cols=23  Identities=17%  Similarity=0.196  Sum_probs=18.4

Q ss_pred             cccccccCCCceeEEEEeccccc
Q 022858          245 FTHLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       245 F~~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ....||+||||.||+|....-++
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~   37 (353)
T 2b9h_A           15 LKSLLGEGAYGVVCSATHKPTGE   37 (353)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTE
T ss_pred             EeeEEcCCCCeEEEEEEECCCCc
Confidence            34689999999999998765444

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=83.80  E-value=0.47  Score=38.83  Aligned_cols=23  Identities=17%  Similarity=0.199  Sum_probs=18.2

Q ss_pred             ccccccCCCceeEEEEecccccc
Q 022858          246 THLLVSGGSGALYKLQRDFWQQN  268 (291)
Q Consensus       246 ~~~lG~GGfG~VYkG~l~~~~~~  268 (291)
                      ...||+|+||.||+|+...-++.
T Consensus        16 ~~~lg~G~~g~Vy~~~~~~~~~~   38 (278)
T 3cok_A           16 GNLLGKGSFAGVYRAESIHTGLE   38 (278)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCE
T ss_pred             eeeecCCCceEEEEEEEccCCce
Confidence            46899999999999987554443

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=83.68  E-value=0.48  Score=38.69  Aligned_cols=26  Identities=15%  Similarity=0.065  Sum_probs=19.9

Q ss_pred             ccccccCCCceeEEEEecccccceee
Q 022858          246 THLLVSGGSGALYKLQRDFWQQNQCV  271 (291)
Q Consensus       246 ~~~lG~GGfG~VYkG~l~~~~~~~~~  271 (291)
                      ...||+|+||.||+|+...-++.-++
T Consensus        16 ~~~lg~G~~g~V~~~~~~~~~~~vai   41 (276)
T 2h6d_A           16 GDTLGVGTFGKVKIGEHQLTGHKVAV   41 (276)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEE
T ss_pred             EeeecCCCCeEEEEEEECCCCceEEE
Confidence            36899999999999988755544433

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=83.61  E-value=0.41  Score=40.59  Aligned_cols=23  Identities=13%  Similarity=0.070  Sum_probs=18.3

Q ss_pred             ccc--cccccCCCceeEEEEecccc
Q 022858          244 NFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      +|.  ..||+|+||.||++.-..-+
T Consensus        20 ~y~~~~~lg~G~~g~V~~~~~~~~~   44 (355)
T 2eu9_A           20 RYEIVGNLGEGTFGKVVECLDHARG   44 (355)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTT
T ss_pred             cEEEEEEeeccCCeEEEEEEecCCC
Confidence            455  78999999999999865443

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=83.56  E-value=0.62  Score=38.90  Aligned_cols=18  Identities=11%  Similarity=0.076  Sum_probs=15.3

Q ss_pred             cccccCCCceeEEEEecc
Q 022858          247 HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~  264 (291)
                      ..||+|+||.||++.-..
T Consensus        19 ~~lg~G~~g~V~~~~~~~   36 (316)
T 2ac3_A           19 DVLGEGAHARVQTCINLI   36 (316)
T ss_dssp             CCCCCCSSEEEEEEECSS
T ss_pred             ceecCCceEEEEEEEEcC
Confidence            579999999999997543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=83.49  E-value=0.43  Score=44.68  Aligned_cols=16  Identities=31%  Similarity=0.150  Sum_probs=14.2

Q ss_pred             cccccCCCceeEEEEe
Q 022858          247 HLLVSGGSGALYKLQR  262 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l  262 (291)
                      .+||+||||.||+|..
T Consensus       375 ~~LG~G~fG~Vy~~~~  390 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYY  390 (635)
T ss_dssp             EEEEECSSEEEEEEEE
T ss_pred             CEeccCCCEEEEEEEE
Confidence            3799999999999965

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=83.40  E-value=0.46  Score=39.75  Aligned_cols=24  Identities=13%  Similarity=0.047  Sum_probs=16.7

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ++|.  ..||+||||.||+++-..-+
T Consensus        29 ~~y~~~~~lg~G~~g~V~~~~~~~~~   54 (317)
T 2buj_A           29 KHYLFIQKLGEGGFSYVDLVEGLHDG   54 (317)
T ss_dssp             EEEEEEEEEEC--CEEEEEEEETTTC
T ss_pred             eEEEEEEEecCCCCeEEEEEEecCCC
Confidence            3455  89999999999999864433

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=83.32  E-value=0.67  Score=39.16  Aligned_cols=19  Identities=21%  Similarity=0.293  Sum_probs=16.6

Q ss_pred             CCCeEeecCCCCcEEEccC
Q 022858           20 QQQIIHYNIKPENILLDVK   38 (291)
Q Consensus        20 ~~~ivH~Dlkp~NIll~~~   38 (291)
                      ...++|+|+++.|||++.+
T Consensus       221 ~~~l~HgD~~~~Nil~~~~  239 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGEN  239 (346)
T ss_dssp             SCCEECSSCSTTSEEECGG
T ss_pred             cCceecCCCCcccEEEeCC
Confidence            3789999999999999754

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=83.27  E-value=0.43  Score=44.93  Aligned_cols=18  Identities=11%  Similarity=-0.088  Sum_probs=15.9

Q ss_pred             cccccCCCceeEEEEecc
Q 022858          247 HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~  264 (291)
                      ..||+||||.||+|....
T Consensus       396 ~~LG~G~fG~Vy~a~~~~  413 (656)
T 2j0j_A          396 RCIGEGQFGDVHQGIYMS  413 (656)
T ss_dssp             EEEECCSSCCEEEEEECC
T ss_pred             eEEeeCCCEEEEEEEEec
Confidence            679999999999998743

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=83.19  E-value=0.66  Score=38.52  Aligned_cols=16  Identities=19%  Similarity=0.358  Sum_probs=15.2

Q ss_pred             cccccCCCceeEEEEe
Q 022858          247 HLLVSGGSGALYKLQR  262 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l  262 (291)
                      ..||+|+||.||+|..
T Consensus        96 ~~iG~G~~g~Vy~~~~  111 (282)
T 1zar_A           96 KLMGEGKESAVFNCYS  111 (282)
T ss_dssp             EEEEECSSEEEEEEEE
T ss_pred             CEeccCCCceEEEEEe
Confidence            7999999999999987

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=83.09  E-value=0.52  Score=42.53  Aligned_cols=24  Identities=17%  Similarity=0.231  Sum_probs=15.9

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      +.|.  .+||+||||.||+++-..-+
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~   62 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTH   62 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTC
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCC
Confidence            3455  79999999999999865443

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=82.87  E-value=0.45  Score=40.20  Aligned_cols=20  Identities=10%  Similarity=-0.119  Sum_probs=16.7

Q ss_pred             cccccCCCceeEEEEecccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~  266 (291)
                      .+||+||||.||+++...-+
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~   54 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISKSTG   54 (327)
T ss_dssp             EEEEEETTEEEEEEEETTTC
T ss_pred             ceeCCCCCeEEEEEEECCCC
Confidence            67999999999999875443

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=82.80  E-value=0.5  Score=42.34  Aligned_cols=25  Identities=12%  Similarity=0.244  Sum_probs=19.1

Q ss_pred             hccc--cccccCCCceeEEEEeccccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ++|.  .+||+||||.||++.-..-++
T Consensus        62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~   88 (464)
T 3ttj_A           62 KRYQNLKPIGSGAQGIVCAAYDAVLDR   88 (464)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred             CCeEEEEEeecCCCeEEEEEEECCCCC
Confidence            4455  789999999999997654443

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=82.67  E-value=0.47  Score=39.42  Aligned_cols=21  Identities=19%  Similarity=0.303  Sum_probs=16.9

Q ss_pred             cccccCCCceeEEEEeccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ..||+||||.||+++-..-+.
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~   37 (294)
T 4eqm_A           17 DKLGGGGMSTVYLAEDTILNI   37 (294)
T ss_dssp             EEEEEETTEEEEEEEETTTCS
T ss_pred             EEEccCCCEEEEEEEECCCCC
Confidence            689999999999998554443

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=82.04  E-value=0.65  Score=41.73  Aligned_cols=21  Identities=29%  Similarity=0.325  Sum_probs=17.4

Q ss_pred             cccccCCCceeEEEEeccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .+||+|+||.||++.-..-++
T Consensus        28 ~~lG~G~~g~V~~~~~~~~~~   48 (486)
T 3mwu_A           28 CMLGKGSFGEVLKCKDRITQQ   48 (486)
T ss_dssp             EEEECCSSSEEEEEEETTTCC
T ss_pred             EEEeecCCEEEEEEEECCCCC
Confidence            799999999999998654443

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=81.85  E-value=4.1  Score=32.55  Aligned_cols=68  Identities=12%  Similarity=0.057  Sum_probs=38.3

Q ss_pred             hhHHHHHHHHHHHH-hcCCCCCeEeecCCCCcEEEccCCC-----------CCccccCccccCCCCccccceechhHHHH
Q 022858            2 HIIAIGTAEGIVSL-HDGCQQQIIHYNIKPENILLDVKFW-----------TPGYAAPETWMSFPVTHKCDVRSFGMLLF   69 (291)
Q Consensus         2 l~i~~~ia~gL~yl-H~~~~~~ivH~Dlkp~NIll~~~~~-----------t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~   69 (291)
                      +-++.|.+.+|.-+ +..  .+ ..+=+.|..|++..++.           ...+.+||... ...+.+.=|||+|+++|
T Consensus        52 WALc~Qc~~~L~~~~~~~--~~-~~~i~~~~~i~l~~dG~V~f~~~~s~~~~~~~~~pe~~~-~~~te~~~IysLG~tLY  127 (229)
T 2yle_A           52 WAVCYQCCGSLRAAARRR--QP-RHRVRSAAQIRVWRDGAVTLAPAADDAGEPPPVAGKLGY-SQCMETEVIESLGIIIY  127 (229)
T ss_dssp             HHHHHHHHHHHHHHHHTT--CC-CCCCCSGGGEEEETTSCEEECCC------------CCSS-SSSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhcc--cC-CceecCCcceEEecCCceecccccccccccCCCChhhcc-ccchHHHHHHHHHHHHH
Confidence            34567777777665 110  11 12234467888877765           22356777653 23356677999999999


Q ss_pred             HHhh
Q 022858           70 EILG   73 (291)
Q Consensus        70 ellt   73 (291)
                      ..+-
T Consensus       128 ~ALD  131 (229)
T 2yle_A          128 KALD  131 (229)
T ss_dssp             HHHT
T ss_pred             HHhh
Confidence            9884

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=81.82  E-value=0.65  Score=38.33  Aligned_cols=19  Identities=11%  Similarity=0.193  Sum_probs=15.9

Q ss_pred             ccccccCCCceeEEEEecc
Q 022858          246 THLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       246 ~~~lG~GGfG~VYkG~l~~  264 (291)
                      ...||+|+||.||+|+-..
T Consensus        15 ~~~lg~G~~g~V~~~~~~~   33 (298)
T 1csn_A           15 GRRIGEGSFGVIFEGTNLL   33 (298)
T ss_dssp             EEEEEECSSCEEEEEEETT
T ss_pred             EEEEeecCCEEEEEEEECC
Confidence            3589999999999998543

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=81.81  E-value=0.7  Score=37.78  Aligned_cols=19  Identities=32%  Similarity=0.597  Sum_probs=16.3

Q ss_pred             ccccccCCCceeEEEEecc
Q 022858          246 THLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       246 ~~~lG~GGfG~VYkG~l~~  264 (291)
                      ...||+|+||.||++....
T Consensus        16 ~~~lg~G~~g~V~~~~~~~   34 (284)
T 2a19_B           16 IELIGSGGFGQVFKAKHRI   34 (284)
T ss_dssp             EEEEECSSSCCEEEEEETT
T ss_pred             eeeeccCCceEEEEEEEcC
Confidence            3689999999999998753

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=81.70  E-value=0.54  Score=38.43  Aligned_cols=21  Identities=19%  Similarity=0.235  Sum_probs=17.0

Q ss_pred             ccccccCCCceeEEEEecccc
Q 022858          246 THLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       246 ~~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ...||+|+||.||+++...-+
T Consensus        16 ~~~lg~G~~g~V~~~~~~~~~   36 (289)
T 1x8b_A           16 LEKIGSGEFGSVFKCVKRLDG   36 (289)
T ss_dssp             EEEEEEETTEEEEEEEETTTC
T ss_pred             hhhhcCCCceEEEEEEEcCCC
Confidence            368999999999999875433

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=81.40  E-value=0.55  Score=41.57  Aligned_cols=24  Identities=29%  Similarity=0.441  Sum_probs=19.0

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ++|.  ..||+|+||.||+++-..-+
T Consensus        26 ~~y~~~~~lG~G~~g~V~~a~~~~~~   51 (432)
T 3n9x_A           26 DNYIIKHLIGRGSYGYVYLAYDKNTE   51 (432)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTT
T ss_pred             CCEEEEEEEeecCCEEEEEEEECCCC
Confidence            3455  78999999999999865443

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=81.21  E-value=0.73  Score=41.51  Aligned_cols=22  Identities=14%  Similarity=0.087  Sum_probs=18.0

Q ss_pred             cccccCCCceeEEEEecccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQN  268 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~~  268 (291)
                      ..||+|+||.||+|+...-++.
T Consensus        22 ~~LG~G~fg~V~~a~~~~~g~~   43 (476)
T 2y94_A           22 DTLGVGTFGKVKVGKHELTGHK   43 (476)
T ss_dssp             EEEECCSSSCEEEEEETTTCCE
T ss_pred             EEEeeCCCeEEEEEEECCCCCE
Confidence            7899999999999987654443

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=80.91  E-value=0.59  Score=41.94  Aligned_cols=24  Identities=17%  Similarity=0.250  Sum_probs=18.9

Q ss_pred             ccc--cccccCCCceeEEEEeccccc
Q 022858          244 NFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .|.  ..||+|+||.||+++-..-++
T Consensus        27 ~y~~~~~lg~G~~g~V~~~~~~~~~~   52 (484)
T 3nyv_A           27 RYKGQRVLGKGSFGEVILCKDKITGQ   52 (484)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCC
T ss_pred             ceEEeeEEecCCCEEEEEEEECCCCC
Confidence            455  789999999999998665443

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=80.39  E-value=0.6  Score=39.79  Aligned_cols=21  Identities=19%  Similarity=0.213  Sum_probs=17.1

Q ss_pred             ccccccCCCceeEEEEecccc
Q 022858          246 THLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       246 ~~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ...||+||||.||+|....-+
T Consensus        15 ~~~lg~G~~g~Vy~~~~~~~~   35 (346)
T 1ua2_A           15 LDFLGEGQFATVYKARDKNTN   35 (346)
T ss_dssp             EEEEEEETTEEEEEEECSSCC
T ss_pred             EeEEeecCCEEEEEEEECCCC
Confidence            368999999999999875433

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=80.20  E-value=0.62  Score=42.69  Aligned_cols=16  Identities=19%  Similarity=0.312  Sum_probs=8.7

Q ss_pred             cccccCCCceeEEEEe
Q 022858          247 HLLVSGGSGALYKLQR  262 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l  262 (291)
                      ++||+|+||.||||..
T Consensus       342 ~~LG~G~fg~Vy~~~~  357 (540)
T 3en9_A          342 HLIGKGAEADIKRDSY  357 (540)
T ss_dssp             ------CCEEEEEEEC
T ss_pred             CEEeeCCCEEEEEEEE
Confidence            6899999999999943

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=80.05  E-value=0.46  Score=39.89  Aligned_cols=18  Identities=17%  Similarity=0.254  Sum_probs=15.8

Q ss_pred             ccccccCCCceeEEEEec
Q 022858          246 THLLVSGGSGALYKLQRD  263 (291)
Q Consensus       246 ~~~lG~GGfG~VYkG~l~  263 (291)
                      ...||+||||.||+++..
T Consensus        16 ~~~lg~G~~g~V~~~~~~   33 (326)
T 1blx_A           16 VAEIGEGAYGKVFKARDL   33 (326)
T ss_dssp             EEEEEEETTEEEEEEEET
T ss_pred             eeeecccccEEEEEEEec
Confidence            368999999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	291
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-12
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-12
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-12
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-11
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-11
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-11
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-11
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-11
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	7e-11
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	7e-11
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-10
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-10
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-10
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-10
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-10
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-10
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-10
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-10
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-10
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-10
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-10
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-09
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-09
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-09
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-09
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-09
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-09
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-09
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	7e-09
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	8e-09
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	9e-09
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-08
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-08
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-08
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-08
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-08
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-08
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-08
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-08
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	6e-08
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-07
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-07
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-07
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-06
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-06
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	5e-06
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-05
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-05
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-05
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-05
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-04
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-04
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-04
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	0.001
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	0.002
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	0.003

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 2e-12
 Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 24/95 (25%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------T 41
           ++I   +G+  L +  + +I+H ++KP NIL++ +                        T
Sbjct: 109 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 166

Query: 42  PGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRR 76
             Y +PE       + + D+ S G+ L E+   R 
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 201

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (153), Expect = 4e-12
 Identities = 32/168 (19%), Positives = 57/168 (33%), Gaps = 44/168 (26%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
           IA  TA+G+  LH    + IIH ++K  NI L                            
Sbjct: 109 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165

Query: 41  ---TPGYAAPETWMSF---PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWV 94
              +  + APE        P + + DV +FG++L+E++      T Q   S   +    +
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM------TGQLPYSNI-NNRDQI 218

Query: 95  WKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
              + +G     +      K      + M  +    ++ K +  P   
Sbjct: 219 IFMVGRGYLSPDL-----SKVRSNCPKAMKRLMAECLKKKRDERPLFP 261

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (152), Expect = 5e-12
 Identities = 26/140 (18%), Positives = 42/140 (30%), Gaps = 37/140 (26%)

Query: 4   IAIGTAEGIVSLHD--GCQQQIIHYNIKPENILLD----VK------------------- 38
           +       +   H        ++H ++KP N+ LD    VK                   
Sbjct: 114 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA 173

Query: 39  -FWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSG 90
              TP Y +PE         K D+ S G LL+E+           +     K R G    
Sbjct: 174 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 233

Query: 91  FKWVWKKLEKGEFQDLIIVC 110
             + +      E  ++I   
Sbjct: 234 IPYRYSD----ELNEIITRM 249

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.5 bits (146), Expect = 2e-11
 Identities = 22/136 (16%), Positives = 47/136 (34%), Gaps = 32/136 (23%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
           + +   EG   +    +  +IH ++   N L+                            
Sbjct: 106 MCLDVCEG---MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 162

Query: 40  -WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRR----MRTCQKARSGFPSGFKWV 94
            +   +A+PE +     + K DV SFG+L++E+    +     R+  +      +GF+  
Sbjct: 163 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY 222

Query: 95  WKKLEKGEFQDLIIVC 110
             +L       ++  C
Sbjct: 223 KPRLASTHVYQIMNHC 238

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 2e-11
 Identities = 22/95 (23%), Positives = 32/95 (33%), Gaps = 25/95 (26%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------T 41
                A  +   H    +++IH +IKPEN+LL                           T
Sbjct: 111 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 167

Query: 42  PGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRR 76
             Y  PE         K D+ S G+L +E L  + 
Sbjct: 168 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 202

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (145), Expect = 3e-11
 Identities = 29/160 (18%), Positives = 44/160 (27%), Gaps = 40/160 (25%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF---------------------WTP 42
            ++   E +  L        +H ++   N+L+                            
Sbjct: 108 FSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 164

Query: 43  GYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGE 102
            + APE       + K DV SFG+LL+EI    R               K V  ++EKG 
Sbjct: 165 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR-------VPYPRIPLKDVVPRVEKGY 217

Query: 103 FQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
             D    C            +  V            PS  
Sbjct: 218 KMDAPDGC---------PPAVYEVMKNCWHLDAAMRPSFL 248

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.9 bits (144), Expect = 6e-11
 Identities = 31/181 (17%), Positives = 50/181 (27%), Gaps = 43/181 (23%)

Query: 4   IAIGTAEGIVSLHDGC-----QQQIIHYNIKPENILLDVKF------------------- 39
           +A+ TA G+  LH        +  I H ++K +NIL+                       
Sbjct: 105 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 164

Query: 40  ---------WTPGYAAPE------TWMSFPVTHKCDVRSFGMLLFEILGRRR----MRTC 80
                     T  Y APE          F    + D+ + G++ +EI  R          
Sbjct: 165 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 224

Query: 81  QKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPS 140
           Q            V +  +    Q L         + E    MA +          A  +
Sbjct: 225 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 284

Query: 141 M 141
            
Sbjct: 285 A 285

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.7 bits (144), Expect = 6e-11
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 34/143 (23%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--------------------- 39
             +     AE  ++L     + II+ ++KPENILLD                        
Sbjct: 103 NPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLC 162

Query: 40  WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGFK 92
            TP Y APE   + P     D  SFG+L++E+L           M+T +K  +       
Sbjct: 163 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP 222

Query: 93  WVWKKLEKGEFQDLIIVCGMEKN 115
           +  +     + +DL+    + ++
Sbjct: 223 FFNE-----DVKDLLSRL-ITRD 239

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 59.7 bits (144), Expect = 7e-11
 Identities = 26/144 (18%), Positives = 50/144 (34%), Gaps = 37/144 (25%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
                 +G+  +H+      +H ++KPENI+   K                         
Sbjct: 129 YMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT 185

Query: 40  -WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGF 91
             T  +AAPE     PV +  D+ S G+L + +L       G     T +  +S   +  
Sbjct: 186 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 245

Query: 92  KWVWKKLEKGEFQDLIIVCGMEKN 115
              +  + + + +D I    +  +
Sbjct: 246 DSAFSGISE-DGKDFIRKL-LLAD 267

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (143), Expect = 7e-11
 Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 37/143 (25%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VKF-------------------- 39
           +     + +  LH     Q+IH +IK +NILL     VK                     
Sbjct: 121 VCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 177

Query: 40  WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGFK 92
            TP + APE         K D+ S G++  E++           +R      +      +
Sbjct: 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ 237

Query: 93  WVWKKLEKGEFQDLIIVCGMEKN 115
              +KL    F+D +  C ++ +
Sbjct: 238 N-PEKLSA-IFRDFLNRC-LDMD 257

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 1e-10
 Identities = 33/190 (17%), Positives = 57/190 (30%), Gaps = 57/190 (30%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD--------------------------V 37
            A   A G   +     ++ IH ++   N+L+                            
Sbjct: 140 CAYQVARG---MEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196

Query: 38  KFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFP-SGFKWVWK 96
                 + APE       TH+ DV SFG+LL+EI               +P    + ++K
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--------YPGVPVEELFK 248

Query: 97  KLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLAS 156
            L++G   D    C            + ++        P   P+             L  
Sbjct: 249 LLKEGHRMDKPSNC---------TNELYMMMRDCWHAVPSQRPTFK----------QLVE 289

Query: 157 MLNVSSAMSS 166
            L+   A++S
Sbjct: 290 DLDRIVALTS 299

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (141), Expect = 1e-10
 Identities = 26/165 (15%), Positives = 47/165 (28%), Gaps = 44/165 (26%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
            A   A+G+  L     +  +H ++   N+L+                            
Sbjct: 169 FAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGN 225

Query: 41  ---TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKK 97
                 + APE+      T K DV S+G+LL+EI       +               +K 
Sbjct: 226 ARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF------SLGVNPYPGIPVDANFYKL 279

Query: 98  LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
           ++ G   D               E + ++      +     PS  
Sbjct: 280 IQNGFKMDQPFYA---------TEEIYIIMQSCWAFDSRKRPSFP 315

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (139), Expect = 2e-10
 Identities = 30/162 (18%), Positives = 52/162 (32%), Gaps = 42/162 (25%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
            A   A G   +    Q+Q IH ++   NIL+   +                        
Sbjct: 132 FAADVARG---MDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRL 188

Query: 41  TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK 100
              + A E+      T   DV S+G+LL+EI+       C             +++KL +
Sbjct: 189 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-------AELYEKLPQ 241

Query: 101 GEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
           G   +  + C          + +  +     + KP   PS  
Sbjct: 242 GYRLEKPLNC---------DDEVYDLMRQCWREKPYERPSFA 274

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.7 bits (139), Expect = 2e-10
 Identities = 33/164 (20%), Positives = 53/164 (32%), Gaps = 44/164 (26%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
           +A   AEG+  +    ++  IH +++  NIL+                            
Sbjct: 114 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 170

Query: 41  --TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKL 98
                + APE       T K DV SFG+LL EI+   R+                V + L
Sbjct: 171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-------EVIQNL 223

Query: 99  EKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
           E+G        C          E +  +     + +PE  P+  
Sbjct: 224 ERGYRMVRPDNC---------PEELYQLMRLCWKERPEDRPTFD 258

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 3e-10
 Identities = 35/149 (23%), Positives = 51/149 (34%), Gaps = 42/149 (28%)

Query: 3   IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF----------------------- 39
           ++   T + +  LHD    +IIH ++K  NIL  +                         
Sbjct: 114 VVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 170

Query: 40  -WTPGYAAPETWMSF-----PVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSG 86
             TP + APE  M       P  +K DV S G+ L E+            MR   K    
Sbjct: 171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS 230

Query: 87  FPSGFKWVWKKLEKGEFQDLIIVCGMEKN 115
            P        +     F+D +  C +EKN
Sbjct: 231 EPPTLAQ-PSRWSS-NFKDFLKKC-LEKN 256

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 3e-10
 Identities = 24/140 (17%), Positives = 46/140 (32%), Gaps = 38/140 (27%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VKFW------------------- 40
               TAE + +L     + IIH ++KPENILL+    ++                     
Sbjct: 110 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 169

Query: 41  ---TPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSG 90
              T  Y +PE           D+ + G ++++++               QK        
Sbjct: 170 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 229

Query: 91  FKWVWKKLEKGEFQDLIIVC 110
            +  +      + +DL+   
Sbjct: 230 PEKFFP-----KARDLVEKL 244

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.9 bits (137), Expect = 3e-10
 Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 25/96 (26%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
                 +G+  LH      IIH ++K +NI +                            
Sbjct: 117 WCRQILKGLQFLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIG 175

Query: 41  TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRR 76
           TP + APE +         DV +FGM + E+     
Sbjct: 176 TPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEY 210

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 4e-10
 Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 44/167 (26%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------- 40
           +  +     E +  L     +Q +H ++   N L++ +                      
Sbjct: 102 LLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 158

Query: 41  -----TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVW 95
                   ++ PE  M    + K D+ +FG+L++EI    +                  +
Sbjct: 159 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK----------------MPY 202

Query: 96  KKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
           ++    E  + I            +E++  +       K +  P+  
Sbjct: 203 ERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFK 249

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (137), Expect = 4e-10
 Identities = 29/167 (17%), Positives = 51/167 (30%), Gaps = 47/167 (28%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
             +  A+G   +     ++ +H ++   N +LD KF                        
Sbjct: 135 FGLQVAKG---MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 191

Query: 41  -----TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVW 95
                   + A E+  +   T K DV SFG+LL+E++ R              + F    
Sbjct: 192 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV------NTFDITV 245

Query: 96  KKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
             L+                 +   + +  V L     K E  PS +
Sbjct: 246 YLLQGRRLLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFS 282

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (136), Expect = 5e-10
 Identities = 19/154 (12%), Positives = 38/154 (24%), Gaps = 43/154 (27%)

Query: 16  HDGCQQQIIHYNIKPENILLDVKF---------------------------WTPGYAAPE 48
                   +H ++   NIL++                                  + APE
Sbjct: 124 KYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 183

Query: 49  TWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLII 108
                  T   DV SFG++++E++                      + +L   E    I 
Sbjct: 184 AISYRKFTSASDVWSFGIVMWEVMTYGE----------------RPYWELSNHEVMKAIN 227

Query: 109 VCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
                    +    +  + +   Q +    P   
Sbjct: 228 DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFA 261

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.5 bits (136), Expect = 6e-10
 Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 26/96 (27%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------TPG 43
           +  G  +G+  LH      +IH ++K  NILL                         TP 
Sbjct: 120 VTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPY 176

Query: 44  YAAPETWMSF---PVTHKCDVRSFGMLLFEILGRRR 76
           + APE  ++        K DV S G+   E+  R+ 
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 212

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.4 bits (135), Expect = 8e-10
 Identities = 23/165 (13%), Positives = 44/165 (26%), Gaps = 45/165 (27%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
           IA   A G+  L    +++ +H ++   N L+                            
Sbjct: 145 IARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGN 201

Query: 40  --WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKK 97
                 +  PE+      T + DV ++G++L+EI           A        + V   
Sbjct: 202 DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH-------EEVIYY 254

Query: 98  LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
           +  G               +     +  +        P   PS  
Sbjct: 255 VRDGNILAC---------PENCPLELYNLMRLCWSKLPADRPSFC 290

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 2e-09
 Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 26/96 (27%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
           +      G+  LH     +++H ++KP+NIL+                            
Sbjct: 121 MMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 177

Query: 41  TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRR 76
           T  Y APE  +        D+ S G +  E+  R+ 
Sbjct: 178 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 213

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 2e-09
 Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 44/163 (26%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
           +A   A G+  +    +   +H +++  NIL+                            
Sbjct: 118 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 174

Query: 40  -WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKL 98
            +   + APE  +    T K DV SFG+LL E+                 +  +  +  +
Sbjct: 175 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT----------------TKGRVPYPGM 218

Query: 99  EKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSM 141
              E  D +          E  E +  +     + +PE  P+ 
Sbjct: 219 VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 261

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (130), Expect = 3e-09
 Identities = 19/165 (11%), Positives = 51/165 (30%), Gaps = 45/165 (27%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VKFW------------------- 40
             +  A+G+  L     ++++H ++   N+L+     VK                     
Sbjct: 116 WCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 172

Query: 41  ---TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKK 97
                 + A E+ +    TH+ DV S+G+ ++E++                +     +  
Sbjct: 173 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM----------------TFGSKPYDG 216

Query: 98  LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
           +   E   ++               + ++ +       ++ P   
Sbjct: 217 IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 261

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.0 bits (129), Expect = 4e-09
 Identities = 33/184 (17%), Positives = 58/184 (31%), Gaps = 50/184 (27%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
           +A   +  +  L    ++  IH ++   N L+                            
Sbjct: 120 MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 176

Query: 40  -WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKL 98
            +   + APE+      + K DV +FG+LL+EI             S        V++ L
Sbjct: 177 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-------QVYELL 229

Query: 99  EKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLASML 158
           EK    +    C          E++  +     Q+ P   PS         +H +  +M 
Sbjct: 230 EKDYRMERPEGC---------PEKVYELMRACWQWNPSDRPSFA------EIHQAFETMF 274

Query: 159 NVSS 162
             SS
Sbjct: 275 QESS 278

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 4e-09
 Identities = 22/94 (23%), Positives = 32/94 (34%), Gaps = 29/94 (30%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD--------------------------V 37
           I     E I  LH      I H ++KPEN+L                             
Sbjct: 116 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 172

Query: 38  KFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEI 71
             +TP Y APE          CD+ S G++++ +
Sbjct: 173 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 206

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 5e-09
 Identities = 25/101 (24%), Positives = 32/101 (31%), Gaps = 30/101 (29%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
                  G+V LH      I H +IKPEN+LLD +                         
Sbjct: 108 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 164

Query: 41  ---TPGYAAPETWMSFPV-THKCDVRSFGMLLFEILGRRRM 77
              T  Y APE            DV S G++L  +L     
Sbjct: 165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 5e-09
 Identities = 26/168 (15%), Positives = 53/168 (31%), Gaps = 45/168 (26%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK------------------ 38
           M  +A   A+G   +      + +H ++   N ++     VK                  
Sbjct: 135 MIQMAGEIADG---MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 191

Query: 39  ----FWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWV 94
                    + +PE+      T   DV SFG++L+EI                 +  +  
Sbjct: 192 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA----------------TLAEQP 235

Query: 95  WKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
           ++ L   +    ++  G+        + +  +     QY P+  PS  
Sbjct: 236 YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL 283

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 7e-09
 Identities = 24/165 (14%), Positives = 48/165 (29%), Gaps = 44/165 (26%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
            +   A+G+  L     +  IH ++   NILL                            
Sbjct: 150 FSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206

Query: 40  --WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKK 97
                 + APE+  +   T + DV S+G+ L+E+       +   +           +K 
Sbjct: 207 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF------SLGSSPYPGMPVDSKFYKM 260

Query: 98  LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
           +++G             + +     M  +        P   P+  
Sbjct: 261 IKEGF---------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 296

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 8e-09
 Identities = 32/166 (19%), Positives = 57/166 (34%), Gaps = 45/166 (27%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VKFW------------------- 40
            A+  AEG+  L     ++ IH ++   N+LL     VK                     
Sbjct: 116 YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 172

Query: 41  ----TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWK 96
                  + APE+  +   +H  D   FG+ L+E+       T  +      +G + + K
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF------TYGQEPWIGLNGSQILHK 226

Query: 97  KLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
             ++GE       C          + +  V +    +KPE  P+  
Sbjct: 227 IDKEGERLPRPEDC---------PQDIYNVMVQCWAHKPEDRPTFV 263

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.2 bits (127), Expect = 9e-09
 Identities = 22/168 (13%), Positives = 45/168 (26%), Gaps = 48/168 (28%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
           +  G A G+  L D      +H ++   NIL++                           
Sbjct: 133 MLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS 189

Query: 41  ------TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWV 94
                    + APE       T   DV S+G++++E++                   +  
Sbjct: 190 ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG----------------ERP 233

Query: 95  WKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
           +  +   +  + I          +    +  + L   Q      P   
Sbjct: 234 YWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFG 281

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 1e-08
 Identities = 26/165 (15%), Positives = 45/165 (27%), Gaps = 44/165 (26%)

Query: 3   IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------- 40
           + A   +     L     ++ +H +I   N+L+                           
Sbjct: 112 LYAYQLSTA---LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 168

Query: 41  ---TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKK 97
                 + APE+      T   DV  FG+ ++EIL           +         V  +
Sbjct: 169 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-------MHGVKPFQGVKNNDVIGR 221

Query: 98  LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
           +E GE   +   C            +  +      Y P   P  T
Sbjct: 222 IENGERLPMPPNC---------PPTLYSLMTKCWAYDPSRRPRFT 257

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 52.4 bits (125), Expect = 1e-08
 Identities = 31/160 (19%), Positives = 55/160 (34%), Gaps = 38/160 (23%)

Query: 9   AEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------T 41
           A+   +L+   Q  IIH ++KP NI++                                T
Sbjct: 118 ADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 177

Query: 42  PGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGFKWV 94
             Y +PE      V  + DV S G +L+E+L       G   +    +     P      
Sbjct: 178 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR 237

Query: 95  WKKLEKGEFQDLIIVCGMEKNNKEKAERMALV--ALWRVQ 132
            + L   +   +++   + KN + + +  A +   L RV 
Sbjct: 238 HEGLSA-DLDAVVLKA-LAKNPENRYQTAAEMRADLVRVH 275

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 52.4 bits (125), Expect = 2e-08
 Identities = 30/144 (20%), Positives = 51/144 (35%), Gaps = 37/144 (25%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK------------------------- 38
                 EG+  +H   +  I+H +IKPENI+ + K                         
Sbjct: 132 YMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT 188

Query: 39  FWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGF 91
             T  +AAPE     PV    D+ + G+L + +L       G   + T Q  +       
Sbjct: 189 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 248

Query: 92  KWVWKKLEKGEFQDLIIVCGMEKN 115
           +  +  +   E +D I    ++K 
Sbjct: 249 EDAFSSVSP-EAKDFIKNL-LQKE 270

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (124), Expect = 2e-08
 Identities = 30/165 (18%), Positives = 51/165 (30%), Gaps = 44/165 (26%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
            +   A+G+  L     ++ IH ++   NILL  K                         
Sbjct: 139 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 195

Query: 41  ---TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKK 97
                 + APET      T + DV SFG+LL+EI       +   +        +   ++
Sbjct: 196 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFCRR 249

Query: 98  LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
           L++G                     M    L     +P   P+ +
Sbjct: 250 LKEGTRMRAPDYT---------TPEMYQTMLDCWHGEPSQRPTFS 285

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 2e-08
 Identities = 23/166 (13%), Positives = 49/166 (29%), Gaps = 46/166 (27%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
           +    + G+  L    ++  +H ++   N+LL  + +                       
Sbjct: 114 LLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 170

Query: 41  ----TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWK 96
                  + APE       + + DV S+G+ ++E L   +    +            V  
Sbjct: 171 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM-------KGPEVMA 223

Query: 97  KLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
            +E+G+  +    C            +  +      YK E  P   
Sbjct: 224 FIEQGKRMECPPEC---------PPELYALMSDCWIYKWEDRPDFL 260

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 2e-08
 Identities = 23/143 (16%), Positives = 48/143 (33%), Gaps = 37/143 (25%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VKFW------------------- 40
                AE + +L     + +++ +IK EN++LD    +K                     
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 166

Query: 41  -TPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGFK 92
            TP Y APE           D    G++++E++        +   R  +          +
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226

Query: 93  WVWKKLEKGEFQDLIIVCGMEKN 115
            +       E + L+    ++K+
Sbjct: 227 TLSP-----EAKSLLAGL-LKKD 243

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 3e-08
 Identities = 29/166 (17%), Positives = 46/166 (27%), Gaps = 46/166 (27%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
           +    + G+  L    +   +H ++   N+LL  +                         
Sbjct: 112 LVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168

Query: 40  ---WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWK 96
              W   + APE    +  + K DV SFG+L++E     +                 V  
Sbjct: 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM-------KGSEVTA 221

Query: 97  KLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
            LEKGE       C            M  +      Y  E  P   
Sbjct: 222 MLEKGERMGCPAGC---------PREMYDLMNLCWTYDVENRPGFA 258

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 3e-08
 Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 36/139 (25%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK------------------------- 38
                 E +  LH      I H++I+PENI+   +                         
Sbjct: 107 YVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL 163

Query: 39  FWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGF 91
           F  P Y APE      V+   D+ S G L++ +L            +  +   +   +  
Sbjct: 164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD 223

Query: 92  KWVWKKLEKGEFQDLIIVC 110
           +  +K++   E  D +   
Sbjct: 224 EEAFKEISI-EAMDFVDRL 241

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 51.0 bits (121), Expect = 5e-08
 Identities = 18/134 (13%), Positives = 39/134 (29%), Gaps = 39/134 (29%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------- 40
           + + A      + S+H   ++ +++ +IKP+N L+                         
Sbjct: 103 VAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 159

Query: 41  ----------------TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKAR 84
                           T  Y +  T +    + + D+ + G +    L         KA 
Sbjct: 160 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA 219

Query: 85  SGFPSGFKWVWKKL 98
           +      +   KK 
Sbjct: 220 TNKQKYERIGEKKQ 233

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.0 bits (121), Expect = 6e-08
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 36/135 (26%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK---------------------FWTP 42
            A         LH      +I+ ++KPEN+L+D +                       TP
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTP 202

Query: 43  GYAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGFKWVW 95
              APE  +S       D  + G+L++E+          + ++  +K  SG         
Sbjct: 203 EALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFS 262

Query: 96  KKLEKGEFQDLIIVC 110
                 + +DL+   
Sbjct: 263 S-----DLKDLLRNL 272

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (118), Expect = 1e-07
 Identities = 33/138 (23%), Positives = 49/138 (35%), Gaps = 39/138 (28%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
            A     G   L     + I++ ++K +NILLD                           
Sbjct: 108 YAAEIILG---LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFC 164

Query: 41  -TPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGFK 92
            TP Y APE  +     H  D  SFG+LL+E+L       G+         R   P   +
Sbjct: 165 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR 224

Query: 93  WVWKKLEKGEFQDLIIVC 110
           W+ K     E +DL++  
Sbjct: 225 WLEK-----EAKDLLVKL 237

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 49.3 bits (117), Expect = 1e-07
 Identities = 33/143 (23%), Positives = 50/143 (34%), Gaps = 40/143 (27%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK-------------------FW 40
           I     E I +LH      I+H ++KPENILLD    +K                     
Sbjct: 115 IMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCG 171

Query: 41  TPGYAAPETWMSFPV------THKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGF 87
           TP Y APE               + D+ S G++++ +L        R++M   +   SG 
Sbjct: 172 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 231

Query: 88  PSGFKWVWKKLEKGEFQDLIIVC 110
                  W        +DL+   
Sbjct: 232 YQFGSPEWDDYSD-TVKDLVSRF 253

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.0 bits (116), Expect = 3e-07
 Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 32/143 (22%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----------------------VK 38
           M   A     G+  +H    + +++ ++KP NILLD                        
Sbjct: 109 MRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 165

Query: 39  FWTPGYAAPETWMS-FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKK 97
             T GY APE            D  S G +LF++L         K +         +   
Sbjct: 166 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 225

Query: 98  LEK-----GEFQDLIIVCGMEKN 115
           +E       E + L+    ++++
Sbjct: 226 VELPDSFSPELRSLLEGL-LQRD 247

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 1e-06
 Identities = 23/97 (23%), Positives = 33/97 (34%), Gaps = 25/97 (25%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VKFW------------------- 40
           I       +  L    Q  I+H ++KP N+LLD    +K                     
Sbjct: 102 IKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQV 161

Query: 41  -TPGYAAPETWMSF-PVTHKCDVRSFGMLLFEILGRR 75
            T  Y APE            D+ + G +L E+L R 
Sbjct: 162 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 198

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.0 bits (108), Expect = 2e-06
 Identities = 24/150 (16%), Positives = 41/150 (27%), Gaps = 47/150 (31%)

Query: 5   AIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------ 40
           A      I  +H    +  IH ++KP+N L+ +                           
Sbjct: 109 ADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI 165

Query: 41  ----------TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSG 90
                     T  YA+  T +    + + D+ S G +L             KA +     
Sbjct: 166 PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 225

Query: 91  FKWVWKKLEKG----------EFQDLIIVC 110
            +   KK+             EF   +  C
Sbjct: 226 ERISEKKMSTPIEVLCKGYPSEFATYLNFC 255

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 3e-06
 Identities = 25/135 (18%), Positives = 46/135 (34%), Gaps = 36/135 (26%)

Query: 15  LHDGCQQQIIHYNIKPENILLDVK---------------------------FWTPGYAAP 47
           ++     QI H+++KPENI+L  +                           F TP + AP
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185

Query: 48  ETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGFKWVWKKLEK 100
           E     P+  + D+ S G++ + +L       G  +  T     +         +     
Sbjct: 186 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSA 245

Query: 101 GEFQDLIIVCGMEKN 115
              +D I    + K+
Sbjct: 246 -LAKDFIRRL-LVKD 258

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.0 bits (105), Expect = 5e-06
 Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 29/96 (30%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFWT---------------------- 41
           I+     G+  +H   +  IIH +IKPEN+L+++                          
Sbjct: 130 ISKQLLLGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT 187

Query: 42  -----PGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
                  Y +PE  +  P     D+ S   L+FE++
Sbjct: 188 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELI 223

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 1e-05
 Identities = 23/100 (23%), Positives = 35/100 (35%), Gaps = 31/100 (31%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VK--------------------- 38
                  G+  +H      ++H ++KP N+LL+    +K                     
Sbjct: 114 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 170

Query: 39  --FWTPGYAAPE-TWMSFPVTHKCDVRSFGMLLFEILGRR 75
               T  Y APE    S   T   D+ S G +L E+L  R
Sbjct: 171 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 210

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 1e-05
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 25/101 (24%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF--------------------- 39
           + +I     + +  L      +++H ++KP+N+L++ +                      
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 160

Query: 40  ---WTPGYAAPETWMSFP-VTHKCDVRSFGMLLFEILGRRR 76
               T  Y APE  +     +   D+ S G +  E++ RR 
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 1e-05
 Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 24/86 (27%)

Query: 15  LHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWM 51
           +       ++H +IK ENIL+D+                          T  Y+ PE   
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR 182

Query: 52  SFPV-THKCDVRSFGMLLFEILGRRR 76
                     V S G+LL++++    
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDI 208

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 28/145 (19%), Positives = 47/145 (32%), Gaps = 38/145 (26%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD-------VKFW---------------- 40
           +     + +  LHD     I+H ++KPEN+L         +                   
Sbjct: 112 LIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST 168

Query: 41  ---TPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSG 90
              TPGY APE     P +   D  S G++ + +L            +  ++        
Sbjct: 169 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF 228

Query: 91  FKWVWKKLEKGEFQDLIIVCGMEKN 115
               W  +     +D I    MEK+
Sbjct: 229 DSPYWDDISD-SAKDFIRHL-MEKD 251

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 2e-05
 Identities = 21/98 (21%), Positives = 32/98 (32%), Gaps = 28/98 (28%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK------------------------F 39
                   +  +H      I H +IKP+N+LLD                           
Sbjct: 127 YMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 183

Query: 40  WTPGYAAP-ETWMSFPVTHKCDVRSFGMLLFEILGRRR 76
            +  Y AP   + +   T   DV S G +L E+L  + 
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 5e-05
 Identities = 15/101 (14%), Positives = 33/101 (32%), Gaps = 25/101 (24%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK---------------------- 38
             I+     + +  L     + ++H ++KP+N+L++                        
Sbjct: 100 PEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS 159

Query: 39  --FWTPGYAAPETWMSFPV-THKCDVRSFGMLLFEILGRRR 76
               T  Y  P+      + +   D+ S G +  E+    R
Sbjct: 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR 200

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 1e-04
 Identities = 29/148 (19%), Positives = 49/148 (33%), Gaps = 36/148 (24%)

Query: 2   HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD------------------------- 36
           H + I   E +++L    +  II+ +IK ENILLD                         
Sbjct: 129 HEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY 188

Query: 37  VKFWTPGYAAPETWMSFPVTH--KCDVRSFGMLLFEILGRRR-------MRTCQKARSGF 87
               T  Y AP+        H    D  S G+L++E+L             +  +     
Sbjct: 189 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI 248

Query: 88  PSGFKWVWKKLEKGEFQDLIIVCGMEKN 115
                   +++     +DLI    + K+
Sbjct: 249 LKSEPPYPQEMSA-LAKDLIQRL-LMKD 274

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 20/138 (14%), Positives = 40/138 (28%), Gaps = 36/138 (26%)

Query: 15  LHDGCQQQIIHYNIKPENILLD----VK------------------------FWTPGYAA 46
           L+   + +I+H ++K  N+L+     +K                          T  Y  
Sbjct: 130 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRP 189

Query: 47  PETWMSF-PVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGFKWVWKKL 98
           PE  +         D+   G ++ E+        G               S    VW  +
Sbjct: 190 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNV 249

Query: 99  EKGEFQDLIIVCGMEKNN 116
           +  E  + + +   +K  
Sbjct: 250 DNYELYEKLELVKGQKRK 267

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 2e-04
 Identities = 21/133 (15%), Positives = 48/133 (36%), Gaps = 32/133 (24%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD---------------------VKFWTP 42
           +     +G+  +H      IIH ++KP N+ ++                         T 
Sbjct: 126 LVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTR 182

Query: 43  GYAAPETWMSF-PVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGFKWV 94
            Y APE  +++   T   D+ S G ++ E++       G   +   ++      +     
Sbjct: 183 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 242

Query: 95  WKKLEKGEFQDLI 107
            ++L+  E ++ +
Sbjct: 243 VQRLQSDEAKNYM 255

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 0.001
 Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 26/95 (27%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF-----------------------W 40
           +      GI  LH       IH ++KP NI++                            
Sbjct: 124 LLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 180

Query: 41  TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRR 75
           T  Y APE  +        D+ S G ++ E++  +
Sbjct: 181 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 37.1 bits (85), Expect = 0.002
 Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 28/98 (28%)

Query: 4   IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------- 40
                 + +   H      I+H ++KP N+++D +                         
Sbjct: 134 YMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 190

Query: 41  -TPGYAAPETWMSFP-VTHKCDVRSFGMLLFEILGRRR 76
            +  +  PE  + +    +  D+ S G +L  ++ R+ 
Sbjct: 191 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 228

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 36.4 bits (83), Expect = 0.003
 Identities = 14/100 (14%), Positives = 34/100 (34%), Gaps = 25/100 (25%)

Query: 1   MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD------------------------ 36
                    + +  +     ++++H ++KP+N+L++                        
Sbjct: 99  SVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158

Query: 37  VKFWTPGYAAPETWMSF-PVTHKCDVRSFGMLLFEILGRR 75
            +  T  Y AP+  M     +   D+ S G +  E++   
Sbjct: 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	291
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.97
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.96
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.96
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.96
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.96
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.96
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.96
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.96
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.96
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.96
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.96
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.96
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.96
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.96
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.96
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.95
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.95
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.95
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.95
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.95
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.95
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.95
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.95
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.95
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.95
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.95
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.95
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.95
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.94
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.94
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.94
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.94
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.94
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.94
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.94
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.94
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.93
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.93
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.93
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.93
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.93
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.93
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.93
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.93
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.92
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.92
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.92
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.92
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.92
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.92
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.92
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.91
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.91
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.9
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.9
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.9
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.9
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.9
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.89
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.84
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	97.5
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	96.59
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	96.1
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	95.56
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	95.41
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	95.21
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	95.11
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	95.02
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	94.93
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	94.5
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	94.3
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	94.24
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	94.22
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	94.09
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	93.81
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	93.72
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	93.35
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	93.2
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	93.19
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	93.14
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	93.09
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	92.92
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	92.72
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	92.55
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	92.46
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	92.37
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	91.65
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	90.3

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.9e-32  Score=231.65  Aligned_cols=138  Identities=22%  Similarity=0.248  Sum_probs=107.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccC---
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMS---   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~---   52 (291)
                      ++|+.|||.||+|||+   ++||||||||+|||++.++.                          |+.|||||++.+   
T Consensus       107 ~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~  183 (276)
T d1uwha_         107 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK  183 (276)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSS
T ss_pred             HHHHHHHHHHHHHHhc---CCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccC
Confidence            5789999999999999   99999999999999987654                          789999999864   


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++|||||||++|||+||+.||......       ..+......+.....     .......++..+.+++.+||+
T Consensus       184 ~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~-------~~~~~~~~~~~~~p~-----~~~~~~~~~~~l~~li~~cl~  251 (276)
T d1uwha_         184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-------DQIIFMVGRGYLSPD-----LSKVRSNCPKAMKRLMAECLK  251 (276)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-------HHHHHHHHHTSCCCC-----GGGSCTTCCHHHHHHHHHHTC
T ss_pred             CCCCchhhhhhhHHHHHHHHHCCCCCCCCChH-------HHHHHHHhcCCCCCc-----chhccccchHHHHHHHHHHcC
Confidence            35899999999999999999999999754321       222222322221111     112233445788999999999


Q ss_pred             cCCCCCCCCCccchhhhhhccccc
Q 022858          133 YKPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       133 ~~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      .||++|||+.||  ++.|+.+.+.
T Consensus       252 ~dp~~RPt~~~i--l~~Le~l~~~  273 (276)
T d1uwha_         252 KKRDERPLFPQI--LASIELLARS  273 (276)
T ss_dssp             SSGGGSCCHHHH--HHHHHHHHHT
T ss_pred             CCHhHCcCHHHH--HHHHHHHHHc
Confidence            999999999999  9999877653

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.8e-32  Score=234.43  Aligned_cols=133  Identities=19%  Similarity=0.192  Sum_probs=108.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------------CCccccCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------------TPGYAAPETWMS   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------------t~~y~aPE~~~~   52 (291)
                      ++|+.|||.||+|||+   ++||||||||+||||+.++.                             |+.|||||.+.+
T Consensus       131 ~~i~~qia~gl~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  207 (299)
T d1jpaa_         131 VGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY  207 (299)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----------------------CGGGSCHHHHHS
T ss_pred             HHHHHHHHHHHHHHhh---CCCccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhc
Confidence            5789999999999999   99999999999999997754                             567999999999


Q ss_pred             CCCccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcc
Q 022858           53 FPVTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRV  131 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  131 (291)
                      ..++.++|||||||++|||+| |+.||......        .+...+..+.         ..+.+.+++..+.+|+.+||
T Consensus       208 ~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~--------~~~~~i~~~~---------~~~~~~~~~~~l~~li~~cl  270 (299)
T d1jpaa_         208 RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--------DVINAIEQDY---------RLPPPMDCPSALHQLMLDCW  270 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCCcccccccchHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCC---------CCCCCccchHHHHHHHHHHc
Confidence            999999999999999999998 89998654321        1222222221         12223345678899999999


Q ss_pred             ccCCCCCCCCCccchhhhhhccccc
Q 022858          132 QYKPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       132 ~~~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      +.||++||||.||  ++.|+.+.+.
T Consensus       271 ~~~P~~RPs~~ei--~~~L~~~l~~  293 (299)
T d1jpaa_         271 QKDRNHRPKFGQI--VNTLDKMIRN  293 (299)
T ss_dssp             CSSTTTSCCHHHH--HHHHHHHHHS
T ss_pred             CCCHhHCcCHHHH--HHHHHHHhcC
Confidence            9999999999999  9999887654

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.7e-32  Score=229.76  Aligned_cols=135  Identities=18%  Similarity=0.192  Sum_probs=107.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      ++|+.|||.||+|||+   ++|+||||||+|||++.++.                           |+.|||||++.+..
T Consensus       113 ~~i~~~i~~gl~~lH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~  189 (283)
T d1mqba_         113 VGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK  189 (283)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCC
T ss_pred             HHHHHHHHHhhhhccc---cccccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCC
Confidence            5799999999999999   99999999999999997753                           66799999999999


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++|||||||++|||+++..|+.....       ...+...+..+         ...+.+..++..+.+|+.+||+.|
T Consensus       190 ~~~~sDI~S~Gvil~el~t~~~~~~~~~~-------~~~~~~~i~~~---------~~~~~~~~~~~~l~~li~~cl~~~  253 (283)
T d1mqba_         190 FTSASDVWSFGIVMWEVMTYGERPYWELS-------NHEVMKAINDG---------FRLPTPMDCPSAIYQLMMQCWQQE  253 (283)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCTTTTCC-------HHHHHHHHHTT---------CCCCCCTTCBHHHHHHHHHHTCSS
T ss_pred             CCCcccccccHHHHHHHHhCCCCccccCC-------HHHHHHHHhcc---------CCCCCchhhHHHHHHHHHHHCcCC
Confidence            99999999999999999997666543221       11122222222         122233345578899999999999


Q ss_pred             CCCCCCCCccchhhhhhcccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLASM  157 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~~  157 (291)
                      |++||+|.||  ++.|+.+.+.+
T Consensus       254 p~~RPt~~ei--l~~L~~l~~~p  274 (283)
T d1mqba_         254 RARRPKFADI--VSILDKLIRAP  274 (283)
T ss_dssp             TTTSCCHHHH--HHHHHHHHHSG
T ss_pred             HhHCcCHHHH--HHHHHHHhhCc
Confidence            9999999999  99998876643

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.6e-32  Score=228.61  Aligned_cols=132  Identities=18%  Similarity=0.230  Sum_probs=103.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      ++|+.|||.||+|||+   ++|+||||||+|||++.++.                         |+.|||||.+.+..++
T Consensus       104 ~~i~~qia~gl~~lH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  180 (263)
T d1sm2a_         104 LGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS  180 (263)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCTTCSGGGEEECGGGCEEECSCC------------------CTTSCCHHHHTTCCCC
T ss_pred             HHHHHHHHHHHHhhhc---cceeecccchhheeecCCCCeEecccchheeccCCCceeecceecCcccCChHHhcCCCCC
Confidence            5799999999999999   99999999999999997653                         6789999999999999


Q ss_pred             cccceechhHHHHHHhhC-CCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILGR-RRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++|||||||++|||+|+ .+|+.....        ..+...+..+.         ....+..++..+.+++.+||+.||
T Consensus       181 ~k~DVwS~Gvil~el~t~~~~~~~~~~~--------~~~~~~i~~~~---------~~~~p~~~~~~l~~li~~cl~~~p  243 (263)
T d1sm2a_         181 SKSDVWSFGVLMWEVFSEGKIPYENRSN--------SEVVEDISTGF---------RLYKPRLASTHVYQIMNHCWKERP  243 (263)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTCSCCH--------HHHHHHHHHTC---------CCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             chhhhcchHHHHHHHHHCCCCCCCCCCH--------HHHHHHHHhcC---------CCCCccccCHHHHHHHHHHccCCH
Confidence            999999999999999995 444432221        11222222221         111223345678999999999999


Q ss_pred             CCCCCCCccchhhhhhcccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ++||||+||  ++.|+++.+
T Consensus       244 ~~Rps~~~i--l~~L~~i~e  261 (263)
T d1sm2a_         244 EDRPAFSRL--LRQLAEIAE  261 (263)
T ss_dssp             GGSCCHHHH--HHHHHHHHH
T ss_pred             hHCcCHHHH--HHHHHHHHh
Confidence            999999999  999987754

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.5e-32  Score=229.57  Aligned_cols=130  Identities=22%  Similarity=0.277  Sum_probs=105.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      ++|+.|||.||+|||+   ++||||||||+|||++.++.                           |+.|||||.+.+..
T Consensus       110 ~~i~~qi~~gl~ylH~---~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  186 (277)
T d1xbba_         110 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK  186 (277)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHhhHHh---CCcccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCC
Confidence            5789999999999999   99999999999999986543                           67899999999999


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++|||||||++|||+| |+.||......        .+...+..+..         .+.+..++..+.+|+.+||+.
T Consensus       187 ~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~--------~~~~~i~~~~~---------~~~p~~~~~~~~~li~~cl~~  249 (277)
T d1xbba_         187 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------EVTAMLEKGER---------MGCPAGCPREMYDLMNLCWTY  249 (277)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCC---------CCCCTTCCHHHHHHHHHHTCS
T ss_pred             CCchhhhccchhhhhHHhhCCCCCCCCCCHH--------HHHHHHHcCCC---------CCCCcccCHHHHHHHHHHcCC
Confidence            9999999999999999997 89998754321        22233333221         122234457788999999999


Q ss_pred             CCCCCCCCCccchhhhhhcc
Q 022858          134 KPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~  153 (291)
                      ||++|||+++|  +..|+..
T Consensus       250 dp~~RPs~~~i--~~~L~~~  267 (277)
T d1xbba_         250 DVENRPGFAAV--ELRLRNY  267 (277)
T ss_dssp             STTTSCCHHHH--HHHHHHH
T ss_pred             CHhHCcCHHHH--HHHhhCH
Confidence            99999999999  8887654

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.4e-32  Score=233.04  Aligned_cols=129  Identities=20%  Similarity=0.211  Sum_probs=103.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.||+.||+|||+   ++||||||||+|||++.++.                          |+.|||||++.+..+
T Consensus       167 ~~i~~qi~~gl~yLH~---~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~  243 (325)
T d1rjba_         167 LCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIY  243 (325)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCC
Confidence            4689999999999999   99999999999999987643                          778999999999999


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||+| |+.||......       ..+...+..+.         ..+.+..++..+.+|+.+||+.|
T Consensus       244 ~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~-------~~~~~~~~~~~---------~~~~p~~~~~~l~~li~~cl~~d  307 (325)
T d1rjba_         244 TIKSDVWSYGILLWEIFSLGVNPYPGIPVD-------ANFYKLIQNGF---------KMDQPFYATEEIYIIMQSCWAFD  307 (325)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-------HHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             CcceeccchhHHHHHHHhCCCCCCCCCCHH-------HHHHHHHhcCC---------CCCCCCcCCHHHHHHHHHHcCCC
Confidence            999999999999999997 89998754422       11222222211         11223344577899999999999


Q ss_pred             CCCCCCCCccchhhhhh
Q 022858          135 PEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~  151 (291)
                      |++|||+.||  ++.|.
T Consensus       308 P~~RPt~~ei--~~~L~  322 (325)
T d1rjba_         308 SRKRPSFPNL--TSFLG  322 (325)
T ss_dssp             GGGSCCHHHH--HHHHH
T ss_pred             hhHCcCHHHH--HHHHh
Confidence            9999999999  98885

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.3e-31  Score=231.11  Aligned_cols=133  Identities=17%  Similarity=0.200  Sum_probs=107.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++|+.|||.||+|||+   ++||||||||+|||++.++.                          |+.|||||.+.++.+
T Consensus       114 ~~i~~qi~~gl~yLH~---~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~  190 (317)
T d1xkka_         114 LNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY  190 (317)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHH---cCcccCcchhhcceeCCCCCeEeeccccceecccccccccccccccCccccChHHHhcCCC
Confidence            5789999999999999   99999999999999987643                          789999999999999


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||+| |..||......        .+...+..+.         ..+.+..++..+.+++.+||+.|
T Consensus       191 ~~~sDvwS~Gvil~el~t~g~~p~~~~~~~--------~~~~~i~~~~---------~~~~p~~~~~~~~~li~~cl~~d  253 (317)
T d1xkka_         191 THQSDVWSYGVTVWELMTFGSKPYDGIPAS--------EISSILEKGE---------RLPQPPICTIDVYMIMVKCWMID  253 (317)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTSCGG--------GHHHHHHHTC---------CCCCCTTBCHHHHHHHHHHTCSS
T ss_pred             ChhhhhhhHHHHHHHHHHCCCCCCCCCCHH--------HHHHHHHcCC---------CCCCCcccCHHHHHHHHHhCCCC
Confidence            999999999999999998 78887654322        1222222221         12223345577899999999999


Q ss_pred             CCCCCCCCccchhhhhhccccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      |++|||+.||  +..|+.....
T Consensus       254 P~~RPs~~ei--l~~l~~~~~~  273 (317)
T d1xkka_         254 ADSRPKFREL--IIEFSKMARD  273 (317)
T ss_dssp             GGGSCCHHHH--HHHHHHHHHS
T ss_pred             hhhCcCHHHH--HHHHHHHHhC
Confidence            9999999999  9888776543

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.1e-31  Score=227.86  Aligned_cols=131  Identities=18%  Similarity=0.213  Sum_probs=106.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      ++|+.|||.||+|||+   ++|+||||||+|||++.++.                           |+.|||||++.+..
T Consensus       112 ~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  188 (285)
T d1u59a_         112 AELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK  188 (285)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHh---CCeecCcCchhheeeccCCceeeccchhhhcccccccccccccccccCccccChHHHhCCC
Confidence            5789999999999999   99999999999999986643                           67899999999899


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++|||||||++|||+| |+.||......        .+...+..+...         +.+..++..+.+|+.+||+.
T Consensus       189 ~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~--------~~~~~i~~~~~~---------~~p~~~~~~l~~li~~cl~~  251 (285)
T d1u59a_         189 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EVMAFIEQGKRM---------ECPPECPPELYALMSDCWIY  251 (285)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--------HHHHHHHTTCCC---------CCCTTCCHHHHHHHHHTTCS
T ss_pred             CCccchhhcchHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCC---------CCCCcCCHHHHHHHHHHcCC
Confidence            9999999999999999998 89999754321        122333333221         22334557788999999999


Q ss_pred             CCCCCCCCCccchhhhhhccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~  154 (291)
                      ||++||||.+|  ++.|+...
T Consensus       252 ~p~~RPs~~~i--~~~L~~~~  270 (285)
T d1u59a_         252 KWEDRPDFLTV--EQRMRACY  270 (285)
T ss_dssp             SGGGSCCHHHH--HHHHHHHH
T ss_pred             CHhHCcCHHHH--HHHHHHHH
Confidence            99999999999  88887654

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.8e-31  Score=225.36  Aligned_cols=131  Identities=25%  Similarity=0.276  Sum_probs=102.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      ++|+.|||.||+|||+   ++|+||||||+||||+.++.                         |+.|||||++.++.++
T Consensus       112 ~~i~~qi~~gl~~lH~---~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~  188 (272)
T d1qpca_         112 LDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT  188 (272)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEEC
T ss_pred             HHHHHHHHHHHHHHHh---CCcccCccchhheeeecccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCC
Confidence            6799999999999999   99999999999999997754                         6789999999988999


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++|||||||++|||+||..|+.....       ...+...+..+..         ...+..++..+.+++.+||+.||+
T Consensus       189 ~~sDvwS~Gvvl~ellt~~~~~~~~~~-------~~~~~~~i~~~~~---------~~~p~~~~~~l~~li~~cl~~~P~  252 (272)
T d1qpca_         189 IKSDVWSFGILLTEIVTHGRIPYPGMT-------NPEVIQNLERGYR---------MVRPDNCPEELYQLMRLCWKERPE  252 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCSSTTCC-------HHHHHHHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             chhhhhhhHHHHHHHHhCCCCCCCCCC-------HHHHHHHHHhcCC---------CCCcccChHHHHHHHHHHcCCCHh
Confidence            999999999999999996655433221       1112222222211         112223456788999999999999


Q ss_pred             CCCCCCccchhhhhhcc
Q 022858          137 AMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       137 ~RPs~~~v~~~~~L~~~  153 (291)
                      +||||.+|  ++.|+..
T Consensus       253 ~Rpt~~ei--~~~L~~~  267 (272)
T d1qpca_         253 DRPTFDYL--RSVLEDF  267 (272)
T ss_dssp             GSCCHHHH--HHHHHHH
T ss_pred             HCcCHHHH--HHHhhhh
Confidence            99999999  9888764

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.8e-31  Score=228.39  Aligned_cols=133  Identities=25%  Similarity=0.239  Sum_probs=105.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|||.||+|||+   ++||||||||+|||++.++.                          |+.|||||.+.+..+
T Consensus       137 ~~~~~qi~~gl~ylH~---~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~  213 (299)
T d1ywna1         137 ICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY  213 (299)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCC
Confidence            5689999999999999   99999999999999986543                          678999999999999


Q ss_pred             ccccceechhHHHHHHhhCC-CccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILGRR-RMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||+||. .||.....       ...+...+..+...         ..+..++..+.+++.+||+.|
T Consensus       214 ~~~sDiwS~Gvil~ellt~~~~p~~~~~~-------~~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~d  277 (299)
T d1ywna1         214 TIQSDVWSFGVLLWEIFSLGASPYPGVKI-------DEEFCRRLKEGTRM---------RAPDYTTPEMYQTMLDCWHGE  277 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCC-------SHHHHHHHHHTCCC---------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             CcccceeehHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHhcCCCC---------CCCccCCHHHHHHHHHHcCCC
Confidence            99999999999999999875 56654332       12233333332221         122233467889999999999


Q ss_pred             CCCCCCCCccchhhhhhcccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      |++|||+.|+  ++.|+.+.+
T Consensus       278 P~~Rpt~~ei--l~~L~~ilq  296 (299)
T d1ywna1         278 PSQRPTFSEL--VEHLGNLLQ  296 (299)
T ss_dssp             GGGSCCHHHH--HHHHHHHHH
T ss_pred             hhHCcCHHHH--HHHHHHHHh
Confidence            9999999999  999987754

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.1e-31  Score=227.96  Aligned_cols=132  Identities=22%  Similarity=0.240  Sum_probs=107.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.++.|||.||+|||+   .+||||||||+|||++.++.                          ++.|+|||.+.++.+
T Consensus       138 ~~~~~qi~~al~ylH~---~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y  214 (299)
T d1fgka_         138 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY  214 (299)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHhhh---CCEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCC
Confidence            5789999999999999   99999999999999987754                          678999999999999


Q ss_pred             ccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||++ |..||.....        ..+...+..+...         +.+...+..+.+|+.+||+.|
T Consensus       215 ~~k~DiwS~Gvvl~ell~~g~~p~~~~~~--------~~~~~~i~~~~~~---------~~p~~~~~~l~~li~~cl~~d  277 (299)
T d1fgka_         215 THQSDVWSFGVLLWEIFTLGGSPYPGVPV--------EELFKLLKEGHRM---------DKPSNCTNELYMMMRDCWHAV  277 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHHHHHTTCCC---------CCCSSCCHHHHHHHHHHTCSS
T ss_pred             CchhhhHHhHHHHHHhccCCCCCCCCCCH--------HHHHHHHHcCCCC---------CCCccchHHHHHHHHHHccCC
Confidence            999999999999999998 6888764432        2233333332211         222234467899999999999


Q ss_pred             CCCCCCCCccchhhhhhcccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      |++|||+.||  ++.|+++..
T Consensus       278 P~~Rps~~ei--l~~L~~i~a  296 (299)
T d1fgka_         278 PSQRPTFKQL--VEDLDRIVA  296 (299)
T ss_dssp             GGGSCCHHHH--HHHHHHHHH
T ss_pred             HhHCcCHHHH--HHHHHHHhh
Confidence            9999999999  999988754

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=2.4e-31  Score=226.16  Aligned_cols=133  Identities=20%  Similarity=0.219  Sum_probs=104.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      ++|+.|||.||+|||+   ++||||||||+|||++.++.                         ++.|||||++.+..++
T Consensus       118 ~~i~~qi~~gL~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~  194 (287)
T d1opja_         118 LYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS  194 (287)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCS
T ss_pred             HHHHHHHHHHHHHHHH---CCcccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCC
Confidence            5789999999999999   99999999999999987643                         6789999999999999


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++|||||||++|||++|..|+.....       ...+...+..+         ...+.+..++..+.+|+.+||+.||+
T Consensus       195 ~k~DiwS~Gv~l~ell~~~~p~~~~~~-------~~~~~~~i~~~---------~~~~~~~~~~~~l~~li~~cl~~dP~  258 (287)
T d1opja_         195 IKSDVWAFGVLLWEIATYGMSPYPGID-------LSQVYELLEKD---------YRMERPEGCPEKVYELMRACWQWNPS  258 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSSTTCC-------HHHHHHHHHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             chhhhhhHHHHHHHHHhCCCCCCCcch-------HHHHHHHHhcC---------CCCCCCccchHHHHHHHHHHcCCCHh
Confidence            999999999999999997776543321       11122222222         11222334457789999999999999


Q ss_pred             CCCCCCccchhhhhhcccc
Q 022858          137 AMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       137 ~RPs~~~v~~~~~L~~~~~  155 (291)
                      +|||+.||  ++.|+....
T Consensus       259 ~Rps~~ei--~~~L~~~~~  275 (287)
T d1opja_         259 DRPSFAEI--HQAFETMFQ  275 (287)
T ss_dssp             GSCCHHHH--HHHHHHTTS
T ss_pred             HCcCHHHH--HHHHHHHHH
Confidence            99999999  998877643

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.9e-31  Score=222.12  Aligned_cols=126  Identities=22%  Similarity=0.287  Sum_probs=94.1

Q ss_pred             hhHHHHHHHHHHHHhcCC--CCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGC--QQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~--~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|++.||+|||+..  ..+||||||||+|||++.++.                        |+.|||||++.+..+
T Consensus       112 ~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~  191 (269)
T d2java1         112 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSY  191 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-----------CCCSCCCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCC
Confidence            578999999999999821  135999999999999997754                        889999999999999


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++|||||||++|||+||+.||.....        ..+...+..+....         .+...+..+.+++.+||+.||
T Consensus       192 ~~~~DIwSlGvilyel~tg~~Pf~~~~~--------~~~~~~i~~~~~~~---------~~~~~s~~l~~li~~~L~~dp  254 (269)
T d2java1         192 NEKSDIWSLGCLLYELCALMPPFTAFSQ--------KELAGKIREGKFRR---------IPYRYSDELNEIITRMLNLKD  254 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTCCCC---------CCTTSCHHHHHHHHHHTCSSG
T ss_pred             ChHHHHHhhCHHHHHHhhCCCCCCCCCH--------HHHHHHHHcCCCCC---------CCcccCHHHHHHHHHHcCCCh
Confidence            9999999999999999999999965432        12223333332221         122334678899999999999


Q ss_pred             CCCCCCCcc
Q 022858          136 EAMPSMTVR  144 (291)
Q Consensus       136 ~~RPs~~~v  144 (291)
                      ++|||+.|+
T Consensus       255 ~~Rps~~el  263 (269)
T d2java1         255 YHRPSVEEI  263 (269)
T ss_dssp             GGSCCHHHH
T ss_pred             hHCcCHHHH
Confidence            999999988

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=3.7e-31  Score=226.68  Aligned_cols=131  Identities=18%  Similarity=0.194  Sum_probs=105.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      +.|+.|+|.||+|||+   ++||||||||+|||++.++.                          ++.|+|||.+.+..+
T Consensus       143 ~~i~~qi~~gl~ylH~---~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  219 (301)
T d1lufa_         143 LCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRY  219 (301)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHhhhccc---CCeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCC
Confidence            5789999999999999   99999999999999997653                          678999999999999


Q ss_pred             ccccceechhHHHHHHhhCC-CccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILGRR-RMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||++|. +||......        .+...+..+...         +.+..++..+.+|+.+||+.+
T Consensus       220 t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~--------e~~~~v~~~~~~---------~~p~~~~~~~~~li~~cl~~~  282 (301)
T d1lufa_         220 TTESDVWAYGVVLWEIFSYGLQPYYGMAHE--------EVIYYVRDGNIL---------ACPENCPLELYNLMRLCWSKL  282 (301)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             ChhhhhccchhhHHHHHccCCCCCCCCCHH--------HHHHHHHcCCCC---------CCCccchHHHHHHHHHHcCCC
Confidence            99999999999999999986 566544321        122233333222         222334567899999999999


Q ss_pred             CCCCCCCCccchhhhhhccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~  154 (291)
                      |++||||.||  +++|+++.
T Consensus       283 P~~RPt~~ev--~~~L~~i~  300 (301)
T d1lufa_         283 PADRPSFCSI--HRILQRMC  300 (301)
T ss_dssp             GGGSCCHHHH--HHHHHHTT
T ss_pred             hhHCcCHHHH--HHHHHHhc
Confidence            9999999999  99998764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.3e-31  Score=219.74  Aligned_cols=129  Identities=16%  Similarity=0.186  Sum_probs=104.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      ++|+.|+|+||+|||+   ++|+||||||+|||++.++.                         |+.|+|||.+.+..++
T Consensus       103 ~~i~~qi~~gl~~LH~---~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  179 (258)
T d1k2pa_         103 LEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS  179 (258)
T ss_dssp             HHHHHHHHHHHHHHHH---TTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHhh---cCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCC
Confidence            5789999999999999   99999999999999997643                         6779999999999999


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++|||||||++|||+| |+.||......        .+...+..+..         ...+..++..+.+++.+||+.||
T Consensus       180 ~ksDiwS~G~~l~el~t~g~~Pf~~~~~~--------~~~~~i~~~~~---------~~~p~~~~~~l~~li~~cl~~dP  242 (258)
T d1k2pa_         180 SKSDIWAFGVLMWEIYSLGKMPYERFTNS--------ETAEHIAQGLR---------LYRPHLASEKVYTIMYSCWHEKA  242 (258)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTSCHH--------HHHHHHHTTCC---------CCCCTTCCHHHHHHHHHTTCSSG
T ss_pred             cceeecccchhhHhHHhcCCCCCCCCCHH--------HHHHHHHhCCC---------CCCcccccHHHHHHHHHHccCCH
Confidence            99999999999999998 78898655422        22233332211         12223344678999999999999


Q ss_pred             CCCCCCCccchhhhhhc
Q 022858          136 EAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~  152 (291)
                      ++|||+.++  ++.|..
T Consensus       243 ~~RPt~~ei--l~~L~d  257 (258)
T d1k2pa_         243 DERPTFKIL--LSNILD  257 (258)
T ss_dssp             GGSCCHHHH--HHHHHC
T ss_pred             hHCcCHHHH--HHHhhC
Confidence            999999999  888754

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.9e-31  Score=219.95  Aligned_cols=132  Identities=20%  Similarity=0.202  Sum_probs=106.1

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCcccc
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      +++|+.|||.||+|||+   .+|+||||||+|||++.++.                     ++.|+|||++.+..++.++
T Consensus       105 ~~~i~~~i~~al~ylH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~~~t~~s  181 (262)
T d1byga_         105 LLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKS  181 (262)
T ss_dssp             HHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHhhcccccc---CceeccccchHhheecCCCCEeecccccceecCCCCccccccccCCChHHHhCCCCChHH
Confidence            36799999999999999   99999999999999997764                     7789999999999999999


Q ss_pred             ceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           60 DVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        60 Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      |||||||++|||+| |+.|+......        .+...+..+...         +.+...+..+.+++.+||+.||++|
T Consensus       182 DIwSfG~il~el~t~~~~p~~~~~~~--------~~~~~i~~~~~~---------~~~~~~~~~~~~li~~cl~~dP~~R  244 (262)
T d1byga_         182 DVWSFGILLWEIYSFGRVPYPRIPLK--------DVVPRVEKGYKM---------DAPDGCPPAVYEVMKNCWHLDAAMR  244 (262)
T ss_dssp             HHHHHHHHHHHHHTTSCCSCTTSCGG--------GHHHHHTTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHhHHHHHHHHHHCCCCCCCCCCHH--------HHHHHHHcCCCC---------CCCccCCHHHHHHHHHHcccCHhHC
Confidence            99999999999998 67776544322        122222222211         2223344678899999999999999


Q ss_pred             CCCCccchhhhhhccc
Q 022858          139 PSMTVRPAKFMLHGSL  154 (291)
Q Consensus       139 Ps~~~v~~~~~L~~~~  154 (291)
                      |||.++  +++|+++.
T Consensus       245 ps~~~l--~~~L~~i~  258 (262)
T d1byga_         245 PSFLQL--REQLEHIK  258 (262)
T ss_dssp             CCHHHH--HHHHHHHH
T ss_pred             cCHHHH--HHHHHHHH
Confidence            999999  99998764

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8.1e-31  Score=221.47  Aligned_cols=132  Identities=22%  Similarity=0.216  Sum_probs=106.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      +.++.||+.||+|||+   ++||||||||+||+++.++.                         |+.|+|||.+.+..++
T Consensus       111 ~~~~~qi~~gl~ylH~---~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~  187 (273)
T d1mp8a_         111 ILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT  187 (273)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCS
T ss_pred             HHHHHHHHHHhhhhcc---cCeeccccchhheeecCCCcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCC
Confidence            5789999999999999   99999999999999987643                         7789999999999999


Q ss_pred             cccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           57 HKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        57 ~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      .++|||||||++|||++ |.+||......        .+...+..+...         +.+..++..+.+|+.+||+.||
T Consensus       188 ~~~DiwSlGvil~e~lt~g~~P~~~~~~~--------~~~~~i~~~~~~---------~~~~~~~~~~~~li~~cl~~dp  250 (273)
T d1mp8a_         188 SASDVWMFGVCMWEILMHGVKPFQGVKNN--------DVIGRIENGERL---------PMPPNCPPTLYSLMTKCWAYDP  250 (273)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------GHHHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSG
T ss_pred             CccccccchHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCCH
Confidence            99999999999999997 88888765432        122222222211         2233445788999999999999


Q ss_pred             CCCCCCCccchhhhhhcccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ++|||+.||  ++.|+.+.+
T Consensus       251 ~~Rps~~ei--~~~L~~i~~  268 (273)
T d1mp8a_         251 SRRPRFTEL--KAQLSTILE  268 (273)
T ss_dssp             GGSCCHHHH--HHHHHHHHH
T ss_pred             hHCcCHHHH--HHHHHHHHH
Confidence            999999999  988877643

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.7e-30  Score=218.08  Aligned_cols=122  Identities=23%  Similarity=0.257  Sum_probs=99.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      ..|+.||+.||+|||+   ++||||||||+|||++.++.                      |+.|||||++.+..++.++
T Consensus       109 ~~i~~qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~  185 (263)
T d2j4za1         109 ATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV  185 (263)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTH
T ss_pred             HHHHHHHHHHHHHHHH---CCeeeeeeccccceecCCCCEeecccceeeecCCCcccccCCCCcccCHHHHcCCCCCchh
Confidence            4689999999999999   99999999999999987654                      8899999999999999999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP  139 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  139 (291)
                      |||||||++|||++|+.||.....        ......+.....          ..+...+..+.+++.+||+.||++||
T Consensus       186 DiwSlGvilyell~G~~Pf~~~~~--------~~~~~~i~~~~~----------~~p~~~s~~~~~li~~~L~~dp~~R~  247 (263)
T d2j4za1         186 DLWSLGVLCYEFLVGKPPFEANTY--------QETYKRISRVEF----------TFPDFVTEGARDLISRLLKHNPSQRP  247 (263)
T ss_dssp             HHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHTTCC----------CCCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             hhhhHhHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCC----------CCCccCCHHHHHHHHHHccCCHhHCc
Confidence            999999999999999999965432        122222222211          11122346778899999999999999


Q ss_pred             CCCcc
Q 022858          140 SMTVR  144 (291)
Q Consensus       140 s~~~v  144 (291)
                      |+.|+
T Consensus       248 t~~ei  252 (263)
T d2j4za1         248 MLREV  252 (263)
T ss_dssp             CHHHH
T ss_pred             CHHHH
Confidence            99999

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.7e-30  Score=216.80  Aligned_cols=125  Identities=24%  Similarity=0.177  Sum_probs=96.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ..|+.||+.||+|||+   ++|+||||||+|||++.++.                          |+.|||||++.+..+
T Consensus       106 ~~i~~qi~~al~ylH~---~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~  182 (271)
T d1nvra_         106 QRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF  182 (271)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSB
T ss_pred             HHHHHHHHHHHHHHHH---cCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCC
Confidence            4689999999999999   99999999999999987643                          789999999988776


Q ss_pred             -ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 -THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 -~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                       +.++||||+||++|||++|+.||......      .............         ..........+.+++.+||+.|
T Consensus       183 ~~~~~DiwSlGvilyeml~G~~pf~~~~~~------~~~~~~~~~~~~~---------~~~~~~~s~~~~~li~~~L~~d  247 (271)
T d1nvra_         183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDS------CQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVEN  247 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSCSSSSTT------SHHHHHHHTTCTT---------STTGGGSCHHHHHHHHHHSCSS
T ss_pred             CCCceeeeHhHHHHHHHHhCCCCCCCCChH------HHHHHHHhcCCCC---------CCccccCCHHHHHHHHHHcCCC
Confidence             57899999999999999999999754421      0111111111110         1111223456778999999999


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |++|||+.|+
T Consensus       248 P~~R~t~~ei  257 (271)
T d1nvra_         248 PSARITIPDI  257 (271)
T ss_dssp             TTTSCCHHHH
T ss_pred             hhHCcCHHHH
Confidence            9999999999

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.8e-30  Score=217.91  Aligned_cols=131  Identities=20%  Similarity=0.210  Sum_probs=101.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..|+.||+.||+|||+   ++||||||||+|||++.++.                        |+.|||||++.+..++.
T Consensus       119 ~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~  195 (293)
T d1yhwa1         119 AAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP  195 (293)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCT
T ss_pred             HHHHHHHHHHHHHHHH---CCCcccCCcHHHeEECCCCcEeeccchhheeeccccccccccccCCCccChhhhcCCCCCc
Confidence            4689999999999999   99999999999999987643                        88999999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||+||++|||++|+.||......       +........+. ..       ...+......+.+++.+||+.||++
T Consensus       196 ~~DiwSlGvilyemltG~~Pf~~~~~~-------~~~~~~~~~~~-~~-------~~~~~~~s~~~~~li~~~L~~dP~~  260 (293)
T d1yhwa1         196 KVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYLIATNGT-PE-------LQNPEKLSAIFRDFLNRCLDMDVEK  260 (293)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHHCS-CC-------CSSGGGSCHHHHHHHHHHTCSSTTT
T ss_pred             hhceehHhHHHHHHhhCCCCCCCCCHH-------HHHHHHHhCCC-CC-------CCCcccCCHHHHHHHHHHccCChhH
Confidence            999999999999999999999654321       11222221111 11       1112233467889999999999999


Q ss_pred             CCCCCccchhhhh
Q 022858          138 MPSMTVRPAKFML  150 (291)
Q Consensus       138 RPs~~~v~~~~~L  150 (291)
                      |||+.|++....+
T Consensus       261 R~s~~eil~Hp~~  273 (293)
T d1yhwa1         261 RGSAKELLQHQFL  273 (293)
T ss_dssp             SCCHHHHTTCGGG
T ss_pred             CcCHHHHhcCHhh
Confidence            9999999333344

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.2e-30  Score=220.25  Aligned_cols=131  Identities=21%  Similarity=0.283  Sum_probs=103.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      ++++.|||.||+|||+   ++|+||||||+|||++.++.                           ++.|+|||.+.+..
T Consensus       114 ~~~~~qi~~gl~ylH~---~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  190 (273)
T d1u46a_         114 SRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT  190 (273)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHhhh---CCEeeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCC
Confidence            5789999999999999   99999999999999987643                           56899999999999


Q ss_pred             CccccceechhHHHHHHhh-CCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           55 VTHKCDVRSFGMLLFEILG-RRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      ++.++|||||||++|||+| |+.||......       +........+..         .+.+...+..+.+++.+||+.
T Consensus       191 ~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~-------~~~~~i~~~~~~---------~~~~~~~~~~l~~li~~cl~~  254 (273)
T d1u46a_         191 FSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-------QILHKIDKEGER---------LPRPEDCPQDIYNVMVQCWAH  254 (273)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHHHHHTSCCC---------CCCCTTCCHHHHHHHHHHTCS
T ss_pred             CCcchhhhhhHHHHHHHHhCCCCCCCCcCHH-------HHHHHHHhCCCC---------CCCcccccHHHHHHHHHHcCC
Confidence            9999999999999999998 89998654322       111112222111         112223346788999999999


Q ss_pred             CCCCCCCCCccchhhhhhcc
Q 022858          134 KPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~  153 (291)
                      ||++||||.+|  ++.|.+.
T Consensus       255 dp~~RPt~~ei--~~~L~~~  272 (273)
T d1u46a_         255 KPEDRPTFVAL--RDFLLEA  272 (273)
T ss_dssp             SGGGSCCHHHH--HHHHHHH
T ss_pred             ChhHCcCHHHH--HHHHHhc
Confidence            99999999999  8888754

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.5e-30  Score=219.38  Aligned_cols=135  Identities=23%  Similarity=0.274  Sum_probs=106.4

Q ss_pred             ChhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCC
Q 022858            1 MHIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         1 ~l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++.|+.|||.||+|||+   ++|+||||||+|||++.++.                         |+.|+|||.+.++.+
T Consensus       115 ~~~i~~~i~~gl~~LH~---~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  191 (285)
T d1fmka3         115 LVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF  191 (285)
T ss_dssp             HHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHhh---hheecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccccccccChHHHhCCCC
Confidence            36799999999999999   99999999999999997653                         678999999999999


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++|||||||++|||++|..|+......       ..+...+..+.         ..+.+..++..+.+++.+||+.||
T Consensus       192 ~~ksDI~S~Giil~el~t~~~p~~~~~~~-------~~~~~~i~~~~---------~~~~~~~~~~~l~~li~~cl~~dP  255 (285)
T d1fmka3         192 TIKSDVWSFGILLTELTTKGRVPYPGMVN-------REVLDQVERGY---------RMPCPPECPESLHDLMCQCWRKEP  255 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHHHHTTC---------CCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             CcHHhhhcchHHHHHHHhCCCCCCCCCCH-------HHHHHHHHhcC---------CCCCCcccCHHHHHHHHHHcccCH
Confidence            99999999999999999976665433221       11222222221         112233445678999999999999


Q ss_pred             CCCCCCCccchhhhhhccccc
Q 022858          136 EAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       136 ~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ++||+|.+|  +++|+.....
T Consensus       256 ~~Rps~~~i--~~~L~~~~~~  274 (285)
T d1fmka3         256 EERPTFEYL--QAFLEDYFTS  274 (285)
T ss_dssp             GGSCCHHHH--HHHHHTTTSC
T ss_pred             hHCcCHHHH--HHHHhhhhcC
Confidence            999999999  9998886543

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=1.1e-29  Score=214.88  Aligned_cols=133  Identities=20%  Similarity=0.247  Sum_probs=101.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      +.|+.||+.||+|||+   .+||||||||+|||++.+..                           |+.|||||++.+..
T Consensus       114 ~~i~~qi~~al~~lH~---~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~  190 (277)
T d1o6ya_         114 IEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS  190 (277)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHh---CCccCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCC
Confidence            5789999999999999   99999999999999986543                           88999999999999


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||+||++|||+||+.||.....       .+..............       ......+..+.+++.+||+.|
T Consensus       191 ~~~~~DiwSlGvilyelltG~~Pf~~~~~-------~~~~~~~~~~~~~~~~-------~~~~~~s~~l~~li~~~L~~d  256 (277)
T d1o6ya_         191 VDARSDVYSLGCVLYEVLTGEPPFTGDSP-------VSVAYQHVREDPIPPS-------ARHEGLSADLDAVVLKALAKN  256 (277)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHCCCCCGG-------GTSSSCCHHHHHHHHHHTCSS
T ss_pred             CCcceecccchHHHHHHHhCCCCCCCcCH-------HHHHHHHHhcCCCCCc-------hhccCCCHHHHHHHHHHccCC
Confidence            99999999999999999999999975432       1222222222211111       111223467889999999999


Q ss_pred             CCCCC-CCCccchhhhhhcc
Q 022858          135 PEAMP-SMTVRPAKFMLHGS  153 (291)
Q Consensus       135 p~~RP-s~~~v~~~~~L~~~  153 (291)
                      |++|| |+.++  ++.|.++
T Consensus       257 p~~R~~sa~~l--~~~l~r~  274 (277)
T d1o6ya_         257 PENRYQTAAEM--RADLVRV  274 (277)
T ss_dssp             GGGSCSSHHHH--HHHHHHH
T ss_pred             HhHCHhHHHHH--HHHHHHH
Confidence            99999 67888  7777654

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4e-29  Score=210.42  Aligned_cols=124  Identities=19%  Similarity=0.233  Sum_probs=95.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCC--eEeecCCCCcEEEcc-CCC----------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQ--IIHYNIKPENILLDV-KFW----------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~--ivH~Dlkp~NIll~~-~~~----------------------t~~y~aPE~~~~~~~~   56 (291)
                      ..|+.||+.||+|||+   ++  |+||||||+|||++. ++.                      |+.|||||++.+ .++
T Consensus       115 ~~~~~qi~~gl~yLH~---~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~-~~~  190 (270)
T d1t4ha_         115 RSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYD  190 (270)
T ss_dssp             HHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCC
T ss_pred             HHHHHHHHHHHHHHHH---CCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccCCcccCccccCHHHhCC-CCC
Confidence            4689999999999999   66  999999999999974 332                      889999998865 699


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++|||||||++|||++|+.||.....       ...+...+..+......        +......+.+++.+||+.||+
T Consensus       191 ~~~DIwSlGvilyel~~g~~Pf~~~~~-------~~~~~~~i~~~~~~~~~--------~~~~~~~~~~li~~~l~~dp~  255 (270)
T d1t4ha_         191 ESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRRVTSGVKPASF--------DKVAIPEVKEIIEGCIRQNKD  255 (270)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHHHTTTCCCGGG--------GGCCCHHHHHHHHHHSCSSGG
T ss_pred             CcCchhhHHHHHHHHHHCCCCCCCccc-------HHHHHHHHHcCCCCccc--------CccCCHHHHHHHHHHccCCHh
Confidence            999999999999999999999964432       12233333332221111        112234678899999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +|||+.|+
T Consensus       256 ~R~s~~el  263 (270)
T d1t4ha_         256 ERYSIKDL  263 (270)
T ss_dssp             GSCCHHHH
T ss_pred             HCcCHHHH
Confidence            99999998

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4e-30  Score=221.12  Aligned_cols=133  Identities=18%  Similarity=0.224  Sum_probs=103.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++|+.|||.||+|||+   ++||||||||+|||++.++.                          |+.|+|||.+.+..+
T Consensus       148 ~~~~~qi~~gl~~LH~---~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  224 (311)
T d1t46a_         148 LSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY  224 (311)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHh---CCeeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCC
Confidence            5789999999999999   99999999999999986543                          788999999999999


Q ss_pred             ccccceechhHHHHHHhhC-CCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILGR-RRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++|||||||++|||+|+ .+|+......       ..+...+..+         .....+...+..+.+|+.+||+.|
T Consensus       225 ~~~~DIwS~G~~l~ellt~g~p~~~~~~~~-------~~~~~~i~~~---------~~~~~~~~~~~~l~~Li~~cl~~d  288 (311)
T d1t46a_         225 TFESDVWSYGIFLWELFSLGSSPYPGMPVD-------SKFYKMIKEG---------FRMLSPEHAPAEMYDIMKTCWDAD  288 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTCCSS-------HHHHHHHHHT---------CCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             CCcccccchHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHhcC---------CCCCCcccccHHHHHHHHHHcCCC
Confidence            9999999999999999985 5545433221       1122222221         111222334577899999999999


Q ss_pred             CCCCCCCCccchhhhhhcccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      |++||||.+|  +++|++...
T Consensus       289 P~~RPs~~~i--l~~L~~~i~  307 (311)
T d1t46a_         289 PLKRPTFKQI--VQLIEKQIS  307 (311)
T ss_dssp             GGGSCCHHHH--HHHHHHHHH
T ss_pred             hhHCcCHHHH--HHHHHHhhc
Confidence            9999999999  999987654

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2e-29  Score=214.21  Aligned_cols=125  Identities=25%  Similarity=0.264  Sum_probs=97.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCcccc-----C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWM-----S   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~-----~   52 (291)
                      ..|+.||+.||+|||+   ++|+||||||+|||++.++.                        |+.|||||++.     +
T Consensus       113 ~~i~~qi~~gL~ylH~---~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~  189 (288)
T d2jfla1         113 QVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD  189 (288)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTT
T ss_pred             HHHHHHHHHHHHHHHH---CCEEEeecChhheeECCCCCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCC
Confidence            4688999999999999   99999999999999987654                        88999999984     4


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++|||||||++|||++|+.||......       + +...+..+....+       ..+...+..+.+++.+||+
T Consensus       190 ~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~-------~-~~~~i~~~~~~~~-------~~~~~~s~~~~~li~~~L~  254 (288)
T d2jfla1         190 RPYDYKADVWSLGITLIEMAEIEPPHHELNPM-------R-VLLKIAKSEPPTL-------AQPSRWSSNFKDFLKKCLE  254 (288)
T ss_dssp             SSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGG-------G-HHHHHHHSCCCCC-------SSGGGSCHHHHHHHHHHSC
T ss_pred             CCCChhhhHHHHHHHHHHHhhCCCCCCCCCHH-------H-HHHHHHcCCCCCC-------CccccCCHHHHHHHHHHcc
Confidence            56889999999999999999999999765432       1 1112222211111       1122344678899999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .||++|||+.|+
T Consensus       255 ~dp~~R~t~~el  266 (288)
T d2jfla1         255 KNVDARWTTSQL  266 (288)
T ss_dssp             SSTTTSCCHHHH
T ss_pred             CChhHCcCHHHH
Confidence            999999999999

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.5e-30  Score=219.20  Aligned_cols=134  Identities=22%  Similarity=0.206  Sum_probs=104.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMSF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~~   53 (291)
                      ++++.|+|.||.|||+   ++|+||||||+|||++.++.                            |+.|+|||.+.+.
T Consensus       133 ~~i~~qia~gL~~lH~---~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  209 (311)
T d1r0pa_         133 IGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ  209 (311)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHC
T ss_pred             HHHHHHHHHhhhhhcc---cCcccCCccHHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHHHhcC
Confidence            6799999999999999   99999999999999987643                            5789999999999


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHcccc
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQY  133 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (291)
                      .++.++||||||+++|||+||..|+......   .....    .+..+..         ...+..++..+.+++.+||+.
T Consensus       210 ~~~~ksDI~SfGivl~El~t~~~p~~~~~~~---~~~~~----~i~~g~~---------~~~p~~~~~~l~~li~~cl~~  273 (311)
T d1r0pa_         210 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITV----YLLQGRR---------LLQPEYCPDPLYEVMLKCWHP  273 (311)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSCC---------CHH----HHHTTCC---------CCCCTTCCHHHHHHHHHHTCS
T ss_pred             CCCChhHhhhhHHHHHHHHHCCCCCCCCCCH---HHHHH----HHHcCCC---------CCCcccCcHHHHHHHHHHcCC
Confidence            9999999999999999999988877544321   11111    1222211         111223456788999999999


Q ss_pred             CCCCCCCCCccchhhhhhccccc
Q 022858          134 KPEAMPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       134 ~p~~RPs~~~v~~~~~L~~~~~~  156 (291)
                      ||++||+|.||  ++.|+++...
T Consensus       274 dP~~RPs~~ei--~~~L~~i~~~  294 (311)
T d1r0pa_         274 KAEMRPSFSEL--VSRISAIFST  294 (311)
T ss_dssp             SGGGSCCHHHH--HHHHHHHHHT
T ss_pred             CHhHCcCHHHH--HHHHHHHHHh
Confidence            99999999999  9999888654

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=6.8e-30  Score=219.14  Aligned_cols=124  Identities=25%  Similarity=0.305  Sum_probs=97.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------CCccccCccccC---CCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------TPGYAAPETWMS---FPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------t~~y~aPE~~~~---~~~~~~   58 (291)
                      ..|+.||+.||+|||+   ++||||||||+|||++.++.                    |+.|||||++.+   ..|+.+
T Consensus       118 ~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~GT~~Y~APE~~~~~~~~~y~~~  194 (309)
T d1u5ra_         118 AAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGK  194 (309)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHTTTTSCCBCTH
T ss_pred             HHHHHHHHHHHHHHHh---CCEeccCCCcceEEECCCCCEEEeecccccccCCCCccccCccccCHHHHhccCCCCcCch
Confidence            5789999999999999   99999999999999987643                    899999999864   468999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|||||||++|||++|..||......       +.... +..+.....        .....+..+.+++.+||+.||++|
T Consensus       195 ~DiwSlGvilyel~~g~~Pf~~~~~~-------~~~~~-i~~~~~~~~--------~~~~~s~~~~~li~~~L~~dP~~R  258 (309)
T d1u5ra_         195 VDVWSLGITCIELAERKPPLFNMNAM-------SALYH-IAQNESPAL--------QSGHWSEYFRNFVDSCLQKIPQDR  258 (309)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHH-HHHSCCCCC--------SCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             hhhhhHHHHHHHHHHCCCCCCCCCHH-------HHHHH-HHhCCCCCC--------CCCCCCHHHHHHHHHHCcCChhHC
Confidence            99999999999999999998654321       11111 111111111        112234678899999999999999


Q ss_pred             CCCCcc
Q 022858          139 PSMTVR  144 (291)
Q Consensus       139 Ps~~~v  144 (291)
                      ||+.|+
T Consensus       259 pt~~el  264 (309)
T d1u5ra_         259 PTSEVL  264 (309)
T ss_dssp             CCHHHH
T ss_pred             cCHHHH
Confidence            999999

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.6e-29  Score=217.18  Aligned_cols=133  Identities=23%  Similarity=0.219  Sum_probs=105.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ++++.|||.||.|||+   ++||||||||+|||++.++.                       |..|+|||.+.+..++.+
T Consensus       130 ~~~~~qia~gl~~lH~---~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~  206 (309)
T d1fvra_         130 LHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTN  206 (309)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHH
T ss_pred             HHHHHHHHHHHHhhhc---CCccccccccceEEEcCCCceEEccccccccccccccccceecCCcccchHHhccCCCCcc
Confidence            5789999999999999   99999999999999986533                       789999999999999999


Q ss_pred             cceechhHHHHHHhhCCC-ccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           59 CDVRSFGMLLFEILGRRR-MRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      +|||||||++|||++|.. ||.....        ..+...+..+..         .+.+..++..+.+|+.+||+.||++
T Consensus       207 sDvwSfGvil~ell~~~~~p~~~~~~--------~~~~~~i~~~~~---------~~~~~~~~~~~~~li~~cl~~dP~~  269 (309)
T d1fvra_         207 SDVWSYGVLLWEIVSLGGTPYCGMTC--------AELYEKLPQGYR---------LEKPLNCDDEVYDLMRQCWREKPYE  269 (309)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHGGGTCC---------CCCCTTBCHHHHHHHHHHTCSSGGG
T ss_pred             ceeehhHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHhcCC---------CCCCccCCHHHHHHHHHHcCCChhH
Confidence            999999999999999765 5543322        122222322211         1222334578899999999999999


Q ss_pred             CCCCCccchhhhhhccccc
Q 022858          138 MPSMTVRPAKFMLHGSLAS  156 (291)
Q Consensus       138 RPs~~~v~~~~~L~~~~~~  156 (291)
                      ||||.||  ++.|+.+.+.
T Consensus       270 RPs~~ei--l~~L~~i~~~  286 (309)
T d1fvra_         270 RPSFAQI--LVSLNRMLEE  286 (309)
T ss_dssp             SCCHHHH--HHHHHHHHHS
T ss_pred             CcCHHHH--HHHHHHHHhc
Confidence            9999999  9998887653

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.7e-29  Score=216.79  Aligned_cols=132  Identities=19%  Similarity=0.238  Sum_probs=106.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ++|+.|+|.||.|||+   ++|+||||||+|||++.++.                          |+.|+|||.+.+..+
T Consensus       136 ~~i~~~ia~gl~~LH~---~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~  212 (308)
T d1p4oa_         136 IQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVF  212 (308)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHhh---CCeeeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCC
Confidence            5789999999999999   99999999999999998764                          788999999999999


Q ss_pred             ccccceechhHHHHHHhhCC-CccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           56 THKCDVRSFGMLLFEILGRR-RMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      +.++||||||+++|||+||. .|+.....       .+ ....+..+...         +.+..++..+.+++.+||+.+
T Consensus       213 ~~~~Dv~S~G~il~El~t~~~~p~~~~~~-------~~-~~~~i~~~~~~---------~~p~~~~~~l~~li~~cl~~~  275 (308)
T d1p4oa_         213 TTYSDVWSFGVVLWEIATLAEQPYQGLSN-------EQ-VLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYN  275 (308)
T ss_dssp             CHHHHHHHHHHHHHHHHHTSCCTTTTSCH-------HH-HHHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             CcccccccHHHHHHHHHhCCCCCCCCCCH-------HH-HHHHHHhCCCC---------CCcccchHHHHHHHHHHcCCC
Confidence            99999999999999999985 55543322       11 22222222221         222334568999999999999


Q ss_pred             CCCCCCCCccchhhhhhcccc
Q 022858          135 PEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       135 p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      |++||||.+|  ++.|++..+
T Consensus       276 P~~RPs~~~i--l~~L~~~~~  294 (308)
T d1p4oa_         276 PKMRPSFLEI--ISSIKEEME  294 (308)
T ss_dssp             GGGSCCHHHH--HHHHGGGSC
T ss_pred             hhHCcCHHHH--HHHHHHhcC
Confidence            9999999999  999988755

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.2e-29  Score=211.52  Aligned_cols=122  Identities=17%  Similarity=0.248  Sum_probs=98.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ..++.|++.||+|||+   .+||||||||+|||++.++.                          |+.|||||++.+..+
T Consensus       111 ~~~~~qi~~al~ylH~---~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~  187 (288)
T d1uu3a_         111 RFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA  187 (288)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCC
T ss_pred             HHHHHHHHHHHHhhcc---ccEEcCcCCccccccCCCceEEecccccceecccCCcccccccccCCccccCceeeccCCC
Confidence            4688999999999999   99999999999999987643                          789999999999999


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||+||++|||++|+.||......        .+...+..+...          .+......+.+++.+||+.||
T Consensus       188 ~~~~DiwSlGvilyell~g~~Pf~~~~~~--------~~~~~i~~~~~~----------~p~~~s~~~~~li~~~L~~dP  249 (288)
T d1uu3a_         188 CKSSDLWALGCIIYQLVAGLPPFRAGNEY--------LIFQKIIKLEYD----------FPEKFFPKARDLVEKLLVLDA  249 (288)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHTTCCC----------CCTTCCHHHHHHHHTTSCSSG
T ss_pred             CcccceehhhHHHHHHhhCCCCCCCcCHH--------HHHHHHHcCCCC----------CCccCCHHHHHHHHHHccCCH
Confidence            99999999999999999999999754321        122222222210          111234567899999999999


Q ss_pred             CCCCCCCcc
Q 022858          136 EAMPSMTVR  144 (291)
Q Consensus       136 ~~RPs~~~v  144 (291)
                      ++|||+.|+
T Consensus       250 ~~R~t~~e~  258 (288)
T d1uu3a_         250 TKRLGCEEM  258 (288)
T ss_dssp             GGSTTSGGG
T ss_pred             hHCcCHHHH
Confidence            999999997

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.6e-29  Score=216.74  Aligned_cols=145  Identities=17%  Similarity=0.193  Sum_probs=102.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..|+.|++.||+|||+   ++||||||||+|||++.++.                       |+.|+|||++.+..++.+
T Consensus       119 ~~~~~qi~~aL~yLH~---~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~  195 (305)
T d1blxa_         119 KDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATP  195 (305)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTH
T ss_pred             HHHHHHHHHHHHHHHh---CCEEecCCCccEEEEcCCCCeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChh
Confidence            4689999999999999   99999999999999987643                       899999999999999999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC---c------cchhhh----hcccccchHHHHHHHHH
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG---E------FQDLII----VCGMEKNNKEKAERMAL  125 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~----~~~~~~~~~~~~~~~~~  125 (291)
                      +||||+||++|||++|+.||.......    ....+.......   .      ......    ..............+.+
T Consensus       196 ~DiwSlG~il~ell~g~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d  271 (305)
T d1blxa_         196 VDLWSVGCIFAEMFRRKPLFRGSSDVD----QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKD  271 (305)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHH
T ss_pred             ehhhchHHHHHHHHHCCCCCCCCCHHH----HHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHH
Confidence            999999999999999999997554221    111111110000   0      000000    00001111123356778


Q ss_pred             HHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          126 VALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      |+.+||+.||++|||+.|+.....++++
T Consensus       272 li~~mL~~dP~~R~sa~e~L~Hpff~~i  299 (305)
T d1blxa_         272 LLLKCLTFNPAKRISAYSALSHPYFQDL  299 (305)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             HHHHHCcCChhHCcCHHHHhcChhhcCc
Confidence            9999999999999999999333345443

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1e-28  Score=211.44  Aligned_cols=148  Identities=20%  Similarity=0.131  Sum_probs=107.8

Q ss_pred             hhHHHHHHHHHHHHhcCC-----CCCeEeecCCCCcEEEccCCC----------------------------CCccccCc
Q 022858            2 HIIAIGTAEGIVSLHDGC-----QQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPE   48 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~-----~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE   48 (291)
                      ++++.|+|.||+|||+.+     .++||||||||+|||++.++.                            |+.|||||
T Consensus       103 ~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE  182 (303)
T d1vjya_         103 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE  182 (303)
T ss_dssp             HHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChh
Confidence            578999999999999732     369999999999999987654                            78999999


Q ss_pred             cccCC------CCccccceechhHHHHHHhhCCCccccccccCCC-------CchhHHHHHHhhcCccchhhhhccc-cc
Q 022858           49 TWMSF------PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGF-------PSGFKWVWKKLEKGEFQDLIIVCGM-EK  114 (291)
Q Consensus        49 ~~~~~------~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-~~  114 (291)
                      ++.+.      .++.++|||||||++|||+||..|+.........       .................    +... ..
T Consensus       183 ~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~  258 (303)
T d1vjya_         183 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLR----PNIPNRW  258 (303)
T ss_dssp             HHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC----CCCCGGG
T ss_pred             hccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccC----CCCCccc
Confidence            98764      3678999999999999999999887543322110       01122222222222111    1111 11


Q ss_pred             chHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcccc
Q 022858          115 NNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGSLA  155 (291)
Q Consensus       115 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~~  155 (291)
                      ...+....+.+++.+||+.||++|||+.||  ++.|+++.+
T Consensus       259 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ei--~~~L~~i~~  297 (303)
T d1vjya_         259 QSCEALRVMAKIMRECWYANGAARLTALRI--KKTLSQLSQ  297 (303)
T ss_dssp             GGCHHHHHHHHHHHTTCCSSGGGSCCHHHH--HHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHcccCHhHCcCHHHH--HHHHHHHHH
Confidence            234566789999999999999999999999  999987754

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.6e-29  Score=214.88  Aligned_cols=79  Identities=25%  Similarity=0.385  Sum_probs=71.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccCCCCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMSFPVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~~~~~~~~   59 (291)
                      ..++.|++.||+|||+.  ++|+||||||+|||++.++.                      |+.|||||++.+..|+.++
T Consensus       107 ~~~~~qil~aL~yLH~~--~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~  184 (322)
T d1s9ja_         107 GKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS  184 (322)
T ss_dssp             HHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHCSCCCTTH
T ss_pred             HHHHHHHHHHHHHHHHh--CCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccccccCCccccCchHHcCCCCCcHH
Confidence            46889999999999971  48999999999999997754                      8999999999999999999


Q ss_pred             ceechhHHHHHHhhCCCcccccc
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQK   82 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~   82 (291)
                      ||||+||++|||++|+.||....
T Consensus       185 DiWSlGvil~ell~G~~Pf~~~~  207 (322)
T d1s9ja_         185 DIWSMGLSLVEMAVGRYPIPPPD  207 (322)
T ss_dssp             HHHHHHHHHHHHHHSSCCSSCCC
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCC
Confidence            99999999999999999997543

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.2e-28  Score=213.68  Aligned_cols=130  Identities=22%  Similarity=0.262  Sum_probs=98.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC--------------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW--------------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~--------------------------t~~y~aPE~~~~~~~   55 (291)
                      ..|+.||+.||+|||+   .+|+||||||+|||++.+..                          |+.|||||++.+..+
T Consensus       114 ~~i~~qi~~al~ylH~---~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y  190 (335)
T d2ozaa1         114 SEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKY  190 (335)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGG
T ss_pred             HHHHHHHHHHHHHHHH---cCCccccccccccccccccccccccccccceeeeccCCCccccccCCcccCCcHHHcCCCC
Confidence            4689999999999999   99999999999999985321                          899999999999899


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++||||+||++|||+||+.||.........    ..+...+..+...      ...+........+.+|+.+||+.||
T Consensus       191 ~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~----~~~~~~i~~~~~~------~~~~~~~~~s~~~~~li~~~L~~dP  260 (335)
T d2ozaa1         191 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----PGMKTRIRMGQYE------FPNPEWSEVSEEVKMLIRNLLKTEP  260 (335)
T ss_dssp             SHHHHHHHHHHHHHHHTTSSCSCEETTCC------------CCCSCSSS------CCTTHHHHSCHHHHHHHHHHSCSST
T ss_pred             CHHHHHHhhchhHHHHhhCCCCCCCCCHHHHH----HHHHHHHhcCCCC------CCCcccccCCHHHHHHHHHHccCCh
Confidence            99999999999999999999999766533111    1111111111110      0011123445778999999999999


Q ss_pred             CCCCCCCcc
Q 022858          136 EAMPSMTVR  144 (291)
Q Consensus       136 ~~RPs~~~v  144 (291)
                      ++|||+.|+
T Consensus       261 ~~R~s~~ei  269 (335)
T d2ozaa1         261 TQRMTITEF  269 (335)
T ss_dssp             TTSCCHHHH
T ss_pred             hHCcCHHHH
Confidence            999999999

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=1.7e-28  Score=209.73  Aligned_cols=138  Identities=19%  Similarity=0.202  Sum_probs=101.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccC----------CC------------------------CCccccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK----------FW------------------------TPGYAAP   47 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~----------~~------------------------t~~y~aP   47 (291)
                      +.++.|++.||+|||+   ++||||||||+|||++..          ++                        |+.||||
T Consensus       106 ~~~~~qi~~~l~~lH~---~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  182 (299)
T d1ckia_         106 LLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI  182 (299)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCH
T ss_pred             HHHHHHHHHHHHHHHH---CCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCH
Confidence            5789999999999999   999999999999997521          11                        7899999


Q ss_pred             ccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHH
Q 022858           48 ETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVA  127 (291)
Q Consensus        48 E~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  127 (291)
                      |.+.+..++.++|||||||++|||+||+.||...................... ..         ......++..+.+++
T Consensus       183 E~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~p~~~~~li  252 (299)
T d1ckia_         183 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PI---------EVLCKGYPSEFATYL  252 (299)
T ss_dssp             HHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHS-CH---------HHHTTTSCHHHHHHH
T ss_pred             HHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCC-Ch---------hHhccCCCHHHHHHH
Confidence            99999899999999999999999999999997665432222111111111100 00         001112346788999


Q ss_pred             HHccccCCCCCCCCCccchhhhhhccc
Q 022858          128 LWRVQYKPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       128 ~~cl~~~p~~RPs~~~v~~~~~L~~~~  154 (291)
                      ..|++.+|++||++.++  .+.|+...
T Consensus       253 ~~cl~~~p~~RP~~~~i--~~~l~~~~  277 (299)
T d1ckia_         253 NFCRSLRFDDKPDYSYL--RQLFRNLF  277 (299)
T ss_dssp             HHHHHSCTTCCCCHHHH--HHHHHHHH
T ss_pred             HHHccCChhHCcCHHHH--HHHHHHHH
Confidence            99999999999999988  77777653

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=3.5e-28  Score=208.28  Aligned_cols=126  Identities=21%  Similarity=0.271  Sum_probs=97.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEcc---CCC-----------------------CCccccCccccCCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDV---KFW-----------------------TPGYAAPETWMSFPV   55 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~---~~~-----------------------t~~y~aPE~~~~~~~   55 (291)
                      ..|+.||+.||+|||+   ++|+||||||+|||+..   ++.                       |+.|||||++.+..+
T Consensus       110 ~~~~~qi~~al~ylH~---~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~  186 (307)
T d1a06a_         110 SRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPY  186 (307)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCC------------------CTTSCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHhhhh---ceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCC
Confidence            4689999999999999   99999999999999953   221                       889999999999999


Q ss_pred             ccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCC
Q 022858           56 THKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKP  135 (291)
Q Consensus        56 ~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  135 (291)
                      +.++|||||||++|||++|+.||......        .....+..+....      ..+.....+..+.+++.+||+.||
T Consensus       187 ~~~~DiwSlGvilyell~g~~Pf~~~~~~--------~~~~~i~~~~~~~------~~~~~~~~s~~~~~li~~~L~~dP  252 (307)
T d1a06a_         187 SKAVDCWSIGVIAYILLCGYPPFYDENDA--------KLFEQILKAEYEF------DSPYWDDISDSAKDFIRHLMEKDP  252 (307)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHTTCCCC------CTTTTTTSCHHHHHHHHHHSCSSG
T ss_pred             CcHHHhhhhhHHHHHHHhCCCCCCCCCHH--------HHHHHHhccCCCC------CCccccCCCHHHHHHHHHHccCCH
Confidence            99999999999999999999999754321        1222222221110      011122334678899999999999


Q ss_pred             CCCCCCCcc
Q 022858          136 EAMPSMTVR  144 (291)
Q Consensus       136 ~~RPs~~~v  144 (291)
                      ++|||+.|+
T Consensus       253 ~~R~s~~ei  261 (307)
T d1a06a_         253 EKRFTCEQA  261 (307)
T ss_dssp             GGSCCHHHH
T ss_pred             hHCcCHHHH
Confidence            999999999

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.3e-28  Score=206.10  Aligned_cols=126  Identities=18%  Similarity=0.210  Sum_probs=98.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.++.                           |+.|+|||++.+..
T Consensus       116 ~~~~~qi~~al~yLH~---~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~  192 (293)
T d1jksa_         116 TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP  192 (293)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHhhhh---cceeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCC
Confidence            4689999999999999   99999999999999975542                           78899999999999


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++|||||||++|||++|+.||......        .....+........      .......+..+.+++.+||+.|
T Consensus       193 ~~~~~DiwSlGvilyell~g~~Pf~~~~~~--------~~~~~i~~~~~~~~------~~~~~~~s~~~~~li~~~L~~d  258 (293)
T d1jksa_         193 LGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANVSAVNYEFE------DEYFSNTSALAKDFIRRLLVKD  258 (293)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHTTCCCCC------HHHHTTSCHHHHHHHHTTSCSS
T ss_pred             CCCcccchhhhHHHHHHHcCCCCCCCCCHH--------HHHHHHHhcCCCCC------chhcCCCCHHHHHHHHHHccCC
Confidence            999999999999999999999999754321        12222222211100      0111223467789999999999


Q ss_pred             CCCCCCCCcc
Q 022858          135 PEAMPSMTVR  144 (291)
Q Consensus       135 p~~RPs~~~v  144 (291)
                      |++|||+.|+
T Consensus       259 P~~R~s~~ei  268 (293)
T d1jksa_         259 PKKRMTIQDS  268 (293)
T ss_dssp             GGGSCCHHHH
T ss_pred             hhHCcCHHHH
Confidence            9999999999

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.94  E-value=4.8e-28  Score=210.92  Aligned_cols=126  Identities=18%  Similarity=0.205  Sum_probs=97.8

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccC--CC-----------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK--FW-----------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~--~~-----------------------t~~y~aPE~~~~~~~~   56 (291)
                      ..|+.||+.||+|||+   .+||||||||+|||++.+  +.                       |+.|||||++.+..++
T Consensus       127 ~~i~~qi~~aL~ylH~---~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~  203 (350)
T d1koaa2         127 VEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG  203 (350)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBC
T ss_pred             HHHHHHHHHHHHHHHh---cCCeeeeechhHeeeccCCCCeEEEeecchheecccccccceecCcccccCHHHHcCCCCC
Confidence            4689999999999999   999999999999999643  11                       8999999999999999


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++||||+||++|||++|+.||......        .....+.......      ...........+.+++.+||+.||+
T Consensus       204 ~~~DiwSlGvilyell~G~~Pf~~~~~~--------~~~~~i~~~~~~~------~~~~~~~~s~~~~~li~~~L~~dP~  269 (350)
T d1koaa2         204 YYTDMWSVGVLSYILLSGLSPFGGENDD--------ETLRNVKSCDWNM------DDSAFSGISEDGKDFIRKLLLADPN  269 (350)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCS------CCGGGGGCCHHHHHHHHHHCCSSGG
T ss_pred             hhHhhhhhhHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCC------CcccccCCCHHHHHHHHHHccCChh
Confidence            9999999999999999999999754321        1222222211110      0111122345778899999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +|||+.|+
T Consensus       270 ~R~t~~ei  277 (350)
T d1koaa2         270 TRMTIHQA  277 (350)
T ss_dssp             GSCCHHHH
T ss_pred             HCcCHHHH
Confidence            99999999

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.6e-28  Score=207.20  Aligned_cols=124  Identities=19%  Similarity=0.275  Sum_probs=96.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCC-cc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPV-TH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~-~~   57 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.+..                       |+.|+|||++.+..+ +.
T Consensus       113 ~~~~~qi~~al~~lH~---~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~  189 (273)
T d1xwsa_         113 RSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR  189 (273)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHH
T ss_pred             HHHHHHHHHHHHHHHH---CCCccccCcccceEEecCCCeEEECccccceecccccccccccCCCcCCHHHHcCCCCCCc
Confidence            4688999999999999   99999999999999986532                       789999999987665 57


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||+||++|||++|+.||.....              +..+..          ..+...+..+.+++.+||+.||++
T Consensus       190 ~~DiwSlGvilyell~g~~Pf~~~~~--------------i~~~~~----------~~~~~~s~~~~~li~~~L~~dp~~  245 (273)
T d1xwsa_         190 SAAVWSLGILLYDMVCGDIPFEHDEE--------------IIRGQV----------FFRQRVSSECQHLIRWCLALRPSD  245 (273)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCSHHH--------------HHHCCC----------CCSSCCCHHHHHHHHHHTCSSGGG
T ss_pred             ccccccceeeehhHhhCCCCCCCchH--------------Hhhccc----------CCCCCCCHHHHHHHHHHccCCHhH
Confidence            78999999999999999999964321              111110          011122356788999999999999


Q ss_pred             CCCCCccchhhhhhc
Q 022858          138 MPSMTVRPAKFMLHG  152 (291)
Q Consensus       138 RPs~~~v~~~~~L~~  152 (291)
                      |||+.|+.....+++
T Consensus       246 R~s~~eil~hp~~~~  260 (273)
T d1xwsa_         246 RPTFEEIQNHPWMQD  260 (273)
T ss_dssp             SCCHHHHHTSGGGSS
T ss_pred             CcCHHHHhcCHhhCC
Confidence            999999933334544

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=7.5e-28  Score=209.78  Aligned_cols=130  Identities=18%  Similarity=0.188  Sum_probs=100.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCccccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      ..|+.||+.||+|||+   ++||||||||+|||++.++.                     |+.|||||++.+..++.++|
T Consensus       144 ~~i~~qi~~aL~yLH~---~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~D  220 (350)
T d1rdqe_         144 RFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVD  220 (350)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHHHHHHHh---CCEecCcCCHHHcccCCCCCEEeeeceeeeecccccccccCccccCCHHHHcCCCCCcccc
Confidence            4689999999999999   99999999999999987754                     88999999999999999999


Q ss_pred             eechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC-
Q 022858           61 VRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP-  139 (291)
Q Consensus        61 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-  139 (291)
                      ||||||++|||+||+.||......        .....+..+..          ..+......+.+++.+||+.||.+|+ 
T Consensus       221 iwSlGvilyemltG~~Pf~~~~~~--------~~~~~i~~~~~----------~~p~~~s~~~~~li~~~L~~dP~kR~~  282 (350)
T d1rdqe_         221 WWALGVLIYEMAAGYPPFFADQPI--------QIYEKIVSGKV----------RFPSHFSSDLKDLLRNLLQVDLTKRFG  282 (350)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC----------CCCTTCCHHHHHHHHHHSCSCTTTCTT
T ss_pred             ccchhHHHHHHHhCCCCCCCcCHH--------HHHHHHhcCCC----------CCCccCCHHHHHHHHHHhhhCHHhccc
Confidence            999999999999999999754321        12222222211          11122345788999999999999994 


Q ss_pred             ----CCCccchhhhhhc
Q 022858          140 ----SMTVRPAKFMLHG  152 (291)
Q Consensus       140 ----s~~~v~~~~~L~~  152 (291)
                          ++.+++....+..
T Consensus       283 ~~r~t~~ell~Hp~f~~  299 (350)
T d1rdqe_         283 NLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             SSTTTTHHHHTSGGGTT
T ss_pred             cccccHHHHHcCccccC
Confidence                7777733334433

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=8.1e-28  Score=207.17  Aligned_cols=130  Identities=22%  Similarity=0.237  Sum_probs=102.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   ++|+||||||+|||++.++.                        |+.|+|||++.+..++.
T Consensus       106 ~~~~~qi~~al~ylH~---~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  182 (320)
T d1xjda_         106 TFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNH  182 (320)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHHh---CCeeeccCcccceeecCCCceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCc
Confidence            4688999999999999   99999999999999987653                        78899999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||+||++|||++|+.||.+....        .+...+..+..          ..+...+..+.+|+.+||+.||++
T Consensus       183 ~~DiwSlGvilyemltG~~PF~~~~~~--------~~~~~i~~~~~----------~~p~~~s~~~~dli~~~L~~dP~~  244 (320)
T d1xjda_         183 SVDWWSFGVLLYEMLIGQSPFHGQDEE--------ELFHSIRMDNP----------FYPRWLEKEAKDLLVKLFVREPEK  244 (320)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC----------CCCTTSCHHHHHHHHHHSCSSGGG
T ss_pred             hhhhhhhhHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCC----------CCCccCCHHHHHHHHHhcccCCCC
Confidence            999999999999999999999765432        22222222211          111223466889999999999999


Q ss_pred             CCCCC-ccchhhhhhc
Q 022858          138 MPSMT-VRPAKFMLHG  152 (291)
Q Consensus       138 RPs~~-~v~~~~~L~~  152 (291)
                      ||++. +++....+++
T Consensus       245 R~s~~~~l~~hpff~~  260 (320)
T d1xjda_         245 RLGVRGDIRQHPLFRE  260 (320)
T ss_dssp             SBTTBSCGGGSGGGTT
T ss_pred             CcCHHHHHHhCchhcc
Confidence            99995 7733344544

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.4e-27  Score=205.36  Aligned_cols=130  Identities=23%  Similarity=0.239  Sum_probs=99.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCCCCccccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCD   60 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~~~~~~~D   60 (291)
                      ..++.||+.||+|||+   ++||||||||+|||++.++.                     |+.|||||++.+..++.++|
T Consensus       107 ~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~D  183 (316)
T d1fota_         107 KFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSID  183 (316)
T ss_dssp             HHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHH
T ss_pred             HHHHHHHHHhhhhhcc---CcEEccccCchheeEcCCCCEEEecCccceEeccccccccCcccccCHHHHcCCCCCchhh
Confidence            3578899999999999   99999999999999997754                     88999999999999999999


Q ss_pred             eechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCCC-
Q 022858           61 VRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMP-  139 (291)
Q Consensus        61 v~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-  139 (291)
                      |||+||++|||++|+.||......        .....+..+..          ..+...+..+.+++.+||+.||.+|| 
T Consensus       184 iwSlGvilyemltG~~Pf~~~~~~--------~~~~~i~~~~~----------~~p~~~s~~~~~li~~~L~~dp~~R~~  245 (316)
T d1fota_         184 WWSFGILIYEMLAGYTPFYDSNTM--------KTYEKILNAEL----------RFPPFFNEDVKDLLSRLITRDLSQRLG  245 (316)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHCCC----------CCCTTSCHHHHHHHHHHTCSCTTTCTT
T ss_pred             ccccchhHHHHHhCCCCCCCcCHH--------HHHHHHHcCCC----------CCCCCCCHHHHHHHHHHhhhCHHhccc
Confidence            999999999999999999754321        12222222211          11122335678899999999999996 


Q ss_pred             ----CCCccchhhhhhc
Q 022858          140 ----SMTVRPAKFMLHG  152 (291)
Q Consensus       140 ----s~~~v~~~~~L~~  152 (291)
                          ++.+++....+++
T Consensus       246 ~~r~t~~~il~Hp~f~~  262 (316)
T d1fota_         246 NLQNGTEDVKNHPWFKE  262 (316)
T ss_dssp             SSTTTTHHHHTSGGGSS
T ss_pred             cchhhHHHHHcCccccc
Confidence                6666632333443

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.93  E-value=1.3e-27  Score=208.40  Aligned_cols=126  Identities=21%  Similarity=0.230  Sum_probs=98.3

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccC--CC-----------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK--FW-----------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~--~~-----------------------t~~y~aPE~~~~~~~~   56 (291)
                      ..|+.||+.||+|||+   ++||||||||+|||++.+  +.                       |+.|||||++.+..++
T Consensus       130 ~~i~~qi~~aL~ylH~---~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  206 (352)
T d1koba_         130 INYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVG  206 (352)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBC
T ss_pred             HHHHHHHHHHHHHHHH---CCeeecccccccccccccCCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCC
Confidence            4689999999999999   999999999999999732  21                       8899999999999999


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++||||+||++|||+||+.||.+....        .....+..+...      .........+..+.+|+.+||+.||+
T Consensus       207 ~~~DiwSlGvilyelltG~~Pf~~~~~~--------~~~~~i~~~~~~------~~~~~~~~~s~~~~~li~~~L~~dp~  272 (352)
T d1koba_         207 FYTDMWAIGVLGYVLLSGLSPFAGEDDL--------ETLQNVKRCDWE------FDEDAFSSVSPEAKDFIKNLLQKEPR  272 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHHCCCC------CCSSTTTTSCHHHHHHHHTTSCSSGG
T ss_pred             CccchHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCC------CCcccccCCCHHHHHHHHHHccCChh
Confidence            9999999999999999999999754421        112222222111      00111123346778999999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +|||+.|+
T Consensus       273 ~R~s~~ei  280 (352)
T d1koba_         273 KRLTVHDA  280 (352)
T ss_dssp             GSCCHHHH
T ss_pred             HCcCHHHH
Confidence            99999999

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.7e-27  Score=203.54  Aligned_cols=143  Identities=20%  Similarity=0.222  Sum_probs=99.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ..++.||+.||+|||+   ++|+||||||+|||++.++.                        |+.|+|||++... .++
T Consensus       103 ~~~~~qil~aL~~lH~---~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  179 (299)
T d1ua2a_         103 KAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYG  179 (299)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCC
T ss_pred             HHHHHHHHHHHHHhhc---cceecccCCcceEEecCCCccccccCccccccCCCcccccceecChhhccHHHHccCCCCC
Confidence            4688999999999999   99999999999999987643                        8899999998754 679


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC---ccchh------hhhcccccc-----hHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG---EFQDL------IIVCGMEKN-----NKEKAER  122 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~~-----~~~~~~~  122 (291)
                      .++|||||||++|||++|..||......    .....+.......   .....      ..-......     .......
T Consensus       180 ~~~DiwSlGvil~el~~g~~pf~~~~~~----~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  255 (299)
T d1ua2a_         180 VGVDMWAVGCILAELLLRVPFLPGDSDL----DQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDD  255 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHH
T ss_pred             hhhhhhhcchHHHHHHhCcCCCCCCCHH----HHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHH
Confidence            9999999999999999999999654321    0111111111000   00000      000000000     0122356


Q ss_pred             HHHHHHHccccCCCCCCCCCccchhhhhh
Q 022858          123 MALVALWRVQYKPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       123 ~~~l~~~cl~~~p~~RPs~~~v~~~~~L~  151 (291)
                      +.+++.+||+.||++|||+.|++....+.
T Consensus       256 ~~dll~~~L~~dP~~R~sa~e~L~Hp~f~  284 (299)
T d1ua2a_         256 LLDLIQGLFLFNPCARITATQALKMKYFS  284 (299)
T ss_dssp             HHHHHHHHHCSSTTTSCCHHHHHTSGGGT
T ss_pred             HHHHHHHHccCChhhCcCHHHHhCCHhhC
Confidence            88999999999999999999993223454

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.1e-27  Score=205.70  Aligned_cols=119  Identities=18%  Similarity=0.222  Sum_probs=95.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCCCcc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFPVTH   57 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~~~~   57 (291)
                      ..++.||+.||+|||+   ++||||||||+|||++.++.                        |+.|||||++.+..++.
T Consensus       108 ~~~~~qil~al~ylH~---~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~  184 (337)
T d1o6la_         108 RFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR  184 (337)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCT
T ss_pred             HHHHHHHhhhhhhhhh---cCccccccCHHHeEecCCCCEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCCh
Confidence            3578999999999999   99999999999999997754                        88999999999999999


Q ss_pred             ccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCC
Q 022858           58 KCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEA  137 (291)
Q Consensus        58 ~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (291)
                      ++||||+||++|||++|+.||......        .+...+..+..          ..+......+.+++.+||+.||.+
T Consensus       185 ~~DiwSlGvilyeml~G~~pf~~~~~~--------~~~~~i~~~~~----------~~p~~~s~~~~dli~~~L~~dP~~  246 (337)
T d1o6la_         185 AVDWWGLGVVMYEMMCGRLPFYNQDHE--------RLFELILMEEI----------RFPRTLSPEAKSLLAGLLKKDPKQ  246 (337)
T ss_dssp             THHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC----------CCCTTSCHHHHHHHHHHTCSSTTT
T ss_pred             hhcccchhhHHHHHHHCCCCCCCcCHH--------HHHHHHhcCCC----------CCCccCCHHHHHHHHhhccCCchh
Confidence            999999999999999999999765431        12222222221          111223456788999999999999


Q ss_pred             CCCC
Q 022858          138 MPSM  141 (291)
Q Consensus       138 RPs~  141 (291)
                      ||+.
T Consensus       247 R~~~  250 (337)
T d1o6la_         247 RLGG  250 (337)
T ss_dssp             STTC
T ss_pred             hccc
Confidence            9974

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=2.9e-27  Score=207.11  Aligned_cols=122  Identities=20%  Similarity=0.191  Sum_probs=94.1

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------CCccccCccccC-CCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------TPGYAAPETWMS-FPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------t~~y~aPE~~~~-~~~~~~   58 (291)
                      ..|+.||+.||+|||+   ++||||||||+|||++.++.                      |+.|||||++.. ..++.+
T Consensus       110 ~~~~~qi~~aL~ylH~---~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~  186 (364)
T d1omwa3         110 RFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSS  186 (364)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTH
T ss_pred             HHHHHHHHHHHHHHHH---CCccceeeccceeEEcCCCcEEEeeeceeeecCCCcccccccccccchhHHhhcCCCCCcc
Confidence            4688999999999999   99999999999999987653                      899999999875 568999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCCCC
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAM  138 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (291)
                      +|||||||++|||+||+.||.......     ...+........          ...+...+..+.+++.+||+.||++|
T Consensus       187 ~DiwSlGvilyemltG~~Pf~~~~~~~-----~~~~~~~~~~~~----------~~~~~~~s~~~~~li~~~L~~dP~~R  251 (364)
T d1omwa3         187 ADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHEIDRMTLTMA----------VELPDSFSPELRSLLEGLLQRDVNRR  251 (364)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCSSCSSC-----HHHHHHHSSSCC----------CCCCSSSCHHHHHHHHHHTCSSTTTS
T ss_pred             cchhHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHhcccCC----------CCCCCCCCHHHHHHHHHHcccCHHHh
Confidence            999999999999999999997654321     111111111110          01111234568899999999999999


Q ss_pred             CCC
Q 022858          139 PSM  141 (291)
Q Consensus       139 Ps~  141 (291)
                      ||+
T Consensus       252 ~t~  254 (364)
T d1omwa3         252 LGC  254 (364)
T ss_dssp             TTT
T ss_pred             CCC
Confidence            995

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1e-26  Score=202.86  Aligned_cols=150  Identities=18%  Similarity=0.129  Sum_probs=101.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccC-CCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMS-FPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~-~~~~   56 (291)
                      ..|+.||+.||+|||+   ++|+||||||+|||++.++.                        ++.|+|||.+.+ ..++
T Consensus       125 ~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  201 (350)
T d1q5ka_         125 KLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYT  201 (350)
T ss_dssp             HHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCC
T ss_pred             HHHHHHHHHHHHHHHh---cCCcccCCCcceEEEecCCCceeEecccchhhccCCcccccccccccccChHHhhcccCCC
Confidence            3688999999999999   99999999999999986642                        789999998875 4789


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCch--------hHHHHHHh---hcCccchhhhhcccccchHHHHHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSG--------FKWVWKKL---EKGEFQDLIIVCGMEKNNKEKAERMAL  125 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~--------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (291)
                      .++||||+||++|||++|+.||............        .++.....   ....+...................+.+
T Consensus       202 ~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d  281 (350)
T d1q5ka_         202 SSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIA  281 (350)
T ss_dssp             THHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHH
T ss_pred             cceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHH
Confidence            9999999999999999999999654421100000        00000000   000000000000001111223456788


Q ss_pred             HHHHccccCCCCCCCCCccchhhhhhccc
Q 022858          126 VALWRVQYKPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v~~~~~L~~~~  154 (291)
                      |+.+||+.||++|||+.|+.....+++..
T Consensus       282 Ll~~mL~~dP~~R~ta~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         282 LCSRLLEYTPTARLTPLEACAHSFFDELR  310 (350)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred             HHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence            99999999999999999993334565543

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=7.7e-27  Score=201.14  Aligned_cols=126  Identities=20%  Similarity=0.225  Sum_probs=98.2

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCCCCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSFPVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~~~~   56 (291)
                      ..|+.||+.||+|||+   ++|+||||||+|||++.+..                         ++.|+|||.+.+..++
T Consensus       105 ~~i~~qi~~al~yLH~---~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~  181 (321)
T d1tkia_         105 VSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVS  181 (321)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEEC
T ss_pred             HHHHHHHHHHHHHHHH---cCCCcccccccceeecCCCceEEEEcccchhhccccCCcccccccccccccchhccCCCCC
Confidence            4688999999999999   99999999999999975431                         8899999999999999


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccCCC
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPE  136 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (291)
                      .++||||+||++|||++|..||......        .+...+..+...-.      ..........+.+++.+||+.||+
T Consensus       182 ~~~DiWSlGvily~ll~G~~Pf~~~~~~--------~~~~~i~~~~~~~~------~~~~~~~s~~~~~li~~~L~~dp~  247 (321)
T d1tkia_         182 TATDMWSLGTLVYVLLSGINPFLAETNQ--------QIIENIMNAEYTFD------EEAFKEISIEAMDFVDRLLVKERK  247 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCCCCC------HHHHTTSCHHHHHHHHTTSCSSGG
T ss_pred             chhhcccHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCC------hhhccCCCHHHHHHHHHHccCChh
Confidence            9999999999999999999999765421        12222222211100      000112345678999999999999


Q ss_pred             CCCCCCcc
Q 022858          137 AMPSMTVR  144 (291)
Q Consensus       137 ~RPs~~~v  144 (291)
                      +|||+.|+
T Consensus       248 ~R~s~~ei  255 (321)
T d1tkia_         248 SRMTASEA  255 (321)
T ss_dssp             GSCCHHHH
T ss_pred             HCcCHHHH
Confidence            99999999

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.92  E-value=1.6e-26  Score=195.03  Aligned_cols=126  Identities=23%  Similarity=0.286  Sum_probs=97.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccC------
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMS------   52 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~------   52 (291)
                      ..++.||+.||+|||+   ++|+||||||+|||++.++.                       |+.|+|||.+.+      
T Consensus       113 ~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~  189 (277)
T d1phka_         113 RKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNH  189 (277)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTS
T ss_pred             HHHHHHHHHHHHHHHH---cCCcccccccceEEEcCCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccC
Confidence            4689999999999999   99999999999999987653                       789999999863      


Q ss_pred             CCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccc
Q 022858           53 FPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQ  132 (291)
Q Consensus        53 ~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  132 (291)
                      ..++.++||||+||++|||++|+.||......        .....+..+....      ..+.....+..+.+++.+||+
T Consensus       190 ~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~--------~~~~~i~~~~~~~------~~~~~~~~s~~~~~li~~~L~  255 (277)
T d1phka_         190 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--------LMLRMIMSGNYQF------GSPEWDDYSDTVKDLVSRFLV  255 (277)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCC------CTTTGGGSCHHHHHHHHHHCC
T ss_pred             CCCCchheEcccchhhhhhccCCCCCCCCCHH--------HHHHHHHhCCCCC------CCcccccCCHHHHHHHHHHcc
Confidence            35788999999999999999999999755421        1222232222110      111122344678899999999


Q ss_pred             cCCCCCCCCCcc
Q 022858          133 YKPEAMPSMTVR  144 (291)
Q Consensus       133 ~~p~~RPs~~~v  144 (291)
                      .||++|||+.|+
T Consensus       256 ~~p~~R~s~~ei  267 (277)
T d1phka_         256 VQPQKRYTAEEA  267 (277)
T ss_dssp             SSGGGSCCHHHH
T ss_pred             CChhHCcCHHHH
Confidence            999999999998

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.9e-27  Score=201.99  Aligned_cols=145  Identities=17%  Similarity=0.227  Sum_probs=99.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCC-Cc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFP-VT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~-~~   56 (291)
                      ..++.|++.||+|||+   .+||||||||+|||++.+..                        |+.|+|||.+.... ++
T Consensus       105 ~~~~~qil~~L~yLH~---~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~  181 (298)
T d1gz8a_         105 KSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS  181 (298)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCC
T ss_pred             HHHHHHHHHHHHHhhc---CCEEccccCchheeecccCcceeccCCcceeccCCcccceeecccceeeehhhhccccCCC
Confidence            4689999999999999   99999999999999986643                        88999999887665 57


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---Cccchhhh--------hcccccc----hHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---GEFQDLII--------VCGMEKN----NKEKAE  121 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--------~~~~~~~----~~~~~~  121 (291)
                      .++||||+||++|||++|+.||.......    ....+......   ........        +......    ......
T Consensus       182 ~~~DiwSlGvily~m~~G~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  257 (298)
T d1gz8a_         182 TAVDIWSLGCIFAEMVTRRALFPGDSEID----QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE  257 (298)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCH
T ss_pred             ccccccccchhhhHHhhCCCCCCCCCHHH----HHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCH
Confidence            89999999999999999999997543210    00000000000   00000000        0000000    112235


Q ss_pred             HHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          122 RMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       122 ~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      .+.+++.+||+.||++|||+.|++....++++
T Consensus       258 ~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~  289 (298)
T d1gz8a_         258 DGRSLLSQMLHYDPNKRISAKAALAHPFFQDV  289 (298)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence            67889999999999999999999333345544

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.92  E-value=1e-26  Score=197.33  Aligned_cols=136  Identities=17%  Similarity=0.213  Sum_probs=96.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ..|+.||+.||+|||+   .+||||||||+|||++.++.                        ++.|+|||.+.+. .++
T Consensus       103 ~~i~~qi~~~L~~LH~---~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~  179 (286)
T d1ob3a_         103 KSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS  179 (286)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCC
T ss_pred             HHHHHHHHHHHHHhcc---CcEEecCCCCceeeEcCCCCEEecccccceecccCccccceecccchhhhHHHHhCCCCCC
Confidence            4689999999999999   99999999999999987754                        7789999998764 578


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcC---ccchhh------------hhcccccchHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKG---EFQDLI------------IVCGMEKNNKEKAE  121 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------------~~~~~~~~~~~~~~  121 (291)
                      .++||||+||++|||++|+.||......+    ....+.......   ......            .+............
T Consensus       180 ~~~DiwslGv~l~el~~G~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  255 (286)
T d1ob3a_         180 TTIDIWSVGCIFAEMVNGTPLFPGVSEAD----QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDE  255 (286)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCH
T ss_pred             cceeehhcCcHHHHHHHCCCCCCCCCHHH----HHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCH
Confidence            99999999999999999999997543210    111111110000   000000            00000111122245


Q ss_pred             HHHHHHHHccccCCCCCCCCCcc
Q 022858          122 RMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       122 ~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .+.+++.+||+.||++|||+.|+
T Consensus       256 ~~~dli~~~L~~dP~~R~s~~el  278 (286)
T d1ob3a_         256 SGIDLLSKMLKLDPNQRITAKQA  278 (286)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHH
Confidence            77899999999999999999998

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.92  E-value=1.5e-26  Score=197.05  Aligned_cols=138  Identities=15%  Similarity=0.179  Sum_probs=101.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCC------------------------------------CCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------------------WTPGYA   45 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~------------------------------------~t~~y~   45 (291)
                      +.|+.|++.||+|||+   .+||||||||+|||++.+.                                    +|+.||
T Consensus       104 ~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~  180 (293)
T d1csna_         104 AMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYM  180 (293)
T ss_dssp             HHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTC
T ss_pred             HHHHHHHHHHHHHHHH---CCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhc
Confidence            5689999999999999   9999999999999996321                                    178999


Q ss_pred             cCccccCCCCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHH
Q 022858           46 APETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMAL  125 (291)
Q Consensus        46 aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (291)
                      |||++.+..++.++||||||+++|||++|+.||........ ......+..........         .....++..+.+
T Consensus       181 aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~---------~l~~~~p~~l~~  250 (293)
T d1csna_         181 SINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-KQKYERIGEKKQSTPLR---------ELCAGFPEEFYK  250 (293)
T ss_dssp             CHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-HHHHHHHHHHHHHSCHH---------HHTTTSCHHHHH
T ss_pred             CHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhH-HHHHHHHHhccCCCChH---------HhcCCCCHHHHH
Confidence            99999999999999999999999999999999975543211 00011111111100000         011123467888


Q ss_pred             HHHHccccCCCCCCCCCccchhhhhhccc
Q 022858          126 VALWRVQYKPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       126 l~~~cl~~~p~~RPs~~~v~~~~~L~~~~  154 (291)
                      ++..|++.+|++||+...+  .+.|++..
T Consensus       251 ii~~~~~~~~~~rP~y~~l--~~~l~~~~  277 (293)
T d1csna_         251 YMHYARNLAFDATPDYDYL--QGLFSKVL  277 (293)
T ss_dssp             HHHHHHHCCTTCCCCHHHH--HHHHHHHH
T ss_pred             HHHHHhcCCcccCcCHHHH--HHHHHHHH
Confidence            9999999999999998887  77666654

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.4e-26  Score=196.99  Aligned_cols=136  Identities=14%  Similarity=0.139  Sum_probs=94.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC----------------------------CCccccCccccCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW----------------------------TPGYAAPETWMSF   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~----------------------------t~~y~aPE~~~~~   53 (291)
                      ..|+.|++.||+|||+   .+|+||||||+|||++.++.                            |+.|+|||.+.+.
T Consensus       120 ~~i~~qil~~l~~lH~---~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~  196 (318)
T d3blha1         120 KRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE  196 (318)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHHHhcc---CCEEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCC
Confidence            4688999999999999   99999999999999987643                            7899999998765


Q ss_pred             -CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---C--------ccchhhhh-cccccchH---
Q 022858           54 -PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---G--------EFQDLIIV-CGMEKNNK---  117 (291)
Q Consensus        54 -~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~--------~~~~~~~~-~~~~~~~~---  117 (291)
                       .++.++||||+||++|||++|+.||......    .....+......   .        ........ ........   
T Consensus       197 ~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (318)
T d3blha1         197 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ----HQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRL  272 (318)
T ss_dssp             SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHH
T ss_pred             CCCCcHHHcccCCceeeeHhhCCCCCCCCCHH----HHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhh
Confidence             6899999999999999999999999754321    011111111100   0        00000000 00011111   


Q ss_pred             ---HHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          118 ---EKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       118 ---~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                         .....+.+|+.+||+.||++|||+.|+
T Consensus       273 ~~~~~~~~~~dLl~~mL~~dP~~R~sa~el  302 (318)
T d3blha1         273 KAYVRDPYALDLIDKLLVLDPAQRIDSDDA  302 (318)
T ss_dssp             HHHHCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             ccccCCHHHHHHHHHHCcCChhHCcCHHHH
Confidence               113456789999999999999999999

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.7e-25  Score=194.76  Aligned_cols=136  Identities=18%  Similarity=0.236  Sum_probs=94.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccC-C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMS-F   53 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~-~   53 (291)
                      ..|+.|++.||+|||+   ++||||||||+|||++.++.                           |+.|+|||.+.. .
T Consensus       112 ~~i~~qil~al~yLH~---~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~  188 (345)
T d1pmea_         112 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK  188 (345)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBC
T ss_pred             HHHHHHHHHHHHHHHH---CCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCC
Confidence            4689999999999999   99999999999999987643                           778999999854 5


Q ss_pred             CCccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCc-------c----chhhhh-cccccc-----h
Q 022858           54 PVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGE-------F----QDLIIV-CGMEKN-----N  116 (291)
Q Consensus        54 ~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~-~~~~~~-----~  116 (291)
                      .++.++||||+||++|||++|+.||.......    .............       .    ...... ......     .
T Consensus       189 ~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (345)
T d1pmea_         189 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD----QLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF  264 (345)
T ss_dssp             SCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHC
T ss_pred             CCCchhhhhccCceehHHhhCCCCCCCCCHHH----HHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhC
Confidence            67899999999999999999999996543210    0000000000000       0    000000 000000     0


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          117 KEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       117 ~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      ......+.+++.+||+.||++|||+.|+
T Consensus       265 ~~~s~~~~~li~~~L~~dP~~R~ta~e~  292 (345)
T d1pmea_         265 PNADSKALDLLDKMLTFNPHKRIEVEQA  292 (345)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             CCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            1112467899999999999999999999

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.4e-25  Score=193.80  Aligned_cols=145  Identities=16%  Similarity=0.179  Sum_probs=100.5

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCC-CCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSF-PVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~-~~~~~~   59 (291)
                      ..|+.||+.||+|||+   ++|+||||||+|||++.++.                     |+.|+|||.+.+. .++.++
T Consensus       124 ~~~~~qi~~aL~~LH~---~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~  200 (346)
T d1cm8a_         124 QFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTV  200 (346)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTH
T ss_pred             HHHHHHHHHHHHHHHh---CCCcccccCcchhhcccccccccccccceeccCCccccccccccccCHHHHcCCCCCCccc
Confidence            4689999999999999   99999999999999987754                     8899999998764 578999


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHh--------hcCc----------cchhhhhcccccchHHHHH
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKL--------EKGE----------FQDLIIVCGMEKNNKEKAE  121 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~----------~~~~~~~~~~~~~~~~~~~  121 (291)
                      ||||+||++|||++|+.||.......    .........        ....          ..+.. .............
T Consensus       201 DiwSlGvil~ell~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~  275 (346)
T d1cm8a_         201 DIWSVGCIMAEMITGKTLFKGSDHLD----QLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELE-KKDFASILTNASP  275 (346)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCC-CCCGGGTCTTCCH
T ss_pred             hhhcchHHHHHHHHCcCCCCCCChHH----HHHHHHhccCCCcHHHHhhhcchhhhhhhccCCccc-ccchHHhccCCCH
Confidence            99999999999999999997553210    000000000        0000          00000 0000011112235


Q ss_pred             HHHHHHHHccccCCCCCCCCCccchhhhhhccc
Q 022858          122 RMALVALWRVQYKPEAMPSMTVRPAKFMLHGSL  154 (291)
Q Consensus       122 ~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~~  154 (291)
                      .+.+|+.+||+.||++|||+.|+.....++...
T Consensus       276 ~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         276 LAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             HHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence            677899999999999999999993334566554

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=5.5e-25  Score=192.55  Aligned_cols=149  Identities=22%  Similarity=0.222  Sum_probs=100.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------------CCccccCccccCCC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------------TPGYAAPETWMSFP   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------------t~~y~aPE~~~~~~   54 (291)
                      ..++.||+.||+|||+.  .+|+||||||+|||++.++.                           |+.|+|||++....
T Consensus       128 ~~i~~qil~al~~lh~~--~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~  205 (362)
T d1q8ya_         128 KQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAP  205 (362)
T ss_dssp             HHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHhhh--cCcccccCChhHeeeeccCcccccceeeEeecccccccccccccccccccccChhhccccC
Confidence            46889999999999973  78999999999999974321                           78999999999999


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhh-cCccch----------------------------
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLE-KGEFQD----------------------------  105 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----------------------------  105 (291)
                      ++.++||||+||+++||++|+.||.......... ..+....... -+....                            
T Consensus       206 ~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~-~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (362)
T d1q8ya_         206 WGCGADIWSTACLIFELITGDFLFEPDEGHSYTK-DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFW  284 (362)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCCC---------C-HHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBC
T ss_pred             CCccccccchHHHHHHHHHCCCCCCCCccccccc-hhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCC
Confidence            9999999999999999999999987554321111 1111111000 000000                            


Q ss_pred             -hhh-hcccccchHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          106 -LII-VCGMEKNNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       106 -~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                       ..+ ..............+.+|+.+||+.||.+|||+.|++....+++.
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~  334 (362)
T d1q8ya_         285 PLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  334 (362)
T ss_dssp             CHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             chhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence             000 000112235567889999999999999999999999333346533

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.6e-25  Score=194.27  Aligned_cols=148  Identities=20%  Similarity=0.189  Sum_probs=103.9

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-----------------------CCccccCccccCCCCccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-----------------------TPGYAAPETWMSFPVTHK   58 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-----------------------t~~y~aPE~~~~~~~~~~   58 (291)
                      ..++.||+.||+|||+   .+|+||||||+|||++.+..                       |+.|+|||++.+..++.+
T Consensus       122 ~~~~~qil~gl~~LH~---~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~  198 (355)
T d2b1pa1         122 SYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKEN  198 (355)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC---------------CCTTCCHHHHTTCCCCTT
T ss_pred             HHHHHHHHHHHHHhhh---cccccccCCccccccccccceeeechhhhhccccccccccccccccccChhhhcCCCCCCC
Confidence            4689999999999999   99999999999999997754                       889999999999999999


Q ss_pred             cceechhHHHHHHhhCCCccccccccCCCC---------------chhHHHHHHhhcC------ccchhhhh---ccccc
Q 022858           59 CDVRSFGMLLFEILGRRRMRTCQKARSGFP---------------SGFKWVWKKLEKG------EFQDLIIV---CGMEK  114 (291)
Q Consensus        59 ~Dv~s~G~~l~elltg~~p~~~~~~~~~~~---------------~~~~~~~~~~~~~------~~~~~~~~---~~~~~  114 (291)
                      +||||+||+++||++|+.||..........               .............      ........   .....
T Consensus       199 ~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (355)
T d2b1pa1         199 VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSE  278 (355)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSH
T ss_pred             cccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccccccccccccccccccc
Confidence            999999999999999999996443210000               0000000000000      00000000   01111


Q ss_pred             chHHHHHHHHHHHHHccccCCCCCCCCCccchhhhhhc
Q 022858          115 NNKEKAERMALVALWRVQYKPEAMPSMTVRPAKFMLHG  152 (291)
Q Consensus       115 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~  152 (291)
                      ........+.+|+.+||+.||++|||+.|++....+..
T Consensus       279 ~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~  316 (355)
T d2b1pa1         279 HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  316 (355)
T ss_dssp             HHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             ccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence            23345677899999999999999999999944445554

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.6e-25  Score=190.30  Aligned_cols=144  Identities=13%  Similarity=0.136  Sum_probs=97.6

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCCC-Cc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSFP-VT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~~-~~   56 (291)
                      ..++.|++.||+|||+   ++||||||||+|||++.+..                        ++.|+|||.+.+.. ++
T Consensus       104 ~~~~~q~~~aL~~lH~---~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~  180 (292)
T d1unla_         104 KSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS  180 (292)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCC
T ss_pred             HHHHHHHHHHHHHhhc---CCEeeecccCcccccccCCceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCC
Confidence            4688999999999999   99999999999999986543                        77899999888664 68


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhc---Cccchh------------hhhcccccchHHHHH
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK---GEFQDL------------IIVCGMEKNNKEKAE  121 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------------~~~~~~~~~~~~~~~  121 (291)
                      .++||||+||++|||++|+.||......   ......+......   ......            ...............
T Consensus       181 ~~~DiwSlG~il~ell~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  257 (292)
T d1unla_         181 TSIDMWSAGCIFAELANAGRPLFPGNDV---DDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNA  257 (292)
T ss_dssp             THHHHHHHHHHHHHHTTTSCCSCCCSSH---HHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCH
T ss_pred             chhhccccchHHHHHhhCCCCCCCCCCH---HHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCH
Confidence            9999999999999999999997533221   0011111111100   000000            000011111223345


Q ss_pred             HHHHHHHHccccCCCCCCCCCccchhhhhh
Q 022858          122 RMALVALWRVQYKPEAMPSMTVRPAKFMLH  151 (291)
Q Consensus       122 ~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~  151 (291)
                      .+.+|+.+||+.||.+|||+.|++....++
T Consensus       258 ~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~  287 (292)
T d1unla_         258 TGRDLLQNLLKCNPVQRISAEEALQHPYFS  287 (292)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTTSGGGS
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcChhhc
Confidence            678899999999999999999993223443

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.90  E-value=2.3e-25  Score=192.54  Aligned_cols=137  Identities=13%  Similarity=0.115  Sum_probs=95.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC------------------------CCccccCccccCC-CCc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW------------------------TPGYAAPETWMSF-PVT   56 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~------------------------t~~y~aPE~~~~~-~~~   56 (291)
                      ..|+.||+.||+|||+   ++||||||||+|||++.++.                        |+.|+|||.+.+. .++
T Consensus       132 ~~i~~qil~aL~~LH~---~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  208 (328)
T d3bqca1         132 RFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD  208 (328)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCC
T ss_pred             HHHHHHHHHHHHHHhh---cccccccccccceEEcCCCCeeeecccccceeccCCCcccccccCccccCcccccCCCCCC
Confidence            4689999999999999   99999999999999986542                        7889999998865 579


Q ss_pred             cccceechhHHHHHHhhCCCccccccccCCCCchhHHHHH---------HhhcC---ccchhh-----------hhcccc
Q 022858           57 HKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWK---------KLEKG---EFQDLI-----------IVCGME  113 (291)
Q Consensus        57 ~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~---------~~~~~---~~~~~~-----------~~~~~~  113 (291)
                      .++||||+||++||+++|+.||........   ....+..         .....   ......           ......
T Consensus       209 ~~~DiwslG~~l~e~~~g~~pf~~~~~~~~---~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (328)
T d3bqca1         209 YSLDMWSLGCMLASMIFRKEPFFHGHDNYD---QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS  285 (328)
T ss_dssp             THHHHHHHHHHHHHHHHTCSSSSCCSSHHH---HHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCT
T ss_pred             cccchhhhhhhhHHhccCCCCCCCCchhHH---HHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccc
Confidence            999999999999999999999865432100   0000000         00000   000000           000001


Q ss_pred             cchHHHHHHHHHHHHHccccCCCCCCCCCcc
Q 022858          114 KNNKEKAERMALVALWRVQYKPEAMPSMTVR  144 (291)
Q Consensus       114 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~v  144 (291)
                      .........+.+|+.+||+.||++|||+.|+
T Consensus       286 ~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~  316 (328)
T d3bqca1         286 ENQHLVSPEALDFLDKLLRYDHQSRLTAREA  316 (328)
T ss_dssp             TTGGGCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             cccccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            1112234567899999999999999999999

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.3e-25  Score=190.93  Aligned_cols=123  Identities=22%  Similarity=0.179  Sum_probs=94.0

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC-------------------------CCccccCccccCC--C
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW-------------------------TPGYAAPETWMSF--P   54 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~-------------------------t~~y~aPE~~~~~--~   54 (291)
                      ..++.|++.||+|||+   .+|+||||||+|||++.++.                         ++.|++||.+.+.  .
T Consensus       132 ~~~~~Qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~  208 (322)
T d1vzoa_         132 QIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSG  208 (322)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC--
T ss_pred             HHHHHHHHHHHHHhhc---CCEEeccCCccceeecCCCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcC
Confidence            3578899999999999   99999999999999997754                         8899999998764  4


Q ss_pred             CccccceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchhhhhcccccchHHHHHHHHHHHHHccccC
Q 022858           55 VTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYK  134 (291)
Q Consensus        55 ~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  134 (291)
                      ++.++||||+||++|||++|+.||.......    ....+.......          ..+.+......+.+++.+||+.|
T Consensus       209 ~~~ksDIWSlG~iLyelltG~~PF~~~~~~~----~~~~i~~~~~~~----------~~~~~~~~s~~~~~li~~~l~~d  274 (322)
T d1vzoa_         209 HDKAVDWWSLGVLMYELLTGASPFTVDGEKN----SQAEISRRILKS----------EPPYPQEMSALAKDLIQRLLMKD  274 (322)
T ss_dssp             -CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC----CHHHHHHHHHHC----------CCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             CCchhhhHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcccC----------CCCCcccCCHHHHHHHHHHcccC
Confidence            7889999999999999999999997665432    222222221111          11122334578889999999999


Q ss_pred             CCCCCCC
Q 022858          135 PEAMPSM  141 (291)
Q Consensus       135 p~~RPs~  141 (291)
                      |++|||+
T Consensus       275 P~~R~s~  281 (322)
T d1vzoa_         275 PKKRLGC  281 (322)
T ss_dssp             GGGSTTS
T ss_pred             HHHcCCC
Confidence            9999974

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.2e-24  Score=187.85  Aligned_cols=144  Identities=17%  Similarity=0.194  Sum_probs=98.7

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccCCC---------------------CCccccCccccCC-CCcccc
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSF-PVTHKC   59 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~~~---------------------t~~y~aPE~~~~~-~~~~~~   59 (291)
                      ..|+.||+.||+|||+   ++|+||||||+|||++.++.                     ++.|+|||...+. .++.++
T Consensus       124 ~~i~~qil~aL~~LH~---~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~  200 (348)
T d2gfsa1         124 QFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV  200 (348)
T ss_dssp             HHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTH
T ss_pred             HHHHHHHHHHHHHHHh---CCCcccccCCccccccccccccccccchhcccCcccccccccccccCchhhcCCccCCccc
Confidence            4689999999999999   99999999999999997754                     6789999987765 468899


Q ss_pred             ceechhHHHHHHhhCCCccccccccCCCCchhHHHHHHhhcCccchh------------hhhc-cccc-----chHHHHH
Q 022858           60 DVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEKGEFQDL------------IIVC-GMEK-----NNKEKAE  121 (291)
Q Consensus        60 Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~-~~~~-----~~~~~~~  121 (291)
                      ||||+||++|||++|+.||.......    ....+...... ...+.            .... ....     .......
T Consensus       201 DiwSlGv~l~~ll~g~~pF~~~~~~~----~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  275 (348)
T d2gfsa1         201 DIWSVGCIMAELLTGRTLFPGTDHID----QLKLILRLVGT-PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANP  275 (348)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCC-CCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCH
T ss_pred             chhhhhHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcCC-CChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCH
Confidence            99999999999999999996543210    01111100000 00000            0000 0000     0011235


Q ss_pred             HHHHHHHHccccCCCCCCCCCccchhhhhhcc
Q 022858          122 RMALVALWRVQYKPEAMPSMTVRPAKFMLHGS  153 (291)
Q Consensus       122 ~~~~l~~~cl~~~p~~RPs~~~v~~~~~L~~~  153 (291)
                      .+.+|+.+||+.||.+|||+.|+.....+.+.
T Consensus       276 ~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         276 LAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  307 (348)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHHHHCcCChhhCcCHHHHhcCHhhCCC
Confidence            67889999999999999999999333355543

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.84  E-value=1.7e-10  Score=90.43  Aligned_cols=34  Identities=15%  Similarity=0.209  Sum_probs=31.4

Q ss_pred             hhHHHHHHHHHHHHhcCCCCCeEeecCCCCcEEEccC
Q 022858            2 HIIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK   38 (291)
Q Consensus         2 l~i~~~ia~gL~ylH~~~~~~ivH~Dlkp~NIll~~~   38 (291)
                      .+++.|++.||+|||+   .+|+||||||+|||++.+
T Consensus       106 ~~i~~ql~~~l~~lH~---~giiHrDiKP~NILv~~~  139 (191)
T d1zara2         106 DEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVSEE  139 (191)
T ss_dssp             HHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEETT
T ss_pred             HHHHHHHHHHHHHHhh---CCEEEccCChhheeeeCC
Confidence            3588999999999999   999999999999999865

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.50  E-value=1.1e-05  Score=66.86  Aligned_cols=33  Identities=18%  Similarity=0.229  Sum_probs=27.8

Q ss_pred             cCHHHHHHHhhccc-----------cccccCCCceeEEEEeccc
Q 022858          233 FTSQQLSIATDNFT-----------HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       233 fs~~el~~aT~nF~-----------~~lG~GGfG~VYkG~l~~~  265 (291)
                      |+|+++.+||.+|+           ++||+||||.||+|+...=
T Consensus         7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~   50 (299)
T d1jpaa_           7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLP   50 (299)
T ss_dssp             GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC-
T ss_pred             CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCC
Confidence            68888999999886           3799999999999987543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.00022  Score=58.94  Aligned_cols=22  Identities=18%  Similarity=0.241  Sum_probs=19.3

Q ss_pred             hhccccccccCCCceeEEEEec
Q 022858          242 TDNFTHLLVSGGSGALYKLQRD  263 (291)
Q Consensus       242 T~nF~~~lG~GGfG~VYkG~l~  263 (291)
                      +.+|+++||+||||.||||.+.
T Consensus        28 ~~~~~~~iG~G~fg~Vyk~~~~   49 (311)
T d1r0pa_          28 IVHFNEVIGRGHFGCVYHGTLL   49 (311)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEC
T ss_pred             eeccceEEeecCCeEEEEEEEE
Confidence            5578889999999999999873

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.10  E-value=0.00052  Score=56.31  Aligned_cols=28  Identities=14%  Similarity=0.277  Sum_probs=22.0

Q ss_pred             HHHHHHhhccc--cccccCCCceeEEEEec
Q 022858          236 QQLSIATDNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       236 ~el~~aT~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      .+|..-.++|.  ++||+||||.||+|+..
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~   35 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAP   35 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred             hhccCCHHHcEEeEEEeeCCCeEEEEEEEC
Confidence            33444567787  89999999999999864

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.56  E-value=0.0016  Score=52.45  Aligned_cols=17  Identities=18%  Similarity=0.163  Sum_probs=15.6

Q ss_pred             cccccCCCceeEEEEec
Q 022858          247 HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~  263 (291)
                      ++||+||||.||+|.+.
T Consensus        19 ~~iG~G~fg~Vy~~~~~   35 (272)
T d1qpca_          19 ERLGAGQFGEVWMGYYN   35 (272)
T ss_dssp             EEEEEETTEEEEEEEET
T ss_pred             EEEecCCCcEEEEEEEC
Confidence            78999999999999864

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.41  E-value=0.0027  Score=51.47  Aligned_cols=22  Identities=27%  Similarity=0.327  Sum_probs=18.3

Q ss_pred             hccc--cccccCCCceeEEEEecc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      ++|.  ++||+||||.||+|+...
T Consensus        17 ~~~~~~~~iG~G~fg~Vy~a~~~~   40 (287)
T d1opja_          17 TDITMKHKLGGGQYGEVYEGVWKK   40 (287)
T ss_dssp             GGEEEEEETTTTTTSSEEEEEEGG
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECC
Confidence            3455  899999999999998754

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.0029  Score=51.80  Aligned_cols=18  Identities=22%  Similarity=0.158  Sum_probs=15.9

Q ss_pred             cccccCCCceeEEEEecc
Q 022858          247 HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~  264 (291)
                      .+||+||||.||+|....
T Consensus        26 ~~lG~G~fG~Vy~a~~~~   43 (308)
T d1p4oa_          26 RELGQGSFGMVYEGVAKG   43 (308)
T ss_dssp             EEEEECSSSEEEEEEEEE
T ss_pred             eEEeeCCCeEEEEEEECC
Confidence            789999999999998743

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.11  E-value=0.0034  Score=50.84  Aligned_cols=20  Identities=15%  Similarity=0.145  Sum_probs=17.2

Q ss_pred             ccc--cccccCCCceeEEEEec
Q 022858          244 NFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ++.  ++||+||||.||+|..+
T Consensus        18 ~~~i~~~iG~G~fg~Vy~~~~~   39 (285)
T d1fmka3          18 SLRLEVKLGQGCFGEVWMGTWN   39 (285)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET
T ss_pred             HEEEeeEEeeCCCeEEEEEEEC
Confidence            455  89999999999999864

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.0036  Score=50.91  Aligned_cols=19  Identities=16%  Similarity=-0.008  Sum_probs=16.6

Q ss_pred             cccccCCCceeEEEEeccc
Q 022858          247 HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~  265 (291)
                      ++||+||||.||||....-
T Consensus        19 ~~iG~G~fG~Vy~a~~~~~   37 (299)
T d1ywna1          19 KPLGRGAFGQVIEADAFGI   37 (299)
T ss_dssp             EEEEECSSCEEEEEEEEST
T ss_pred             eEEeecCCeEEEEEEEcCC
Confidence            8999999999999987543

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.93  E-value=0.004  Score=51.35  Aligned_cols=24  Identities=21%  Similarity=0.213  Sum_probs=19.0

Q ss_pred             hccc--cccccCCCceeEEEEecccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      ++|.  .+||+||||.||+|.....+
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~   62 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGIS   62 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCS
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCC
Confidence            3455  89999999999999875443

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.50  E-value=0.0052  Score=50.34  Aligned_cols=23  Identities=22%  Similarity=0.185  Sum_probs=18.5

Q ss_pred             ccc--cccccCCCceeEEEEecccc
Q 022858          244 NFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      .|.  ++||+||||.||+|+-..-+
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~   40 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNS   40 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTT
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCC
Confidence            366  78999999999999865433

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.30  E-value=0.0065  Score=49.64  Aligned_cols=22  Identities=18%  Similarity=0.205  Sum_probs=18.1

Q ss_pred             cccccccCCCceeEEEEecccc
Q 022858          245 FTHLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       245 F~~~lG~GGfG~VYkG~l~~~~  266 (291)
                      |.++||+||||.||+|....-+
T Consensus        14 ~~~~iG~G~fg~Vy~~~~~~~~   35 (309)
T d1fvra_          14 FQDVIGEGNFGQVLKARIKKDG   35 (309)
T ss_dssp             EEEEEECGGGCEEEEEEEEETT
T ss_pred             EEEEEeeCCCcEEEEEEECCCC
Confidence            4478999999999999886543

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.24  E-value=0.0062  Score=49.82  Aligned_cols=18  Identities=17%  Similarity=0.147  Sum_probs=16.0

Q ss_pred             ccccccCCCceeEEEEec
Q 022858          246 THLLVSGGSGALYKLQRD  263 (291)
Q Consensus       246 ~~~lG~GGfG~VYkG~l~  263 (291)
                      .++||+||||.||+|++.
T Consensus        28 ~~~iG~G~fg~Vy~a~~~   45 (311)
T d1t46a_          28 GKTLGAGAFGKVVEATAY   45 (311)
T ss_dssp             EEEEEECSSEEEEEEEEE
T ss_pred             eeEEeecCCeEEEEEEEe
Confidence            378999999999999874

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.22  E-value=0.0063  Score=50.09  Aligned_cols=20  Identities=25%  Similarity=0.670  Sum_probs=17.7

Q ss_pred             hccc--cccccCCCceeEEEEe
Q 022858          243 DNFT--HLLVSGGSGALYKLQR  262 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l  262 (291)
                      ++|.  .+||+||||.||+++-
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~   45 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRK   45 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEE
T ss_pred             hceEEEEEEecCCCeEEEEEEE
Confidence            6677  8999999999999975

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=94.09  E-value=0.0071  Score=49.74  Aligned_cols=21  Identities=14%  Similarity=0.264  Sum_probs=18.1

Q ss_pred             hccc--cccccCCCceeEEEEec
Q 022858          243 DNFT--HLLVSGGSGALYKLQRD  263 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~  263 (291)
                      ++|.  .+||+|+||.||+++-.
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~   57 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINI   57 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET
T ss_pred             cCeEEEEEEecCcCeEEEEEEEC
Confidence            5677  89999999999999854

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.81  E-value=0.0089  Score=48.52  Aligned_cols=19  Identities=16%  Similarity=-0.020  Sum_probs=11.4

Q ss_pred             cccccCCCceeEEEEeccc
Q 022858          247 HLLVSGGSGALYKLQRDFW  265 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~  265 (291)
                      ..||+||||.||+|+....
T Consensus        19 ~~iG~G~fg~Vy~~~~~~~   37 (299)
T d1fgka_          19 KPLGEGAFGQVVLAEAIGL   37 (299)
T ss_dssp             EECC-----CEEEEEEECC
T ss_pred             eEEeecCCcEEEEEEEcCC
Confidence            7899999999999986544

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.72  E-value=0.017  Score=46.72  Aligned_cols=23  Identities=22%  Similarity=0.297  Sum_probs=18.2

Q ss_pred             ccc--cccccCCCceeEEEEecccc
Q 022858          244 NFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      .|.  .+||+||||.||+++-..-+
T Consensus        21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~   45 (293)
T d1yhwa1          21 KYTRFEKIGQGASGTVYTAMDVATG   45 (293)
T ss_dssp             TBCSCEECCCSSSCEEEEEEBTTTC
T ss_pred             ccEEEEEEecCcCcEEEEEEECCCC
Confidence            355  78999999999999865443

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.35  E-value=0.01  Score=48.00  Aligned_cols=21  Identities=29%  Similarity=0.223  Sum_probs=17.5

Q ss_pred             cccccCCCceeEEEEeccccc
Q 022858          247 HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .+||+||||.||+|+-..-+.
T Consensus        18 ~~iG~G~fg~Vy~~~~~~~~~   38 (288)
T d2jfla1          18 GELGDGAFGKVYKAQNKETSV   38 (288)
T ss_dssp             EEEEEETTEEEEEEEETTTCC
T ss_pred             EEEeeCCCcEEEEEEECCCCe
Confidence            789999999999998755444

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.20  E-value=0.014  Score=48.48  Aligned_cols=22  Identities=14%  Similarity=0.252  Sum_probs=15.8

Q ss_pred             hccc--cccccCCCceeEEEEecc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~  264 (291)
                      +.|.  ++||+||||.||+|+-..
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~   40 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAV   40 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETT
T ss_pred             CCeEEEEEeecCcCeEEEEEEECC
Confidence            3455  799999999999998543

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.19  E-value=0.016  Score=47.82  Aligned_cols=26  Identities=12%  Similarity=0.091  Sum_probs=19.5

Q ss_pred             hccc--cccccCCCceeEEEEecccccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQN  268 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~~  268 (291)
                      +.|.  .+||+||||.||+++-..=++.
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~   45 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDTKTGLR   45 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEETTTTEE
T ss_pred             CCeEEEEEEecCCCeEEEEEEECCCCCE
Confidence            3455  7899999999999975543443

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=93.14  E-value=0.015  Score=48.33  Aligned_cols=25  Identities=16%  Similarity=0.267  Sum_probs=19.5

Q ss_pred             hccc--cccccCCCceeEEEEeccccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ++|.  ..||+||||.||+++-..=++
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~   52 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGN   52 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCC
Confidence            4566  789999999999998654333

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.09  E-value=0.02  Score=47.53  Aligned_cols=25  Identities=20%  Similarity=0.275  Sum_probs=20.2

Q ss_pred             hccc--cccccCCCceeEEEEeccccc
Q 022858          243 DNFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       243 ~nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      ++|.  .+||+|+||.||+++-..-+.
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~   67 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGN   67 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCC
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCC
Confidence            5677  899999999999998755443

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.92  E-value=0.016  Score=48.00  Aligned_cols=18  Identities=17%  Similarity=0.283  Sum_probs=15.9

Q ss_pred             cccccCCCceeEEEEecc
Q 022858          247 HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~  264 (291)
                      ++||+||||.||+++-..
T Consensus        26 k~LG~G~fg~Vy~a~~~~   43 (350)
T d1q5ka_          26 KVIGNGSFGVVYQAKLCD   43 (350)
T ss_dssp             EEEEEETTEEEEEEEETT
T ss_pred             eEEeeCcCeEEEEEEECC
Confidence            689999999999998654

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.72  E-value=0.023  Score=46.30  Aligned_cols=24  Identities=17%  Similarity=0.162  Sum_probs=18.2

Q ss_pred             cccccCCCceeEEEEeccccccee
Q 022858          247 HLLVSGGSGALYKLQRDFWQQNQC  270 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~~~~~~~  270 (291)
                      ++||+|+||.||+++-..=++.-.
T Consensus        16 ~~LG~G~fg~Vy~a~~~~~~~~vA   39 (318)
T d3blha1          16 AKIGQGTFGEVFKARHRKTGQKVA   39 (318)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEE
T ss_pred             EEEecCcCeEEEEEEECCCCCEEE
Confidence            589999999999998654444333

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.55  E-value=0.023  Score=45.76  Aligned_cols=23  Identities=17%  Similarity=-0.062  Sum_probs=18.1

Q ss_pred             cccccccCCCceeEEEEeccccc
Q 022858          245 FTHLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       245 F~~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      +.+.||+||||.||+++-..-++
T Consensus        14 ~~~~lG~G~fg~Vy~~~~~~~~~   36 (293)
T d1jksa_          14 TGEELGSGQFAVVKKCREKSTGL   36 (293)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCC
T ss_pred             EeEEEecCCCeEEEEEEECCCCC
Confidence            34689999999999998754444

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.46  E-value=0.022  Score=47.02  Aligned_cols=24  Identities=17%  Similarity=0.101  Sum_probs=12.4

Q ss_pred             ccc--cccccCCCceeEEEEeccccc
Q 022858          244 NFT--HLLVSGGSGALYKLQRDFWQQ  267 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~~~~  267 (291)
                      .|.  .+||+||||.||+++-..=++
T Consensus        19 ~Y~~i~~lG~G~fg~V~~~~~~~~~~   44 (346)
T d1cm8a_          19 VYRDLQPVGSGAYGAVCSAVDGRTGA   44 (346)
T ss_dssp             SEEEEEEC------CEEEEEETTTCC
T ss_pred             cEEEEEEEecCCCeEEEEEEECCCCC
Confidence            455  789999999999998544333

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=92.37  E-value=0.016  Score=48.23  Aligned_cols=23  Identities=17%  Similarity=0.127  Sum_probs=18.2

Q ss_pred             ccc--cccccCCCceeEEEEecccc
Q 022858          244 NFT--HLLVSGGSGALYKLQRDFWQ  266 (291)
Q Consensus       244 nF~--~~lG~GGfG~VYkG~l~~~~  266 (291)
                      +|.  .+||+||||.||+++-..-+
T Consensus        30 ~Y~i~~~lG~G~fg~V~~a~~~~~~   54 (352)
T d1koba_          30 YYDILEELGSGAFGVVHRCVEKATG   54 (352)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCC
Confidence            455  79999999999999854433

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.65  E-value=0.023  Score=46.99  Aligned_cols=18  Identities=11%  Similarity=0.006  Sum_probs=15.8

Q ss_pred             cccccCCCceeEEEEecc
Q 022858          247 HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~  264 (291)
                      .+||+||||.||+|+-..
T Consensus        19 ~~LG~G~fg~Vy~~~~~~   36 (362)
T d1q8ya_          19 RKLGWGHFSTVWLAKDMV   36 (362)
T ss_dssp             EEEEECSSEEEEEEEETT
T ss_pred             EEEeeCCCeEEEEEEECC
Confidence            799999999999998543

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.30  E-value=0.04  Score=45.28  Aligned_cols=18  Identities=17%  Similarity=0.222  Sum_probs=15.2

Q ss_pred             cccccCCCceeEEEEecc
Q 022858          247 HLLVSGGSGALYKLQRDF  264 (291)
Q Consensus       247 ~~lG~GGfG~VYkG~l~~  264 (291)
                      ..||+||||.||+++-..
T Consensus        18 ~~lG~G~fg~Vy~a~~~~   35 (335)
T d2ozaa1          18 QVLGLGINGKVLQIFNKR   35 (335)
T ss_dssp             EEEEECSSCEEEEEEETT
T ss_pred             EEeeeccCeEEEEEEECC
Confidence            359999999999998644